Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27700.t1 | XP_003623902.2 | 99.5 | 426 | 2 | 0 | 57 | 482 | 98 | 523 | 2.20E-243 | 851.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27700.t1 | Q8RXK6 | 90.1 | 426 | 42 | 0 | 57 | 482 | 80 | 505 | 8.0e-226 | 784.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27700.t1 | G7L3K0 | 99.5 | 426 | 2 | 0 | 57 | 482 | 98 | 523 | 1.6e-243 | 851.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene27700 | 0.859607 | 3.68E-63 | -1.69E-46 |
| MS.gene049350 | MS.gene27700 | 0.813469 | 2.52E-51 | -1.69E-46 |
| MS.gene049585 | MS.gene27700 | 0.812788 | 3.56E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene27700 | 0.836903 | 7.12E-57 | -1.69E-46 |
| MS.gene049807 | MS.gene27700 | 0.815658 | 8.26E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene27700 | 0.806765 | 7.02E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene27700 | 0.80296 | 4.38E-49 | -1.69E-46 |
| MS.gene050224 | MS.gene27700 | 0.808223 | 3.44E-50 | -1.69E-46 |
| MS.gene050348 | MS.gene27700 | 0.826493 | 2.63E-54 | -1.69E-46 |
| MS.gene050439 | MS.gene27700 | 0.805725 | 1.16E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene27700 | 0.859438 | 4.14E-63 | -1.69E-46 |
| MS.gene050657 | MS.gene27700 | 0.828827 | 7.24E-55 | -1.69E-46 |
| MS.gene050959 | MS.gene27700 | 0.806665 | 7.37E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene27700 | 0.826696 | 2.35E-54 | -1.69E-46 |
| MS.gene051198 | MS.gene27700 | 0.820138 | 8.03E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene27700 | 0.809662 | 1.69E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene27700 | 0.847521 | 1.10E-59 | -1.69E-46 |
| MS.gene051388 | MS.gene27700 | 0.817876 | 2.63E-52 | -1.69E-46 |
| MS.gene05150 | MS.gene27700 | 0.814154 | 1.78E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene27700 | 0.823724 | 1.19E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene27700 | 0.809413 | 1.92E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene27700 | 0.802312 | 5.95E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene27700 | 0.813094 | 3.05E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene27700 | 0.84166 | 4.15E-58 | -1.69E-46 |
| MS.gene051800 | MS.gene27700 | 0.829057 | 6.37E-55 | -1.69E-46 |
| MS.gene052020 | MS.gene27700 | 0.807103 | 5.95E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene27700 | 0.815267 | 1.01E-51 | -1.69E-46 |
| MS.gene052311 | MS.gene27700 | 0.811154 | 8.07E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene27700 | 0.828338 | 9.50E-55 | -1.69E-46 |
| MS.gene052514 | MS.gene27700 | 0.843548 | 1.31E-58 | -1.69E-46 |
| MS.gene052516 | MS.gene27700 | 0.84303 | 1.80E-58 | -1.69E-46 |
| MS.gene052609 | MS.gene27700 | 0.855892 | 4.65E-62 | -1.69E-46 |
| MS.gene052665 | MS.gene27700 | 0.825516 | 4.49E-54 | -1.69E-46 |
| MS.gene052732 | MS.gene27700 | 0.850015 | 2.23E-60 | -1.69E-46 |
| MS.gene052775 | MS.gene27700 | 0.801039 | 1.09E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene27700 | 0.855932 | 4.53E-62 | -1.69E-46 |
| MS.gene053143 | MS.gene27700 | 0.819423 | 1.17E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene27700 | 0.858021 | 1.10E-62 | -1.69E-46 |
| MS.gene05315 | MS.gene27700 | 0.800494 | 1.40E-48 | -1.69E-46 |
| MS.gene053164 | MS.gene27700 | 0.812169 | 4.85E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene27700 | 0.812246 | 4.67E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene27700 | 0.835354 | 1.76E-56 | -1.69E-46 |
