Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64910.t1 | XP_003612408.2 | 96 | 573 | 16 | 3 | 1 | 572 | 1 | 567 | 0.00E+00 | 1075.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64910.t1 | O22757 | 57.6 | 576 | 227 | 7 | 4 | 565 | 10 | 582 | 3.0e-179 | 629.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64910.t1 | G7K2K3 | 96.0 | 573 | 16 | 3 | 1 | 572 | 1 | 567 | 0.0e+00 | 1075.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049993 | MS.gene64910 | 0.846475 | 2.12E-59 | -1.69E-46 |
| MS.gene050787 | MS.gene64910 | 0.803445 | 3.47E-49 | -1.69E-46 |
| MS.gene051208 | MS.gene64910 | 0.801376 | 9.27E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene64910 | 0.821103 | 4.82E-53 | -1.69E-46 |
| MS.gene051568 | MS.gene64910 | 0.801964 | 7.02E-49 | -1.69E-46 |
| MS.gene051588 | MS.gene64910 | 0.815175 | 1.06E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene64910 | -0.877207 | 7.56E-69 | -1.69E-46 |
| MS.gene052135 | MS.gene64910 | 0.802616 | 5.15E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene64910 | 0.80581 | 1.12E-49 | -1.69E-46 |
| MS.gene053176 | MS.gene64910 | 0.830836 | 2.35E-55 | -1.69E-46 |
| MS.gene053330 | MS.gene64910 | 0.806038 | 9.99E-50 | -1.69E-46 |
| MS.gene054102 | MS.gene64910 | 0.808812 | 2.58E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene64910 | 0.892256 | 1.88E-74 | -1.69E-46 |
| MS.gene054548 | MS.gene64910 | 0.829114 | 6.17E-55 | -1.69E-46 |
| MS.gene054719 | MS.gene64910 | 0.831397 | 1.71E-55 | -1.69E-46 |
| MS.gene054918 | MS.gene64910 | 0.804907 | 1.72E-49 | -1.69E-46 |
| MS.gene054920 | MS.gene64910 | 0.837591 | 4.75E-57 | -1.69E-46 |
| MS.gene055217 | MS.gene64910 | 0.832418 | 9.56E-56 | -1.69E-46 |
| MS.gene055356 | MS.gene64910 | 0.824254 | 8.92E-54 | -1.69E-46 |
| MS.gene055358 | MS.gene64910 | 0.848033 | 7.93E-60 | -1.69E-46 |
| MS.gene055367 | MS.gene64910 | 0.802869 | 4.57E-49 | -1.69E-46 |
| MS.gene055369 | MS.gene64910 | 0.819299 | 1.25E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene64910 | 0.802225 | 6.20E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene64910 | 0.82754 | 1.48E-54 | -1.69E-46 |
| MS.gene056723 | MS.gene64910 | 0.821763 | 3.40E-53 | -1.69E-46 |
| MS.gene057476 | MS.gene64910 | 0.828171 | 1.04E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene64910 | 0.805802 | 1.12E-49 | -1.69E-46 |
| MS.gene058885 | MS.gene64910 | 0.807759 | 4.32E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene64910 | 0.870558 | 1.33E-66 | -1.69E-46 |
| MS.gene059609 | MS.gene64910 | 0.819972 | 8.77E-53 | -1.69E-46 |
| MS.gene059868 | MS.gene64910 | 0.801435 | 9.02E-49 | -1.69E-46 |
| MS.gene059958 | MS.gene64910 | 0.83869 | 2.48E-57 | -1.69E-46 |
| MS.gene060038 | MS.gene64910 | 0.805864 | 1.09E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene64910 | -0.87354 | 1.36E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64910.t1 | MTR_5g024700 | 95.986 | 573 | 16 | 3 | 1 | 572 | 1 | 567 | 0.0 | 1127 |
| MS.gene64910.t1 | MTR_8g073130 | 69.052 | 559 | 155 | 10 | 3 | 551 | 8 | 558 | 0.0 | 748 |
| MS.gene64910.t1 | MTR_8g073130 | 69.779 | 407 | 115 | 5 | 3 | 405 | 8 | 410 | 0.0 | 582 |
| MS.gene64910.t1 | MTR_8g073130 | 70.153 | 392 | 109 | 5 | 3 | 390 | 8 | 395 | 0.0 | 562 |
| MS.gene64910.t1 | MTR_3g115960 | 56.970 | 495 | 186 | 4 | 28 | 498 | 9 | 500 | 0.0 | 548 |
| MS.gene64910.t1 | MTR_3g115940 | 47.112 | 554 | 263 | 10 | 30 | 565 | 9 | 550 | 1.23e-167 | 488 |
| MS.gene64910.t1 | MTR_6g033330 | 47.421 | 504 | 254 | 6 | 30 | 524 | 9 | 510 | 5.08e-161 | 472 |
| MS.gene64910.t1 | MTR_3g115940 | 46.562 | 509 | 242 | 10 | 75 | 565 | 3 | 499 | 1.52e-155 | 455 |
| MS.gene64910.t1 | MTR_2g093750 | 45.614 | 513 | 256 | 6 | 30 | 524 | 8 | 515 | 4.44e-149 | 442 |
| MS.gene64910.t1 | MTR_3g115940 | 43.321 | 554 | 241 | 11 | 30 | 565 | 9 | 507 | 1.30e-141 | 420 |
| MS.gene64910.t1 | MTR_6g033330 | 46.829 | 410 | 211 | 3 | 23 | 425 | 2 | 411 | 2.32e-134 | 397 |
| MS.gene64910.t1 | MTR_3g115940 | 51.302 | 384 | 171 | 5 | 30 | 404 | 9 | 385 | 4.05e-131 | 388 |
| MS.gene64910.t1 | MTR_3g118190 | 43.297 | 455 | 231 | 6 | 30 | 466 | 12 | 457 | 1.14e-126 | 382 |
| MS.gene64910.t1 | MTR_8g010530 | 41.829 | 514 | 270 | 7 | 30 | 522 | 12 | 517 | 1.21e-126 | 382 |
| MS.gene64910.t1 | MTR_4g079140 | 38.748 | 511 | 275 | 6 | 30 | 537 | 7 | 482 | 1.29e-119 | 365 |
| MS.gene64910.t1 | MTR_8g010500 | 42.827 | 467 | 245 | 8 | 48 | 494 | 28 | 492 | 2.71e-116 | 355 |
| MS.gene64910.t1 | MTR_2g028470 | 40.041 | 482 | 264 | 8 | 29 | 498 | 7 | 475 | 1.06e-108 | 334 |
| MS.gene64910.t1 | MTR_2g079500 | 37.705 | 488 | 267 | 10 | 23 | 492 | 2 | 470 | 7.91e-105 | 326 |
| MS.gene64910.t1 | MTR_5g022400 | 34.436 | 514 | 313 | 9 | 24 | 527 | 4 | 503 | 3.69e-82 | 267 |
| MS.gene64910.t1 | MTR_2g006280 | 36.703 | 455 | 265 | 11 | 30 | 473 | 9 | 451 | 2.02e-81 | 265 |
| MS.gene64910.t1 | MTR_5g022400 | 35.052 | 388 | 237 | 8 | 24 | 401 | 4 | 386 | 2.05e-59 | 202 |
| MS.gene64910.t1 | MTR_2g030020 | 38.835 | 103 | 53 | 3 | 368 | 470 | 8 | 100 | 1.98e-17 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64910.t1 | AT2G17480 | 59.066 | 557 | 213 | 7 | 21 | 565 | 29 | 582 | 0.0 | 647 |
| MS.gene64910.t1 | AT2G17430 | 57.353 | 544 | 218 | 4 | 3 | 545 | 8 | 538 | 0.0 | 625 |
| MS.gene64910.t1 | AT5G65970 | 57.829 | 562 | 209 | 8 | 15 | 567 | 21 | 563 | 0.0 | 616 |
| MS.gene64910.t1 | AT2G33670 | 56.112 | 499 | 201 | 6 | 30 | 527 | 15 | 496 | 0.0 | 558 |
| MS.gene64910.t1 | AT1G42560 | 58.444 | 450 | 181 | 4 | 30 | 476 | 14 | 460 | 0.0 | 519 |
| MS.gene64910.t1 | AT1G61560 | 46.618 | 547 | 268 | 7 | 30 | 564 | 8 | 542 | 1.18e-168 | 491 |
| MS.gene64910.t1 | AT1G61560 | 45.537 | 549 | 271 | 9 | 30 | 564 | 8 | 542 | 2.65e-161 | 473 |
| MS.gene64910.t1 | AT5G65970 | 60.989 | 364 | 126 | 4 | 15 | 378 | 21 | 368 | 8.89e-161 | 468 |
| MS.gene64910.t1 | AT1G11310 | 49.891 | 459 | 215 | 3 | 30 | 473 | 8 | 466 | 2.31e-156 | 460 |
| MS.gene64910.t1 | AT1G61560 | 51.740 | 431 | 196 | 3 | 30 | 448 | 8 | 438 | 4.87e-153 | 447 |
| MS.gene64910.t1 | AT2G39200 | 45.562 | 507 | 266 | 5 | 30 | 527 | 6 | 511 | 5.24e-153 | 451 |
| MS.gene64910.t1 | AT1G61560 | 44.919 | 492 | 247 | 7 | 85 | 564 | 1 | 480 | 2.79e-142 | 422 |
| MS.gene64910.t1 | AT1G61560 | 44.919 | 492 | 247 | 7 | 85 | 564 | 1 | 480 | 2.79e-142 | 422 |
| MS.gene64910.t1 | AT1G61560 | 50.856 | 409 | 189 | 3 | 29 | 425 | 7 | 415 | 2.82e-141 | 416 |
| MS.gene64910.t1 | AT1G61560 | 50.856 | 409 | 189 | 3 | 29 | 425 | 7 | 415 | 2.82e-141 | 416 |
| MS.gene64910.t1 | AT1G42560 | 57.027 | 370 | 153 | 4 | 30 | 396 | 14 | 380 | 1.50e-138 | 407 |
