AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene66954

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66954.t1 MTR_6g033070 98.066 517 10 0 94 610 22 538 0.0 1040
MS.gene66954.t1 MTR_1g054630 35.266 414 252 5 206 606 148 558 1.59e-77 258
MS.gene66954.t1 MTR_2g100230 34.398 407 252 7 188 588 73 470 1.27e-75 249
MS.gene66954.t1 MTR_3g083690 34.783 414 252 6 204 602 137 547 8.68e-75 251
MS.gene66954.t1 MTR_4g114120 35.377 424 252 6 206 610 134 554 7.25e-71 241
MS.gene66954.t1 MTR_6g005550 33.941 439 271 9 178 610 130 555 9.64e-71 242
MS.gene66954.t1 MTR_3g467550 34.135 416 255 8 184 583 86 498 1.24e-70 238
MS.gene66954.t1 MTR_4g134170 32.304 421 252 8 193 588 267 679 1.40e-68 236
MS.gene66954.t1 MTR_6g005320 31.591 421 253 8 193 588 229 639 6.56e-68 233
MS.gene66954.t1 MTR_3g467550 34.828 379 231 7 218 583 92 467 5.13e-67 228
MS.gene66954.t1 MTR_4g105100 31.818 418 271 8 190 603 179 586 1.12e-65 226
MS.gene66954.t1 MTR_2g032630 33.413 416 262 7 182 588 460 869 1.76e-63 227
MS.gene66954.t1 MTR_1g095810 31.090 431 280 9 192 609 124 550 2.71e-62 216
MS.gene66954.t1 MTR_3g467550 34.521 365 224 6 184 536 86 447 1.02e-61 211
MS.gene66954.t1 MTR_1g026830 30.465 430 276 9 192 605 126 548 1.26e-60 212
MS.gene66954.t1 MTR_7g109720 30.549 419 274 8 181 590 199 609 3.59e-57 206
MS.gene66954.t1 MTR_5g027840 33.420 386 249 7 209 589 101 483 6.25e-55 195
MS.gene66954.t1 MTR_2g007000 30.673 401 269 6 193 588 484 880 5.65e-54 199
MS.gene66954.t1 MTR_7g100820 29.902 408 267 8 193 592 110 506 2.22e-51 187
MS.gene66954.t1 MTR_4g105100 32.362 343 223 7 195 533 184 521 2.67e-51 185
MS.gene66954.t1 MTR_7g056830 32.303 356 227 5 212 563 10 355 2.05e-50 181
MS.gene66954.t1 MTR_6g082080 32.303 356 227 5 212 563 10 355 3.81e-50 180
MS.gene66954.t1 MTR_3g049990 30.579 363 242 6 212 570 152 508 3.07e-49 183
MS.gene66954.t1 MTR_4g125970 32.143 364 235 6 212 573 41 394 3.84e-48 174
MS.gene66954.t1 MTR_2g039960 31.868 364 236 6 212 573 41 394 5.53e-48 173
MS.gene66954.t1 MTR_4g125970 32.143 364 235 6 212 573 58 411 6.21e-48 174
MS.gene66954.t1 MTR_2g041140 30.790 367 237 8 212 570 141 498 1.16e-47 178
MS.gene66954.t1 MTR_2g099620 31.978 369 229 7 212 573 25 378 1.46e-47 172
MS.gene66954.t1 MTR_2g099620 31.978 369 229 7 212 573 41 394 1.84e-47 172
MS.gene66954.t1 MTR_8g018400 31.593 364 237 6 212 573 41 394 2.79e-47 171
MS.gene66954.t1 MTR_7g076830 31.198 359 229 6 213 567 144 488 1.20e-46 172
MS.gene66954.t1 MTR_7g076800 31.198 359 229 6 213 567 142 486 1.27e-46 172
MS.gene66954.t1 MTR_7g076820 31.198 359 229 6 213 567 151 495 3.22e-46 171
MS.gene66954.t1 MTR_5g090120 30.495 364 241 9 211 569 80 436 4.99e-46 172
MS.gene66954.t1 MTR_2g438110 28.226 372 239 6 212 573 34 387 6.25e-46 167
MS.gene66954.t1 MTR_2g066050 30.233 387 250 7 212 593 53 424 4.25e-45 167
MS.gene66954.t1 MTR_3g449250 30.811 370 242 7 204 568 82 442 1.41e-44 167
MS.gene66954.t1 MTR_3g449250 30.811 370 242 7 204 568 82 442 1.67e-44 167
MS.gene66954.t1 MTR_4g079320 28.117 377 263 4 213 587 20 390 1.83e-44 169
MS.gene66954.t1 MTR_2g055850 31.405 363 226 11 212 562 91 442 3.02e-39 152
MS.gene66954.t1 MTR_4g059460 27.778 450 249 11 212 589 44 489 9.67e-39 151
MS.gene66954.t1 MTR_1g012420 30.458 371 233 9 203 563 38 393 1.19e-38 148
MS.gene66954.t1 MTR_3g107420 29.847 392 243 10 182 563 24 393 1.52e-38 147
MS.gene66954.t1 MTR_4g010565 29.455 404 255 10 203 593 115 501 3.24e-38 148
MS.gene66954.t1 MTR_2g043360 27.529 425 231 10 212 562 41 462 1.25e-37 148
MS.gene66954.t1 MTR_3g071620 29.600 375 222 12 218 562 22 384 4.21e-37 146
MS.gene66954.t1 MTR_6g039840 27.344 384 261 9 210 578 108 488 1.20e-36 145
MS.gene66954.t1 MTR_4g112340 31.988 347 210 15 230 562 115 449 4.61e-36 143
MS.gene66954.t1 MTR_8g027775 29.834 362 241 10 213 562 103 463 1.18e-35 142
MS.gene66954.t1 MTR_7g057250 26.353 425 241 9 218 573 169 590 3.24e-34 139
MS.gene66954.t1 MTR_8g027770 30.458 371 227 13 213 562 202 562 5.23e-34 137
MS.gene66954.t1 MTR_6g056080 27.988 343 232 6 236 569 127 463 6.24e-34 137
MS.gene66954.t1 MTR_8g027780 29.834 362 241 10 213 562 107 467 2.21e-33 135
MS.gene66954.t1 MTR_0915s0010 30.612 294 186 6 226 515 3 282 3.20e-33 129
MS.gene66954.t1 MTR_1g102410 25.199 377 251 6 218 569 50 420 1.02e-32 134
MS.gene66954.t1 MTR_3g118120 24.868 378 255 9 212 562 132 507 2.14e-30 125
MS.gene66954.t1 MTR_5g092560 26.567 335 233 9 235 562 99 427 3.75e-29 123
MS.gene66954.t1 MTR_1g083130 25.917 409 250 12 212 573 26 428 5.54e-28 119
MS.gene66954.t1 MTR_8g097000 27.073 410 272 12 189 576 259 663 1.58e-27 118
MS.gene66954.t1 MTR_1g061970 27.034 381 237 11 212 562 80 449 3.26e-27 115
MS.gene66954.t1 MTR_4g068990 26.269 335 233 9 235 562 99 426 2.00e-26 115
MS.gene66954.t1 MTR_8g027780 29.909 331 219 10 213 531 107 436 1.23e-25 110
MS.gene66954.t1 MTR_4g459350 35.000 180 113 4 212 388 41 219 5.11e-25 105
MS.gene66954.t1 MTR_6g039840 26.384 307 210 8 285 578 9 312 1.11e-24 108
MS.gene66954.t1 MTR_4g049910 26.702 382 235 10 212 569 55 415 1.75e-23 104
MS.gene66954.t1 MTR_4g077370 34.975 203 121 5 211 409 249 444 7.08e-23 102
MS.gene66954.t1 MTR_4g077370 34.419 215 105 6 211 416 1 188 2.68e-21 97.4
MS.gene66954.t1 MTR_1g046570 26.343 391 234 12 227 578 6 381 1.22e-22 100
MS.gene66954.t1 MTR_4g112320 28.727 275 167 12 300 562 10 267 1.84e-22 100
MS.gene66954.t1 MTR_4g131750 25.479 365 233 8 217 551 87 442 5.29e-22 100
MS.gene66954.t1 MTR_8g032230 37.324 142 83 2 210 351 8 143 5.34e-22 94.0
MS.gene66954.t1 MTR_5g069330 24.384 365 256 9 206 563 1 352 1.79e-20 94.7
MS.gene66954.t1 MTR_5g069330 24.513 359 251 9 212 563 3 348 2.17e-20 94.4
MS.gene66954.t1 MTR_5g077690 23.851 457 270 14 209 595 28 476 2.56e-20 95.1
MS.gene66954.t1 MTR_8g018370 25.816 337 213 9 241 573 2 305 1.85e-19 90.1
MS.gene66954.t1 MTR_2g043360 22.630 327 181 6 307 562 19 344 1.46e-18 89.4
MS.gene66954.t1 MTR_2g063080 27.160 243 150 6 203 418 98 340 2.42e-18 89.0
MS.gene66954.t1 MTR_3g107420 28.571 245 145 8 182 416 24 248 6.50e-17 82.4
MS.gene66954.t1 MTR_8g042690 23.034 356 219 12 235 562 41 369 3.21e-16 82.0
MS.gene66954.t1 MTR_5g092560 25.822 213 149 6 356 562 7 216 1.70e-13 73.6
MS.gene66954.t1 MTR_2g006440 26.027 365 213 15 223 561 398 731 2.52e-13 73.9
MS.gene66954.t1 MTR_4g068990 25.822 213 148 7 356 562 7 215 6.47e-13 72.0
MS.gene66954.t1 MTR_2g042440 24.658 365 224 14 230 570 39 376 9.54e-12 68.6
MS.gene66954.t1 MTR_2g042440 24.658 365 224 14 230 570 39 376 9.63e-12 68.6
MS.gene66954.t1 MTR_3g063040 23.284 335 213 11 236 553 19 326 1.14e-11 68.6
MS.gene66954.t1 MTR_8g080160 23.641 368 224 12 221 565 266 599 2.42e-11 67.4
MS.gene66954.t1 MTR_8g062720 27.962 211 125 7 211 403 90 291 3.10e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66954.t1 AT3G02065 65.927 496 146 4 99 590 14 490 0.0 677
MS.gene66954.t1 AT3G02065 65.927 496 146 4 99 590 14 490 0.0 677
MS.gene66954.t1 AT3G02065 71.105 353 101 1 239 590 1 353 0.0 531
MS.gene66954.t1 AT1G55150 33.170 407 257 7 189 588 76 474 7.80e-75 248