| MS.gene053621 | MS.gene27700 | 0.822979 | 1.77E-53 | -1.69E-46 |
| MS.gene054576 | MS.gene27700 | 0.822316 | 2.53E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene27700 | 0.871778 | 5.27E-67 | -1.69E-46 |
| MS.gene05462 | MS.gene27700 | 0.803028 | 4.24E-49 | -1.69E-46 |
| MS.gene054824 | MS.gene27700 | 0.817563 | 3.09E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene27700 | 0.86923 | 3.62E-66 | -1.69E-46 |
| MS.gene055466 | MS.gene27700 | 0.845868 | 3.10E-59 | -1.69E-46 |
| MS.gene055467 | MS.gene27700 | 0.823464 | 1.37E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene27700 | 0.845883 | 3.08E-59 | -1.69E-46 |
| MS.gene055469 | MS.gene27700 | 0.891524 | 3.67E-74 | -1.69E-46 |
| MS.gene055513 | MS.gene27700 | 0.835303 | 1.81E-56 | -1.69E-46 |
| MS.gene055537 | MS.gene27700 | 0.835977 | 1.23E-56 | -1.69E-46 |
| MS.gene055580 | MS.gene27700 | -0.829103 | 6.21E-55 | -1.69E-46 |
| MS.gene055778 | MS.gene27700 | 0.805107 | 1.57E-49 | -1.69E-46 |
| MS.gene055861 | MS.gene27700 | -0.802028 | 6.81E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene27700 | 0.83702 | 6.65E-57 | -1.69E-46 |
| MS.gene055926 | MS.gene27700 | 0.814641 | 1.39E-51 | -1.69E-46 |
| MS.gene056043 | MS.gene27700 | -0.822356 | 2.47E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene27700 | 0.833014 | 6.80E-56 | -1.69E-46 |
| MS.gene056308 | MS.gene27700 | 0.850103 | 2.11E-60 | -1.69E-46 |
| MS.gene056507 | MS.gene27700 | 0.874466 | 6.61E-68 | -1.69E-46 |
| MS.gene05686 | MS.gene27700 | 0.813389 | 2.62E-51 | -1.69E-46 |
| MS.gene057294 | MS.gene27700 | 0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene057360 | MS.gene27700 | 0.837623 | 4.66E-57 | -1.69E-46 |
| MS.gene057869 | MS.gene27700 | 0.81267 | 3.77E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene27700 | 0.860443 | 2.06E-63 | -1.69E-46 |
| MS.gene058010 | MS.gene27700 | 0.82956 | 4.81E-55 | -1.69E-46 |
| MS.gene058087 | MS.gene27700 | 0.824741 | 6.85E-54 | -1.69E-46 |
| MS.gene058289 | MS.gene27700 | 0.829436 | 5.15E-55 | -1.69E-46 |
| MS.gene058339 | MS.gene27700 | 0.804013 | 2.65E-49 | -1.69E-46 |
| MS.gene058647 | MS.gene27700 | 0.809523 | 1.81E-50 | -1.69E-46 |
| MS.gene058649 | MS.gene27700 | 0.841839 | 3.73E-58 | -1.69E-46 |
| MS.gene058668 | MS.gene27700 | 0.873684 | 1.21E-67 | -1.69E-46 |
| MS.gene058919 | MS.gene27700 | 0.805209 | 1.49E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene27700 | 0.823528 | 1.32E-53 | -1.69E-46 |
| MS.gene059570 | MS.gene27700 | 0.830005 | 3.75E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene27700 | 0.811075 | 8.39E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene27700 | 0.846415 | 2.20E-59 | -1.69E-46 |
| MS.gene059965 | MS.gene27700 | 0.802597 | 5.20E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene27700 | 0.802562 | 5.29E-49 | -1.69E-46 |
| MS.gene060380 | MS.gene27700 | 0.816116 | 6.53E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene27700 | 0.832337 | 1.00E-55 | -1.69E-46 |
| MS.gene060587 | MS.gene27700 | 0.819183 | 1.33E-52 | -1.69E-46 |
| MS.gene060637 | MS.gene27700 | 0.818298 | 2.11E-52 | -1.69E-46 |
| MS.gene061006 | MS.gene27700 | 0.834509 | 2.88E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034072 | MS.gene27700 | PPI |
| MS.gene82680 | MS.gene27700 | PPI |
| MS.gene82661 | MS.gene27700 | PPI |
| MS.gene061314 | MS.gene27700 | PPI |
| MS.gene042577 | MS.gene27700 | PPI |
| MS.gene66954 | MS.gene27700 | PPI |
| MS.gene027145 | MS.gene27700 | PPI |