| MS.gene64910.t1 | AT3G45290 | 43.107 | 457 | 247 | 3 | 30 | 486 | 17 | 460 | 1.52e-135 | 404 |
| MS.gene64910.t1 | AT1G61560 | 51.562 | 384 | 174 | 3 | 30 | 401 | 8 | 391 | 4.25e-134 | 397 |
| MS.gene64910.t1 | AT1G61560 | 51.562 | 384 | 174 | 3 | 30 | 401 | 8 | 391 | 4.25e-134 | 397 |
| MS.gene64910.t1 | AT1G61560 | 51.562 | 384 | 174 | 3 | 30 | 401 | 8 | 391 | 4.25e-134 | 397 |
| MS.gene64910.t1 | AT1G11310 | 49.148 | 411 | 194 | 5 | 30 | 425 | 8 | 418 | 4.38e-133 | 394 |
| MS.gene64910.t1 | AT2G44110 | 41.633 | 502 | 278 | 7 | 31 | 529 | 7 | 496 | 5.38e-130 | 389 |
| MS.gene64910.t1 | AT1G11310 | 48.020 | 404 | 195 | 3 | 85 | 473 | 1 | 404 | 1.41e-129 | 389 |
| MS.gene64910.t1 | AT2G44110 | 41.468 | 504 | 277 | 9 | 31 | 529 | 7 | 497 | 4.71e-128 | 384 |
| MS.gene64910.t1 | AT4G02600 | 41.701 | 482 | 263 | 6 | 31 | 500 | 9 | 484 | 2.25e-126 | 381 |
| MS.gene64910.t1 | AT4G02600 | 41.701 | 482 | 263 | 6 | 31 | 500 | 9 | 484 | 2.25e-126 | 381 |
| MS.gene64910.t1 | AT4G24250 | 40.166 | 483 | 268 | 7 | 29 | 500 | 6 | 478 | 9.00e-110 | 337 |
| MS.gene64910.t1 | AT5G53760 | 38.703 | 478 | 284 | 7 | 22 | 492 | 8 | 483 | 1.11e-106 | 332 |
| MS.gene64910.t1 | AT5G53760 | 38.703 | 478 | 284 | 7 | 22 | 492 | 8 | 483 | 1.11e-106 | 332 |
| MS.gene64910.t1 | AT1G26700 | 39.050 | 484 | 267 | 11 | 24 | 486 | 4 | 480 | 3.05e-103 | 322 |
| MS.gene64910.t1 | AT1G26700 | 39.050 | 484 | 267 | 11 | 24 | 486 | 4 | 480 | 3.05e-103 | 322 |
| MS.gene64910.t1 | AT4G24250 | 41.730 | 393 | 208 | 7 | 29 | 410 | 6 | 388 | 2.41e-91 | 286 |
| MS.gene64910.t1 | AT1G11000 | 33.902 | 469 | 290 | 8 | 30 | 490 | 9 | 465 | 3.35e-80 | 263 |
| MS.gene64910.t1 | AT1G11000 | 33.902 | 469 | 290 | 8 | 30 | 490 | 9 | 465 | 3.35e-80 | 263 |
| MS.gene64910.t1 | AT1G11000 | 33.416 | 404 | 255 | 6 | 30 | 427 | 9 | 404 | 4.00e-66 | 221 |
Find 105 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACAAGATATATGTTATT+TGG | 0.146379 | 5.3:-14316692 | None:intergenic |
| AACAAAATGCTTACAATAAT+TGG | 0.147044 | 5.3:-14316335 | None:intergenic |
| TAATTTGTTGCAGATAATTT+TGG | 0.171828 | 5.3:+14316406 | MS.gene64910:intron |
| GAAAGTGAACTCATCATTAT+TGG | 0.216889 | 5.3:-14317622 | None:intergenic |
| GCCATTATAAAAGTAGCTTT+TGG | 0.241594 | 5.3:+14316908 | MS.gene64910:CDS |
| CAGGATGGCGTACTCCAATA+TGG | 0.262453 | 5.3:+14316300 | MS.gene64910:intron |
| TCTTGTTTGTGTCTCTTCTA+TGG | 0.266325 | 5.3:+14311310 | MS.gene64910:CDS |
| ATTTCACTGTTATTAACTAT+TGG | 0.268067 | 5.3:+14313913 | MS.gene64910:CDS |
| TGGAAATTAAATTTACTTCC+AGG | 0.296007 | 5.3:-14315663 | None:intergenic |
| AGTGCTGTCACAATGCTTCT+TGG | 0.313331 | 5.3:+14314587 | MS.gene64910:CDS |
| GTTTCTCACCATGAATGTTT+AGG | 0.319021 | 5.3:-14315877 | None:intergenic |
| TTCTTGCTCCTAAACATTCA+TGG | 0.336700 | 5.3:+14315869 | MS.gene64910:CDS |
| GACTGGACGCACAATATAAA+AGG | 0.347738 | 5.3:-14315001 | None:intergenic |
| ATACCTGAAACAAAGCAAAA+TGG | 0.358535 | 5.3:-14316574 | None:intergenic |
| GTGCCATTTCTTTAATGCCT+TGG | 0.360439 | 5.3:-14317334 | None:intergenic |
| TACCTTCCTGCTGCATTTGA+AGG | 0.366783 | 5.3:-14314100 | None:intergenic |
| AACACGATCTTCAACCTTTG+AGG | 0.381549 | 5.3:+14317488 | MS.gene64910:CDS |
| GCTGGAAAATTGTTTCCGTT+TGG | 0.393446 | 5.3:+14316874 | MS.gene64910:CDS |
| AAGGCTCAGATAGATACTTT+TGG | 0.393792 | 5.3:+14316519 | MS.gene64910:CDS |
| CCATGTCCACATAAATATAT+AGG | 0.399986 | 5.3:+14313991 | MS.gene64910:CDS |
| ATTTACTTCCAGGAGCTAGA+TGG | 0.409021 | 5.3:-14315653 | None:intergenic |
| ATTATCTGATAATGAGTTGA+TGG | 0.411205 | 5.3:+14317527 | MS.gene64910:CDS |
| TAAATCCATTGCGCAAAGTC+TGG | 0.417004 | 5.3:-14315463 | None:intergenic |
| ATCATTAGAAGATGACTTCA+AGG | 0.418712 | 5.3:+14315701 | MS.gene64910:CDS |
| CATCCAAGGCATTAAAGAAA+TGG | 0.418981 | 5.3:+14317331 | MS.gene64910:CDS |
| AAGCTAGGAAAGACTACTAT+AGG | 0.420367 | 5.3:+14317381 | MS.gene64910:CDS |
| TCAAGTGATATTAGCAAGAA+TGG | 0.432108 | 5.3:+14316445 | MS.gene64910:CDS |
| GCTTACAATAATTGGAATCA+AGG | 0.442500 | 5.3:-14316327 | None:intergenic |
| ATGAGCAAGAAGCAGAAGAT+AGG | 0.443418 | 5.3:+14317580 | MS.gene64910:CDS |
| GTGCAGATGCTGCAAAATTC+AGG | 0.444314 | 5.3:+14314917 | MS.gene64910:intron |
| GGAATCAAGGATGCCCATAT+TGG | 0.444495 | 5.3:-14316314 | None:intergenic |
| AAACGGTGAAGTGCTGGTCC+AGG | 0.458690 | 5.3:-14317447 | None:intergenic |
| AGAATATGAGGATGTGTAAC+TGG | 0.460799 | 5.3:-14314538 | None:intergenic |
| CAAGGAATGCCTCTTGTTCA+AGG | 0.463724 | 5.3:+14316500 | MS.gene64910:CDS |
| GTTAGGAAATAGAGAAAAGA+AGG | 0.465297 | 5.3:+14313703 | MS.gene64910:CDS |
| TCAAGGTAGTCGTGGGAGTA+AGG | 0.468406 | 5.3:+14315718 | MS.gene64910:CDS |
| CAATCATGTAGATGGGTTCA+AGG | 0.474565 | 5.3:+14317280 | MS.gene64910:intron |
| GTATAGGTCCATCTAGCTCC+TGG | 0.477053 | 5.3:+14315645 | MS.gene64910:intron |
| ATAGTAAAGTGGAACAAAGT+AGG | 0.485840 | 5.3:+14314031 | MS.gene64910:CDS |
| CTTCACCGTTTCAAAACTAC+TGG | 0.490165 | 5.3:+14317459 | MS.gene64910:CDS |
| ATTTGTGAAAACTCTTCTCA+AGG | 0.491258 | 5.3:-14311450 | None:intergenic |
| CTGCAACTGCAAGTGATAGT+AGG | 0.493776 | 5.3:+14311347 | MS.gene64910:CDS |
| TGTGTTACAAGAGCATATAA+TGG | 0.494787 | 5.3:-14317074 | None:intergenic |
| AAAACTCTTCTCAAGGGCTA+TGG | 0.499026 | 5.3:-14311443 | None:intergenic |
| CTCCCTCCTTCAAATGCAGC+AGG | 0.503605 | 5.3:+14314094 | MS.gene64910:CDS |
| ATCACTTGCAGTTGCAGCCA+TGG | 0.505471 | 5.3:-14311341 | None:intergenic |
| CTATCTGAGCCTTGAACAAG+AGG | 0.511794 | 5.3:-14316509 | None:intergenic |
| TCCAAATAACATATATCTTG+TGG | 0.513239 | 5.3:+14316691 | MS.gene64910:CDS |
| ATATTCATCTTGTTCCTCAA+AGG | 0.514030 | 5.3:-14317502 | None:intergenic |
| TGGCAAGCTTATAGTCCAAA+CGG | 0.516392 | 5.3:-14316889 | None:intergenic |
| TCACCACCTATATATTTATG+TGG | 0.522982 | 5.3:-14313997 | None:intergenic |
| CTTCTATGGAGGTTTATCCA+TGG | 0.524831 | 5.3:+14311324 | MS.gene64910:CDS |
| TTTAAACAGTCCTGTCCTCT+GGG | 0.526222 | 5.3:+14315832 | MS.gene64910:intron |
| TATGAAATCAAATAGTAAAG+TGG | 0.527640 | 5.3:+14314020 | MS.gene64910:CDS |
| GTGGATGGTAGCACCATTGT+TGG | 0.532984 | 5.3:+14317408 | MS.gene64910:CDS |
| AGGATGGCGTACTCCAATAT+GGG | 0.537615 | 5.3:+14316301 | MS.gene64910:intron |
| GGATCAACAATGCAGTCCCC+TGG | 0.538298 | 5.3:+14317429 | MS.gene64910:CDS |
| AGATACGTGGATGGAAGGAA+TGG | 0.539200 | 5.3:+14314718 | MS.gene64910:intron |
| CACTTGATCAAACACCGACA+TGG | 0.539851 | 5.3:+14311383 | MS.gene64910:CDS |
| CCTATATATTTATGTGGACA+TGG | 0.544668 | 5.3:-14313991 | None:intergenic |
| TCTGCTTGAAGCTCTAGAAA+AGG | 0.545191 | 5.3:+14313727 | MS.gene64910:CDS |
