Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62882.t1 | XP_013457621.1 | 98.3 | 770 | 13 | 0 | 1 | 770 | 1 | 770 | 0.00E+00 | 1509.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62882.t1 | Q940Y1 | 68.1 | 772 | 186 | 12 | 1 | 765 | 1 | 719 | 4.3e-298 | 1025.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62882.t1 | A0A072UPM8 | 98.3 | 770 | 13 | 0 | 1 | 770 | 1 | 770 | 0.0e+00 | 1509.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene070510 | MS.gene62882 | PPI |
MS.gene81622 | MS.gene62882 | PPI |
MS.gene62882 | MS.gene016758 | PPI |
MS.gene016743 | MS.gene62882 | PPI |
MS.gene37911 | MS.gene62882 | PPI |
MS.gene62882 | MS.gene070511 | PPI |
MS.gene057883 | MS.gene62882 | PPI |
MS.gene62882 | MS.gene67840 | PPI |
MS.gene81620 | MS.gene62882 | PPI |
MS.gene070505 | MS.gene62882 | PPI |
MS.gene057886 | MS.gene62882 | PPI |
MS.gene070509 | MS.gene62882 | PPI |
MS.gene62882 | MS.gene057884 | PPI |
MS.gene070507 | MS.gene62882 | PPI |
MS.gene81615 | MS.gene62882 | PPI |
MS.gene62882 | MS.gene81617 | PPI |
MS.gene62882 | MS.gene070503 | PPI |
MS.gene070492 | MS.gene62882 | PPI |
MS.gene016742 | MS.gene62882 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62882.t1 | MTR_4g101410 | 98.312 | 770 | 13 | 0 | 1 | 770 | 1 | 770 | 0.0 | 1579 |
MS.gene62882.t1 | MTR_4g101410 | 98.516 | 539 | 8 | 0 | 232 | 770 | 1 | 539 | 0.0 | 1119 |
MS.gene62882.t1 | MTR_3g073040 | 54.419 | 792 | 303 | 12 | 6 | 759 | 1 | 772 | 0.0 | 841 |
MS.gene62882.t1 | MTR_3g073040 | 54.293 | 792 | 303 | 13 | 6 | 759 | 1 | 771 | 0.0 | 835 |
MS.gene62882.t1 | MTR_5g459350 | 57.462 | 717 | 284 | 10 | 55 | 765 | 52 | 753 | 0.0 | 793 |
MS.gene62882.t1 | MTR_3g086340 | 54.698 | 713 | 306 | 9 | 58 | 758 | 95 | 802 | 0.0 | 778 |
MS.gene62882.t1 | MTR_3g097270 | 54.357 | 723 | 282 | 12 | 55 | 766 | 73 | 758 | 0.0 | 774 |
MS.gene62882.t1 | MTR_3g073040 | 51.501 | 633 | 250 | 11 | 6 | 601 | 1 | 613 | 0.0 | 620 |
MS.gene62882.t1 | MTR_3g086340 | 53.176 | 551 | 245 | 5 | 58 | 598 | 95 | 642 | 0.0 | 582 |
MS.gene62882.t1 | MTR_4g064110 | 32.626 | 377 | 229 | 12 | 393 | 754 | 71 | 437 | 3.30e-45 | 169 |
MS.gene62882.t1 | MTR_7g061830 | 33.245 | 376 | 228 | 11 | 391 | 752 | 73 | 439 | 1.11e-43 | 164 |
MS.gene62882.t1 | MTR_4g115490 | 54.000 | 100 | 21 | 4 | 379 | 476 | 74 | 150 | 1.13e-18 | 87.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62882.t1 | AT4G22540 | 68.912 | 772 | 180 | 12 | 1 | 765 | 1 | 719 | 0.0 | 1078 |
MS.gene62882.t1 | AT4G22540 | 68.912 | 772 | 180 | 12 | 1 | 765 | 1 | 719 | 0.0 | 1078 |
MS.gene62882.t1 | AT4G12460 | 66.532 | 741 | 190 | 9 | 31 | 765 | 3 | 691 | 0.0 | 1011 |
MS.gene62882.t1 | AT4G12460 | 66.532 | 741 | 190 | 9 | 31 | 765 | 3 | 691 | 0.0 | 1011 |