| MS.gene029703 | MS.gene27700 | PPI |
| MS.gene061312 | MS.gene27700 | PPI |
| MS.gene61608 | MS.gene27700 | PPI |
| MS.gene026769 | MS.gene27700 | PPI |
| MS.gene069842 | MS.gene27700 | PPI |
| MS.gene75367 | MS.gene27700 | PPI |
| MS.gene27700 | MS.gene61606 | PPI |
| MS.gene66606 | MS.gene27700 | PPI |
| MS.gene070777 | MS.gene27700 | PPI |
| MS.gene60217 | MS.gene27700 | PPI |
| MS.gene27700 | MS.gene66605 | PPI |
| MS.gene61610 | MS.gene27700 | PPI |
| MS.gene034071 | MS.gene27700 | PPI |
| MS.gene070779 | MS.gene27700 | PPI |
| MS.gene47393 | MS.gene27700 | PPI |
| MS.gene051381 | MS.gene27700 | PPI |
| MS.gene034969 | MS.gene27700 | PPI |
| MS.gene070781 | MS.gene27700 | PPI |
| MS.gene051382 | MS.gene27700 | PPI |
| MS.gene061316 | MS.gene27700 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27700.t1 | MTR_7g076820 | 88.762 | 525 | 11 | 3 | 3 | 482 | 2 | 523 | 0.0 | 892 |
| MS.gene27700.t1 | MTR_7g076830 | 86.923 | 520 | 23 | 4 | 3 | 482 | 2 | 516 | 0.0 | 876 |
| MS.gene27700.t1 | MTR_7g076800 | 96.984 | 431 | 13 | 0 | 52 | 482 | 84 | 514 | 0.0 | 867 |
| MS.gene27700.t1 | MTR_0915s0010 | 97.872 | 282 | 6 | 0 | 121 | 402 | 1 | 282 | 0.0 | 572 |
| MS.gene27700.t1 | MTR_2g438110 | 39.096 | 376 | 225 | 3 | 99 | 472 | 26 | 399 | 1.47e-92 | 287 |
| MS.gene27700.t1 | MTR_4g125970 | 39.691 | 388 | 221 | 3 | 98 | 472 | 19 | 406 | 1.18e-90 | 282 |
| MS.gene27700.t1 | MTR_2g039960 | 40.599 | 367 | 216 | 2 | 108 | 472 | 40 | 406 | 3.56e-90 | 281 |
| MS.gene27700.t1 | MTR_4g125970 | 39.691 | 388 | 221 | 3 | 98 | 472 | 36 | 423 | 3.75e-90 | 281 |
| MS.gene27700.t1 | MTR_2g099620 | 40.984 | 366 | 212 | 4 | 110 | 472 | 26 | 390 | 3.80e-88 | 275 |
| MS.gene27700.t1 | MTR_2g099620 | 40.984 | 366 | 212 | 4 | 110 | 472 | 42 | 406 | 3.98e-88 | 276 |
| MS.gene27700.t1 | MTR_8g018400 | 40.599 | 367 | 216 | 2 | 108 | 472 | 40 | 406 | 6.38e-88 | 275 |
| MS.gene27700.t1 | MTR_1g012420 | 39.153 | 378 | 222 | 6 | 110 | 480 | 48 | 424 | 1.15e-83 | 265 |
| MS.gene27700.t1 | MTR_3g107420 | 38.360 | 378 | 225 | 6 | 110 | 480 | 48 | 424 | 8.22e-82 | 260 |
| MS.gene27700.t1 | MTR_4g010565 | 38.624 | 378 | 224 | 6 | 110 | 480 | 125 | 501 | 2.53e-81 | 261 |
| MS.gene27700.t1 | MTR_7g056830 | 34.783 | 368 | 234 | 4 | 110 | 472 | 11 | 377 | 2.12e-66 | 220 |
| MS.gene27700.t1 | MTR_3g449250 | 34.383 | 381 | 237 | 5 | 102 | 472 | 83 | 460 | 5.76e-66 | 222 |
| MS.gene27700.t1 | MTR_6g082080 | 34.239 | 368 | 236 | 4 | 110 | 472 | 11 | 377 | 8.91e-66 | 218 |
| MS.gene27700.t1 | MTR_3g449250 | 34.383 | 381 | 237 | 5 | 102 | 472 | 83 | 460 | 1.72e-65 | 221 |
| MS.gene27700.t1 | MTR_4g134170 | 31.948 | 385 | 236 | 3 | 115 | 473 | 293 | 677 | 2.04e-63 | 218 |
| MS.gene27700.t1 | MTR_3g467550 | 32.440 | 373 | 234 | 5 | 110 | 465 | 118 | 489 | 2.68e-62 | 213 |
| MS.gene27700.t1 | MTR_3g467550 | 32.345 | 371 | 233 | 5 | 112 | 465 | 89 | 458 | 1.30e-61 | 210 |
| MS.gene27700.t1 | MTR_1g061970 | 34.240 | 441 | 242 | 16 | 65 | 471 | 46 | 472 | 1.45e-61 | 209 |
| MS.gene27700.t1 | MTR_6g005320 | 32.181 | 376 | 227 | 4 | 115 | 464 | 255 | 628 | 3.15e-61 | 212 |
| MS.gene27700.t1 | MTR_6g005550 | 32.663 | 398 | 249 | 7 | 92 | 473 | 142 | 536 | 5.97e-61 | 212 |
| MS.gene27700.t1 | MTR_5g090120 | 32.540 | 378 | 240 | 6 | 106 | 472 | 78 | 451 | 9.80e-61 | 209 |
| MS.gene27700.t1 | MTR_2g032630 | 33.777 | 376 | 234 | 6 | 92 | 453 | 473 | 847 | 4.30e-59 | 211 |
| MS.gene27700.t1 | MTR_2g100230 | 32.527 | 372 | 231 | 7 | 110 | 468 | 102 | 466 | 5.46e-59 | 202 |