| CTTCCTGCTGCATTTGAAGG+AGG | 0.545611 | 5.3:-14314097 | None:intergenic |
| AACAATGGTGCTACCATCCA+CGG | 0.546293 | 5.3:-14317406 | None:intergenic |
| AGAAAACTCCCTCTTGAACA+TGG | 0.547069 | 5.3:-14311290 | None:intergenic |
| TTCCTGCTGCATTTGAAGGA+GGG | 0.549958 | 5.3:-14314096 | None:intergenic |
| ACAGCTGATGCCCAGAGGAC+AGG | 0.549959 | 5.3:-14315842 | None:intergenic |
| ACTTGATCAAACACCGACAT+GGG | 0.550596 | 5.3:+14311384 | MS.gene64910:CDS |
| AGACTGCTAGGAAGAATATG+AGG | 0.552334 | 5.3:-14314550 | None:intergenic |
| TAACATATATCTTGTGGACA+TGG | 0.554175 | 5.3:+14316697 | MS.gene64910:CDS |
| TTTGTGAAAACTCTTCTCAA+GGG | 0.555200 | 5.3:-14311449 | None:intergenic |
| GCTCTAGAAAAGGTCAAGGC+TGG | 0.557508 | 5.3:+14313737 | MS.gene64910:CDS |
| AACGGTGAAGTGCTGGTCCA+GGG | 0.561182 | 5.3:-14317446 | None:intergenic |
| TGTTTGTGTCTCTTCTATGG+AGG | 0.561209 | 5.3:+14311313 | MS.gene64910:CDS |
| ATTATATGCTCTTGTAACAC+AGG | 0.568116 | 5.3:+14317076 | MS.gene64910:CDS |
| GATACGTGGATGGAAGGAAT+GGG | 0.573280 | 5.3:+14314719 | MS.gene64910:intron |
| ATAAGATGAAGAACTAATTG+AGG | 0.574661 | 5.3:-14316551 | None:intergenic |
| TCTGCAGATACGTGGATGGA+AGG | 0.581567 | 5.3:+14314713 | MS.gene64910:intron |
| AAAACACATGAAAGACTGCT+AGG | 0.587475 | 5.3:-14314562 | None:intergenic |
| CATGGTTATGAGTTCGCCAA+TGG | 0.587616 | 5.3:+14314759 | MS.gene64910:CDS |
| AGATGACTTCAAGGTAGTCG+TGG | 0.587794 | 5.3:+14315710 | MS.gene64910:CDS |
| GAAGATAGGCATCACAGTGA+GGG | 0.593750 | 5.3:+14317594 | MS.gene64910:CDS |
| AGTCCATTCACAGATAAAAG+TGG | 0.595794 | 5.3:-14314512 | None:intergenic |
| TATCTACCTTCAAAAGACAC+TGG | 0.597529 | 5.3:-14314057 | None:intergenic |
| AACATATATCTTGTGGACAT+GGG | 0.598646 | 5.3:+14316698 | MS.gene64910:CDS |
| ATTTGATGAACAAACATCCA+AGG | 0.600958 | 5.3:+14317317 | MS.gene64910:CDS |
| GATTACCAGACTTTGCGCAA+TGG | 0.602153 | 5.3:+14315458 | MS.gene64910:CDS |
| GAAGAGTAATGTAGCTGCAG+AGG | 0.603909 | 5.3:-14317052 | None:intergenic |
| ACGTGGATGGAAGGAATGGG+AGG | 0.615112 | 5.3:+14314722 | MS.gene64910:CDS |
| AATGCTTCTTGGAAGACTCA+AGG | 0.618511 | 5.3:+14314598 | MS.gene64910:CDS |
| TGTTTCTGCAGATACGTGGA+TGG | 0.619092 | 5.3:+14314709 | MS.gene64910:intron |
| GATGACTTCAAGGTAGTCGT+GGG | 0.621529 | 5.3:+14315711 | MS.gene64910:CDS |
| GAGGAAGAGACTTTAACTCA+TGG | 0.624104 | 5.3:+14314741 | MS.gene64910:CDS |
| CTCCTTCAAATGCAGCAGGA+AGG | 0.624540 | 5.3:+14314098 | MS.gene64910:CDS |
| ACGGTGAAGTGCTGGTCCAG+GGG | 0.626903 | 5.3:-14317445 | None:intergenic |
| GAGAGACATATAGTTGTACA+AGG | 0.627620 | 5.3:+14316482 | MS.gene64910:CDS |
| AGAAGATAGGCATCACAGTG+AGG | 0.635719 | 5.3:+14317593 | MS.gene64910:CDS |
| TGTCCACATAAATATATAGG+TGG | 0.645928 | 5.3:+14313994 | MS.gene64910:CDS |
| AGGTTGAAGATCGTGTTGAG+TGG | 0.648335 | 5.3:-14317482 | None:intergenic |
| ACTACTATAGGAACCGTGGA+TGG | 0.650018 | 5.3:+14317393 | MS.gene64910:CDS |
| TGAAGCTCTAGAAAAGGTCA+AGG | 0.656136 | 5.3:+14313733 | MS.gene64910:CDS |
| CTTGATCAAACACCGACATG+GGG | 0.671274 | 5.3:+14311385 | MS.gene64910:CDS |
| AAAGACTACTATAGGAACCG+TGG | 0.678769 | 5.3:+14317389 | MS.gene64910:CDS |
| CTGCATTGTTGATCCAACAA+TGG | 0.691467 | 5.3:-14317421 | None:intergenic |
| ACAGCAGCAACACCCCATGT+CGG | 0.719045 | 5.3:-14311397 | None:intergenic |
| AAACTACAGCTGATGCCCAG+AGG | 0.737888 | 5.3:-14315847 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATATTAATAATAA+GGG | - | chr5.3:14313590-14313609 | None:intergenic | 0.0% |
| !! | TAATAATAATATTAATAATA+AGG | - | chr5.3:14313591-14313610 | None:intergenic | 0.0% |
| !! | TATTATTATTATTATTATTA+GGG | + | chr5.3:14313010-14313029 | MS.gene64910:intron | 0.0% |
| !! | TTATTATTATTATTATTATT+AGG | + | chr5.3:14313009-14313028 | MS.gene64910:intron | 0.0% |
| !! | AAATTATAGAATAGAATTTA+TGG | + | chr5.3:14316172-14316191 | MS.gene64910:intron | 10.0% |
| !! | CAAAAAAAAAAAAAAGATTA+AGG | - | chr5.3:14316748-14316767 | None:intergenic | 10.0% |
| !! | TTAAAGTGAAAAATATTTAA+GGG | + | chr5.3:14312415-14312434 | MS.gene64910:intron | 10.0% |
| !!! | ATTTTTTTAAACAAACATTA+TGG | - | chr5.3:14315298-14315317 | None:intergenic | 10.0% |
| !!! | GAACTATAATTTTTATTATA+TGG | - | chr5.3:14316258-14316277 | None:intergenic | 10.0% |
| !!! | TAATCTTTTTTTTTTTTTTG+AGG | + | chr5.3:14316748-14316767 | MS.gene64910:intron | 10.0% |
| !!! | TATTTTAGTACTAAATTTTT+TGG | + | chr5.3:14315968-14315987 | MS.gene64910:intron | 10.0% |
| !!! | TTTAAAGTGAAAAATATTTA+AGG | + | chr5.3:14312414-14312433 | MS.gene64910:intron | 10.0% |
| !!! | TTTCACTTTAAATATATTTT+TGG | - | chr5.3:14312406-14312425 | None:intergenic | 10.0% |
| !!! | TTTTTTACTTTTTCATATTT+TGG | + | chr5.3:14312183-14312202 | MS.gene64910:intron | 10.0% |
| !!! | TTTTTTTAAACAAACATTAT+GGG | - | chr5.3:14315297-14315316 | None:intergenic | 10.0% |
| !! | AATTTGCAAAAAATTAAAAG+AGG | - | chr5.3:14315047-14315066 | None:intergenic | 15.0% |
| !! | ACTTTATTATTCAAATATAG+TGG | - | chr5.3:14315791-14315810 | None:intergenic | 15.0% |
| !! | ATTGAAATACAAGAATATTA+TGG | - | chr5.3:14315391-14315410 | None:intergenic | 15.0% |
| !! | CTTTATTATTCAAATATAGT+GGG | - | chr5.3:14315790-14315809 | None:intergenic | 15.0% |
| !! | TAATATGATGTCTAAAAAAT+TGG | + | chr5.3:14312440-14312459 | MS.gene64910:intron | 15.0% |
| !! | TACAAAAACAATAATATGTA+GGG | - | chr5.3:14312960-14312979 | None:intergenic | 15.0% |
| !! | TATAACTTAATAAGTTTCAT+AGG | - | chr5.3:14316637-14316656 | None:intergenic | 15.0% |
| !! | TTAAGGTATACTAATAATTA+AGG | - | chr5.3:14316731-14316750 | None:intergenic | 15.0% |
| !! | TTACAAAAACAATAATATGT+AGG | - | chr5.3:14312961-14312980 | None:intergenic | 15.0% |
| !! | TTTAAAAAAATACAGAAAGA+TGG | + | chr5.3:14315307-14315326 | MS.gene64910:intron | 15.0% |
| !!! | AAAAGTCAAGAAATTTTTTA+GGG | - | chr5.3:14313152-14313171 | None:intergenic | 15.0% |
| !!! | AATTTTTTAGACATCATATT+AGG | - | chr5.3:14312441-14312460 | None:intergenic | 15.0% |
| !!! | ATAAGGGTTAAATATTTTTT+TGG | - | chr5.3:14313574-14313593 | None:intergenic | 15.0% |
| !!! | ATATTTAACTTGAAAACTTT+TGG | - | chr5.3:14313180-14313199 | None:intergenic | 15.0% |
| !!! | TAAAAGTCAAGAAATTTTTT+AGG | - | chr5.3:14313153-14313172 | None:intergenic | 15.0% |
| !!! | TATTTAACTTGAAAACTTTT+GGG | - | chr5.3:14313179-14313198 | None:intergenic | 15.0% |
| !!! | TTTAATTTTTTGCAAATTTG+AGG | + | chr5.3:14315049-14315068 | MS.gene64910:intron | 15.0% |
| !!! | TTTGTATGAAATTTTCATAT+TGG | + | chr5.3:14316359-14316378 | MS.gene64910:intron | 15.0% |
| !!! | TTTTGTTAAACATACTATAT+GGG | - | chr5.3:14315515-14315534 | None:intergenic | 15.0% |
| !!! | TTTTTGTTAAACATACTATA+TGG | - | chr5.3:14315516-14315535 | None:intergenic | 15.0% |