MS.gene66954.t1 AT1G55150 33.170 407 257 7 189 588 101 499 4.23e-74 246
MS.gene66954.t1 AT5G14610 33.638 437 271 10 180 609 128 552 7.27e-72 244
MS.gene66954.t1 AT5G14610 33.638 437 271 10 180 609 128 552 9.62e-72 243
MS.gene66954.t1 AT5G14610 33.638 437 271 10 180 609 136 560 1.19e-71 243
MS.gene66954.t1 AT3G58570 34.053 417 246 7 206 602 141 548 1.21e-71 243
MS.gene66954.t1 AT2G42520 34.293 417 245 7 206 602 154 561 1.55e-71 243
MS.gene66954.t1 AT2G42520 34.293 417 245 7 206 602 154 561 1.55e-71 243
MS.gene66954.t1 AT2G42520 34.293 417 245 7 206 602 154 561 1.55e-71 243
MS.gene66954.t1 AT5G63120 32.080 399 264 6 193 588 146 540 1.68e-71 241
MS.gene66954.t1 AT3G01540 33.176 425 265 9 188 606 134 545 5.00e-71 241
MS.gene66954.t1 AT3G01540 33.176 425 265 9 188 606 134 545 5.16e-71 241
MS.gene66954.t1 AT3G01540 33.176 425 265 9 188 606 134 545 5.16e-71 241
MS.gene66954.t1 AT3G01540 33.176 425 265 9 188 606 134 545 5.16e-71 241
MS.gene66954.t1 AT3G58510 33.090 411 249 6 204 597 144 545 1.98e-70 239
MS.gene66954.t1 AT3G58510 33.090 411 249 6 204 597 144 545 1.98e-70 239
MS.gene66954.t1 AT3G58510 33.090 411 249 6 204 597 144 545 1.98e-70 239
MS.gene66954.t1 AT2G33730 31.765 425 257 7 193 592 294 710 9.24e-66 229
MS.gene66954.t1 AT3G06480 32.673 404 256 7 192 588 415 809 2.28e-63 226
MS.gene66954.t1 AT5G14610 33.162 389 243 8 226 609 45 421 2.33e-63 218
MS.gene66954.t1 AT5G14610 33.162 389 243 8 226 609 45 421 2.33e-63 218
MS.gene66954.t1 AT5G14610 33.162 389 243 8 226 609 244 620 9.03e-62 218
MS.gene66954.t1 AT4G33370 32.333 433 276 10 190 609 75 503 1.24e-61 214
MS.gene66954.t1 AT5G51280 31.773 406 263 7 190 585 124 525 4.61e-61 213
MS.gene66954.t1 AT1G31970 33.738 412 261 8 187 589 89 497 1.39e-59 208
MS.gene66954.t1 AT5G14610 33.422 377 231 10 180 549 136 499 3.48e-56 198
MS.gene66954.t1 AT1G28180 33.333 360 218 7 239 588 1 348 2.88e-55 192
MS.gene66954.t1 AT2G47330 30.446 404 265 7 195 590 211 606 7.73e-55 199
MS.gene66954.t1 AT5G63120 31.471 340 226 6 193 529 146 481 4.12e-54 192
MS.gene66954.t1 AT5G63120 31.532 333 221 6 193 522 146 474 3.28e-53 189
MS.gene66954.t1 AT5G63120 31.532 333 221 6 193 522 146 474 3.28e-53 189
MS.gene66954.t1 AT5G63120 31.532 333 221 6 193 522 146 474 3.28e-53 189
MS.gene66954.t1 AT3G09720 30.542 406 253 9 193 585 118 507 4.70e-53 190
MS.gene66954.t1 AT3G09720 30.542 406 253 9 193 585 118 507 4.70e-53 190
MS.gene66954.t1 AT1G20920 29.657 408 274 7 188 588 167 568 8.17e-53 194
MS.gene66954.t1 AT1G20920 29.657 408 274 7 188 588 505 906 4.33e-52 194
MS.gene66954.t1 AT1G20920 29.657 408 274 7 188 588 505 906 4.33e-52 194
MS.gene66954.t1 AT1G20920 29.657 408 274 7 188 588 505 906 4.33e-52 194
MS.gene66954.t1 AT1G20920 29.657 408 274 7 188 588 505 906 4.33e-52 194
MS.gene66954.t1 AT1G20920 29.657 408 274 7 188 588 505 906 4.33e-52 194
MS.gene66954.t1 AT1G20920 29.657 408 274 7 188 588 505 906 4.33e-52 194
MS.gene66954.t1 AT4G16630 30.728 371 243 7 206 570 162 524 3.82e-51 189
MS.gene66954.t1 AT3G06480 32.378 349 220 7 192 533 415 754 1.92e-50 187
MS.gene66954.t1 AT1G72730 32.143 364 235 5 212 573 42 395 2.19e-49 177
MS.gene66954.t1 AT4G00660 30.130 385 251 6 213 593 133 503 2.26e-49 179
MS.gene66954.t1 AT4G00660 30.130 385 251 6 213 593 133 503 2.26e-49 179
MS.gene66954.t1 AT3G13920 32.603 365 232 7 212 573 30 383 4.00e-49 176
MS.gene66954.t1 AT3G13920 31.856 361 234 5 212 570 40 390 4.17e-49 176
MS.gene66954.t1 AT1G51380 30.252 357 235 7 209 562 20 365 4.97e-49 176
MS.gene66954.t1 AT3G13920 32.873 362 229 7 212 570 44 394 5.52e-49 176
MS.gene66954.t1 AT3G13920 32.603 365 232 7 212 573 40 393 7.93e-49 176
MS.gene66954.t1 AT3G19760 27.297 370 251 6 209 573 33 389 9.33e-48 172
MS.gene66954.t1 AT1G54270 33.333 363 227 8 212 570 40 391 5.92e-47 171
MS.gene66954.t1 AT5G60990 30.854 363 237 6 210 563 8 365 4.64e-46 169
MS.gene66954.t1 AT3G13920 32.055 365 229 8 212 573 40 388 6.62e-46 167
MS.gene66954.t1 AT3G61240 31.476 359 228 6 213 567 126 470 7.16e-46 169
MS.gene66954.t1 AT3G61240 31.476 359 228 6 213 567 126 470 7.16e-46 169
MS.gene66954.t1 AT1G77030 29.178 377 259 4 213 587 30 400 1.95e-45 173
MS.gene66954.t1 AT5G26742 31.367 373 237 8 211 573 102 465 4.02e-45 171
MS.gene66954.t1 AT5G26742 31.367 373 237 8 211 573 102 465 4.05e-45 171
MS.gene66954.t1 AT2G45810 30.919 359 230 6 213 567 156 500 9.15e-45 167
MS.gene66954.t1 AT3G09620 28.571 399 247 7 195 588 379 744 1.35e-44 171
MS.gene66954.t1 AT3G09620 28.571 399 247 7 195 588 380 745 1.52e-44 171
MS.gene66954.t1 AT1G54270 32.782 363 224 10 212 570 40 386 6.61e-44 162
MS.gene66954.t1 AT3G22330 28.261 368 254 8 206 569 99 460 2.07e-43 165
MS.gene66954.t1 AT3G22310 29.396 364 245 9 211 569 116 472 2.21e-42 161
MS.gene66954.t1 AT3G22310 29.396 364 245 9 211 569 116 472 2.63e-42 161
MS.gene66954.t1 AT1G16280 30.939 362 233 8 212 566 59 410 7.07e-42 158
MS.gene66954.t1 AT2G40700 29.291 437 232 13 212 573 31 465 4.10e-41 158
MS.gene66954.t1 AT5G26742 30.623 369 233 8 211 573 21 372 7.51e-41 158
MS.gene66954.t1 AT5G11170 29.157 415 269 11 186 593 28 424 1.30e-38 147
MS.gene66954.t1 AT5G11200 29.157 415 269 11 186 593 28 424 1.30e-38 147
MS.gene66954.t1 AT1G71370 28.291 357 238 9 218 562 23 373 1.29e-37 147
MS.gene66954.t1 AT4G09730 25.065 387 274 6 210 582 111 495 2.83e-36 144
MS.gene66954.t1 AT3G18600 28.650 363 246 8 203 560 83 437 1.80e-34 138
MS.gene66954.t1 AT5G05450 26.975 367 239 10 218 562 23 382 6.69e-34 137
MS.gene66954.t1 AT5G62190 27.298 359 242 6 222 569 107 457 1.76e-33 136
MS.gene66954.t1 AT5G11200 26.696 457 267 13 186 593 28 465 3.23e-33 133
MS.gene66954.t1 AT5G65900 29.412 357 236 8 212 560 155 503 5.55e-33 134
MS.gene66954.t1 AT5G08620 29.477 363 221 14 223 562 92 442 1.13e-32 133
MS.gene66954.t1 AT5G54910 26.598 391 267 12 208 591 68 445 4.65e-31 129
MS.gene66954.t1 AT3G16840 26.157 432 244 13 212 573 191 617 7.74e-31 129
MS.gene66954.t1 AT3G16840 26.157 432 244 13 212 573 192 618 8.25e-31 129
MS.gene66954.t1 AT5G63630 27.520 367 251 11 223 576 66 430 1.44e-30 126
MS.gene66954.t1 AT5G63630 27.520 367 251 11 223 576 260 624 3.00e-30 126
MS.gene66954.t1 AT1G12770 26.196 397 239 11 212 556 111 505 4.90e-30 125
MS.gene66954.t1 AT1G12770 26.196 397 239 11 212 556 111 505 4.90e-30 125
MS.gene66954.t1 AT5G11170 29.191 346 227 10 255 593 7 341 1.89e-29 120
MS.gene66954.t1 AT5G08610 28.686 373 211 14 223 562 394 744 1.54e-28 122
MS.gene66954.t1 AT1G51380 28.395 243 163 5 209 450 20 252 4.84e-28 114
MS.gene66954.t1 AT4G34910 26.615 387 233 11 212 551 47 429 7.84e-27 115
MS.gene66954.t1 AT3G53110 25.935 401 255 13 193 565 68 454 2.18e-26 113
MS.gene66954.t1 AT3G06980 24.603 378 255 9 212 562 375 749 3.33e-26 114
MS.gene66954.t1 AT1G51380 29.108 213 143 4 209 420 20 225 8.93e-26 108
MS.gene66954.t1 AT1G51380 29.108 213 143 4 209 420 20 225 1.14e-25 108
MS.gene66954.t1 AT1G71280 27.302 315 191 9 218 524 24 308 3.96e-25 107
MS.gene66954.t1 AT1G71280 27.358 318 193 9 218 527 24 311 4.86e-25 108
MS.gene66954.t1 AT1G63250 27.688 372 245 10 223 576 340 705 7.63e-25 110