| MS.gene27700.t1 | MTR_3g049990 | 35.106 | 376 | 234 | 5 | 103 | 469 | 146 | 520 | 2.26e-58 | 206 |
| MS.gene27700.t1 | MTR_4g049910 | 34.010 | 394 | 220 | 15 | 105 | 471 | 51 | 431 | 4.61e-58 | 198 |
| MS.gene27700.t1 | MTR_4g079320 | 34.146 | 369 | 237 | 4 | 110 | 472 | 20 | 388 | 8.66e-58 | 204 |
| MS.gene27700.t1 | MTR_2g041140 | 34.545 | 385 | 229 | 7 | 101 | 469 | 133 | 510 | 2.87e-57 | 202 |
| MS.gene27700.t1 | MTR_5g027840 | 32.533 | 375 | 228 | 6 | 92 | 451 | 94 | 458 | 4.25e-57 | 197 |
| MS.gene27700.t1 | MTR_2g007000 | 32.857 | 350 | 223 | 5 | 115 | 453 | 510 | 858 | 1.75e-54 | 197 |
| MS.gene27700.t1 | MTR_4g105100 | 30.978 | 368 | 236 | 6 | 110 | 465 | 208 | 569 | 2.58e-54 | 192 |
| MS.gene27700.t1 | MTR_2g055850 | 34.218 | 339 | 213 | 4 | 110 | 438 | 92 | 430 | 4.27e-54 | 190 |
| MS.gene27700.t1 | MTR_8g018370 | 33.432 | 338 | 198 | 5 | 139 | 472 | 3 | 317 | 8.24e-54 | 184 |
| MS.gene27700.t1 | MTR_2g066050 | 31.675 | 382 | 244 | 6 | 100 | 471 | 48 | 422 | 9.11e-54 | 189 |
| MS.gene27700.t1 | MTR_8g027775 | 33.058 | 363 | 214 | 8 | 120 | 457 | 113 | 471 | 2.02e-53 | 189 |
| MS.gene27700.t1 | MTR_8g027780 | 32.804 | 378 | 224 | 9 | 120 | 472 | 117 | 489 | 2.76e-53 | 189 |
| MS.gene27700.t1 | MTR_7g109720 | 31.092 | 357 | 234 | 6 | 110 | 455 | 233 | 588 | 1.01e-51 | 187 |
| MS.gene27700.t1 | MTR_4g114120 | 28.215 | 521 | 307 | 13 | 4 | 481 | 41 | 537 | 2.25e-51 | 185 |
| MS.gene27700.t1 | MTR_4g112340 | 33.232 | 328 | 208 | 5 | 122 | 438 | 110 | 437 | 1.14e-50 | 182 |
| MS.gene27700.t1 | MTR_1g054630 | 31.492 | 362 | 224 | 8 | 108 | 446 | 153 | 513 | 1.22e-50 | 182 |
| MS.gene27700.t1 | MTR_8g027770 | 33.609 | 363 | 212 | 7 | 120 | 457 | 212 | 570 | 1.91e-50 | 182 |
| MS.gene27700.t1 | MTR_3g467550 | 31.928 | 332 | 208 | 5 | 110 | 424 | 118 | 448 | 4.42e-50 | 177 |
| MS.gene27700.t1 | MTR_1g026830 | 29.471 | 397 | 260 | 7 | 100 | 479 | 139 | 532 | 5.41e-50 | 180 |
| MS.gene27700.t1 | MTR_1g046570 | 29.949 | 394 | 237 | 8 | 124 | 479 | 6 | 398 | 5.44e-50 | 176 |
| MS.gene27700.t1 | MTR_1g095810 | 28.756 | 386 | 258 | 5 | 110 | 479 | 146 | 530 | 6.83e-50 | 179 |
| MS.gene27700.t1 | MTR_3g083690 | 29.620 | 395 | 251 | 8 | 108 | 477 | 144 | 536 | 2.51e-49 | 178 |
| MS.gene27700.t1 | MTR_6g033070 | 31.198 | 359 | 229 | 6 | 110 | 454 | 141 | 495 | 2.95e-47 | 171 |
| MS.gene27700.t1 | MTR_8g097000 | 33.515 | 367 | 215 | 8 | 127 | 472 | 306 | 664 | 5.65e-47 | 174 |
| MS.gene27700.t1 | MTR_6g039840 | 30.263 | 380 | 237 | 7 | 110 | 464 | 111 | 487 | 2.12e-44 | 166 |
| MS.gene27700.t1 | MTR_7g100820 | 30.495 | 364 | 245 | 6 | 119 | 477 | 144 | 504 | 4.64e-44 | 164 |
| MS.gene27700.t1 | MTR_8g027780 | 32.622 | 328 | 192 | 8 | 120 | 422 | 117 | 440 | 2.90e-43 | 159 |
| MS.gene27700.t1 | MTR_5g092560 | 32.822 | 326 | 204 | 6 | 134 | 446 | 101 | 424 | 3.64e-42 | 160 |
| MS.gene27700.t1 | MTR_6g056080 | 30.130 | 385 | 239 | 9 | 108 | 471 | 102 | 477 | 8.25e-41 | 155 |
| MS.gene27700.t1 | MTR_1g102410 | 29.676 | 401 | 236 | 8 | 108 | 471 | 43 | 434 | 1.70e-40 | 154 |
| MS.gene27700.t1 | MTR_3g071620 | 30.000 | 360 | 224 | 7 | 115 | 446 | 22 | 381 | 2.46e-40 | 153 |
| MS.gene27700.t1 | MTR_7g057250 | 25.234 | 428 | 242 | 8 | 100 | 450 | 154 | 580 | 3.33e-39 | 151 |
| MS.gene27700.t1 | MTR_4g068990 | 32.822 | 326 | 203 | 7 | 134 | 446 | 101 | 423 | 4.10e-39 | 151 |
| MS.gene27700.t1 | MTR_4g105100 | 29.375 | 320 | 211 | 5 | 110 | 420 | 208 | 521 | 4.23e-39 | 149 |
| MS.gene27700.t1 | MTR_1g083130 | 28.354 | 395 | 232 | 7 | 110 | 453 | 27 | 421 | 1.34e-37 | 145 |