| !! | AACAAAATGCTTACAATAAT+TGG | - | chr5.3:14316338-14316357 | None:intergenic | 20.0% |
| !! | ACCTATACATAATTTAAAGA+AGG | - | chr5.3:14315633-14315652 | None:intergenic | 20.0% |
| !! | AGAAACAAAACTTTCATATA+AGG | - | chr5.3:14314696-14314715 | None:intergenic | 20.0% |
| !! | ATACATAATTTAAAGAAGGA+AGG | - | chr5.3:14315629-14315648 | None:intergenic | 20.0% |
| !! | ATTCTTGTATTTCAATTTCA+GGG | + | chr5.3:14315395-14315414 | MS.gene64910:intron | 20.0% |
| !! | ATTTATATGATGTTAAGTGT+TGG | - | chr5.3:14312236-14312255 | None:intergenic | 20.0% |
| !! | ATTTCACTGTTATTAACTAT+TGG | + | chr5.3:14313913-14313932 | MS.gene64910:CDS | 20.0% |
| !! | GAAAAATGTCAAATATGTAT+TGG | - | chr5.3:14312552-14312571 | None:intergenic | 20.0% |
| !! | TATAATACACATCAAATAAG+TGG | + | chr5.3:14312716-14312735 | MS.gene64910:intron | 20.0% |
| !! | TATAGAATAGAATTTATGGA+GGG | + | chr5.3:14316176-14316195 | MS.gene64910:intron | 20.0% |
| !! | TATGAAATCAAATAGTAAAG+TGG | + | chr5.3:14314020-14314039 | MS.gene64910:CDS | 20.0% |
| !! | TATTCTTGTATTTCAATTTC+AGG | + | chr5.3:14315394-14315413 | MS.gene64910:intron | 20.0% |
| !! | TCCTTCTTTAAATTATGTAT+AGG | + | chr5.3:14315629-14315648 | MS.gene64910:intron | 20.0% |
| !! | TTATAGAATAGAATTTATGG+AGG | + | chr5.3:14316175-14316194 | MS.gene64910:intron | 20.0% |
| !! | TTGAAACAAACCTAAAATAT+GGG | - | chr5.3:14312498-14312517 | None:intergenic | 20.0% |
| !! | TTTGTTAAACATACTATATG+GGG | - | chr5.3:14315514-14315533 | None:intergenic | 20.0% |
| !!! | AAAGTCAAGAAATTTTTTAG+GGG | - | chr5.3:14313151-14313170 | None:intergenic | 20.0% |
| !!! | AAGTTGAATTTTTCTTTTAG+TGG | + | chr5.3:14313681-14313700 | MS.gene64910:intron | 20.0% |
| !!! | AATTTTGCTTTACTATTTCA+AGG | - | chr5.3:14312138-14312157 | None:intergenic | 20.0% |
| !!! | ACATTTAGATAAGAGTATTT+TGG | + | chr5.3:14312689-14312708 | MS.gene64910:intron | 20.0% |
| !!! | ATGATCTTTTGATATACTTT+TGG | - | chr5.3:14315686-14315705 | None:intergenic | 20.0% |
| !!! | ATTTAACTTGAAAACTTTTG+GGG | - | chr5.3:14313178-14313197 | None:intergenic | 20.0% |
| !!! | ATTTTTTTGCAGTATTCTTT+TGG | + | chr5.3:14316851-14316870 | MS.gene64910:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | + | chr5.3:14313547-14313566 | MS.gene64910:intron | 20.0% |
| !!! | GTCATTAAAAGATTAGTTTA+AGG | + | chr5.3:14317654-14317673 | MS.gene64910:CDS | 20.0% |
| !!! | TAATTGTGTGATTTTATATG+AGG | + | chr5.3:14311863-14311882 | MS.gene64910:intron | 20.0% |
| !!! | TAATTTGTTGCAGATAATTT+TGG | + | chr5.3:14316406-14316425 | MS.gene64910:intron | 20.0% |
| !!! | TAATTTTTATGTCTCTTTGT+CGG | - | chr5.3:14311836-14311855 | None:intergenic | 20.0% |
| !!! | TATTTTGGATTAATCAAAAG+TGG | + | chr5.3:14314277-14314296 | MS.gene64910:intron | 20.0% |
| !!! | TCAATTTGAAATTAAATGCT+AGG | - | chr5.3:14311637-14311656 | None:intergenic | 20.0% |
| !!! | TCAATTTGTTAAAATCACAA+TGG | - | chr5.3:14314369-14314388 | None:intergenic | 20.0% |
| !!! | TCATTTTTAAATGAAAGAGA+AGG | - | chr5.3:14314143-14314162 | None:intergenic | 20.0% |
| !!! | TTTGAAACAAACCTAAAATA+TGG | - | chr5.3:14312499-14312518 | None:intergenic | 20.0% |
| !!! | TTTTGTTTAACAAGTCAAAA+TGG | - | chr5.3:14316049-14316068 | None:intergenic | 20.0% |
| !!! | TTTTTTTGCAGTATTCTTTT+GGG | + | chr5.3:14316852-14316871 | MS.gene64910:intron | 20.0% |
| ! | AAAAAGTTCATGTACTAATG+AGG | - | chr5.3:14312039-14312058 | None:intergenic | 25.0% |
| ! | AAAGAAAAATTCAACTTGTG+AGG | - | chr5.3:14313678-14313697 | None:intergenic | 25.0% |
| ! | AAATGAAAGAGAAGGAAAAA+AGG | - | chr5.3:14314135-14314154 | None:intergenic | 25.0% |
| ! | ACATTCTTAGTTGAGTTATA+TGG | + | chr5.3:14315901-14315920 | MS.gene64910:intron | 25.0% |
| ! | AGCAATTTGATTAATTCCAA+TGG | + | chr5.3:14317005-14317024 | MS.gene64910:intron | 25.0% |
| ! | AGGTTGGAAAAAAAATTAGA+GGG | + | chr5.3:14313516-14313535 | MS.gene64910:intron | 25.0% |
| ! | ATAAGATGAAGAACTAATTG+AGG | - | chr5.3:14316554-14316573 | None:intergenic | 25.0% |
| ! | ATAGACATTATAAGCATATG+AGG | - | chr5.3:14314884-14314903 | None:intergenic | 25.0% |
| ! | ATCAATGTTAAAACTATGTC+TGG | - | chr5.3:14311919-14311938 | None:intergenic | 25.0% |
| ! | ATTATTTATGAGAGACTTGT+AGG | + | chr5.3:14312656-14312675 | MS.gene64910:intron | 25.0% |
| ! | ATTTCGGCAAAAACTAAATT+TGG | + | chr5.3:14314323-14314342 | MS.gene64910:intron | 25.0% |
| ! | CAATTTGATTAATTCCAATG+GGG | + | chr5.3:14317007-14317026 | MS.gene64910:intron | 25.0% |
| ! | GATCAACATTGTATATTGTA+TGG | + | chr5.3:14315759-14315778 | MS.gene64910:intron | 25.0% |
| ! | GCAATTTGATTAATTCCAAT+GGG | + | chr5.3:14317006-14317025 | MS.gene64910:intron | 25.0% |
| ! | GTCCTTATTAAAGCAAAATA+AGG | - | chr5.3:14316096-14316115 | None:intergenic | 25.0% |
| ! | TATAATGTTTGTTTAAGTCC+TGG | + | chr5.3:14315112-14315131 | MS.gene64910:intron | 25.0% |
| ! | TATATGTAACAAATCCATGA+TGG | - | chr5.3:14315096-14315115 | None:intergenic | 25.0% |
| ! | TATGATGTCTAAAAAATTGG+AGG | + | chr5.3:14312443-14312462 | MS.gene64910:intron | 25.0% |
| ! | TCAAGTTAAATATGATTGTG+TGG | + | chr5.3:14313187-14313206 | MS.gene64910:intron | 25.0% |
| ! | TCAATGTTAAAACTATGTCT+GGG | - | chr5.3:14311918-14311937 | None:intergenic | 25.0% |
| ! | TCCAAAAATAGTAAATCCTT+TGG | - | chr5.3:14313775-14313794 | None:intergenic | 25.0% |
| ! | TCCAAATAACATATATCTTG+TGG | + | chr5.3:14316691-14316710 | MS.gene64910:CDS | 25.0% |
| ! | TCCACAAGATATATGTTATT+TGG | - | chr5.3:14316695-14316714 | None:intergenic | 25.0% |
| ! | TGAAACAAACCTAAAATATG+GGG | - | chr5.3:14312497-14312516 | None:intergenic | 25.0% |
| ! | TGGAAATTAAATTTACTTCC+AGG | - | chr5.3:14315666-14315685 | None:intergenic | 25.0% |
| ! | TGTTGAAGATTTGATCTTAA+AGG | - | chr5.3:14312309-14312328 | None:intergenic | 25.0% |
| ! | TTAAAGAAGGAAGGTAAATA+TGG | - | chr5.3:14315620-14315639 | None:intergenic | 25.0% |
| ! | TTACTAGTAGTAAAACAACA+TGG | - | chr5.3:14311611-14311630 | None:intergenic | 25.0% |
| ! | TTAGTCAATGTTCAAGATTA+AGG | - | chr5.3:14316783-14316802 | None:intergenic | 25.0% |
| ! | TTCTTCACATTTAAGAATGT+GGG | - | chr5.3:14312909-14312928 | None:intergenic | 25.0% |
| ! | TTTGAACATACACATATTTG+AGG | + | chr5.3:14314396-14314415 | MS.gene64910:intron | 25.0% |
| ! | TTTGAACTCATATATACCAT+TGG | - | chr5.3:14314778-14314797 | None:intergenic | 25.0% |
| !! | ACCAAAGGATTTACTATTTT+TGG | + | chr5.3:14313771-14313790 | MS.gene64910:intron | 25.0% |
| !! | AGAATATTATGGTTAGTCAT+TGG | - | chr5.3:14315380-14315399 | None:intergenic | 25.0% |
| !! | AGAGTTCATATAATTTTGAG+TGG | - | chr5.3:14313379-14313398 | None:intergenic | 25.0% |