MS.gene66954.t1 AT5G19210 25.138 362 233 9 218 551 83 434 2.11e-23 104
MS.gene66954.t1 AT2G07750 26.121 379 242 12 223 576 387 752 2.38e-23 105
MS.gene66954.t1 AT4G15850 23.326 433 254 11 221 585 41 463 7.10e-21 97.1
MS.gene66954.t1 AT1G28180 36.134 119 71 2 239 354 1 117 1.06e-18 82.8
MS.gene66954.t1 AT5G11200 28.205 234 148 7 186 414 28 246 5.42e-16 81.6
MS.gene66954.t1 AT5G11200 29.208 202 138 4 393 593 286 483 1.92e-14 76.6
MS.gene66954.t1 AT1G10930 26.062 353 228 13 223 561 443 776 1.44e-14 77.8
MS.gene66954.t1 AT1G27880 24.079 353 226 12 230 565 266 593 1.50e-13 74.7
MS.gene66954.t1 AT1G27880 24.079 353 226 12 230 565 266 593 2.12e-13 73.9
MS.gene66954.t1 AT3G05740 25.065 383 241 15 218 580 106 462 5.32e-12 68.9
MS.gene66954.t1 AT3G05740 25.065 383 241 15 218 580 191 547 7.81e-12 68.6

Find 145 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGTGGCTTAAAATGTTTC+TGG 0.147612 6.1:+11790632 None:intergenic
ACCTACCTTTCCTTTGAAAT+TGG 0.168867 6.1:+11794065 None:intergenic
CTAAAATAAACAAGATTAAT+TGG 0.192242 6.1:+11791730 None:intergenic
CTTGCACAACGAGATATTAT+TGG 0.230162 6.1:+11791186 None:intergenic
GGTTGTGGCTACTGGAGTTT+TGG 0.244181 6.1:-11790455 MS.gene66954:CDS
AGAAATAATGCAGTCATTTA+TGG 0.244375 6.1:-11790494 MS.gene66954:CDS
CGACATGCCTAATTCGATTA+AGG 0.248513 6.1:-11790389 MS.gene66954:CDS
ATTGTTTCTCTAGTGAATTT+TGG 0.271716 6.1:-11791842 MS.gene66954:intron
TTCCCGGTGGTTGTGGCTAC+TGG 0.281226 6.1:-11790463 MS.gene66954:CDS
GACCAGAGAGATGCTCTTCC+TGG 0.301895 6.1:-11791675 MS.gene66954:CDS
TGATGATGATGTTTGTAGTT+TGG 0.317671 6.1:-11791598 MS.gene66954:CDS
CTGCATTATTTCTCTCCTTT+CGG 0.320408 6.1:+11790504 None:intergenic
CCGTGAAACAGCTAGCAATT+TGG 0.321173 6.1:-11790702 MS.gene66954:CDS
ACGGCCTTGTTTGGTCTGTT+AGG 0.325864 6.1:+11790721 None:intergenic
AGCAATCCCCGCTGCTTTGA+TGG 0.339953 6.1:-11791268 MS.gene66954:CDS
CGTGAAACAGCTAGCAATTT+GGG 0.341262 6.1:-11790701 MS.gene66954:CDS
AAGGAATATGTACATCAAAT+AGG 0.341270 6.1:-11790370 MS.gene66954:CDS
TCCAGCACTGGATGAGGATT+TGG 0.344408 6.1:+11791545 None:intergenic
GGGGAAGAACATGCTTGTTT+TGG 0.352453 6.1:-11791247 MS.gene66954:CDS
ATGTTCTGCAGGAGTTTGTC+AGG 0.352782 6.1:+11791333 None:intergenic
AGCTGTTTCACGGCCTTGTT+TGG 0.357465 6.1:+11790712 None:intergenic
GGTAGAGGGGTTGATCTATT+AGG 0.360776 6.1:-11790433 MS.gene66954:CDS
ACATATTCCTTAATCGAATT+AGG 0.361620 6.1:+11790382 None:intergenic
TCATGTGAAGGGTGTTGTTT+CGG 0.371484 6.1:-11791388 MS.gene66954:CDS
AGAGAAGATGGCAAACTCTA+TGG 0.375037 6.1:-11790776 MS.gene66954:CDS
TCATCGTTTGATGTATGTTT+CGG 0.378578 6.1:-11791163 MS.gene66954:CDS
GTCCGATTCTTTAGAGAAGA+TGG 0.393381 6.1:-11790788 MS.gene66954:CDS
CGATGTCAAGGTGAGTTCTA+AGG 0.394116 6.1:-11791697 MS.gene66954:CDS
ATTTATGGTCGGCGAGTTCC+CGG 0.396686 6.1:-11790479 MS.gene66954:CDS
CACGCGAAATTGCTCGGAAA+AGG 0.410354 6.1:-11791075 MS.gene66954:CDS
GGGATTGCTTGCATTTGAAC+AGG 0.411047 6.1:+11791282 None:intergenic
AAATCAGGAACGCCGTCTTT+AGG 0.411740 6.1:-11791456 MS.gene66954:CDS
TTGAAATTCAAATTTGAAAG+AGG 0.412029 6.1:+11794091 None:intergenic
CGGGTGCCGCCGCTGTACCT+CGG 0.418581 6.1:-11790252 MS.gene66954:CDS
TTTAGGAGGTGATCAGGTTC+AGG 0.420816 6.1:-11791439 MS.gene66954:CDS
CGGCGAGTTCCCGGTGGTTG+TGG 0.434782 6.1:-11790470 MS.gene66954:CDS
TATACGTCGGCTCGAGACTC+GGG 0.438739 6.1:-11790603 MS.gene66954:CDS
AATAGGAAGGGCATCTAGAA+TGG 0.439220 6.1:-11790353 MS.gene66954:CDS
TGCCATCTTCTCTAAAGAAT+CGG 0.441703 6.1:+11790786 None:intergenic
GTTAAAGCTGTTTCAATTCA+CGG 0.442461 6.1:-11790541 MS.gene66954:CDS
CCCCAGGAAGAGCATCTCTC+TGG 0.445942 6.1:+11791673 None:intergenic
AACGCAATTACAGTTTCAAC+AGG 0.446108 6.1:-11790565 MS.gene66954:CDS
AGAACGACGACGACGGTTGT+GGG 0.446411 6.1:-11794809 MS.gene66954:CDS
TAGAACGACGACGACGGTTG+TGG 0.447449 6.1:-11794810 MS.gene66954:CDS
GCAATCCCCGCTGCTTTGAT+GGG 0.456850 6.1:-11791267 MS.gene66954:CDS
GAGACTCGGGGCAGATCTCT+TGG 0.456902 6.1:-11790590 MS.gene66954:CDS
CAGCTGCTTCTATGTTCTGC+AGG 0.459617 6.1:+11791322 None:intergenic
GCCGTCTTTAGGAGGTGATC+AGG 0.459928 6.1:-11791445 MS.gene66954:CDS
AGAGATACTGACAACAAATC+AGG 0.465586 6.1:-11791471 MS.gene66954:CDS
CACGGCTTTGTCACAACCTC+AGG 0.465662 6.1:-11790833 MS.gene66954:CDS
ACCAGAGAGATGCTCTTCCT+GGG 0.473413 6.1:-11791674 MS.gene66954:CDS
AAGTGGACTGCATGCTTCAA+AGG 0.474942 6.1:-11790885 MS.gene66954:CDS
TTCTTCCCCATCAAAGCAGC+GGG 0.475720 6.1:+11791261 None:intergenic
TAGTTTGGAATGTAAACAAT+CGG 0.486405 6.1:-11791583 MS.gene66954:CDS
CATGAAGCAAACGACATAAC+CGG 0.487625 6.1:+11791363 None:intergenic
ACAAGGAGTTGAATTGATTG+TGG 0.487874 6.1:-11790986 MS.gene66954:CDS
CAAGGAGTTGAATTGATTGT+GGG 0.488532 6.1:-11790985 MS.gene66954:CDS
GGGTGCCGCCGCTGTACCTC+GGG 0.488624 6.1:-11790251 MS.gene66954:CDS
ACAATACACTGGGGCTCCCC+AGG 0.494415 6.1:+11791657 None:intergenic
CCAAATTGCTAGCTGTTTCA+CGG 0.499554 6.1:+11790702 None:intergenic
TACGAGAGAGCTCAGTATAC+AGG 0.499894 6.1:-11791106 MS.gene66954:CDS
TTTAAAACTGCACTTGTGGT+TGG 0.501585 6.1:-11791045 MS.gene66954:CDS
AGTGGACTGCATGCTTCAAA+GGG 0.503807 6.1:-11790884 MS.gene66954:CDS
TAAATGCACTCGTCGGCTGC+AGG 0.504410 6.1:+11791498 None:intergenic
ACTCCAGTAGCCACAACCAC+CGG 0.504693 6.1:+11790460 None:intergenic
GAGCCGACGTATATTACAAC+AGG 0.508711 6.1:+11790613 None:intergenic
GAAGAGCACGCGAAATTGCT+CGG 0.511225 6.1:-11791081 MS.gene66954:CDS
ATTTCAAATTCCAATTTCAA+AGG 0.512874 6.1:-11794075 MS.gene66954:CDS
TCAGGTATTGCAGATATTCA+CGG 0.515977 6.1:-11790851 MS.gene66954:CDS
ATATACGTCGGCTCGAGACT+CGG 0.519620 6.1:-11790604 MS.gene66954:CDS
AAAAGATCAACAAGCCGTCC+TGG 0.520031 6.1:+11790958 None:intergenic
CAACACATCGCAACCAATCA+TGG 0.521485 6.1:+11791817 None:intergenic
TAAAGAATCGGACGTTGTTG+CGG 0.524657 6.1:+11790798 None:intergenic
GAATTGATTGTGGGAACACC+AGG 0.524874 6.1:-11790976 MS.gene66954:CDS
ATAGGAAGGGCATCTAGAAT+GGG 0.525349 6.1:-11790352 MS.gene66954:CDS
GTTAGTCGATGTATTAAAGT+CGG 0.529271 6.1:-11790272 MS.gene66954:CDS
AAAACTGCACTTGTGGTTGG+TGG 0.533633 6.1:-11791042 MS.gene66954:CDS
AGACTTTCCTGAACCTGTAT+CGG 0.533821 6.1:+11791224 None:intergenic
GAAGGGTGTTGTTTCGGCAC+CGG 0.534256 6.1:-11791382 MS.gene66954:CDS
CACATATATATTCACCGTAT+CGG 0.534333 6.1:+11791628 None:intergenic
AATATGTACATCAAATAGGA+AGG 0.538019 6.1:-11790366 MS.gene66954:CDS
TCCAAATCCTCATCCAGTGC+TGG 0.543059 6.1:-11791546 MS.gene66954:CDS
AAATTCCAATTTCAAAGGAA+AGG 0.548011 6.1:-11794070 MS.gene66954:intron
TGTGGTTGGTGGTGATGCCA+TGG 0.551178 6.1:-11791031 MS.gene66954:CDS
TTAGTCGATGTATTAAAGTC+GGG 0.558344 6.1:-11790271 MS.gene66954:CDS
GAAACTCGACATTCATGTGA+AGG 0.558611 6.1:-11791400 MS.gene66954:CDS
TGTCACCAGTGTGAGAGTTG+TGG 0.563267 6.1:+11794861 None:intergenic
ATTCAAATTTGAAAGAGGCA+TGG 0.563280 6.1:+11794096 None:intergenic
AAGGGCATCTAGAATGGGAG+AGG 0.566272 6.1:-11790347 MS.gene66954:CDS
CTGCAGAACATAGAAGCAGC+TGG 0.566645 6.1:-11791321 MS.gene66954:CDS
CTCCAGTAGCCACAACCACC+GGG 0.567240 6.1:+11790461 None:intergenic
GCTTGCATTTGAACAGGCGT+AGG 0.569429 6.1:+11791288 None:intergenic
GATACAGTGGTTATAACCGT+TGG 0.572374 6.1:-11790748 MS.gene66954:CDS