MS.gene62882.t1 | AT4G12460 | 66.442 | 742 | 190 | 10 | 31 | 765 | 3 | 692 | 0.0 | 1008 |
MS.gene62882.t1 | AT4G12460 | 65.331 | 649 | 167 | 9 | 31 | 673 | 3 | 599 | 0.0 | 858 |
MS.gene62882.t1 | AT4G12460 | 65.231 | 650 | 167 | 10 | 31 | 673 | 3 | 600 | 0.0 | 853 |
MS.gene62882.t1 | AT4G08180 | 58.815 | 709 | 280 | 6 | 55 | 759 | 106 | 806 | 0.0 | 843 |
MS.gene62882.t1 | AT4G08180 | 58.815 | 709 | 280 | 6 | 55 | 759 | 106 | 806 | 0.0 | 843 |
MS.gene62882.t1 | AT4G08180 | 58.815 | 709 | 279 | 7 | 55 | 759 | 106 | 805 | 0.0 | 838 |
MS.gene62882.t1 | AT4G08180 | 58.533 | 709 | 281 | 7 | 55 | 759 | 106 | 805 | 0.0 | 833 |
MS.gene62882.t1 | AT2G31020 | 52.651 | 811 | 297 | 14 | 6 | 763 | 1 | 777 | 0.0 | 810 |
MS.gene62882.t1 | AT4G22540 | 70.513 | 546 | 121 | 5 | 221 | 765 | 2 | 508 | 0.0 | 809 |
MS.gene62882.t1 | AT4G22540 | 70.513 | 546 | 121 | 5 | 221 | 765 | 2 | 508 | 0.0 | 809 |
MS.gene62882.t1 | AT4G22540 | 70.513 | 546 | 121 | 5 | 221 | 765 | 2 | 508 | 0.0 | 809 |
MS.gene62882.t1 | AT4G22540 | 70.513 | 546 | 121 | 5 | 221 | 765 | 2 | 508 | 0.0 | 809 |
MS.gene62882.t1 | AT4G12460 | 68.440 | 545 | 129 | 4 | 221 | 765 | 2 | 503 | 0.0 | 788 |
MS.gene62882.t1 | AT4G12460 | 68.440 | 545 | 129 | 4 | 221 | 765 | 2 | 503 | 0.0 | 788 |
MS.gene62882.t1 | AT4G12460 | 68.440 | 545 | 129 | 4 | 221 | 765 | 2 | 503 | 0.0 | 788 |
MS.gene62882.t1 | AT1G13170 | 54.420 | 724 | 308 | 9 | 50 | 761 | 90 | 803 | 0.0 | 788 |
MS.gene62882.t1 | AT1G13170 | 52.886 | 745 | 308 | 10 | 50 | 761 | 90 | 824 | 0.0 | 774 |
MS.gene62882.t1 | AT4G12460 | 78.706 | 371 | 71 | 2 | 395 | 765 | 1 | 363 | 0.0 | 640 |
MS.gene62882.t1 | AT2G31030 | 68.613 | 411 | 123 | 1 | 350 | 760 | 85 | 489 | 0.0 | 610 |
MS.gene62882.t1 | AT3G09300 | 34.232 | 371 | 217 | 13 | 393 | 747 | 75 | 434 | 1.28e-47 | 176 |
MS.gene62882.t1 | AT5G02100 | 33.065 | 372 | 220 | 12 | 393 | 747 | 43 | 402 | 2.68e-46 | 171 |
MS.gene62882.t1 | AT5G02100 | 33.065 | 372 | 220 | 12 | 393 | 747 | 70 | 429 | 3.58e-46 | 171 |
MS.gene62882.t1 | AT5G59420 | 32.880 | 368 | 224 | 11 | 391 | 744 | 68 | 426 | 2.45e-43 | 163 |
MS.gene62882.t1 | AT1G77730 | 35.242 | 227 | 136 | 4 | 48 | 272 | 47 | 264 | 5.94e-41 | 151 |
MS.gene62882.t1 | AT5G02100 | 33.333 | 243 | 154 | 6 | 393 | 632 | 70 | 307 | 6.84e-32 | 127 |
Find 202 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGCTGCCTTTGCTGTTTC+TGG | 0.052254 | 8.1:+22138943 | MS.gene62882:CDS |
AAAATCCATTCTTTGTTAAT+TGG | 0.181482 | 8.1:-22136837 | None:intergenic |
TGAAATTCACCAAATATATC+TGG | 0.207215 | 8.1:-22142600 | None:intergenic |
TTCCCCTAACAAGGGATTAA+AGG | 0.210036 | 8.1:-22138998 | None:intergenic |
TTCGATATACTGGTGGATAT+TGG | 0.234820 | 8.1:+22142544 | MS.gene62882:CDS |
CTGACGGCGAAGAGCGTTTC+CGG | 0.254872 | 8.1:-22133568 | None:intergenic |