| !! | ATTATCTGATAATGAGTTGA+TGG | + | chr5.3:14317527-14317546 | MS.gene64910:CDS | 25.0% |
| !! | CCATTATAAAAGTAGCTTTT+GGG | + | chr5.3:14316909-14316928 | MS.gene64910:CDS | 25.0% |
| !! | CGATTTGAAACTCTTAAAAT+TGG | + | chr5.3:14313265-14313284 | MS.gene64910:intron | 25.0% |
| !! | GAATTTTTCTTTTAGTGGTT+AGG | + | chr5.3:14313686-14313705 | MS.gene64910:intron | 25.0% |
| !! | GTTGTTCCACTAAATATTTT+GGG | + | chr5.3:14311748-14311767 | MS.gene64910:intron | 25.0% |
| !! | TTAGGTTTGTTTCAAAACTT+TGG | + | chr5.3:14312503-14312522 | MS.gene64910:intron | 25.0% |
| !! | TTGATTTTATCAAACCATCA+TGG | + | chr5.3:14315079-14315098 | MS.gene64910:intron | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | + | chr5.3:14313546-14313565 | MS.gene64910:intron | 25.0% |
| !!! | GAATAATAAAGTGCTGAATT+TGG | + | chr5.3:14315799-14315818 | MS.gene64910:intron | 25.0% |
| !!! | GTCCTTATTTTGCTTTAATA+AGG | + | chr5.3:14316091-14316110 | MS.gene64910:intron | 25.0% |
| !!! | TAGTTGAATTTTTTTGACAC+AGG | + | chr5.3:14312795-14312814 | MS.gene64910:intron | 25.0% |
| !!! | TGATTTTATTTGAAGCATGT+AGG | + | chr5.3:14311946-14311965 | MS.gene64910:intron | 25.0% |
| !!! | TTTACAGAGTTGATGATTTT+AGG | + | chr5.3:14313886-14313905 | MS.gene64910:intron | 25.0% |
| AAACAATAATATGTAGGGAC+CGG | - | chr5.3:14312955-14312974 | None:intergenic | 30.0% | |
| AACATATATCTTGTGGACAT+GGG | + | chr5.3:14316698-14316717 | MS.gene64910:CDS | 30.0% | |
| AAGAAAGAAAATGAGTAGAC+AGG | - | chr5.3:14313342-14313361 | None:intergenic | 30.0% | |
| AAGAAGCTACTAGAATTGAT+GGG | - | chr5.3:14314462-14314481 | None:intergenic | 30.0% | |
| ACATTGAATCGCTGAAATTT+CGG | + | chr5.3:14314307-14314326 | MS.gene64910:intron | 30.0% | |
| AGAAAGAAAATGAGTAGACA+GGG | - | chr5.3:14313341-14313360 | None:intergenic | 30.0% | |
| AGGACTAAACTTAAAATTCG+TGG | - | chr5.3:14316076-14316095 | None:intergenic | 30.0% | |
| AGTAGATATTCTATGAAGCA+CGG | - | chr5.3:14317212-14317231 | None:intergenic | 30.0% | |
| AGTAGTAAAACAACATGGAA+GGG | - | chr5.3:14311606-14311625 | None:intergenic | 30.0% | |
| ATACCTGAAACAAAGCAAAA+TGG | - | chr5.3:14316577-14316596 | None:intergenic | 30.0% | |
| ATAGTAAAGTGGAACAAAGT+AGG | + | chr5.3:14314031-14314050 | MS.gene64910:CDS | 30.0% | |
| ATATTCATCTTGTTCCTCAA+AGG | - | chr5.3:14317505-14317524 | None:intergenic | 30.0% | |
| ATCATTAGAAGATGACTTCA+AGG | + | chr5.3:14315701-14315720 | MS.gene64910:CDS | 30.0% | |
| ATCCAAAATACACTTCTAGT+AGG | - | chr5.3:14314267-14314286 | None:intergenic | 30.0% | |
| ATCCAAGTTAACTGGTTATA+GGG | + | chr5.3:14314482-14314501 | MS.gene64910:intron | 30.0% | |
| ATTATATGCTCTTGTAACAC+AGG | + | chr5.3:14317076-14317095 | MS.gene64910:CDS | 30.0% | |
| ATTGACAACAATCATGTAGA+TGG | + | chr5.3:14317272-14317291 | MS.gene64910:intron | 30.0% | |
| ATTTCACTACCAATCAAGTT+AGG | + | chr5.3:14312353-14312372 | MS.gene64910:intron | 30.0% | |
| ATTTGATGAACAAACATCCA+AGG | + | chr5.3:14317317-14317336 | MS.gene64910:CDS | 30.0% | |
| ATTTGTGAAAACTCTTCTCA+AGG | - | chr5.3:14311453-14311472 | None:intergenic | 30.0% | |
| CAAACAAACACCTAAAATGA+GGG | + | chr5.3:14313458-14313477 | MS.gene64910:intron | 30.0% | |
| CATATAATACACCAAATGGT+GGG | + | chr5.3:14315223-14315242 | MS.gene64910:intron | 30.0% | |
| CATTCTTAAATGTGAAGAAG+TGG | + | chr5.3:14312910-14312929 | MS.gene64910:intron | 30.0% | |
| CCATGTCCACATAAATATAT+AGG | + | chr5.3:14313991-14314010 | MS.gene64910:CDS | 30.0% | |
| CCTATATATTTATGTGGACA+TGG | - | chr5.3:14313994-14314013 | None:intergenic | 30.0% | |
| CTTCTTCACATTTAAGAATG+TGG | - | chr5.3:14312910-14312929 | None:intergenic | 30.0% | |
| CTTTAAGCCTACAAATGTAT+TGG | - | chr5.3:14311783-14311802 | None:intergenic | 30.0% | |
| GAAAGTGAACTCATCATTAT+TGG | - | chr5.3:14317625-14317644 | None:intergenic | 30.0% | |
| GAGGTTGGAAAAAAAATTAG+AGG | + | chr5.3:14313515-14313534 | MS.gene64910:intron | 30.0% | |
| GCTTACAATAATTGGAATCA+AGG | - | chr5.3:14316330-14316349 | None:intergenic | 30.0% | |
| GTCACTAAAACAATGACTTT+AGG | - | chr5.3:14312469-14312488 | None:intergenic | 30.0% | |
| GTGTCACGATTTATTCAAAT+CGG | - | chr5.3:14313236-14313255 | None:intergenic | 30.0% | |
| GTTAGGAAATAGAGAAAAGA+AGG | + | chr5.3:14313703-14313722 | MS.gene64910:CDS | 30.0% | |
| GTTTGTTTCAAAACTTTGGA+TGG | + | chr5.3:14312507-14312526 | MS.gene64910:intron | 30.0% | |
| TAACATATATCTTGTGGACA+TGG | + | chr5.3:14316697-14316716 | MS.gene64910:CDS | 30.0% | |
| TAAGAAGCTACTAGAATTGA+TGG | - | chr5.3:14314463-14314482 | None:intergenic | 30.0% | |
| TAGACTTTAGTTGTTCTCAT+TGG | - | chr5.3:14316940-14316959 | None:intergenic | 30.0% | |
| TAGTAGTAAAACAACATGGA+AGG | - | chr5.3:14311607-14311626 | None:intergenic | 30.0% | |
| TATCCAAGTTAACTGGTTAT+AGG | + | chr5.3:14314481-14314500 | MS.gene64910:intron | 30.0% | |
| TCAAAAAATGTGGTTGCTTA+AGG | - | chr5.3:14312762-14312781 | None:intergenic | 30.0% | |
| TCAAGTGATATTAGCAAGAA+TGG | + | chr5.3:14316445-14316464 | MS.gene64910:CDS | 30.0% | |
| TCACCACCTATATATTTATG+TGG | - | chr5.3:14314000-14314019 | None:intergenic | 30.0% | |
| TCCAAAATACACTTCTAGTA+GGG | - | chr5.3:14314266-14314285 | None:intergenic | 30.0% | |
| TGTCACGATTTATTCAAATC+GGG | - | chr5.3:14313235-14313254 | None:intergenic | 30.0% | |
| TGTCCACATAAATATATAGG+TGG | + | chr5.3:14313994-14314013 | MS.gene64910:CDS | 30.0% | |
| TTATCATAGACTTGAAGAGT+TGG | - | chr5.3:14313805-14313824 | None:intergenic | 30.0% | |
| TTGACAACAATCATGTAGAT+GGG | + | chr5.3:14317273-14317292 | MS.gene64910:intron | 30.0% | |
| TTTGTGAAAACTCTTCTCAA+GGG | - | chr5.3:14311452-14311471 | None:intergenic | 30.0% | |
| ! | AAAAAGAAGCATGTAAAGCT+AGG | + | chr5.3:14317366-14317385 | MS.gene64910:CDS | 30.0% |
| ! | AAGTGGTGATAGAAAACTTT+TGG | + | chr5.3:14313486-14313505 | MS.gene64910:intron | 30.0% |
| ! | AGTGGTGATAGAAAACTTTT+GGG | + | chr5.3:14313487-14313506 | MS.gene64910:intron | 30.0% |
| ! | ATTTTTGTGCCTAACTTGAT+TGG | - | chr5.3:14312365-14312384 | None:intergenic | 30.0% |
| ! | CAGCTTTGTGAAACAATTTA+AGG | - | chr5.3:14314191-14314210 | None:intergenic | 30.0% |
| ! | CTGGTAAGAATTTTTACCAA+AGG | + | chr5.3:14313756-14313775 | MS.gene64910:intron | 30.0% |
| ! | GAGAAGAGTTTTCACAAATT+AGG | + | chr5.3:14311454-14311473 | MS.gene64910:CDS | 30.0% |
| ! | GAGTTTTCACAAATTAGGAA+CGG | + | chr5.3:14311459-14311478 | MS.gene64910:CDS | 30.0% |
| ! | GCCATTATAAAAGTAGCTTT+TGG | + | chr5.3:14316908-14316927 | MS.gene64910:CDS | 30.0% |
| ! | GCTAATCCGATATAATTTTC+AGG | + | chr5.3:14316281-14316300 | MS.gene64910:intron | 30.0% |
| ! | GGTTGTTCCACTAAATATTT+TGG | + | chr5.3:14311747-14311766 | MS.gene64910:intron | 30.0% |