TGTATTGTATGTGGCCGATA+CGG 0.574833 6.1:-11791642 MS.gene66954:CDS
AAGACATCCAGCACTGGATG+AGG 0.577695 6.1:+11791539 None:intergenic
TGTTCTGCAGGAGTTTGTCA+GGG 0.581419 6.1:+11791334 None:intergenic
GTCGTTATTGCGGAAAATTG+TGG 0.581925 6.1:-11791790 MS.gene66954:CDS
TCAGGAACGCCGTCTTTAGG+AGG 0.581955 6.1:-11791453 MS.gene66954:CDS
TGAACCTAACAGACCAAACA+AGG 0.584747 6.1:-11790725 MS.gene66954:CDS
GCATCTAGAATGGGAGAGGA+AGG 0.588001 6.1:-11790343 MS.gene66954:CDS
ATCGGCCACATACAATACAC+TGG 0.590795 6.1:+11791646 None:intergenic
CAACTTTACCGCATTCAACA+AGG 0.593925 6.1:-11791003 MS.gene66954:CDS
GCGGTAAAGTTGTCTAGCCA+TGG 0.598297 6.1:+11791014 None:intergenic
TGGTGGAAGACATCCAGCAC+TGG 0.602023 6.1:+11791533 None:intergenic
AGATGCAGGGAACGATGTCA+AGG 0.602458 6.1:-11791709 MS.gene66954:CDS
TGGTCTGTTAGGTTCACCAA+CGG 0.604355 6.1:+11790732 None:intergenic
ATTCAACTCCTTGTTGAATG+CGG 0.607306 6.1:+11790995 None:intergenic
TCGGCCACATACAATACACT+GGG 0.609672 6.1:+11791647 None:intergenic
GAGCCCCAGTGTATTGTATG+TGG 0.610734 6.1:-11791651 MS.gene66954:CDS
CTCTATGGCAAAAGATACAG+TGG 0.614077 6.1:-11790761 MS.gene66954:CDS
GCTGTTTAAAACTGCACTTG+TGG 0.617927 6.1:-11791049 MS.gene66954:CDS
CGACGACGACGGTTGTGGGA+AGG 0.621502 6.1:-11794805 MS.gene66954:intron
AAACTCGACATTCATGTGAA+GGG 0.624831 6.1:-11791399 MS.gene66954:CDS
TCCATCCACAACTCTCACAC+TGG 0.627400 6.1:-11794866 MS.gene66954:CDS
GCGAGAAATCTATGACCGAA+AGG 0.633150 6.1:-11790519 MS.gene66954:CDS
ACCTGATCACCTCCTAAAGA+CGG 0.633787 6.1:+11791444 None:intergenic
CAATCCCCGCTGCTTTGATG+GGG 0.635262 6.1:-11791266 MS.gene66954:CDS
TCCTCCAGAGAAAACCCTTG+TGG 0.636938 6.1:+11790207 None:intergenic
GTGTTGCATTGTCGTTATTG+CGG 0.636988 6.1:-11791800 MS.gene66954:CDS
GTGATATAGAACGACGACGA+CGG 0.640685 6.1:-11794816 MS.gene66954:CDS
GATAAGCTCCCGAGGTACAG+CGG 0.640895 6.1:+11790243 None:intergenic
ATATGTACATCAAATAGGAA+GGG 0.645395 6.1:-11790365 MS.gene66954:CDS
GCGGAATACATTAAGACCTG+AGG 0.646184 6.1:+11790817 None:intergenic
ATACGTCGGCTCGAGACTCG+GGG 0.647161 6.1:-11790602 MS.gene66954:CDS
TGTATACTGAGCTCTCTCGT+AGG 0.649466 6.1:+11791108 None:intergenic
ACCAGTGTGAGAGTTGTGGA+TGG 0.650053 6.1:+11794865 None:intergenic
CCGACGTATATTACAACAGG+TGG 0.652630 6.1:+11790616 None:intergenic
CCAGAGAGATGCTCTTCCTG+GGG 0.652795 6.1:-11791673 MS.gene66954:CDS
ATAATGCAGTCATTTATGGT+CGG 0.657786 6.1:-11790490 MS.gene66954:CDS
GTTCTTCCCCATCAAAGCAG+CGG 0.661215 6.1:+11791260 None:intergenic
TCTGCAGGAGTTTGTCAGGG+AGG 0.664045 6.1:+11791337 None:intergenic
GGTGTTAACACCATAGCTAG+AGG 0.666575 6.1:+11791129 None:intergenic
TGATTGTGGGAACACCAGGA+CGG 0.673152 6.1:-11790972 MS.gene66954:CDS
ACAACAGTGCAGCGACGAGG+TGG 0.675208 6.1:-11794841 MS.gene66954:CDS
CAATTCACAGTATACCACAA+GGG 0.675999 6.1:-11790221 MS.gene66954:CDS
CCACCTGTTGTAATATACGT+CGG 0.679670 6.1:-11790616 MS.gene66954:CDS
TCAATTCACAGTATACCACA+AGG 0.680822 6.1:-11790222 MS.gene66954:CDS
TCTAACATAAATGCACTCGT+CGG 0.680838 6.1:+11791491 None:intergenic
GTGACAACAGTGCAGCGACG+AGG 0.681788 6.1:-11794844 MS.gene66954:CDS
TGTGAATTGATAAGCTCCCG+AGG 0.687454 6.1:+11790235 None:intergenic
TATGGTCGGCGAGTTCCCGG+TGG 0.702170 6.1:-11790476 MS.gene66954:CDS
GTGGACTGCATGCTTCAAAG+GGG 0.709095 6.1:-11790883 MS.gene66954:CDS
AAGCTCCCGAGGTACAGCGG+CGG 0.720985 6.1:+11790246 None:intergenic
TCTTCCCCATCAAAGCAGCG+GGG 0.769950 6.1:+11791262 None:intergenic
CGGCCACATACAATACACTG+GGG 0.805673 6.1:+11791648 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTGTATAGATTGAATTT+AGG + chr6.1:11790779-11790798 None:intergenic 15.0%
!! ACAAAAAGTTAACATAAATA+TGG - chr6.1:11790672-11790691 MS.gene66954:CDS 15.0%
!! CTAAAATAAACAAGATTAAT+TGG + chr6.1:11793336-11793355 None:intergenic 15.0%
!! TGTGAATAATTAAATTAATG+TGG + chr6.1:11791592-11791611 None:intergenic 15.0%
!! TTAAATTGTGTTAATTGAAA+TGG - chr6.1:11791264-11791283 MS.gene66954:CDS 15.0%
!!! CAATTTCATTTTTTTTTTCT+GGG - chr6.1:11792035-11792054 MS.gene66954:intron 15.0%
!!! TCAATTTCATTTTTTTTTTC+TGG - chr6.1:11792034-11792053 MS.gene66954:intron 15.0%
!!! TTTTAGTCATTCTAAAAATT+AGG + chr6.1:11790716-11790735 None:intergenic 15.0%
!! AGAAATTACAAAACAACTTA+TGG + chr6.1:11792225-11792244 None:intergenic 20.0%
!! ATAAGTTGTTTATTCAAACA+TGG + chr6.1:11792282-11792301 None:intergenic 20.0%
!! ATTTCAAATTCCAATTTCAA+AGG - chr6.1:11790988-11791007 MS.gene66954:CDS 20.0%
!! TACATATGAGTTTACTTTAA+AGG - chr6.1:11790586-11790605 MS.gene66954:CDS 20.0%
!! TATAATTCAGTGTTAACAAA+TGG - chr6.1:11792112-11792131 MS.gene66954:intron 20.0%
!! TATTATTACATATGTCCTTA+TGG + chr6.1:11791568-11791587 None:intergenic 20.0%
!! TTGAAATTCAAATTTGAAAG+AGG + chr6.1:11790975-11790994 None:intergenic 20.0%
!!! ATAATTGATTTTGACATGTT+TGG - chr6.1:11792413-11792432 MS.gene66954:intron 20.0%
!!! ATGTTATTTTTACATCCATA+AGG - chr6.1:11791550-11791569 MS.gene66954:CDS 20.0%
!!! ATTTTTAGAGCCATTTTTTT+AGG + chr6.1:11790864-11790883 None:intergenic 20.0%
!!! GTAAAGTTTTTAGCTTTTTA+TGG - chr6.1:11791684-11791703 MS.gene66954:CDS 20.0%
!!! TGTTTTCATATAAGATATCA+TGG + chr6.1:11793023-11793042 None:intergenic 20.0%
!!! TTATTTTAGAGAACTTATGA+TGG - chr6.1:11792176-11792195 MS.gene66954:intron 20.0%
! AAATTCCAATTTCAAAGGAA+AGG - chr6.1:11790993-11791012 MS.gene66954:CDS 25.0%
! AAGGAATATGTACATCAAAT+AGG - chr6.1:11794693-11794712 MS.gene66954:intron 25.0%
! AATATGTACATCAAATAGGA+AGG - chr6.1:11794697-11794716 MS.gene66954:intron 25.0%
! AATGTCTTTGAACTAATAGA+AGG - chr6.1:11791480-11791499 MS.gene66954:CDS 25.0%
! AATTCCAAAAGTAGACAATT+TGG + chr6.1:11792249-11792268 None:intergenic 25.0%
! ACATATTCCTTAATCGAATT+AGG + chr6.1:11794684-11794703 None:intergenic 25.0%
! AGAAATAATGCAGTCATTTA+TGG - chr6.1:11794569-11794588 MS.gene66954:intron 25.0%
! ATATGTACATCAAATAGGAA+GGG - chr6.1:11794698-11794717 MS.gene66954:intron 25.0%
! ATTCCAAAAGTAGACAATTT+GGG + chr6.1:11792248-11792267 None:intergenic 25.0%
! ATTTAATCTAACCAACCAAT+TGG + chr6.1:11791250-11791269 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG + chr6.1:11790473-11790492 None:intergenic 25.0%
! GGATGTAAAATTGATTATAG+AGG - chr6.1:11792387-11792406 MS.gene66954:intron 25.0%
! TAACCCTAATCCTAAAAAAA+TGG - chr6.1:11790851-11790870 MS.gene66954:CDS 25.0%
! TCAAATATGACAATCCAAAT+GGG + chr6.1:11792897-11792916 None:intergenic 25.0%
! TGAAGAATAGATTTCAATAC+AGG + chr6.1:11792010-11792029 None:intergenic 25.0%
! TTTGCTAGGATTAGATATAA+AGG + chr6.1:11790812-11790831 None:intergenic 25.0%
!! AATTGATTCTAGTTGAAGTT+AGG - chr6.1:11792468-11792487 MS.gene66954:intron 25.0%
!! CATCTTTTCATCTTCATTTT+TGG + chr6.1:11790617-11790636 None:intergenic 25.0%
!! TAGTTTGGAATGTAAACAAT+CGG - chr6.1:11793480-11793499 MS.gene66954:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+TGG - chr6.1:11793112-11793131 MS.gene66954:intron 25.0%
!!! AAAACCCTTTTTGGAATTTT+AGG - chr6.1:11792756-11792775 MS.gene66954:intron 25.0%
!!! AAACCCTTTTTGGAATTTTA+GGG - chr6.1:11792757-11792776 MS.gene66954:intron 25.0%
!!! AATTCACTTTTAGATGGAAT+CGG - chr6.1:11792543-11792562 MS.gene66954:intron 25.0%
!!! AATTTTACTTTTGCAGGTTT+TGG - chr6.1:11791396-11791415 MS.gene66954:CDS 25.0%