| MS.gene27700.t1 | MTR_2g063080 | 23.899 | 477 | 279 | 9 | 67 | 464 | 54 | 525 | 1.31e-36 | 142 |
| MS.gene27700.t1 | MTR_6g039840 | 31.353 | 303 | 189 | 6 | 178 | 464 | 12 | 311 | 3.73e-35 | 137 |
| MS.gene27700.t1 | MTR_3g107420 | 35.678 | 199 | 123 | 4 | 110 | 304 | 48 | 245 | 3.31e-33 | 128 |
| MS.gene27700.t1 | MTR_4g059460 | 26.700 | 397 | 211 | 8 | 127 | 443 | 63 | 459 | 7.63e-33 | 132 |
| MS.gene27700.t1 | MTR_2g043360 | 26.196 | 397 | 213 | 8 | 127 | 443 | 60 | 456 | 1.99e-32 | 130 |
| MS.gene27700.t1 | MTR_5g069330 | 26.053 | 380 | 271 | 6 | 110 | 482 | 4 | 380 | 2.03e-31 | 125 |
| MS.gene27700.t1 | MTR_5g069330 | 26.053 | 380 | 271 | 6 | 110 | 482 | 8 | 384 | 2.13e-31 | 125 |
| MS.gene27700.t1 | MTR_4g112320 | 30.315 | 254 | 170 | 4 | 192 | 438 | 2 | 255 | 3.94e-31 | 124 |
| MS.gene27700.t1 | MTR_3g118120 | 29.132 | 357 | 213 | 12 | 119 | 438 | 142 | 495 | 1.56e-30 | 124 |
| MS.gene27700.t1 | MTR_5g077690 | 26.263 | 396 | 223 | 11 | 147 | 473 | 71 | 466 | 6.10e-28 | 116 |
| MS.gene27700.t1 | MTR_4g077370 | 29.694 | 229 | 158 | 1 | 77 | 302 | 218 | 446 | 7.73e-26 | 110 |
| MS.gene27700.t1 | MTR_4g077370 | 30.093 | 216 | 124 | 4 | 110 | 317 | 3 | 199 | 9.66e-18 | 85.9 |
| MS.gene27700.t1 | MTR_8g031340 | 88.462 | 52 | 6 | 0 | 208 | 259 | 1 | 52 | 1.48e-24 | 98.6 |
| MS.gene27700.t1 | MTR_1g022305 | 26.074 | 349 | 189 | 12 | 131 | 474 | 26 | 310 | 4.67e-24 | 105 |
| MS.gene27700.t1 | MTR_4g131750 | 24.297 | 391 | 260 | 10 | 118 | 473 | 91 | 480 | 5.20e-24 | 105 |
| MS.gene27700.t1 | MTR_5g092560 | 32.039 | 206 | 131 | 4 | 250 | 446 | 8 | 213 | 7.05e-24 | 105 |
| MS.gene27700.t1 | MTR_4g068990 | 32.524 | 206 | 129 | 5 | 250 | 446 | 8 | 212 | 8.91e-24 | 104 |
| MS.gene27700.t1 | MTR_0427s0010 | 32.394 | 213 | 105 | 6 | 276 | 471 | 16 | 206 | 5.27e-22 | 94.7 |
| MS.gene27700.t1 | MTR_4g459350 | 31.050 | 219 | 117 | 6 | 127 | 313 | 60 | 276 | 6.09e-21 | 92.8 |
| MS.gene27700.t1 | MTR_2g042440 | 25.691 | 362 | 220 | 11 | 105 | 438 | 15 | 355 | 3.81e-18 | 87.8 |
| MS.gene27700.t1 | MTR_2g042440 | 25.691 | 362 | 220 | 11 | 105 | 438 | 15 | 355 | 4.05e-18 | 87.8 |
| MS.gene27700.t1 | MTR_8g032230 | 34.677 | 124 | 79 | 2 | 118 | 239 | 18 | 141 | 1.52e-17 | 80.5 |
| MS.gene27700.t1 | MTR_8g062720 | 34.109 | 129 | 78 | 3 | 345 | 469 | 435 | 560 | 1.54e-14 | 76.6 |
| MS.gene27700.t1 | MTR_2g088350 | 86.486 | 37 | 5 | 0 | 403 | 439 | 144 | 180 | 3.50e-13 | 68.6 |
| MS.gene27700.t1 | MTR_2g006440 | 24.346 | 382 | 244 | 12 | 92 | 453 | 380 | 736 | 4.08e-13 | 72.4 |
| MS.gene27700.t1 | MTR_1g009617 | 31.481 | 108 | 71 | 2 | 368 | 474 | 167 | 272 | 1.77e-12 | 69.3 |
| MS.gene27700.t1 | MTR_8g018330 | 27.329 | 161 | 105 | 4 | 319 | 472 | 15 | 170 | 1.97e-12 | 65.9 |
| MS.gene27700.t1 | MTR_1g023070 | 29.907 | 107 | 72 | 2 | 369 | 474 | 27 | 131 | 3.50e-12 | 65.5 |
| MS.gene27700.t1 | MTR_1g023070 | 29.907 | 107 | 72 | 2 | 369 | 474 | 27 | 131 | 8.61e-12 | 64.7 |
| MS.gene27700.t1 | MTR_8g018350 | 26.543 | 162 | 104 | 5 | 319 | 472 | 15 | 169 | 2.26e-11 | 62.8 |
| MS.gene27700.t1 | MTR_8g079462 | 24.621 | 264 | 154 | 7 | 255 | 473 | 19 | 282 | 3.03e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27700.t1 | AT4G00660 | 79.883 | 512 | 61 | 4 | 5 | 482 | 2 | 505 | 0.0 | 823 |
| MS.gene27700.t1 | AT4G00660 | 79.883 | 512 | 61 | 4 | 5 | 482 | 2 | 505 | 0.0 | 823 |
| MS.gene27700.t1 | AT2G45810 | 73.805 | 523 | 88 | 6 | 7 | 482 | 8 | 528 | 0.0 | 762 |