| ! | TGTGTTACAAGAGCATATAA+TGG | - | chr5.3:14317077-14317096 | None:intergenic | 30.0% |
| ! | TTGTCAATTAGTTTAGTGCT+TGG | + | chr5.3:14312880-14312899 | MS.gene64910:intron | 30.0% |
| !! | AACTTACTACTAGAAGTACT+TGG | + | chr5.3:14314211-14314230 | MS.gene64910:intron | 30.0% |
| !! | ATCCGATATAATTTTCAGGA+TGG | + | chr5.3:14316285-14316304 | MS.gene64910:intron | 30.0% |
| !! | CAACACACTTAATTTTCAAG+AGG | - | chr5.3:14311986-14312005 | None:intergenic | 30.0% |
| !! | GCTTCTTTAGACAGTTTTAT+AGG | + | chr5.3:14315420-14315439 | MS.gene64910:CDS | 30.0% |
| !! | TCAGATAGATACTTTTGGTT+AGG | + | chr5.3:14316524-14316543 | MS.gene64910:CDS | 30.0% |
| !! | TCATACAAGTTTTTGGACTA+GGG | + | chr5.3:14314969-14314988 | MS.gene64910:CDS | 30.0% |
| !! | TTCCACTAAATATTTTGGGA+GGG | + | chr5.3:14311752-14311771 | MS.gene64910:intron | 30.0% |
| !!! | AACCACATTTTTTGAATGGA+GGG | + | chr5.3:14312767-14312786 | MS.gene64910:intron | 30.0% |
| !!! | AAGCAACCACATTTTTTGAA+TGG | + | chr5.3:14312763-14312782 | MS.gene64910:intron | 30.0% |
| !!! | CCCAAAAGCTACTTTTATAA+TGG | - | chr5.3:14316912-14316931 | None:intergenic | 30.0% |
| !!! | TATCCATTTTGCTTTGTTTC+AGG | + | chr5.3:14316571-14316590 | MS.gene64910:CDS | 30.0% |
| AAAACACATGAAAGACTGCT+AGG | - | chr5.3:14314565-14314584 | None:intergenic | 35.0% | |
| AACAAACCTAAAATATGGGG+AGG | - | chr5.3:14312494-14312513 | None:intergenic | 35.0% | |
| AACAATAATATGTAGGGACC+GGG | - | chr5.3:14312954-14312973 | None:intergenic | 35.0% | |
| AAGCTAGGAAAGACTACTAT+AGG | + | chr5.3:14317381-14317400 | MS.gene64910:CDS | 35.0% | |
| AGAATATGAGGATGTGTAAC+TGG | - | chr5.3:14314541-14314560 | None:intergenic | 35.0% | |
| AGCTTCTTATCCAAGTTAAC+TGG | + | chr5.3:14314474-14314493 | MS.gene64910:intron | 35.0% | |
| AGTCCATTCACAGATAAAAG+TGG | - | chr5.3:14314515-14314534 | None:intergenic | 35.0% | |
| ATGCTAGTGCTACATTTGAA+AGG | - | chr5.3:14312574-14312593 | None:intergenic | 35.0% | |
| CCAAACAAACACCTAAAATG+AGG | + | chr5.3:14313457-14313476 | MS.gene64910:intron | 35.0% | |
| CGCCATCCTGAAAATTATAT+CGG | - | chr5.3:14316290-14316309 | None:intergenic | 35.0% | |
| CTAAAATGAGGGATCAAAAG+TGG | + | chr5.3:14313469-14313488 | MS.gene64910:intron | 35.0% | |
| GAGAAGGAAAAAAGGAAACA+TGG | - | chr5.3:14314127-14314146 | None:intergenic | 35.0% | |
| GAGAGACATATAGTTGTACA+AGG | + | chr5.3:14316482-14316501 | MS.gene64910:CDS | 35.0% | |
| GCATATAATACACCAAATGG+TGG | + | chr5.3:14315222-14315241 | MS.gene64910:intron | 35.0% | |
| GCTGCATATAATACACCAAA+TGG | + | chr5.3:14315219-14315238 | MS.gene64910:intron | 35.0% | |
| GTCACGATTTATTCAAATCG+GGG | - | chr5.3:14313234-14313253 | None:intergenic | 35.0% | |
| GTTTCTCACCATGAATGTTT+AGG | - | chr5.3:14315880-14315899 | None:intergenic | 35.0% | |
| TATCTACCTTCAAAAGACAC+TGG | - | chr5.3:14314060-14314079 | None:intergenic | 35.0% | |
| TGTAATCATATGTGTCGTGT+CGG | + | chr5.3:14317134-14317153 | MS.gene64910:intron | 35.0% | |
| TTCCCTCCATTCAAAAAATG+TGG | - | chr5.3:14312772-14312791 | None:intergenic | 35.0% | |
| TTCTTGCTCCTAAACATTCA+TGG | + | chr5.3:14315869-14315888 | MS.gene64910:CDS | 35.0% | |
| ! | AAGGCTCAGATAGATACTTT+TGG | + | chr5.3:14316519-14316538 | MS.gene64910:CDS | 35.0% |
| ! | CACTTTTGATCCCTCATTTT+AGG | - | chr5.3:14313471-14313490 | None:intergenic | 35.0% |
| ! | CATCCAAGGCATTAAAGAAA+TGG | + | chr5.3:14317331-14317350 | MS.gene64910:CDS | 35.0% |
| ! | GTGGTGATAGAAAACTTTTG+GGG | + | chr5.3:14313488-14313507 | MS.gene64910:intron | 35.0% |
| ! | TCAGAGCTCATACAAGTTTT+TGG | + | chr5.3:14314962-14314981 | MS.gene64910:CDS | 35.0% |
| ! | TCTTGTTTGTGTCTCTTCTA+TGG | + | chr5.3:14311310-14311329 | MS.gene64910:CDS | 35.0% |
| !! | CAAGACAATTTGTTATGCCA+CGG | - | chr5.3:14311672-14311691 | None:intergenic | 35.0% |
| !! | CCTCATTTTAGGTGTTTGTT+TGG | - | chr5.3:14313460-14313479 | None:intergenic | 35.0% |
| !! | CTCATACAAGTTTTTGGACT+AGG | + | chr5.3:14314968-14314987 | MS.gene64910:CDS | 35.0% |
| !! | GAACCACTTTTATCTGTGAA+TGG | + | chr5.3:14314509-14314528 | MS.gene64910:CDS | 35.0% |
| !! | GTTCCACTAAATATTTTGGG+AGG | + | chr5.3:14311751-14311770 | MS.gene64910:intron | 35.0% |
| !! | TCACGTTTTGTTGGAAATCA+AGG | - | chr5.3:14313422-14313441 | None:intergenic | 35.0% |
| !!! | CAACCACATTTTTTGAATGG+AGG | + | chr5.3:14312766-14312785 | MS.gene64910:intron | 35.0% |
| !!! | TTGCAGATAATTTTGGCTGT+TGG | + | chr5.3:14316413-14316432 | MS.gene64910:intron | 35.0% |
| AAAACTCTTCTCAAGGGCTA+TGG | - | chr5.3:14311446-14311465 | None:intergenic | 40.0% | |
| AAAGACTACTATAGGAACCG+TGG | + | chr5.3:14317389-14317408 | MS.gene64910:CDS | 40.0% | |
| AACACGATCTTCAACCTTTG+AGG | + | chr5.3:14317488-14317507 | MS.gene64910:CDS | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | + | chr5.3:14315191-14315210 | MS.gene64910:intron | 40.0% | |
| AATGCTTCTTGGAAGACTCA+AGG | + | chr5.3:14314598-14314617 | MS.gene64910:CDS | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | + | chr5.3:14315192-14315211 | MS.gene64910:intron | 40.0% | |
| ACTTGATCAAACACCGACAT+GGG | + | chr5.3:14311384-14311403 | MS.gene64910:CDS | 40.0% | |
| AGAAACCAGATTAGCAAGAC+TGG | - | chr5.3:14315021-14315040 | None:intergenic | 40.0% | |
| AGACTGCTAGGAAGAATATG+AGG | - | chr5.3:14314553-14314572 | None:intergenic | 40.0% | |
| AGCCTACAAATGTATTGGAC+CGG | - | chr5.3:14311778-14311797 | None:intergenic | 40.0% | |
| ATAATCTGTGATCCGAAACC+CGG | + | chr5.3:14312933-14312952 | MS.gene64910:intron | 40.0% | |
| ATAGAATTTATGGAGGGACG+AGG | + | chr5.3:14316182-14316201 | MS.gene64910:intron | 40.0% | |
| ATGAGCAAGAAGCAGAAGAT+AGG | + | chr5.3:14317580-14317599 | MS.gene64910:CDS | 40.0% | |
| ATTTACTTCCAGGAGCTAGA+TGG | - | chr5.3:14315656-14315675 | None:intergenic | 40.0% | |
| CGTGTTACAATTTCTGTGCA+TGG | - | chr5.3:14313307-14313326 | None:intergenic | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | + | chr5.3:14315197-14315216 | MS.gene64910:intron | 40.0% | |
| CTGCATTGTTGATCCAACAA+TGG | - | chr5.3:14317424-14317443 | None:intergenic | 40.0% | |
| CTTCACCGTTTCAAAACTAC+TGG | + | chr5.3:14317459-14317478 | MS.gene64910:CDS | 40.0% | |
| CTTCTATGGAGGTTTATCCA+TGG | + | chr5.3:14311324-14311343 | MS.gene64910:CDS | 40.0% | |
| GACTGGACGCACAATATAAA+AGG | - | chr5.3:14315004-14315023 | None:intergenic | 40.0% | |
| GAGGAAGAGACTTTAACTCA+TGG | + | chr5.3:14314741-14314760 | MS.gene64910:CDS | 40.0% | |
| GAGGGACTAAAACGAAAAGT+TGG | + | chr5.3:14313534-14313553 | MS.gene64910:intron | 40.0% | |
| GCTGGAAAATTGTTTCCGTT+TGG | + | chr5.3:14316874-14316893 | MS.gene64910:CDS | 40.0% | |