!!! ATCTTGTTTATTTTAGATGC+AGG - chr6.1:11793340-11793359 MS.gene66954:intron 25.0%
!!! ATTGTTTCTCTAGTGAATTT+TGG - chr6.1:11793221-11793240 MS.gene66954:intron 25.0%
!!! ATTTTACTTTTGCAGGTTTT+GGG - chr6.1:11791397-11791416 MS.gene66954:CDS 25.0%
!!! ATTTTTGAAAACAACCCATT+TGG - chr6.1:11792880-11792899 MS.gene66954:intron 25.0%
!!! ATTTTTTTAGGATTAGGGTT+AGG + chr6.1:11790852-11790871 None:intergenic 25.0%
!!! CAATTGCTGTTTTCAAATTT+TGG - chr6.1:11792079-11792098 MS.gene66954:intron 25.0%
!!! CATAAGTTTTGTGAAAGTAT+TGG + chr6.1:11792725-11792744 None:intergenic 25.0%
!!! CGATCTAGTTGTTTTTTAAT+TGG - chr6.1:11791729-11791748 MS.gene66954:CDS 25.0%
!!! GTCTACTTTTGGAATTATAA+GGG - chr6.1:11792253-11792272 MS.gene66954:intron 25.0%
!!! TCTTGTTTATTTTAGATGCA+GGG - chr6.1:11793341-11793360 MS.gene66954:intron 25.0%
!!! TGTCTACTTTTGGAATTATA+AGG - chr6.1:11792252-11792271 MS.gene66954:intron 25.0%
!!! TTGTTCAATTCACTTTTAGA+TGG - chr6.1:11792537-11792556 MS.gene66954:intron 25.0%
AAAGCGATTGAAACTTTGAT+GGG + chr6.1:11791948-11791967 None:intergenic 30.0%
AACATTACCATTAGGTGAAT+CGG + chr6.1:11791974-11791993 None:intergenic 30.0%
AGAGAAGAGAGTTTCATAAA+AGG + chr6.1:11791071-11791090 None:intergenic 30.0%
ATAATGCAGTCATTTATGGT+CGG - chr6.1:11794573-11794592 MS.gene66954:intron 30.0%
ATTCAAATTTGAAAGAGGCA+TGG + chr6.1:11790970-11790989 None:intergenic 30.0%
CACATATATATTCACCGTAT+CGG + chr6.1:11793438-11793457 None:intergenic 30.0%
CATAATATATACAAGGTCCA+GGG + chr6.1:11790466-11790485 None:intergenic 30.0%
CTACAAATACCTTATCAACA+TGG + chr6.1:11792982-11793001 None:intergenic 30.0%
CTCAAATATGACAATCCAAA+TGG + chr6.1:11792898-11792917 None:intergenic 30.0%
CTCATCGTTTACAAAAACTA+AGG + chr6.1:11794751-11794770 None:intergenic 30.0%
CTTAGCAAACTCATGAAAAT+TGG - chr6.1:11792651-11792670 MS.gene66954:intron 30.0%
GAATTAGGAACATTACCATT+AGG + chr6.1:11791982-11792001 None:intergenic 30.0%
GTTAGTCGATGTATTAAAGT+CGG - chr6.1:11794791-11794810 MS.gene66954:intron 30.0%
TAGCCCTAAAATTCCAAAAA+GGG + chr6.1:11792763-11792782 None:intergenic 30.0%
TCAACTAGAATCAATTCTTG+CGG + chr6.1:11792464-11792483 None:intergenic 30.0%
TCATCGTTTGATGTATGTTT+CGG - chr6.1:11793900-11793919 MS.gene66954:intron 30.0%
TGAGCTTAATTCAGTTAGTA+AGG + chr6.1:11790495-11790514 None:intergenic 30.0%
TTAGTCGATGTATTAAAGTC+GGG - chr6.1:11794792-11794811 MS.gene66954:intron 30.0%
TTTCCAAAGTTTGCATATGA+AGG + chr6.1:11791778-11791797 None:intergenic 30.0%
TTTCTTTATTCTGTTCTTCC+TGG - chr6.1:11791349-11791368 MS.gene66954:CDS 30.0%
TTTGAACTAATAGAAGGTGA+TGG - chr6.1:11791486-11791505 MS.gene66954:CDS 30.0%
! AAAGAGATAATGTGATGATG+AGG - chr6.1:11790362-11790381 MS.gene66954:CDS 30.0%
! AATTTTACATCCTCCAAAAG+TGG + chr6.1:11792379-11792398 None:intergenic 30.0%
! AGTAATGAGAAAACCCTTTT+TGG - chr6.1:11792747-11792766 MS.gene66954:intron 30.0%
! GTTAAAGCTGTTTCAATTCA+CGG - chr6.1:11794522-11794541 MS.gene66954:intron 30.0%
! TGATGATGATGTTTGTAGTT+TGG - chr6.1:11793465-11793484 MS.gene66954:intron 30.0%
! TGTATGTTTGATTCCACTTT+TGG - chr6.1:11792363-11792382 MS.gene66954:intron 30.0%
!!! AGAGCCATTTTTTTAGGATT+AGG + chr6.1:11790858-11790877 None:intergenic 30.0%
!!! GAGCCATTTTTTTAGGATTA+GGG + chr6.1:11790857-11790876 None:intergenic 30.0%
AAACTCGACATTCATGTGAA+GGG - chr6.1:11793664-11793683 MS.gene66954:intron 35.0%
AACATAAATTCTGAGTGGGA+AGG + chr6.1:11790919-11790938 None:intergenic 35.0%
AACGCAATTACAGTTTCAAC+AGG - chr6.1:11794498-11794517 MS.gene66954:intron 35.0%
AAGAGAAAAGAGAGAATACG+AGG - chr6.1:11790336-11790355 MS.gene66954:CDS 35.0%
ACAAGGAGTTGAATTGATTG+TGG - chr6.1:11794077-11794096 MS.gene66954:CDS 35.0%
AGAAAGATTGATCACTCTAC+TGG + chr6.1:11793180-11793199 None:intergenic 35.0%
AGACCAACATAAATTCTGAG+TGG + chr6.1:11790924-11790943 None:intergenic 35.0%
AGAGATACTGACAACAAATC+AGG - chr6.1:11793592-11793611 MS.gene66954:intron 35.0%
AGATTTCTTGAACGTTGAAG+CGG - chr6.1:11791293-11791312 MS.gene66954:CDS 35.0%
ATAAAGAAAATTGCCACGGT+CGG - chr6.1:11791177-11791196 MS.gene66954:CDS 35.0%
ATCTAACCAACCAATTGGTT+TGG + chr6.1:11791245-11791264 None:intergenic 35.0%
ATTCAACTCCTTGTTGAATG+CGG + chr6.1:11794071-11794090 None:intergenic 35.0%
ATTTCCCAAAACCCTAAACA+TGG - chr6.1:11791903-11791922 MS.gene66954:intron 35.0%
CAAGGAGTTGAATTGATTGT+GGG - chr6.1:11794078-11794097 MS.gene66954:CDS 35.0%
CAATTCACAGTATACCACAA+GGG - chr6.1:11794842-11794861 MS.gene66954:CDS 35.0%
CCTGCAAAAGTAAAATTCAG+TGG + chr6.1:11791393-11791412 None:intergenic 35.0%
CTAGCCCTAAAATTCCAAAA+AGG + chr6.1:11792764-11792783 None:intergenic 35.0%
CTTGCACAACGAGATATTAT+TGG + chr6.1:11793880-11793899 None:intergenic 35.0%
GAAAGCGATTGAAACTTTGA+TGG + chr6.1:11791949-11791968 None:intergenic 35.0%
GAACCTTCATATGCAAACTT+TGG - chr6.1:11791772-11791791 MS.gene66954:CDS 35.0%
GAATCAAATACGATTCGAAG+AGG + chr6.1:11791845-11791864 None:intergenic 35.0%
GACCAACATAAATTCTGAGT+GGG + chr6.1:11790923-11790942 None:intergenic 35.0%
GCATAATATATACAAGGTCC+AGG + chr6.1:11790467-11790486 None:intergenic 35.0%
GCCAATAAAGAAAATTGCCA+CGG - chr6.1:11791173-11791192 MS.gene66954:CDS 35.0%
GGAATCATCAACCATGTTTA+GGG + chr6.1:11791917-11791936 None:intergenic 35.0%
TAACAAAAAGCCTCTAGCTA+TGG - chr6.1:11793924-11793943 MS.gene66954:intron 35.0%
TCAAAGGAAAGGTAGGTATA+TGG - chr6.1:11791004-11791023 MS.gene66954:CDS 35.0%
TCAATACAGGAAGACGAATT+AGG + chr6.1:11791997-11792016 None:intergenic 35.0%
TCAATTCACAGTATACCACA+AGG - chr6.1:11794841-11794860 MS.gene66954:CDS 35.0%
TCCAATTTCAAAGGAAAGGT+AGG - chr6.1:11790997-11791016 MS.gene66954:CDS 35.0%
TCTAACATAAATGCACTCGT+CGG + chr6.1:11793575-11793594 None:intergenic 35.0%
TGCTACATGAGGTGTATATT+GGG - chr6.1:11790408-11790427 MS.gene66954:CDS 35.0%
TGGAATCATCAACCATGTTT+AGG + chr6.1:11791918-11791937 None:intergenic 35.0%
TTCCCACTCAGAATTTATGT+TGG - chr6.1:11790918-11790937 MS.gene66954:CDS 35.0%
TTCGAAAACAAAATAACGCG+TGG + chr6.1:11791042-11791061 None:intergenic 35.0%
! ACCGTGGCAATTTTCTTTAT+TGG + chr6.1:11791177-11791196 None:intergenic 35.0%
! CTAATAGAAGGTGATGGTAA+TGG - chr6.1:11791492-11791511 MS.gene66954:CDS 35.0%
! CTGCATTATTTCTCTCCTTT+CGG + chr6.1:11794562-11794581 None:intergenic 35.0%
! GGCAATTTTCTTTATTGGCA+TGG + chr6.1:11791172-11791191 None:intergenic 35.0%
! TCAGGTATTGCAGATATTCA+CGG - chr6.1:11794212-11794231 MS.gene66954:intron 35.0%
! TCTCCCAAATTGTCTACTTT+TGG - chr6.1:11792242-11792261 MS.gene66954:intron 35.0%
! TGCCATCTTCTCTAAAGAAT+CGG + chr6.1:11794280-11794299 None:intergenic 35.0%
! TTTAAAACTGCACTTGTGGT+TGG - chr6.1:11794018-11794037 MS.gene66954:intron 35.0%
!! ACCTACCTTTCCTTTGAAAT+TGG + chr6.1:11791001-11791020 None:intergenic 35.0%
!! ATCAACCATGTTTAGGGTTT+TGG + chr6.1:11791911-11791930 None:intergenic 35.0%
!! ATGTTTGATTCCACTTTTGG+AGG - chr6.1:11792366-11792385 MS.gene66954:intron 35.0%
!! CCACTGAATTTTACTTTTGC+AGG - chr6.1:11791390-11791409 MS.gene66954:CDS 35.0%
!! TCAACCATGTTTAGGGTTTT+GGG + chr6.1:11791910-11791929 None:intergenic 35.0%
!!! ATGTTTAGGGTTTTGGGAAA+TGG + chr6.1:11791904-11791923 None:intergenic 35.0%
AGACTTTCCTGAACCTGTAT+CGG + chr6.1:11793842-11793861 None:intergenic 40.0%