AAGGTAGAGGATGGAGGTTT+TGG | 0.259692 | 8.1:+22139808 | MS.gene62882:CDS |
GTAACATTCATTCAAAGTTT+TGG | 0.260982 | 8.1:+22139838 | MS.gene62882:CDS |
AAGCCCTTTAATCCCTTGTT+AGG | 0.261850 | 8.1:+22138994 | MS.gene62882:CDS |
TTTGACGAAGTGTAATCTTT+AGG | 0.279881 | 8.1:-22141241 | None:intergenic |
AGCATATGAGCATGGGAAAA+AGG | 0.309220 | 8.1:+22138264 | MS.gene62882:CDS |
GGAATTTGAGAAGGCAAATA+TGG | 0.309519 | 8.1:+22141580 | MS.gene62882:CDS |
CTTTACAAATGGACTAATTA+CGG | 0.310331 | 8.1:+22133387 | MS.gene62882:CDS |
AGCTTCCACCCACGGATTCC+AGG | 0.322458 | 8.1:+22141525 | MS.gene62882:CDS |
ACAATGATGTATGATGATTA+TGG | 0.323008 | 8.1:+22138046 | MS.gene62882:CDS |
GGATCAGAAGCCACGGTTGC+CGG | 0.323208 | 8.1:+22133360 | MS.gene62882:CDS |
TTGTGATCATCATGGGAATA+TGG | 0.330778 | 8.1:+22140073 | MS.gene62882:CDS |
TCCGGCGTCTCTATCCATTC+TGG | 0.334542 | 8.1:-22133550 | None:intergenic |
AGGAGAAGGGCGTTAGTCTT+TGG | 0.335192 | 8.1:+22138116 | MS.gene62882:CDS |
CTCCTACCTGGCGAGGATTT+CGG | 0.339067 | 8.1:-22140157 | None:intergenic |
TCGATATACTGGTGGATATT+GGG | 0.340088 | 8.1:+22142545 | MS.gene62882:CDS |
CATTTCTGAAGGGATGATAT+TGG | 0.340358 | 8.1:-22138205 | None:intergenic |
TCAAGGAAAATGCAAGAAAA+TGG | 0.353504 | 8.1:+22142477 | MS.gene62882:CDS |
TCCCCTAACAAGGGATTAAA+GGG | 0.357578 | 8.1:-22138997 | None:intergenic |
CTGGTTTGTTTGATACCATT+AGG | 0.365540 | 8.1:+22135413 | MS.gene62882:CDS |
ATCGACGACGTACGCTTAAT+CGG | 0.368584 | 8.1:+22133504 | MS.gene62882:CDS |
TTTGGAGTACTCCTATCTTC+TGG | 0.377023 | 8.1:+22138237 | MS.gene62882:CDS |
GATAGATGATGACAGTTTAG+TGG | 0.378128 | 8.1:-22135232 | None:intergenic |
TGATACCATTAGGCAATTAG+AGG | 0.378401 | 8.1:+22135423 | MS.gene62882:CDS |
TTCAGGGAAACAGTCTCCTT+CGG | 0.379577 | 8.1:+22138911 | MS.gene62882:intron |
AATATAATTTGCCAAGGATA+AGG | 0.381936 | 8.1:-22140052 | None:intergenic |
ATTGGCTCATTAAAGTATAC+TGG | 0.382729 | 8.1:-22138187 | None:intergenic |
GATGGATGCCCAGATATATT+TGG | 0.388595 | 8.1:+22142591 | MS.gene62882:CDS |
TTCGAGGGCGAGGAGTTTAC+CGG | 0.392882 | 8.1:+22133305 | MS.gene62882:CDS |
TTCTCTAAGTGCCGTTGATC+AGG | 0.393417 | 8.1:-22141554 | None:intergenic |
TCAGGGAAACAGTCTCCTTC+GGG | 0.396439 | 8.1:+22138912 | MS.gene62882:intron |
TCCTTCAGTTGTTCATCTAA+AGG | 0.398048 | 8.1:+22133620 | MS.gene62882:CDS |
TTCATTTGAGAACTGATTCA+AGG | 0.398225 | 8.1:+22135158 | MS.gene62882:CDS |
ACTTGAGCCTGCAGGAATAC+TGG | 0.404656 | 8.1:-22140112 | None:intergenic |
AATGGAACGTTTCGATATAC+TGG | 0.407910 | 8.1:+22142534 | MS.gene62882:CDS |
ATTCTCCGGTGAACGGATCT+TGG | 0.409105 | 8.1:-22133463 | None:intergenic |
TTTCGCAAAGAAGGTGAAAA+TGG | 0.411519 | 8.1:+22142516 | MS.gene62882:CDS |
ATGGAACATTGTTGTGGAAA+AGG | 0.414030 | 8.1:+22141263 | MS.gene62882:CDS |
TTGCCGGAGTTCTTTACAAA+TGG | 0.416794 | 8.1:+22133376 | MS.gene62882:CDS |