| MS.gene27700.t1 | AT3G61240 | 75.301 | 498 | 103 | 3 | 4 | 482 | 2 | 498 | 0.0 | 755 |
| MS.gene27700.t1 | AT3G61240 | 75.301 | 498 | 103 | 3 | 4 | 482 | 2 | 498 | 0.0 | 755 |
| MS.gene27700.t1 | AT3G19760 | 39.452 | 365 | 219 | 2 | 110 | 472 | 37 | 401 | 6.97e-95 | 293 |
| MS.gene27700.t1 | AT1G51380 | 38.133 | 375 | 226 | 3 | 104 | 472 | 14 | 388 | 2.36e-91 | 283 |
| MS.gene27700.t1 | AT3G13920 | 41.096 | 365 | 213 | 2 | 110 | 472 | 41 | 405 | 5.46e-91 | 283 |
| MS.gene27700.t1 | AT3G13920 | 41.096 | 365 | 213 | 2 | 110 | 472 | 31 | 395 | 7.96e-91 | 282 |
| MS.gene27700.t1 | AT1G72730 | 40.327 | 367 | 217 | 2 | 108 | 472 | 41 | 407 | 6.36e-90 | 280 |
| MS.gene27700.t1 | AT1G54270 | 40.984 | 366 | 212 | 4 | 110 | 472 | 41 | 405 | 6.04e-89 | 278 |
| MS.gene27700.t1 | AT3G13920 | 42.486 | 346 | 197 | 2 | 110 | 453 | 41 | 386 | 9.61e-89 | 278 |
| MS.gene27700.t1 | AT3G13920 | 42.486 | 346 | 197 | 2 | 110 | 453 | 45 | 390 | 1.42e-88 | 277 |
| MS.gene27700.t1 | AT3G13920 | 40.896 | 357 | 206 | 3 | 121 | 472 | 44 | 400 | 6.78e-88 | 275 |
| MS.gene27700.t1 | AT1G54270 | 40.782 | 358 | 205 | 5 | 121 | 472 | 44 | 400 | 8.77e-86 | 270 |
| MS.gene27700.t1 | AT5G11170 | 36.725 | 403 | 243 | 7 | 89 | 480 | 23 | 424 | 2.11e-81 | 259 |
| MS.gene27700.t1 | AT5G11200 | 36.725 | 403 | 243 | 7 | 89 | 480 | 23 | 424 | 2.11e-81 | 259 |
| MS.gene27700.t1 | AT5G11200 | 34.685 | 444 | 237 | 10 | 89 | 480 | 23 | 465 | 8.96e-74 | 240 |
| MS.gene27700.t1 | AT5G11200 | 33.333 | 462 | 237 | 10 | 89 | 480 | 23 | 483 | 6.73e-71 | 233 |
| MS.gene27700.t1 | AT5G11170 | 36.657 | 341 | 208 | 6 | 147 | 480 | 2 | 341 | 3.48e-67 | 219 |
| MS.gene27700.t1 | AT5G60990 | 33.073 | 384 | 243 | 4 | 110 | 479 | 11 | 394 | 4.39e-66 | 220 |
| MS.gene27700.t1 | AT5G63120 | 32.587 | 402 | 248 | 8 | 97 | 479 | 147 | 544 | 2.24e-63 | 216 |
| MS.gene27700.t1 | AT5G14610 | 33.673 | 392 | 245 | 7 | 98 | 475 | 145 | 535 | 2.27e-63 | 217 |
| MS.gene27700.t1 | AT5G14610 | 33.673 | 392 | 245 | 7 | 98 | 475 | 145 | 535 | 2.42e-63 | 217 |
| MS.gene27700.t1 | AT5G14610 | 33.846 | 390 | 243 | 7 | 98 | 473 | 153 | 541 | 2.93e-63 | 217 |
| MS.gene27700.t1 | AT2G33730 | 31.538 | 390 | 241 | 4 | 110 | 473 | 315 | 704 | 2.31e-62 | 216 |
| MS.gene27700.t1 | AT3G22310 | 32.796 | 372 | 235 | 6 | 112 | 472 | 120 | 487 | 1.34e-61 | 211 |
| MS.gene27700.t1 | AT3G06480 | 33.503 | 394 | 246 | 6 | 97 | 475 | 417 | 809 | 1.67e-61 | 217 |
| MS.gene27700.t1 | AT3G22310 | 32.796 | 372 | 235 | 6 | 112 | 472 | 120 | 487 | 1.76e-61 | 211 |
| MS.gene27700.t1 | AT3G01540 | 32.653 | 392 | 249 | 7 | 98 | 475 | 142 | 532 | 3.07e-61 | 211 |
| MS.gene27700.t1 | AT3G01540 | 32.653 | 392 | 249 | 7 | 98 | 475 | 142 | 532 | 3.07e-61 | 211 |
| MS.gene27700.t1 | AT3G01540 | 32.653 | 392 | 249 | 7 | 98 | 475 | 142 | 532 | 3.07e-61 | 211 |
| MS.gene27700.t1 | AT3G01540 | 32.653 | 392 | 249 | 7 | 98 | 475 | 142 | 532 | 3.41e-61 | 211 |
| MS.gene27700.t1 | AT5G14610 | 34.262 | 359 | 227 | 6 | 123 | 473 | 45 | 402 | 1.12e-60 | 207 |
| MS.gene27700.t1 | AT5G14610 | 34.262 | 359 | 227 | 6 | 123 | 473 | 45 | 402 | 1.12e-60 | 207 |
| MS.gene27700.t1 | AT1G16280 | 32.242 | 397 | 248 | 6 | 91 | 479 | 50 | 433 | 1.55e-60 | 206 |
| MS.gene27700.t1 | AT1G55150 | 31.351 | 370 | 238 | 6 | 110 | 468 | 106 | 470 | 2.81e-60 | 206 |
| MS.gene27700.t1 | AT3G22330 | 31.421 | 366 | 236 | 6 | 118 | 472 | 114 | 475 | 3.08e-60 | 208 |
| MS.gene27700.t1 | AT1G55150 | 31.351 | 370 | 238 | 6 | 110 | 468 | 131 | 495 | 1.07e-59 | 205 |