AGAGAAGATGGCAAACTCTA+TGG - chr6.1:11794287-11794306 MS.gene66954:intron 40.0%
AGGATTAGGGTTAGGCAATT+AGG + chr6.1:11790844-11790863 None:intergenic 40.0%
AGGTGTAATGAAGTGAAGCT+GGG + chr6.1:11791095-11791114 None:intergenic 40.0%
ATACACCTCATGTAGCACTA+GGG + chr6.1:11790405-11790424 None:intergenic 40.0%
CAACTTTACCGCATTCAACA+AGG - chr6.1:11794060-11794079 MS.gene66954:intron 40.0%
CACAACACAACACAAAAACC+AGG + chr6.1:11791370-11791389 None:intergenic 40.0%
CAGGTGGCTTAAAATGTTTC+TGG + chr6.1:11794434-11794453 None:intergenic 40.0%
CATGAAGCAAACGACATAAC+CGG + chr6.1:11793703-11793722 None:intergenic 40.0%
CCAAACATGGTTGTTACTGT+TGG - chr6.1:11793125-11793144 MS.gene66954:intron 40.0%
CCAACAGTAACAACCATGTT+TGG + chr6.1:11793128-11793147 None:intergenic 40.0%
CCACCTGTTGTAATATACGT+CGG - chr6.1:11794447-11794466 MS.gene66954:intron 40.0%
CGACATGCCTAATTCGATTA+AGG - chr6.1:11794674-11794693 MS.gene66954:intron 40.0%
CGTGAAACAGCTAGCAATTT+GGG - chr6.1:11794362-11794381 MS.gene66954:intron 40.0%
CTACATGAGGTGTATATTGG+GGG - chr6.1:11790410-11790429 MS.gene66954:CDS 40.0%
CTCTATGGCAAAAGATACAG+TGG - chr6.1:11794302-11794321 MS.gene66954:intron 40.0%
GAAACTCGACATTCATGTGA+AGG - chr6.1:11793663-11793682 MS.gene66954:intron 40.0%
GAGTATGGTATGATGTCCAT+TGG - chr6.1:11791514-11791533 MS.gene66954:CDS 40.0%
GATACAGTGGTTATAACCGT+TGG - chr6.1:11794315-11794334 MS.gene66954:intron 40.0%
GCTACATGAGGTGTATATTG+GGG - chr6.1:11790409-11790428 MS.gene66954:CDS 40.0%
GGATTAGGGTTAGGCAATTA+GGG + chr6.1:11790843-11790862 None:intergenic 40.0%
GTCGTTATTGCGGAAAATTG+TGG - chr6.1:11793273-11793292 MS.gene66954:intron 40.0%
GTGCTACATGAGGTGTATAT+TGG - chr6.1:11790407-11790426 MS.gene66954:CDS 40.0%
GTGTTGCATTGTCGTTATTG+CGG - chr6.1:11793263-11793282 MS.gene66954:intron 40.0%
TAAAGAATCGGACGTTGTTG+CGG + chr6.1:11794268-11794287 None:intergenic 40.0%
TAAGCACTTGTGAGGCTATT+GGG - chr6.1:11792932-11792951 MS.gene66954:intron 40.0%
TAGCTTACGCCATGTTGATA+AGG - chr6.1:11792970-11792989 MS.gene66954:intron 40.0%
TAGGTGTAATGAAGTGAAGC+TGG + chr6.1:11791096-11791115 None:intergenic 40.0%
TATACACCTCATGTAGCACT+AGG + chr6.1:11790406-11790425 None:intergenic 40.0%
TATGGTATGATGTCCATTGG+TGG - chr6.1:11791517-11791536 MS.gene66954:CDS 40.0%
TATTAGCGTAAGCACTTGTG+AGG - chr6.1:11792924-11792943 MS.gene66954:intron 40.0%
TGAACCTAACAGACCAAACA+AGG - chr6.1:11794338-11794357 MS.gene66954:intron 40.0%
TGTATTGTATGTGGCCGATA+CGG - chr6.1:11793421-11793440 MS.gene66954:intron 40.0%
TTAGGGTTTGCATGTTTGCT+AGG + chr6.1:11790826-11790845 None:intergenic 40.0%
TTGGGAGAAGCAGAGAAAAA+AGG - chr6.1:11791415-11791434 MS.gene66954:CDS 40.0%
! AAACTTTGATGGGTCATCGT+TGG + chr6.1:11791938-11791957 None:intergenic 40.0%
! ATTGGGGGTATGGATGAAAA+AGG - chr6.1:11790425-11790444 MS.gene66954:CDS 40.0%
! CCAAATTGCTAGCTGTTTCA+CGG + chr6.1:11794364-11794383 None:intergenic 40.0%
! CTTTCAACCGATTCACCTAA+TGG - chr6.1:11791964-11791983 MS.gene66954:intron 40.0%
! GCTGTTTAAAACTGCACTTG+TGG - chr6.1:11794014-11794033 MS.gene66954:intron 40.0%
! GTCCGATTCTTTAGAGAAGA+TGG - chr6.1:11794275-11794294 MS.gene66954:intron 40.0%
! TATACCACAAGGGTTTTCTC+TGG - chr6.1:11794852-11794871 MS.gene66954:CDS 40.0%
!! AAGGTGATGGTAATGGAGTA+TGG - chr6.1:11791499-11791518 MS.gene66954:CDS 40.0%
!! AATAGGAAGGGCATCTAGAA+TGG - chr6.1:11794710-11794729 MS.gene66954:intron 40.0%
!! ATAGGAAGGGCATCTAGAAT+GGG - chr6.1:11794711-11794730 MS.gene66954:intron 40.0%
!! ATGGATGAAAAAGGTGTCCA+GGG - chr6.1:11790434-11790453 MS.gene66954:CDS 40.0%
!! TATGGATGAAAAAGGTGTCC+AGG - chr6.1:11790433-11790452 MS.gene66954:CDS 40.0%
!! TCATGTGAAGGGTGTTGTTT+CGG - chr6.1:11793675-11793694 MS.gene66954:intron 40.0%
!!! GTGAATTTTGGTGCCATGAT+TGG - chr6.1:11793233-11793252 MS.gene66954:intron 40.0%
AAAACTGCACTTGTGGTTGG+TGG - chr6.1:11794021-11794040 MS.gene66954:intron 45.0%
AAAAGATCAACAAGCCGTCC+TGG + chr6.1:11794108-11794127 None:intergenic 45.0%
AAATCAGGAACGCCGTCTTT+AGG - chr6.1:11793607-11793626 MS.gene66954:intron 45.0%
AAGCACTTGTGAGGCTATTG+GGG - chr6.1:11792933-11792952 MS.gene66954:intron 45.0%
AATGTCCCTAGTGCTACATG+AGG - chr6.1:11790397-11790416 MS.gene66954:CDS 45.0%
ACCTGATCACCTCCTAAAGA+CGG + chr6.1:11793622-11793641 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAGAT+AGG + chr6.1:11791115-11791134 None:intergenic 45.0%
ATCACCATGGCCAAACCAAT+TGG - chr6.1:11791232-11791251 MS.gene66954:CDS 45.0%
ATCGGCCACATACAATACAC+TGG + chr6.1:11793420-11793439 None:intergenic 45.0%
ATGTTCTGCAGGAGTTTGTC+AGG + chr6.1:11793733-11793752 None:intergenic 45.0%
CAACACATCGCAACCAATCA+TGG + chr6.1:11793249-11793268 None:intergenic 45.0%
CATAGAACTGCAACCACCAA+TGG + chr6.1:11791533-11791552 None:intergenic 45.0%
CCGACGTATATTACAACAGG+TGG + chr6.1:11794450-11794469 None:intergenic 45.0%
CCGTGAAACAGCTAGCAATT+TGG - chr6.1:11794361-11794380 MS.gene66954:intron 45.0%
CGATGTCAAGGTGAGTTCTA+AGG - chr6.1:11793366-11793385 MS.gene66954:intron 45.0%
GAATTGATTGTGGGAACACC+AGG - chr6.1:11794087-11794106 MS.gene66954:CDS 45.0%
GAGCCGACGTATATTACAAC+AGG + chr6.1:11794453-11794472 None:intergenic 45.0%
GCGAGAAATCTATGACCGAA+AGG - chr6.1:11794544-11794563 MS.gene66954:intron 45.0%
GCGGAATACATTAAGACCTG+AGG + chr6.1:11794249-11794268 None:intergenic 45.0%
GGGATTGCTTGCATTTGAAC+AGG + chr6.1:11793784-11793803 None:intergenic 45.0%
GGTGTTAACACCATAGCTAG+AGG + chr6.1:11793937-11793956 None:intergenic 45.0%
GTAAGCACTTGTGAGGCTAT+TGG - chr6.1:11792931-11792950 MS.gene66954:intron 45.0%
GTGATATAGAACGACGACGA+CGG - chr6.1:11790247-11790266 MS.gene66954:CDS 45.0%
TACGAGAGAGCTCAGTATAC+AGG - chr6.1:11793957-11793976 MS.gene66954:intron 45.0%
TCGGCCACATACAATACACT+GGG + chr6.1:11793419-11793438 None:intergenic 45.0%
TGAGGTGTATATTGGGGGTA+TGG - chr6.1:11790415-11790434 MS.gene66954:CDS 45.0%
TGGTCTGTTAGGTTCACCAA+CGG + chr6.1:11794334-11794353 None:intergenic 45.0%
TGTATACTGAGCTCTCTCGT+AGG + chr6.1:11793958-11793977 None:intergenic 45.0%
TGTGAATTGATAAGCTCCCG+AGG + chr6.1:11794831-11794850 None:intergenic 45.0%
TGTTCTGCAGGAGTTTGTCA+GGG + chr6.1:11793732-11793751 None:intergenic 45.0%
TTTAGGAGGTGATCAGGTTC+AGG - chr6.1:11793624-11793643 MS.gene66954:intron 45.0%
TTTCTTGAACGTTGAAGCGG+AGG - chr6.1:11791296-11791315 MS.gene66954:CDS 45.0%
! GGGGAAGAACATGCTTGTTT+TGG - chr6.1:11793816-11793835 MS.gene66954:intron 45.0%
! GGTAGAGGGGTTGATCTATT+AGG - chr6.1:11794630-11794649 MS.gene66954:intron 45.0%
! GTTGTGGCTACTGGAGTTTT+GGG - chr6.1:11794609-11794628 MS.gene66954:intron 45.0%
!! AAGGGTTTTCTCTGGAGGAA+AGG - chr6.1:11794860-11794879 MS.gene66954:CDS 45.0%
!! AAGTGGACTGCATGCTTCAA+AGG - chr6.1:11794178-11794197 MS.gene66954:intron 45.0%
!! AATTGGTTTGGCCATGGTGA+TGG + chr6.1:11791233-11791252 None:intergenic 45.0%
!! AGGGTTTTCTCTGGAGGAAA+GGG - chr6.1:11794861-11794880 MS.gene66954:CDS 45.0%
!! AGTGGACTGCATGCTTCAAA+GGG - chr6.1:11794179-11794198 MS.gene66954:intron 45.0%
!! TCAAAGGGGTTTTCGAGATC+AGG - chr6.1:11794194-11794213 MS.gene66954:intron 45.0%
!! TTAGCTTTTTATGGCCCGTG+CGG - chr6.1:11791693-11791712 MS.gene66954:CDS 45.0%