AAAGATTACACTTCGTCAAA+TGG | 0.418594 | 8.1:+22141244 | MS.gene62882:CDS |
CCTCATTATACCTTTAGTCC+TGG | 0.419213 | 8.1:-22141355 | None:intergenic |
CTCTTTGAACTTGAGCCTGC+AGG | 0.419501 | 8.1:-22140120 | None:intergenic |
AGTTGATACAGATATATGAT+AGG | 0.421055 | 8.1:-22135263 | None:intergenic |
TTCTCCTTCTCAACAGGATC+CGG | 0.423276 | 8.1:-22138100 | None:intergenic |
AAATTGTACCGAGTCAGATT+TGG | 0.423649 | 8.1:-22141298 | None:intergenic |
CGCGAATCGTCTCGCCAGAA+TGG | 0.431637 | 8.1:+22133536 | MS.gene62882:CDS |
CCAATGAGATGCAGCACAAC+GGG | 0.432925 | 8.1:-22133233 | None:intergenic |
TCTAGGGTCAGAACTCCAAC+TGG | 0.434657 | 8.1:-22139882 | None:intergenic |
CTTTCTTCTAATTAGGTGAC+TGG | 0.437943 | 8.1:+22141124 | MS.gene62882:intron |
CTCATTATACCTTTAGTCCT+GGG | 0.439634 | 8.1:-22141354 | None:intergenic |
TGTTAGTCAAGGCATTGATA+TGG | 0.441535 | 8.1:+22138006 | MS.gene62882:CDS |
ACGCCCTTCTCCTTCTCAAC+AGG | 0.442450 | 8.1:-22138106 | None:intergenic |
AATTACCTCTAATTGCCTAA+TGG | 0.446236 | 8.1:-22135428 | None:intergenic |
ATCAACGGCACTTAGAGAAT+GGG | 0.452974 | 8.1:+22141558 | MS.gene62882:CDS |
CAATGATGTATGATGATTAT+GGG | 0.458008 | 8.1:+22138047 | MS.gene62882:CDS |
TTTCACCATCATCAAACTCT+AGG | 0.460599 | 8.1:-22139899 | None:intergenic |
GGAAAATGCAAGAAAATGGC+TGG | 0.461061 | 8.1:+22142481 | MS.gene62882:CDS |
AAGCAGATCCCTCGGGTTCA+AGG | 0.463930 | 8.1:-22136798 | None:intergenic |
TCCTCTACCTTCACAATGGC+AGG | 0.464356 | 8.1:-22139796 | None:intergenic |
AAGCAAGAGCTGTAGGATCA+TGG | 0.469213 | 8.1:+22142568 | MS.gene62882:CDS |
ATATGCTCTATCCAGAAGAT+AGG | 0.472527 | 8.1:-22138248 | None:intergenic |
CATTGATATGGAAAATAGTC+AGG | 0.474331 | 8.1:+22138018 | MS.gene62882:CDS |
TGTAGCGTGGATACAAGCTT+TGG | 0.474954 | 8.1:+22135189 | MS.gene62882:CDS |
AAGAAGCGAACTCCTTTGTC+AGG | 0.476918 | 8.1:-22139039 | None:intergenic |
AGCCCTTTAATCCCTTGTTA+GGG | 0.477745 | 8.1:+22138995 | MS.gene62882:CDS |
ACAATATATAACCTTATCCT+TGG | 0.478634 | 8.1:+22140041 | MS.gene62882:CDS |
GATCAACGGCACTTAGAGAA+TGG | 0.479149 | 8.1:+22141557 | MS.gene62882:CDS |
AAAGTACGCCATTGCGGAGG+AGG | 0.479447 | 8.1:-22133434 | None:intergenic |
CATTGTTGTGGAAAAGGACT+AGG | 0.483064 | 8.1:+22141269 | MS.gene62882:CDS |
ATTCTTTGTCAAGAACGATC+TGG | 0.485342 | 8.1:+22135394 | MS.gene62882:CDS |
AAATTATATTGTGATCATCA+TGG | 0.485557 | 8.1:+22140065 | MS.gene62882:CDS |
CCCGTTGTGCTGCATCTCAT+TGG | 0.486703 | 8.1:+22133233 | MS.gene62882:CDS |
GTCGTGCAAAGCAGATCCCT+CGG | 0.495137 | 8.1:-22136806 | None:intergenic |
CCTAGGTGGTTTCGCAAAGA+AGG | 0.495193 | 8.1:+22142507 | MS.gene62882:CDS |
TGCATCTCATTGGAGAGTCC+AGG | 0.495599 | 8.1:+22133243 | MS.gene62882:CDS |
GAGAACAGATTGAGATTCTC+CGG | 0.501584 | 8.1:-22133477 | None:intergenic |