| GTCATGTGACTGAAAAGTCA+CGG | + | chr5.3:14315154-14315173 | MS.gene64910:intron | 40.0% | |
| GTCCCTATAACCAGTTAACT+TGG | - | chr5.3:14314487-14314506 | None:intergenic | 40.0% | |
| TAAATCCATTGCGCAAAGTC+TGG | - | chr5.3:14315466-14315485 | None:intergenic | 40.0% | |
| TAGGTGTTTGTTTGGATGTG+CGG | - | chr5.3:14313452-14313471 | None:intergenic | 40.0% | |
| TATGAAGCACGGACAATCTT+CGG | - | chr5.3:14317201-14317220 | None:intergenic | 40.0% | |
| TGGCAAGCTTATAGTCCAAA+CGG | - | chr5.3:14316892-14316911 | None:intergenic | 40.0% | |
| TGTTTGTGTCTCTTCTATGG+AGG | + | chr5.3:14311313-14311332 | MS.gene64910:CDS | 40.0% | |
| TTAATTCCAATGGGGTTTGC+AGG | + | chr5.3:14317015-14317034 | MS.gene64910:intron | 40.0% | |
| TTTAAACAGTCCTGTCCTCT+GGG | + | chr5.3:14315832-14315851 | MS.gene64910:intron | 40.0% | |
| ! | AGGAAACCAGTGTCTTTTGA+AGG | + | chr5.3:14314051-14314070 | MS.gene64910:CDS | 40.0% |
| ! | ATCTAGGAGGCGCAAATTTA+TGG | + | chr5.3:14316213-14316232 | MS.gene64910:intron | 40.0% |
| ! | ATTGAAGTTTTCTCTTGCCG+TGG | + | chr5.3:14311652-14311671 | MS.gene64910:intron | 40.0% |
| ! | CAATCATGTAGATGGGTTCA+AGG | + | chr5.3:14317280-14317299 | MS.gene64910:intron | 40.0% |
| ! | CTTACCCTGTTTTACACAAG+AGG | - | chr5.3:14315199-14315218 | None:intergenic | 40.0% |
| ! | GTTTTATAGGTCTGTGCGTA+AGG | + | chr5.3:14315433-14315452 | MS.gene64910:CDS | 40.0% |
| ! | TCTAGGAGGCGCAAATTTAT+GGG | + | chr5.3:14316214-14316233 | MS.gene64910:intron | 40.0% |
| ! | TTTGCAGTATTCTTTTGGGC+TGG | + | chr5.3:14316856-14316875 | MS.gene64910:intron | 40.0% |
| ! | TTTGGAGCTTCGCAAAATCA+CGG | + | chr5.3:14314341-14314360 | MS.gene64910:intron | 40.0% |
| ! | TTTTAAACAGTCCTGTCCTC+TGG | + | chr5.3:14315831-14315850 | MS.gene64910:intron | 40.0% |
| !! | ACTAAATATTTTGGGAGGGC+CGG | + | chr5.3:14311756-14311775 | MS.gene64910:intron | 40.0% |
| !! | AGAAAACTTTTGGGGACTAG+AGG | + | chr5.3:14313496-14313515 | MS.gene64910:intron | 40.0% |
| !! | GCATGTAGGACATTGATTTG+TGG | + | chr5.3:14311960-14311979 | MS.gene64910:intron | 40.0% |
| !! | GCCCTACTAGAAGTGTATTT+TGG | + | chr5.3:14314262-14314281 | MS.gene64910:intron | 40.0% |
| !! | GTGCCATTTCTTTAATGCCT+TGG | - | chr5.3:14317337-14317356 | None:intergenic | 40.0% |
| !! | TCTGCTTGAAGCTCTAGAAA+AGG | + | chr5.3:14313727-14313746 | MS.gene64910:CDS | 40.0% |
| !! | TGAAGCTCTAGAAAAGGTCA+AGG | + | chr5.3:14313733-14313752 | MS.gene64910:CDS | 40.0% |
| !!! | AGTGGCCAGTAGTTTTGAAA+CGG | - | chr5.3:14317467-14317486 | None:intergenic | 40.0% |
| !!! | GTTTTGTTTCTGCAGATACG+TGG | + | chr5.3:14314705-14314724 | MS.gene64910:intron | 40.0% |
| AAAGTCACGGACTCAAGTCA+TGG | + | chr5.3:14315167-14315186 | MS.gene64910:intron | 45.0% | |
| AACAAACATTATGGGCAGCC+CGG | - | chr5.3:14315289-14315308 | None:intergenic | 45.0% | |
| AATATGTAGGGACCGGGTTT+CGG | - | chr5.3:14312948-14312967 | None:intergenic | 45.0% | |
| ACTACTATAGGAACCGTGGA+TGG | + | chr5.3:14317393-14317412 | MS.gene64910:CDS | 45.0% | |
| AGAAGATAGGCATCACAGTG+AGG | + | chr5.3:14317593-14317612 | MS.gene64910:CDS | 45.0% | |
| AGATACGTGGATGGAAGGAA+TGG | + | chr5.3:14314718-14314737 | MS.gene64910:intron | 45.0% | |
| AGATGACTTCAAGGTAGTCG+TGG | + | chr5.3:14315710-14315729 | MS.gene64910:CDS | 45.0% | |
| AGGATGGCGTACTCCAATAT+GGG | + | chr5.3:14316301-14316320 | MS.gene64910:intron | 45.0% | |
| AGGTTGAAGATCGTGTTGAG+TGG | - | chr5.3:14317485-14317504 | None:intergenic | 45.0% | |
| AGTGCTGTCACAATGCTTCT+TGG | + | chr5.3:14314587-14314606 | MS.gene64910:CDS | 45.0% | |
| ATTGCTGCCAAACTAGCACA+AGG | - | chr5.3:14316011-14316030 | None:intergenic | 45.0% | |
| CAAGGAATGCCTCTTGTTCA+AGG | + | chr5.3:14316500-14316519 | MS.gene64910:CDS | 45.0% | |
| CACTTGATCAAACACCGACA+TGG | + | chr5.3:14311383-14311402 | MS.gene64910:CDS | 45.0% | |
| CATGGTTATGAGTTCGCCAA+TGG | + | chr5.3:14314759-14314778 | MS.gene64910:CDS | 45.0% | |
| CGAGGAGAACTAAATCTAGG+AGG | + | chr5.3:14316200-14316219 | MS.gene64910:intron | 45.0% | |
| CTATCTGAGCCTTGAACAAG+AGG | - | chr5.3:14316512-14316531 | None:intergenic | 45.0% | |
| CTGCAACTGCAAGTGATAGT+AGG | + | chr5.3:14311347-14311366 | MS.gene64910:CDS | 45.0% | |
| CTTGATCAAACACCGACATG+GGG | + | chr5.3:14311385-14311404 | MS.gene64910:CDS | 45.0% | |
| GAAGAGTAATGTAGCTGCAG+AGG | - | chr5.3:14317055-14317074 | None:intergenic | 45.0% | |
| GAAGATAGGCATCACAGTGA+GGG | + | chr5.3:14317594-14317613 | MS.gene64910:CDS | 45.0% | |
| GATACGTGGATGGAAGGAAT+GGG | + | chr5.3:14314719-14314738 | MS.gene64910:intron | 45.0% | |
| GATGACTTCAAGGTAGTCGT+GGG | + | chr5.3:14315711-14315730 | MS.gene64910:CDS | 45.0% | |
| GATTACCAGACTTTGCGCAA+TGG | + | chr5.3:14315458-14315477 | MS.gene64910:CDS | 45.0% | |
| GATTATCCGTGTCACAGTGT+CGG | - | chr5.3:14317179-14317198 | None:intergenic | 45.0% | |
| GGAATCAAGGATGCCCATAT+TGG | - | chr5.3:14316317-14316336 | None:intergenic | 45.0% | |
| GGACGAGGAGAACTAAATCT+AGG | + | chr5.3:14316197-14316216 | MS.gene64910:intron | 45.0% | |
| GGCCCTCCCAAAATATTTAG+TGG | - | chr5.3:14311757-14311776 | None:intergenic | 45.0% | |
| GTGCAGATGCTGCAAAATTC+AGG | + | chr5.3:14314917-14314936 | MS.gene64910:intron | 45.0% | |
| TACCTTCCTGCTGCATTTGA+AGG | - | chr5.3:14314103-14314122 | None:intergenic | 45.0% | |
| TAGCACTCCTTGTGCTAGTT+TGG | + | chr5.3:14316001-14316020 | MS.gene64910:intron | 45.0% | |
| TCGGGGCACAATTTGAAGAA+CGG | - | chr5.3:14313217-14313236 | None:intergenic | 45.0% | |
| TTCCTGCTGCATTTGAAGGA+GGG | - | chr5.3:14314099-14314118 | None:intergenic | 45.0% | |
| ! | GTGCTAGTTTGGCAGCAATT+TGG | + | chr5.3:14316012-14316031 | MS.gene64910:intron | 45.0% |
| ! | TGACAGCCTCCCCATATTTT+AGG | + | chr5.3:14312485-14312504 | MS.gene64910:intron | 45.0% |
| ! | TGGTGCACGACATTTTTACG+AGG | - | chr5.3:14315360-14315379 | None:intergenic | 45.0% |
| ! | TGTTTCTGCAGATACGTGGA+TGG | + | chr5.3:14314709-14314728 | MS.gene64910:intron | 45.0% |
| !! | AACAATGGTGCTACCATCCA+CGG | - | chr5.3:14317409-14317428 | None:intergenic | 45.0% |
| !! | AACTTTTGGGGACTAGAGGT+TGG | + | chr5.3:14313500-14313519 | MS.gene64910:intron | 45.0% |
| !! | TAGCACAAGGAGTGCTAGAA+CGG | - | chr5.3:14315998-14316017 | None:intergenic | 45.0% |
| !!! | GTTTTGAAACGGTGAAGTGC+TGG | - | chr5.3:14317456-14317475 | None:intergenic | 45.0% |
| !! | AATTATTATTATGAAATAAA+GGG | - | chr5.3:14311725-14311744 | None:intergenic | 5.0% |
| !! | TAATTATTATTATGAAATAA+AGG | - | chr5.3:14311726-14311745 | None:intergenic | 5.0% |
| !! | TTATTTCATAATAATAATTA+TGG | + | chr5.3:14311726-14311745 | MS.gene64910:intron | 5.0% |
| AAACTACAGCTGATGCCCAG+AGG | - | chr5.3:14315850-14315869 | None:intergenic | 50.0% | |