!!! ATGCTTGTTTTGGCCGATAC+AGG - chr6.1:11793826-11793845 MS.gene66954:intron 45.0%
!!! CTACTGGAGTTTTGGGTAGA+GGG - chr6.1:11794616-11794635 MS.gene66954:intron 45.0%
!!! TACTGGAGTTTTGGGTAGAG+GGG - chr6.1:11794617-11794636 MS.gene66954:intron 45.0%
ACCAGAGAGATGCTCTTCCT+GGG - chr6.1:11793389-11793408 MS.gene66954:intron 50.0%
ACCAGTGTGAGAGTTGTGGA+TGG + chr6.1:11790201-11790220 None:intergenic 50.0%
AGATGCAGGGAACGATGTCA+AGG - chr6.1:11793354-11793373 MS.gene66954:intron 50.0%
AGCGGAGGAATCGAAGACAA+TGG - chr6.1:11791311-11791330 MS.gene66954:CDS 50.0%
AGGCTATTGGGGAGAGCTTA+TGG - chr6.1:11792944-11792963 MS.gene66954:intron 50.0%
ATGGCATGTACCTAGGTGCA+TGG + chr6.1:11790951-11790970 None:intergenic 50.0%
ATTTATGGTCGGCGAGTTCC+CGG - chr6.1:11794584-11794603 MS.gene66954:intron 50.0%
CACGCGAAATTGCTCGGAAA+AGG - chr6.1:11793988-11794007 MS.gene66954:intron 50.0%
CAGCTGCTTCTATGTTCTGC+AGG + chr6.1:11793744-11793763 None:intergenic 50.0%
CCATGGCCAAACCAATTGGT+TGG - chr6.1:11791236-11791255 MS.gene66954:CDS 50.0%
CGGCCACATACAATACACTG+GGG + chr6.1:11793418-11793437 None:intergenic 50.0%
CTGAGTGGGAAGGCTAAGAA+GGG + chr6.1:11790909-11790928 None:intergenic 50.0%
CTGCAGAACATAGAAGCAGC+TGG - chr6.1:11793742-11793761 MS.gene66954:intron 50.0%
CTTTCATCTCACCACCACCA+TGG + chr6.1:11790302-11790321 None:intergenic 50.0%
GAAGGTGAATGAGAGAGTGG+TGG - chr6.1:11790276-11790295 MS.gene66954:CDS 50.0%
GAGCCCCAGTGTATTGTATG+TGG - chr6.1:11793412-11793431 MS.gene66954:intron 50.0%
GCGGTAAAGTTGTCTAGCCA+TGG + chr6.1:11794052-11794071 None:intergenic 50.0%
GCTTGCATTTGAACAGGCGT+AGG + chr6.1:11793778-11793797 None:intergenic 50.0%
GGAGGAATCGAAGACAATGG+CGG - chr6.1:11791314-11791333 MS.gene66954:CDS 50.0%
GTTCTTCCCCATCAAAGCAG+CGG + chr6.1:11793806-11793825 None:intergenic 50.0%
TCCAAATCCTCATCCAGTGC+TGG - chr6.1:11793517-11793536 MS.gene66954:intron 50.0%
TCCATCCACAACTCTCACAC+TGG - chr6.1:11790197-11790216 MS.gene66954:CDS 50.0%
TCCTCCAGAGAAAACCCTTG+TGG + chr6.1:11794859-11794878 None:intergenic 50.0%
TCTGAGTGGGAAGGCTAAGA+AGG + chr6.1:11790910-11790929 None:intergenic 50.0%
TGATCACTCTACTGGCAGTC+TGG + chr6.1:11793172-11793191 None:intergenic 50.0%
TGATTGTGGGAACACCAGGA+CGG - chr6.1:11794091-11794110 MS.gene66954:CDS 50.0%
TGGGAAGGTGAATGAGAGAG+TGG - chr6.1:11790273-11790292 MS.gene66954:CDS 50.0%
TGGTCTGTTTCCATGCACCT+AGG - chr6.1:11790938-11790957 MS.gene66954:CDS 50.0%
TGTCACCAGTGTGAGAGTTG+TGG + chr6.1:11790205-11790224 None:intergenic 50.0%
TTCTTCCCCATCAAAGCAGC+GGG + chr6.1:11793805-11793824 None:intergenic 50.0%
! AAGACATCCAGCACTGGATG+AGG + chr6.1:11793527-11793546 None:intergenic 50.0%
! AAGAGGCATGGCATGTACCT+AGG + chr6.1:11790958-11790977 None:intergenic 50.0%
! ACCACAAGGGTTTTCTCTGG+AGG - chr6.1:11794855-11794874 MS.gene66954:CDS 50.0%
! GAAGAGCACGCGAAATTGCT+CGG - chr6.1:11793982-11794001 MS.gene66954:intron 50.0%
! GCATCTAGAATGGGAGAGGA+AGG - chr6.1:11794720-11794739 MS.gene66954:intron 50.0%
! GGTTGTGGCTACTGGAGTTT+TGG - chr6.1:11794608-11794627 MS.gene66954:intron 50.0%
! GTGGACTGCATGCTTCAAAG+GGG - chr6.1:11794180-11794199 MS.gene66954:intron 50.0%
! TCCAGCACTGGATGAGGATT+TGG + chr6.1:11793521-11793540 None:intergenic 50.0%
! TCGGCTGCAGGTAGCTTTTT+AGG + chr6.1:11793556-11793575 None:intergenic 50.0%
!! AAGGGCATCTAGAATGGGAG+AGG - chr6.1:11794716-11794735 MS.gene66954:intron 50.0%
!! ACGGCCTTGTTTGGTCTGTT+AGG + chr6.1:11794345-11794364 None:intergenic 50.0%
!! AGCTGTTTCACGGCCTTGTT+TGG + chr6.1:11794354-11794373 None:intergenic 50.0%
!! ATATACGTCGGCTCGAGACT+CGG - chr6.1:11794459-11794478 MS.gene66954:intron 50.0%
!! CATGGTGGTGGTGAGATGAA+AGG - chr6.1:11790300-11790319 MS.gene66954:CDS 50.0%
!! CCAACCAATTGGTTTGGCCA+TGG + chr6.1:11791239-11791258 None:intergenic 50.0%
!! GCTGCAGGTAGCTTTTTAGG+TGG + chr6.1:11793553-11793572 None:intergenic 50.0%
!! GTTTTGGCCGATACAGGTTC+AGG - chr6.1:11793832-11793851 MS.gene66954:intron 50.0%
!!! GCAGGTAGCTTTTTAGGTGG+TGG + chr6.1:11793550-11793569 None:intergenic 50.0%
!!! GCTACTGGAGTTTTGGGTAG+AGG - chr6.1:11794615-11794634 MS.gene66954:intron 50.0%
ACTCCAGTAGCCACAACCAC+CGG + chr6.1:11794606-11794625 None:intergenic 55.0%
AGAACGACGACGACGGTTGT+GGG - chr6.1:11790254-11790273 MS.gene66954:CDS 55.0%
CCAGAGAGATGCTCTTCCTG+GGG - chr6.1:11793390-11793409 MS.gene66954:intron 55.0%
GAATGAGAGAGTGGTGGCCA+TGG - chr6.1:11790282-11790301 MS.gene66954:CDS 55.0%
GACCAGAGAGATGCTCTTCC+TGG - chr6.1:11793388-11793407 MS.gene66954:intron 55.0%
GATAAGCTCCCGAGGTACAG+CGG + chr6.1:11794823-11794842 None:intergenic 55.0%
TAGAACGACGACGACGGTTG+TGG - chr6.1:11790253-11790272 MS.gene66954:CDS 55.0%
TCAGGAACGCCGTCTTTAGG+AGG - chr6.1:11793610-11793629 MS.gene66954:intron 55.0%
TCTGCAGGAGTTTGTCAGGG+AGG + chr6.1:11793729-11793748 None:intergenic 55.0%
TCTTCCCCATCAAAGCAGCG+GGG + chr6.1:11793804-11793823 None:intergenic 55.0%
TGGTGGAAGACATCCAGCAC+TGG + chr6.1:11793533-11793552 None:intergenic 55.0%
! AGCAATCCCCGCTGCTTTGA+TGG - chr6.1:11793795-11793814 MS.gene66954:intron 55.0%
! CAATCCCCGCTGCTTTGATG+GGG - chr6.1:11793797-11793816 MS.gene66954:intron 55.0%
! CACGGCTTTGTCACAACCTC+AGG - chr6.1:11794230-11794249 MS.gene66954:intron 55.0%
! GCAATCCCCGCTGCTTTGAT+GGG - chr6.1:11793796-11793815 MS.gene66954:intron 55.0%
! GCCGTCTTTAGGAGGTGATC+AGG - chr6.1:11793618-11793637 MS.gene66954:intron 55.0%
! TAAATGCACTCGTCGGCTGC+AGG + chr6.1:11793568-11793587 None:intergenic 55.0%
! TCGAAGACAATGGCGGAGAG+TGG - chr6.1:11791321-11791340 MS.gene66954:CDS 55.0%
!! GAAGGGTGTTGTTTCGGCAC+CGG - chr6.1:11793681-11793700 MS.gene66954:intron 55.0%
!! TATACGTCGGCTCGAGACTC+GGG - chr6.1:11794460-11794479 MS.gene66954:intron 55.0%
!! TGTGGTTGGTGGTGATGCCA+TGG - chr6.1:11794032-11794051 MS.gene66954:intron 55.0%
AAGGTCCAGGGTTCGAACCC+TGG + chr6.1:11790454-11790473 None:intergenic 60.0%
ACAACAGTGCAGCGACGAGG+TGG - chr6.1:11790222-11790241 MS.gene66954:CDS 60.0%
ACAATACACTGGGGCTCCCC+AGG + chr6.1:11793409-11793428 None:intergenic 60.0%
CTCCAGTAGCCACAACCACC+GGG + chr6.1:11794605-11794624 None:intergenic 60.0%
GAGACTCGGGGCAGATCTCT+TGG - chr6.1:11794473-11794492 MS.gene66954:intron 60.0%
GAGGGAGAGATAACCGACCG+TGG + chr6.1:11791193-11791212 None:intergenic 60.0%
GCAGCAGGGTCGTTGAGAGA+GGG + chr6.1:11791211-11791230 None:intergenic 60.0%
GTGACAACAGTGCAGCGACG+AGG - chr6.1:11790219-11790238 MS.gene66954:CDS 60.0%
TGAGAGAGTGGTGGCCATGG+TGG - chr6.1:11790285-11790304 MS.gene66954:CDS 60.0%
TTCCCGGTGGTTGTGGCTAC+TGG - chr6.1:11794600-11794619 MS.gene66954:intron 60.0%
!! ATACGTCGGCTCGAGACTCG+GGG - chr6.1:11794461-11794480 MS.gene66954:intron 60.0%
!! CCCCAGGAAGAGCATCTCTC+TGG + chr6.1:11793393-11793412 None:intergenic 60.0%
!! TGGCCATGGTGATGGCAGCA+GGG + chr6.1:11791225-11791244 None:intergenic 60.0%
!! TTGGCCATGGTGATGGCAGC+AGG + chr6.1:11791226-11791245 None:intergenic 60.0%
AAGCTCCCGAGGTACAGCGG+CGG + chr6.1:11794820-11794839 None:intergenic 65.0%
CGACCCTGCTGCCATCACCA+TGG - chr6.1:11791219-11791238 MS.gene66954:CDS 65.0%
CGACGACGACGGTTGTGGGA+AGG - chr6.1:11790258-11790277 MS.gene66954:CDS 65.0%