GGTGAATTACTTCCGATCCC+TGG | 0.503690 | 8.1:-22133261 | None:intergenic |
GAATACCAATTAACAAAGAA+TGG | 0.504184 | 8.1:+22136832 | MS.gene62882:CDS |
CATACACGGCTGCACTTTCG+AGG | 0.505626 | 8.1:+22133289 | MS.gene62882:CDS |
CATTCTGGCGAGACGATTCG+CGG | 0.507691 | 8.1:-22133535 | None:intergenic |
GGATTTGTTGAAGATACAAT+GGG | 0.510337 | 8.1:+22141145 | MS.gene62882:CDS |
TGAGCTTACCCCAGGACTAA+AGG | 0.510721 | 8.1:+22141345 | MS.gene62882:CDS |
AACTCCTTTGTCAGGAAAGT+CGG | 0.512877 | 8.1:-22139031 | None:intergenic |
TTCGTAAGTTTCCCCTAACA+AGG | 0.521697 | 8.1:-22139007 | None:intergenic |
ATTGCGGAGGAGGAACCATC+GGG | 0.525539 | 8.1:-22133424 | None:intergenic |
GAAGGAGAAGAAGATGAAGA+AGG | 0.525636 | 8.1:-22133603 | None:intergenic |
AAGAAAATGGCTGGGAACCT+AGG | 0.525750 | 8.1:+22142490 | MS.gene62882:CDS |
TTGTACCGAGTCAGATTTGG+TGG | 0.526468 | 8.1:-22141295 | None:intergenic |
AATCCTCAAAACATTTCTGA+AGG | 0.528626 | 8.1:-22138216 | None:intergenic |
AGGTCTCAGCCTGGAATCCG+TGG | 0.532533 | 8.1:-22141534 | None:intergenic |
GAAATTCACCAAATATATCT+GGG | 0.536305 | 8.1:-22142599 | None:intergenic |
TAAGAAACGTTTGCTTGAAG+AGG | 0.539228 | 8.1:+22135294 | MS.gene62882:CDS |
CATTGCGGAGGAGGAACCAT+CGG | 0.540290 | 8.1:-22133425 | None:intergenic |
CCGTTGATCAGGTCTCAGCC+TGG | 0.541115 | 8.1:-22141543 | None:intergenic |
AATTATATTGTGATCATCAT+GGG | 0.542313 | 8.1:+22140066 | MS.gene62882:CDS |
AGCAAGAGCTGTAGGATCAT+GGG | 0.544115 | 8.1:+22142569 | MS.gene62882:CDS |
TTATTCCAAGATCCGTTCAC+CGG | 0.545707 | 8.1:+22133458 | MS.gene62882:CDS |
TTAGGGCGTGGAAAATATAG+TGG | 0.546554 | 8.1:+22136865 | MS.gene62882:CDS |
CGGCTGCACTTTCGAGGGCG+AGG | 0.549758 | 8.1:+22133295 | MS.gene62882:CDS |
ACCTTTAGATGAACAACTGA+AGG | 0.550447 | 8.1:-22133621 | None:intergenic |
CGTCAAATGGAACATTGTTG+TGG | 0.552399 | 8.1:+22141257 | MS.gene62882:CDS |
AGTCCATTTGTAAAGAACTC+CGG | 0.552798 | 8.1:-22133379 | None:intergenic |
GGACTAATTACGGCAAAGGA+TGG | 0.555562 | 8.1:+22133397 | MS.gene62882:CDS |
AAGAAACGTTTGCTTGAAGA+GGG | 0.556527 | 8.1:+22135295 | MS.gene62882:CDS |
TCTTGACCGAAATCCTCGCC+AGG | 0.557364 | 8.1:+22140151 | MS.gene62882:CDS |
GTTGATACAGATATATGATA+GGG | 0.559476 | 8.1:-22135262 | None:intergenic |
CTGGATAGAGCATATGAGCA+TGG | 0.561758 | 8.1:+22138256 | MS.gene62882:CDS |
CAGCCACATTATTTGGCAAG+TGG | 0.563225 | 8.1:+22141176 | MS.gene62882:CDS |
TACCGAGTCAGATTTGGTGG+TGG | 0.569125 | 8.1:-22141292 | None:intergenic |
TCGTGCAAAGCAGATCCCTC+GGG | 0.569487 | 8.1:-22136805 | None:intergenic |
AAAGGAGAAGCTTCCACCCA+CGG | 0.570119 | 8.1:+22141517 | MS.gene62882:intron |
GACTGCATTGTTCGCCGTGG+AGG | 0.570257 | 8.1:+22133339 | MS.gene62882:CDS |
GTTGGAAAAGAGACAAAGAA+TGG | 0.571522 | 8.1:+22141613 | MS.gene62882:CDS |
TTCACCATCATCAAACTCTA+GGG | 0.571647 | 8.1:-22139898 | None:intergenic |