| MS.gene27700.t1 | AT5G14610 | 34.262 | 359 | 227 | 6 | 123 | 473 | 244 | 601 | 1.43e-59 | 208 |
| MS.gene27700.t1 | AT1G31970 | 35.174 | 344 | 200 | 5 | 126 | 450 | 132 | 471 | 1.98e-58 | 202 |
| MS.gene27700.t1 | AT1G77030 | 35.278 | 360 | 207 | 7 | 110 | 453 | 30 | 379 | 1.12e-55 | 199 |
| MS.gene27700.t1 | AT1G51380 | 37.931 | 261 | 156 | 3 | 105 | 359 | 15 | 275 | 1.79e-55 | 187 |
| MS.gene27700.t1 | AT1G28180 | 31.214 | 346 | 226 | 5 | 138 | 473 | 3 | 346 | 1.89e-55 | 189 |
| MS.gene27700.t1 | AT4G16630 | 32.990 | 388 | 238 | 7 | 97 | 469 | 156 | 536 | 8.13e-55 | 196 |
| MS.gene27700.t1 | AT1G20920 | 31.714 | 350 | 227 | 5 | 115 | 453 | 198 | 546 | 1.37e-54 | 196 |
| MS.gene27700.t1 | AT3G53110 | 32.170 | 401 | 251 | 10 | 101 | 480 | 84 | 484 | 1.74e-54 | 190 |
| MS.gene27700.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 128 | 453 | 549 | 884 | 2.30e-54 | 197 |
| MS.gene27700.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 128 | 453 | 549 | 884 | 2.30e-54 | 197 |
| MS.gene27700.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 128 | 453 | 549 | 884 | 2.30e-54 | 197 |
| MS.gene27700.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 128 | 453 | 549 | 884 | 2.30e-54 | 197 |
| MS.gene27700.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 128 | 453 | 549 | 884 | 2.30e-54 | 197 |
| MS.gene27700.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 128 | 453 | 549 | 884 | 2.30e-54 | 197 |
| MS.gene27700.t1 | AT5G26742 | 32.134 | 389 | 245 | 6 | 101 | 473 | 93 | 478 | 4.51e-54 | 194 |
| MS.gene27700.t1 | AT5G26742 | 32.134 | 389 | 245 | 6 | 101 | 473 | 93 | 478 | 4.56e-54 | 194 |
| MS.gene27700.t1 | AT5G08610 | 33.002 | 403 | 247 | 9 | 98 | 479 | 373 | 773 | 6.74e-54 | 194 |
| MS.gene27700.t1 | AT3G18600 | 35.380 | 342 | 203 | 8 | 110 | 438 | 91 | 427 | 1.41e-53 | 189 |
| MS.gene27700.t1 | AT3G58570 | 33.149 | 362 | 218 | 7 | 108 | 446 | 146 | 506 | 1.73e-53 | 191 |
| MS.gene27700.t1 | AT5G63630 | 34.026 | 385 | 231 | 9 | 93 | 455 | 40 | 423 | 5.43e-53 | 187 |
| MS.gene27700.t1 | AT5G26742 | 33.237 | 346 | 214 | 5 | 142 | 473 | 43 | 385 | 1.16e-52 | 188 |
| MS.gene27700.t1 | AT5G08620 | 32.536 | 418 | 254 | 10 | 88 | 479 | 56 | 471 | 1.18e-52 | 187 |
| MS.gene27700.t1 | AT5G63630 | 34.026 | 385 | 231 | 9 | 93 | 455 | 234 | 617 | 5.36e-52 | 187 |
| MS.gene27700.t1 | AT3G58510 | 31.282 | 390 | 244 | 9 | 108 | 475 | 151 | 538 | 2.65e-51 | 184 |
| MS.gene27700.t1 | AT3G58510 | 31.282 | 390 | 244 | 9 | 108 | 475 | 151 | 538 | 2.65e-51 | 184 |
| MS.gene27700.t1 | AT3G58510 | 31.282 | 390 | 244 | 9 | 108 | 475 | 151 | 538 | 2.65e-51 | 184 |
| MS.gene27700.t1 | AT5G65900 | 34.320 | 338 | 213 | 4 | 110 | 438 | 156 | 493 | 3.43e-51 | 184 |
| MS.gene27700.t1 | AT3G02065 | 33.149 | 362 | 226 | 8 | 110 | 458 | 112 | 470 | 3.67e-51 | 181 |
| MS.gene27700.t1 | AT3G02065 | 33.149 | 362 | 226 | 8 | 110 | 458 | 112 | 470 | 3.67e-51 | 181 |
| MS.gene27700.t1 | AT2G42520 | 31.633 | 392 | 242 | 10 | 108 | 475 | 159 | 548 | 9.02e-51 | 183 |
| MS.gene27700.t1 | AT2G42520 | 31.633 | 392 | 242 | 10 | 108 | 475 | 159 | 548 | 9.02e-51 | 183 |
| MS.gene27700.t1 | AT2G42520 | 31.633 | 392 | 242 | 10 | 108 | 475 | 159 | 548 | 9.02e-51 | 183 |
| MS.gene27700.t1 | AT5G51280 | 27.193 | 456 | 301 | 8 | 51 | 477 | 77 | 530 | 5.03e-49 | 177 |
| MS.gene27700.t1 | AT2G47330 | 31.092 | 357 | 234 | 7 | 110 | 455 | 230 | 585 | 6.63e-49 | 179 |
| MS.gene27700.t1 | AT4G33370 | 27.739 | 429 | 280 | 7 | 77 | 477 | 55 | 481 | 8.03e-49 | 176 |