CGTTTACCCGTGCTGCCGCA+CGG + chr6.1:11791711-11791730 None:intergenic 65.0%
GAGAGTGGTGGCCATGGTGG+TGG - chr6.1:11790288-11790307 MS.gene66954:CDS 65.0%
GGCAGCAGGGTCGTTGAGAG+AGG + chr6.1:11791212-11791231 None:intergenic 65.0%
GGTGTCCAGGGTTCGAACCC+TGG - chr6.1:11790446-11790465 MS.gene66954:CDS 65.0%
GTTTACCCGTGCTGCCGCAC+GGG + chr6.1:11791710-11791729 None:intergenic 65.0%
TATGGTCGGCGAGTTCCCGG+TGG - chr6.1:11794587-11794606 MS.gene66954:intron 65.0%
TTATGGCCCGTGCGGCAGCA+CGG - chr6.1:11791701-11791720 MS.gene66954:CDS 65.0%
CGGCGAGTTCCCGGTGGTTG+TGG - chr6.1:11794593-11794612 MS.gene66954:intron 70.0%
TATGGCCCGTGCGGCAGCAC+GGG - chr6.1:11791702-11791721 MS.gene66954:CDS 70.0%
! CGGGTGCCGCCGCTGTACCT+CGG - chr6.1:11794811-11794830 MS.gene66954:CDS 75.0%
! GGGTGCCGCCGCTGTACCTC+GGG - chr6.1:11794812-11794831 MS.gene66954:CDS 75.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 11790177 11794908 11790177 ID=MS.gene66954
chr6.1 mRNA 11790177 11794908 11790177 ID=MS.gene66954.t1;Parent=MS.gene66954
chr6.1 exon 11794806 11794908 11794806 ID=MS.gene66954.t1.exon1;Parent=MS.gene66954.t1
chr6.1 CDS 11794806 11794908 11794806 ID=cds.MS.gene66954.t1;Parent=MS.gene66954.t1
chr6.1 exon 11794071 11794125 11794071 ID=MS.gene66954.t1.exon2;Parent=MS.gene66954.t1
chr6.1 CDS 11794071 11794125 11794071 ID=cds.MS.gene66954.t1;Parent=MS.gene66954.t1
chr6.1 exon 11790177 11791851 11790177 ID=MS.gene66954.t1.exon3;Parent=MS.gene66954.t1
chr6.1 CDS 11790177 11791851 11790177 ID=cds.MS.gene66954.t1;Parent=MS.gene66954.t1
Gene Sequence

>MS.gene66954

ATGTCATGCACTCTTTCTTCTCCATCCACAACTCTCACACTGGTGACAACAGTGCAGCGACGAGGTGGTAGTGATATAGAACGACGACGACGGTTGTGGGAAGGTGAATGAGAGAGTGGTGGCCATGGTGGTGGTGAGATGAAAGGTGATATGTGTTCAAAGAGAAAAGAGAGAATACGAGGATAAAAGAGATAATGTGATGATGAGGTGAAATTACTAAAATGTCCCTAGTGCTACATGAGGTGTATATTGGGGGTATGGATGAAAAAGGTGTCCAGGGTTCGAACCCTGGACCTTGTATATATTATGCATTGTCCTTACTAACTGAATTAAGCTCACGAGAACTTTTGAAGAGATTCTTATAATATTATAAATTTTTCTGCAAAATTGTATTCAAAAATATAAATTCTACATATGAGTTTACTTTAAAGGAAAGACCAAAAATGAAGATGAAAAGATGACTAAAAGTTGAAGAATTTTTTTAGAATGACTAAAACAAAAAGTTAACATAAATATGGATAAAATACATATTTAATCCTAATTTTTAGAATGACTAAAACAAAAAGTTAACATAAATATGGATAAAATACATATTTAATCCTAAATTCAATCTATACAAATTCAAAAACTATCCTTTATATCTAATCCTAGCAAACATGCAAACCCTAATTGCCTAACCCTAATCCTAAAAAAATGGCTCTAAAAATTTGAATTTCGAAATTAATGTTTCCCTTCTTAGCCTTCCCACTCAGAATTTATGTTGGTCTGTTTCCATGCACCTAGGTACATGCCATGCCTCTTTCAAATTTGAATTTCAAATTCCAATTTCAAAGGAAAGGTAGGTATATGGAGTTTTCTTTTTCCACGCGTTATTTTGTTTTCGAAGACACTCCTTTTATGAAACTCTCTTCTCTGCCCAGCTTCACTTCATTACACCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTTTCTCTCCATGCCAATAAAGAAAATTGCCACGGTCGGTTATCTCTCCCTCTCTCAACGACCCTGCTGCCATCACCATGGCCAAACCAATTGGTTGGTTAGATTAAATTGTGTTAATTGAAATGGTTGTTCAGATTTCTTGAACGTTGAAGCGGAGGAATCGAAGACAATGGCGGAGAGTGGTCAGATTTCTTTATTCTGTTCTTCCTGGTTTTTGTGTTGTGTTGTGCCACTGAATTTTACTTTTGCAGGTTTTGGGAGAAGCAGAGAAAAAAGGCTTCTAACGTAATGTCAGATATAAGACTCATCTTGCTGTTACAATGTCTTTGAACTAATAGAAGGTGATGGTAATGGAGTATGGTATGATGTCCATTGGTGGTTGCAGTTCTATGTTATTTTTACATCCATAAGGACATATGTAATAATAACCACATTAATTTAATTATTCACAGTACATTATAATGTATCGCGTGTGTCATAGACGTTTCGCTAATTTCGTTCGACAATTCACAATGAATAGCAAGTAAAGTTTTTAGCTTTTTATGGCCCGTGCGGCAGCACGGGTAAACGATCTAGTTGTTTTTTAATTGGTTCTAATAAAATCACTTCGAGAACCTTCATATGCAAACTTTGGAAAGAAAAACAAAAAAAAAAAATGTTTCATTAAAAATTGTACATGTTCCTCTTCGAATCGTATTTGATTCAAAATCGAAAAATCACATGCATGCTTACGTCACTCTCCATTTCCCAAAACCCTAAACATGGTTGATGATTCCAACGATGACCCATCAAAGTTTCAATCGCTTTCAACCGATTCACCTAATGGTAATGTTCCTAATTCGTCTTCCTGTATTGAAATCTATTCTTCAATATTCAATTTCATTTTTTTTTTCTGGGTATTGTTGATTGAATATATTTCAATTGCTGTTTTCAAATTTTGGTTTGATTCTGTATAATTCAGTGTTAACAAATGGTAAAATTGCTTTTTGTATAAGTTATAAGCTATATTTATAAGTTATTTTAGAGAACTTATGATGGTTGAAAACAACTTATGAAGAATGCCATAAGTTGTTTTGTAATTTCTCCCAAATTGTCTACTTTTGGAATTATAAGGGAGACCATGTTTGAATAAACAACTTATTTGCAGCTTATATAATAAATAAGAGCTTATGATTAAGTCATTTCTATAGCAGATGATTAAGTGTATGTTTGATTCCACTTTTGGAGGATGTAAAATTGATTATAGAGGTGTATAATTGATTTTGACATGTTTGGTTGCTTTCAAGTAGAATTGATTTTGCCGCAAGAATTGATTCTAGTTGAAGTTAGGATTTGTAGCTTTTGATTCTAAAATTGATTTTTTACTCTAAAATTTATTGTTCAATTCACTTTTAGATGGAATCGGTTGACTCAAAATCAATTCTTGTCACTACAGAAGCAAACATACACAATTGTTTTCGTATAAGTTATAAGCTATTTTCATAAGTCATCTTAGCAAACTCATGAAAATTGGCTGAACACAGCTTATAAAGAATGTCATCAGCTGTTTTCGTAAGTTCTTCCAATACTTTCACAAAACTTATGCTAGTAATGAGAAAACCCTTTTTGGAATTTTAGGGCTAGTTTAATTTGAGTTTTCTGTTTTTATTTTCATTTTAGCTAATAAACTTGATAGAATAGAATATAGATTCAGTACTTTCTTCTCTATTTTCTTTTGAAATTTTTGAAAACAACCCATTTGGATTGTCATATTTGAGCTCATCTATTAGCGTAAGCACTTGTGAGGCTATTGGGGAGAGCTTATGGAAATAGCTTACGCCATGTTGATAAGGTATTTGTAGCTTATGTTCATAAGCTCTCCATGATATCTTATATGAAAACAATTTGACTTTATTTTATCTTTTGTTATAGTAATAGCTTATACATAAACATTTATATGATAAGCACTTAATTAAGTTGTTTATCCAAACATGGTTGTTACTGTTGGTGTTGTATTGCACATTCAGTGCCAGACTGCCAGTAGAGTGATCAATCTTTCTGTTAATTTAAGTTAGAAGTTCATTGTTTCTCTAGTGAATTTTGGTGCCATGATTGGTTGCGATGTGTTGCATTGTCGTTATTGCGGAAAATTGTGGACAAGTTGCGATATGTTAAGTCTCTCAAAATACGAAGCCAATTAATCTTGTTTATTTTAGATGCAGGGAACGATGTCAAGGTGAGTTCTAAGGACCAGAGAGATGCTCTTCCTGGGGAGCCCCAGTGTATTGTATGTGGCCGATACGGTGAATATATATGTGATGAAACTGATGATGATGTTTGTAGTTTGGAATGTAAACAATCGGTACTATCTCGAATTTCCAAATCCTCATCCAGTGCTGGATGTCTTCCACCACCTAAAAAGCTACCTGCAGCCGACGAGTGCATTTATGTTAGAGATACTGACAACAAATCAGGAACGCCGTCTTTAGGAGGTGATCAGGTTCAGGCTGAATTGCTTAGAAAGAAACTCGACATTCATGTGAAGGGTGTTGTTTCGGCACCGGTTATGTCGTTTGCTTCATGTAACCTCCCTGACAAACTCCTGCAGAACATAGAAGCAGCTGGTTATGAGATGCCTACGCCTGTTCAAATGCAAGCAATCCCCGCTGCTTTGATGGGGAAGAACATGCTTGTTTTGGCCGATACAGGTTCAGGAAAGTCTGCTTCGTTTCTTATTCCAATAATATCTCGTTGTGCAAGTCATCGTTTGATGTATGTTTCGGATAACAAAAAGCCTCTAGCTATGGTGTTAACACCTACGAGAGAGCTCAGTATACAGGTTGAAGAGCACGCGAAATTGCTCGGAAAAGGTTTGCTGTTTAAAACTGCACTTGTGGTTGGTGGTGATGCCATGGCTAGACAACTTTACCGCATTCAACAAGGAGTTGAATTGATTGTGGGAACACCAGGACGGCTTGTTGATCTTTTAACAAAAAATGAGATTGATTTAGATGACGTGACGACTTTTGTTGTCGATGAAGTGGACTGCATGCTTCAAAGGGGTTTTCGAGATCAGGTATTGCAGATATTCACGGCTTTGTCACAACCTCAGGTCTTAATGTATTCCGCAACAACGTCCGATTCTTTAGAGAAGATGGCAAACTCTATGGCAAAAGATACAGTGGTTATAACCGTTGGTGAACCTAACAGACCAAACAAGGCCGTGAAACAGCTAGCAATTTGGGTCGAGTCGAAACAAAAGAAGCAGAAACTGTTTGATATTTTAAAAAGCCAGAAACATTTTAAGCCACCTGTTGTAATATACGTCGGCTCGAGACTCGGGGCAGATCTCTTGGCAAACGCAATTACAGTTTCAACAGGAGTTAAAGCTGTTTCAATTCACGGCGAGAAATCTATGACCGAAAGGAGAGAAATAATGCAGTCATTTATGGTCGGCGAGTTCCCGGTGGTTGTGGCTACTGGAGTTTTGGGTAGAGGGGTTGATCTATTAGGCGTAAGACAAGTTATTGTATTCGACATGCCTAATTCGATTAAGGAATATGTACATCAAATAGGAAGGGCATCTAGAATGGGAGAGGAAGGTCAAGCCTTAGTTTTTGTAAACGATGAGAATAAGAATGTTTTTGCAGAGTTAGTCGATGTATTAAAGTCGGGTGCCGCCGCTGTACCTCGGGAGCTTATCAATTCACAGTATACCACAAGGGTTTTCTCTGGAGGAAAGGGTTCAAAGAAAAGAAAATATAGATGA
Protein sequence

>MS.gene66954.t1

MSCTLSSPSTTLTLVTTVQRRGGSDIERRRRLWEGTCHASFKFEFQIPISKESEFWCHDWLRCVALSLLRKIVDKLRYVKSLKIRSQLILFILDAGNDVKVSSKDQRDALPGEPQCIVCGRYGEYICDETDDDVCSLECKQSVLSRISKSSSSAGCLPPPKKLPAADECIYVRDTDNKSGTPSLGGDQVQAELLRKKLDIHVKGVVSAPVMSFASCNLPDKLLQNIEAAGYEMPTPVQMQAIPAALMGKNMLVLADTGSGKSASFLIPIISRCASHRLMYVSDNKKPLAMVLTPTRELSIQVEEHAKLLGKGLLFKTALVVGGDAMARQLYRIQQGVELIVGTPGRLVDLLTKNEIDLDDVTTFVVDEVDCMLQRGFRDQVLQIFTALSQPQVLMYSATTSDSLEKMANSMAKDTVVITVGEPNRPNKAVKQLAIWVESKQKKQKLFDILKSQKHFKPPVVIYVGSRLGADLLANAITVSTGVKAVSIHGEKSMTERREIMQSFMVGEFPVVVATGVLGRGVDLLGVRQVIVFDMPNSIKEYVHQIGRASRMGEEGQALVFVNDENKNVFAELVDVLKSGAAAVPRELINSQYTTRVFSGGKGSKKRKYR