CGATGGTTCCTCCTCCGCAA+TGG | 0.572855 | 8.1:+22133426 | MS.gene62882:CDS |
TATTGGGAAGCAAGAGCTGT+AGG | 0.573587 | 8.1:+22142561 | MS.gene62882:CDS |
AGAGAATGGGGAATTTGAGA+AGG | 0.574961 | 8.1:+22141571 | MS.gene62882:CDS |
AGCCACATTATTTGGCAAGT+GGG | 0.575209 | 8.1:+22141177 | MS.gene62882:CDS |
CAATGGCAGGCAACCACAGT+TGG | 0.575286 | 8.1:-22139783 | None:intergenic |
TCAATTCAACTTGACCCAGT+TGG | 0.576089 | 8.1:+22139867 | MS.gene62882:CDS |
GCCCTTTAATCCCTTGTTAG+GGG | 0.581179 | 8.1:+22138996 | MS.gene62882:CDS |
GCATCTCATTGGAGAGTCCA+GGG | 0.581823 | 8.1:+22133244 | MS.gene62882:CDS |
TGGATTTGTTGAAGATACAA+TGG | 0.582114 | 8.1:+22141144 | MS.gene62882:CDS |
ACACTGAATGAGCTTACCCC+AGG | 0.584389 | 8.1:+22141337 | MS.gene62882:CDS |
TGGATAGAGCATATGAGCAT+GGG | 0.584720 | 8.1:+22138257 | MS.gene62882:CDS |
GCCAGAATGGATAGAGACGC+CGG | 0.586219 | 8.1:+22133549 | MS.gene62882:CDS |
GCCATTGTGAAGGTAGAGGA+TGG | 0.586276 | 8.1:+22139799 | MS.gene62882:CDS |
CTGACCCTAGAGTTTGATGA+TGG | 0.588643 | 8.1:+22139894 | MS.gene62882:CDS |
GTAATCGCCAGTATTCCTGC+AGG | 0.591049 | 8.1:+22140105 | MS.gene62882:CDS |
GTCAATGATCAAAGACAATG+TGG | 0.591275 | 8.1:+22138138 | MS.gene62882:CDS |
AAATATGGAGAAACAAAGGT+TGG | 0.591541 | 8.1:+22141595 | MS.gene62882:CDS |
GGCAGGCAACCACAGTTGGA+TGG | 0.595585 | 8.1:-22139779 | None:intergenic |
AAATGGACTAATTACGGCAA+AGG | 0.595813 | 8.1:+22133393 | MS.gene62882:CDS |
AAGGTTTATGACTCTTCTGA+CGG | 0.598402 | 8.1:-22133584 | None:intergenic |
GCCTGCCATTGTGAAGGTAG+AGG | 0.598638 | 8.1:+22139795 | MS.gene62882:CDS |
CCTTCTTTGCGAAACCACCT+AGG | 0.602307 | 8.1:-22142507 | None:intergenic |
GGAACGTTTCGATATACTGG+TGG | 0.603452 | 8.1:+22142537 | MS.gene62882:CDS |
GCTTCCGGATCCTGTTGAGA+AGG | 0.604677 | 8.1:+22138096 | MS.gene62882:CDS |
TCATTGGAGAGTCCAGGGAT+CGG | 0.605015 | 8.1:+22133249 | MS.gene62882:CDS |
AGTGCAGCCGTGTATGACTC+CGG | 0.606485 | 8.1:-22133282 | None:intergenic |
GGTAAGCTCATTCAGTGTGA+TGG | 0.607115 | 8.1:-22141332 | None:intergenic |
GATTGAGATTCTCCGGTGAA+CGG | 0.609231 | 8.1:-22133470 | None:intergenic |
GGTATCCTCAAATAGTAAGA+CGG | 0.610160 | 8.1:+22138068 | MS.gene62882:CDS |
GAAAATGCAAGAAAATGGCT+GGG | 0.611031 | 8.1:+22142482 | MS.gene62882:CDS |
GATCACAATATAATTTGCCA+AGG | 0.612712 | 8.1:-22140058 | None:intergenic |
TGAAATATTTCAGTGGAGCA+AGG | 0.613705 | 8.1:+22139917 | MS.gene62882:CDS |
ATCCTCAAAACATTTCTGAA+GGG | 0.613815 | 8.1:-22138215 | None:intergenic |
GCGAGGAGTTTACCGGCGAG+TGG | 0.614782 | 8.1:+22133312 | MS.gene62882:CDS |
GGATCCTGTTGAGAAGGAGA+AGG | 0.614967 | 8.1:+22138102 | MS.gene62882:CDS |
AGGGATCGGAAGTAATTCAC+CGG | 0.615080 | 8.1:+22133263 | MS.gene62882:CDS |
AAGCTTGTATCCACGCTACA+CGG | 0.615200 | 8.1:-22135186 | None:intergenic |
GCTCATTAAAGTATACTGGA+AGG | 0.617576 | 8.1:-22138183 | None:intergenic |