| ACAACTTTACCAGTTGCGCC+AGG | - | chr5.3:14315133-14315152 | None:intergenic | 50.0% | |
| ACTTGTCCGACACTGTGACA+CGG | + | chr5.3:14317170-14317189 | MS.gene64910:intron | 50.0% | |
| ATCACTTGCAGTTGCAGCCA+TGG | - | chr5.3:14311344-14311363 | None:intergenic | 50.0% | |
| CACAATCCTGCAAACCCCAT+TGG | - | chr5.3:14317024-14317043 | None:intergenic | 50.0% | |
| CAGGATGGCGTACTCCAATA+TGG | + | chr5.3:14316300-14316319 | MS.gene64910:intron | 50.0% | |
| CTCCTTCAAATGCAGCAGGA+AGG | + | chr5.3:14314098-14314117 | MS.gene64910:CDS | 50.0% | |
| CTCTGCAACAACAATTGCGC+AGG | - | chr5.3:14315541-14315560 | None:intergenic | 50.0% | |
| CTTCCTGCTGCATTTGAAGG+AGG | - | chr5.3:14314100-14314119 | None:intergenic | 50.0% | |
| GGCCGGTCCAATACATTTGT+AGG | + | chr5.3:14311773-14311792 | MS.gene64910:intron | 50.0% | |
| GTGGATGGTAGCACCATTGT+TGG | + | chr5.3:14317408-14317427 | MS.gene64910:CDS | 50.0% | |
| TCAAGGTAGTCGTGGGAGTA+AGG | + | chr5.3:14315718-14315737 | MS.gene64910:CDS | 50.0% | |
| TCTGCAGATACGTGGATGGA+AGG | + | chr5.3:14314713-14314732 | MS.gene64910:intron | 50.0% | |
| TGCGTCCAGTCTTGCTAATC+TGG | + | chr5.3:14315013-14315032 | MS.gene64910:intron | 50.0% | |
| TGTTTAAGTCCTGGCGCAAC+TGG | + | chr5.3:14315121-14315140 | MS.gene64910:intron | 50.0% | |
| ! | CATATGTGTCGTGTCGGTGT+CGG | + | chr5.3:14317140-14317159 | MS.gene64910:intron | 50.0% |
| ! | GGCTGCAACTCACGTTTTGT+TGG | - | chr5.3:14313431-14313450 | None:intergenic | 50.0% |
| ! | GTATAGGTCCATCTAGCTCC+TGG | + | chr5.3:14315645-14315664 | MS.gene64910:intron | 50.0% |
| !! | GCTCTAGAAAAGGTCAAGGC+TGG | + | chr5.3:14313737-14313756 | MS.gene64910:CDS | 50.0% |
| ACAGCAGCAACACCCCATGT+CGG | - | chr5.3:14311400-14311419 | None:intergenic | 55.0% | |
| ACGTGGATGGAAGGAATGGG+AGG | + | chr5.3:14314722-14314741 | MS.gene64910:CDS | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr5.3:14315263-14315282 | None:intergenic | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr5.3:14315262-14315281 | None:intergenic | 55.0% | |
| CTCCCTCCTTCAAATGCAGC+AGG | + | chr5.3:14314094-14314113 | MS.gene64910:CDS | 55.0% | |
| GGATCAACAATGCAGTCCCC+TGG | + | chr5.3:14317429-14317448 | MS.gene64910:CDS | 55.0% | |
| ! | CAAATGGTGGGACTCCTTCC+CGG | + | chr5.3:14315235-14315254 | MS.gene64910:intron | 55.0% |
| !! | AAACGGTGAAGTGCTGGTCC+AGG | - | chr5.3:14317450-14317469 | None:intergenic | 55.0% |
| !! | AACGGTGAAGTGCTGGTCCA+GGG | - | chr5.3:14317449-14317468 | None:intergenic | 55.0% |
| ACAGCTGATGCCCAGAGGAC+AGG | - | chr5.3:14315845-14315864 | None:intergenic | 60.0% | |
| CGGGAAGGAGTCCCACCATT+TGG | - | chr5.3:14315237-14315256 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr5.3:14315250-14315269 | MS.gene64910:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr5.3:14315251-14315270 | MS.gene64910:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr5.3:14315267-14315286 | MS.gene64910:intron | 60.0% |
| !! | ACGGTGAAGTGCTGGTCCAG+GGG | - | chr5.3:14317448-14317467 | None:intergenic | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr5.3:14315252-14315271 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr5.3:14315256-14315275 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr5.3:14315257-14315276 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr5.3:14315268-14315287 | MS.gene64910:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 14311292 | 14317674 | 14311292 | ID=MS.gene64910 |
| chr5.3 | mRNA | 14311292 | 14317674 | 14311292 | ID=MS.gene64910.t1;Parent=MS.gene64910 |
| chr5.3 | exon | 14311292 | 14311480 | 14311292 | ID=MS.gene64910.t1.exon1;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14311292 | 14311480 | 14311292 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14313701 | 14313758 | 14313701 | ID=MS.gene64910.t1.exon2;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14313701 | 14313758 | 14313701 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14313893 | 14314119 | 14313893 | ID=MS.gene64910.t1.exon3;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14313893 | 14314119 | 14313893 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14314503 | 14314619 | 14314503 | ID=MS.gene64910.t1.exon4;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14314503 | 14314619 | 14314503 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14314720 | 14314780 | 14314720 | ID=MS.gene64910.t1.exon5;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14314720 | 14314780 | 14314720 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14314923 | 14315011 | 14314923 | ID=MS.gene64910.t1.exon6;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14314923 | 14315011 | 14314923 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14315416 | 14315490 | 14315416 | ID=MS.gene64910.t1.exon7;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14315416 | 14315490 | 14315416 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14315651 | 14315739 | 14315651 | ID=MS.gene64910.t1.exon8;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14315651 | 14315739 | 14315651 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14315841 | 14315890 | 14315841 | ID=MS.gene64910.t1.exon9;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14315841 | 14315890 | 14315841 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14316303 | 14316343 | 14316303 | ID=MS.gene64910.t1.exon10;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14316303 | 14316343 | 14316303 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14316419 | 14316592 | 14316419 | ID=MS.gene64910.t1.exon11;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14316419 | 14316592 | 14316419 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14316684 | 14316719 | 14316684 | ID=MS.gene64910.t1.exon12;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14316684 | 14316719 | 14316684 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14316863 | 14316930 | 14316863 | ID=MS.gene64910.t1.exon13;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14316863 | 14316930 | 14316863 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14317037 | 14317097 | 14317037 | ID=MS.gene64910.t1.exon14;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14317037 | 14317097 | 14317037 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| chr5.3 | exon | 14317291 | 14317674 | 14317291 | ID=MS.gene64910.t1.exon15;Parent=MS.gene64910.t1 |
| chr5.3 | CDS | 14317291 | 14317674 | 14317291 | ID=cds.MS.gene64910.t1;Parent=MS.gene64910.t1 |
| Gene Sequence |
| Protein sequence |