TCTGGATATGCATCATCAGA+AGG | 0.618172 | 8.1:+22138961 | MS.gene62882:CDS |
TCATTATACCTTTAGTCCTG+GGG | 0.620951 | 8.1:-22141353 | None:intergenic |
GTAAAGAACTCCGGCAACCG+TGG | 0.621812 | 8.1:-22133370 | None:intergenic |
GATCCTGTTGAGAAGGAGAA+GGG | 0.622608 | 8.1:+22138103 | MS.gene62882:CDS |
GGCAGCTAACCTTGAACCCG+AGG | 0.623759 | 8.1:+22136789 | MS.gene62882:intron |
GGCCACCACCAAATCTGACT+CGG | 0.623879 | 8.1:+22141290 | MS.gene62882:CDS |
TCCAATGAGATGCAGCACAA+CGG | 0.624692 | 8.1:-22133234 | None:intergenic |
GGTCTCAGCCTGGAATCCGT+GGG | 0.626857 | 8.1:-22141533 | None:intergenic |
AGGCAAATATGGAGAAACAA+AGG | 0.630247 | 8.1:+22141591 | MS.gene62882:CDS |
CAAGGAAAGACCGTGTAGCG+TGG | 0.631619 | 8.1:+22135176 | MS.gene62882:CDS |
CCGTGGAGGATCAGAAGCCA+CGG | 0.633089 | 8.1:+22133353 | MS.gene62882:CDS |
CTCAGCCTGGAATCCGTGGG+TGG | 0.633274 | 8.1:-22141530 | None:intergenic |
TAGCAGTGAAAATCTTGTGA+AGG | 0.636958 | 8.1:+22135318 | MS.gene62882:CDS |
TCTGCGGAAGCTGTTAGTCA+AGG | 0.641099 | 8.1:+22137995 | MS.gene62882:CDS |
TCGTAAGTTTCCCCTAACAA+GGG | 0.642972 | 8.1:-22139006 | None:intergenic |
AGGAATACTGGCGATTACCA+CGG | 0.645278 | 8.1:-22140100 | None:intergenic |
ATGCAGTCAGATCCACTCGC+CGG | 0.646020 | 8.1:-22133324 | None:intergenic |
GTGGTTGCCTGCCATTGTGA+AGG | 0.649232 | 8.1:+22139789 | MS.gene62882:CDS |
TAATTCACCGGAGTCATACA+CGG | 0.650053 | 8.1:+22133275 | MS.gene62882:CDS |
ATGATGGTGAAATATTTCAG+TGG | 0.650358 | 8.1:+22139910 | MS.gene62882:CDS |
CATGGGAATATGGAAATCCG+TGG | 0.651698 | 8.1:+22140083 | MS.gene62882:CDS |
GTAGAACCTCCTACCTGGCG+AGG | 0.655780 | 8.1:-22140164 | None:intergenic |
CTAGGGTCAGAACTCCAACT+GGG | 0.658230 | 8.1:-22139881 | None:intergenic |
AATAAGAAAGTACGCCATTG+CGG | 0.660257 | 8.1:-22133440 | None:intergenic |
CCAGGCTGAGACCTGATCAA+CGG | 0.663381 | 8.1:+22141543 | MS.gene62882:CDS |
TGCATATCCAGAAACAGCAA+AGG | 0.663498 | 8.1:-22138950 | None:intergenic |
GCAAAGGATGGAGATCCCGA+TGG | 0.666798 | 8.1:+22133409 | MS.gene62882:CDS |
TCAACGGCACTTAGAGAATG+GGG | 0.669553 | 8.1:+22141559 | MS.gene62882:CDS |
CAGCAACGTTCAATGCCCGA+AGG | 0.671551 | 8.1:-22138927 | None:intergenic |
AAAATGGCTGGGAACCTAGG+TGG | 0.671755 | 8.1:+22142493 | MS.gene62882:CDS |
AAGAAAGTACGCCATTGCGG+AGG | 0.672163 | 8.1:-22133437 | None:intergenic |
ATCCCACTTGCCAAATAATG+TGG | 0.674658 | 8.1:-22141179 | None:intergenic |
ATACACGGCTGCACTTTCGA+GGG | 0.677693 | 8.1:+22133290 | MS.gene62882:CDS |
CCGTGGCTTCTGATCCTCCA+CGG | 0.679159 | 8.1:-22133353 | None:intergenic |
ATATATCTGTATCAACTGAG+AGG | 0.679661 | 8.1:+22135269 | MS.gene62882:CDS |
ATTGTGAAGGTAGAGGATGG+AGG | 0.682063 | 8.1:+22139802 | MS.gene62882:CDS |
AGAGCTGTAGGATCATGGGA+TGG | 0.683308 | 8.1:+22142573 | MS.gene62882:CDS |
TCTGACTGCATTGTTCGCCG+TGG | 0.685403 | 8.1:+22133336 | MS.gene62882:CDS |
GCAGCTAACCTTGAACCCGA+GGG | 0.688367 | 8.1:+22136790 | MS.gene62882:CDS |
TCCATCCTCTACCTTCACAA+TGG | 0.688384 | 8.1:-22139800 | None:intergenic |
GCTATCAGAATGCAGTACAA+CGG | 0.696464 | 8.1:+22137832 | MS.gene62882:intron |
TCAATGATCAAAGACAATGT+GGG | 0.707465 | 8.1:+22138139 | MS.gene62882:CDS |
GAAGCCGACTTTCCTGACAA+AGG | 0.708212 | 8.1:+22139027 | MS.gene62882:CDS |
GGTTAGTCACCATCCAACTG+TGG | 0.711984 | 8.1:+22139770 | MS.gene62882:intron |
AAATCGAGTGAACATGTCTG+CGG | 0.724062 | 8.1:+22137979 | MS.gene62882:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 22133213 | 22142656 | 22133213 | ID=MS.gene62882 |
chr8.1 | mRNA | 22133213 | 22142656 | 22133213 | ID=MS.gene62882.t1;Parent=MS.gene62882 |
chr8.1 | exon | 22133213 | 22133641 | 22133213 | ID=MS.gene62882.t1.exon1;Parent=MS.gene62882.t1 |
chr8.1 | CDS | 22133213 | 22133641 | 22133213 | ID=cds.MS.gene62882.t1;Parent=MS.gene62882.t1 |
chr8.1 | exon | 22135091 | 22135444 | 22135091 | ID=MS.gene62882.t1.exon2;Parent=MS.gene62882.t1 |
chr8.1 | CDS | 22135091 | 22135444 | 22135091 | ID=cds.MS.gene62882.t1;Parent=MS.gene62882.t1 |
chr8.1 | exon | 22136790 | 22136886 | 22136790 | ID=MS.gene62882.t1.exon3;Parent=MS.gene62882.t1 |
chr8.1 | CDS | 22136790 | 22136886 | 22136790 | ID=cds.MS.gene62882.t1;Parent=MS.gene62882.t1 |
chr8.1 | exon | 22137840 | 22138285 | 22137840 | ID=MS.gene62882.t1.exon4;Parent=MS.gene62882.t1 |
chr8.1 | CDS | 22137840 | 22138285 | 22137840 | ID=cds.MS.gene62882.t1;Parent=MS.gene62882.t1 |
chr8.1 | exon | 22138916 | 22139071 | 22138916 | ID=MS.gene62882.t1.exon5;Parent=MS.gene62882.t1 |
chr8.1 | CDS | 22138916 | 22139071 | 22138916 | ID=cds.MS.gene62882.t1;Parent=MS.gene62882.t1 |
chr8.1 | exon | 22139771 | 22139938 | 22139771 | ID=MS.gene62882.t1.exon6;Parent=MS.gene62882.t1 |
chr8.1 | CDS | 22139771 | 22139938 | 22139771 | ID=cds.MS.gene62882.t1;Parent=MS.gene62882.t1 |
chr8.1 | exon | 22140032 | 22140172 | 22140032 | ID=MS.gene62882.t1.exon7;Parent=MS.gene62882.t1 |
chr8.1 | CDS | 22140032 | 22140172 | 22140032 | ID=cds.MS.gene62882.t1;Parent=MS.gene62882.t1 |
chr8.1 | exon | 22141139 | 22141366 | 22141139 | ID=MS.gene62882.t1.exon8;Parent=MS.gene62882.t1 |
chr8.1 | CDS | 22141139 | 22141366 | 22141139 | ID=cds.MS.gene62882.t1;Parent=MS.gene62882.t1 |
chr8.1 | exon | 22141521 | 22141634 | 22141521 | ID=MS.gene62882.t1.exon9;Parent=MS.gene62882.t1 |
chr8.1 | CDS | 22141521 | 22141634 | 22141521 | ID=cds.MS.gene62882.t1;Parent=MS.gene62882.t1 |
chr8.1 | exon | 22142477 | 22142656 | 22142477 | ID=MS.gene62882.t1.exon10;Parent=MS.gene62882.t1 |
chr8.1 | CDS | 22142477 | 22142656 | 22142477 | ID=cds.MS.gene62882.t1;Parent=MS.gene62882.t1 |
Gene Sequence |
Protein sequence |