| MS.gene27700.t1 | AT5G14610 | 32.659 | 346 | 218 | 7 | 98 | 429 | 153 | 497 | 8.85e-49 | 175 |
| MS.gene27700.t1 | AT3G06480 | 32.344 | 337 | 212 | 6 | 97 | 418 | 417 | 752 | 1.30e-46 | 173 |
| MS.gene27700.t1 | AT3G02065 | 33.134 | 335 | 208 | 8 | 137 | 458 | 2 | 333 | 1.59e-46 | 166 |
| MS.gene27700.t1 | AT5G63120 | 31.915 | 329 | 207 | 5 | 97 | 409 | 147 | 474 | 2.34e-46 | 168 |
| MS.gene27700.t1 | AT5G63120 | 31.915 | 329 | 207 | 5 | 97 | 409 | 147 | 474 | 2.34e-46 | 168 |
| MS.gene27700.t1 | AT5G63120 | 31.915 | 329 | 207 | 5 | 97 | 409 | 147 | 474 | 2.34e-46 | 168 |
| MS.gene27700.t1 | AT5G63120 | 31.915 | 329 | 207 | 5 | 97 | 409 | 147 | 474 | 2.55e-46 | 168 |
| MS.gene27700.t1 | AT3G09620 | 31.250 | 336 | 192 | 8 | 128 | 453 | 417 | 723 | 1.07e-45 | 171 |
| MS.gene27700.t1 | AT3G09620 | 31.250 | 336 | 192 | 8 | 128 | 453 | 416 | 722 | 1.39e-45 | 171 |
| MS.gene27700.t1 | AT3G09720 | 31.215 | 362 | 241 | 6 | 119 | 475 | 152 | 510 | 4.38e-43 | 160 |
| MS.gene27700.t1 | AT3G09720 | 31.215 | 362 | 241 | 6 | 119 | 475 | 152 | 510 | 4.38e-43 | 160 |
| MS.gene27700.t1 | AT4G09730 | 29.211 | 380 | 241 | 8 | 110 | 464 | 114 | 490 | 7.75e-43 | 160 |
| MS.gene27700.t1 | AT1G63250 | 31.877 | 389 | 233 | 9 | 107 | 472 | 327 | 706 | 9.74e-43 | 162 |
| MS.gene27700.t1 | AT1G51380 | 34.274 | 248 | 146 | 5 | 105 | 340 | 15 | 257 | 8.62e-42 | 151 |
| MS.gene27700.t1 | AT5G54910 | 32.692 | 364 | 226 | 10 | 122 | 471 | 85 | 443 | 8.74e-42 | 159 |
| MS.gene27700.t1 | AT2G07750 | 31.877 | 389 | 233 | 9 | 107 | 472 | 374 | 753 | 9.35e-42 | 159 |
| MS.gene27700.t1 | AT1G51380 | 34.274 | 248 | 146 | 5 | 105 | 340 | 15 | 257 | 1.09e-41 | 151 |
| MS.gene27700.t1 | AT1G12770 | 25.917 | 436 | 251 | 9 | 107 | 481 | 109 | 533 | 3.18e-41 | 155 |
| MS.gene27700.t1 | AT1G12770 | 25.917 | 436 | 251 | 9 | 107 | 481 | 109 | 533 | 3.18e-41 | 155 |
| MS.gene27700.t1 | AT1G71370 | 30.595 | 353 | 219 | 8 | 115 | 446 | 23 | 370 | 6.76e-41 | 154 |
| MS.gene27700.t1 | AT5G62190 | 29.899 | 398 | 241 | 10 | 99 | 471 | 87 | 471 | 1.39e-39 | 152 |
| MS.gene27700.t1 | AT5G05450 | 28.852 | 357 | 229 | 7 | 115 | 446 | 23 | 379 | 1.34e-38 | 148 |
| MS.gene27700.t1 | AT3G06980 | 26.959 | 434 | 266 | 14 | 45 | 438 | 315 | 737 | 1.76e-34 | 137 |
| MS.gene27700.t1 | AT3G16840 | 24.537 | 432 | 249 | 8 | 119 | 474 | 201 | 631 | 2.92e-34 | 137 |
| MS.gene27700.t1 | AT3G16840 | 24.537 | 432 | 249 | 8 | 119 | 474 | 202 | 632 | 3.30e-34 | 137 |
| MS.gene27700.t1 | AT4G34910 | 28.052 | 385 | 218 | 8 | 110 | 438 | 48 | 429 | 2.45e-33 | 133 |
| MS.gene27700.t1 | AT2G40700 | 26.058 | 449 | 242 | 12 | 87 | 446 | 4 | 451 | 7.28e-33 | 132 |
| MS.gene27700.t1 | AT1G71280 | 29.836 | 305 | 186 | 7 | 115 | 411 | 24 | 308 | 1.19e-29 | 119 |
| MS.gene27700.t1 | AT1G71280 | 29.545 | 308 | 189 | 7 | 115 | 414 | 24 | 311 | 1.86e-29 | 120 |
| MS.gene27700.t1 | AT5G19210 | 27.225 | 382 | 247 | 7 | 114 | 464 | 82 | 463 | 2.65e-29 | 120 |
| MS.gene27700.t1 | AT4G15850 | 25.248 | 404 | 217 | 14 | 147 | 473 | 74 | 469 | 7.15e-24 | 105 |
| MS.gene27700.t1 | AT4G35740 | 26.748 | 329 | 196 | 10 | 135 | 438 | 41 | 349 | 1.62e-14 | 76.6 |
| MS.gene27700.t1 | AT1G59990 | 33.945 | 109 | 69 | 2 | 347 | 454 | 426 | 532 | 2.27e-13 | 72.8 |
| MS.gene27700.t1 | AT1G59990 | 33.945 | 109 | 69 | 2 | 347 | 454 | 426 | 532 | 2.47e-13 | 72.8 |
| MS.gene27700.t1 | AT1G28180 | 30.702 | 114 | 71 | 2 | 138 | 243 | 3 | 116 | 2.53e-13 | 67.0 |
Find 123 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACGCATAATGTCATCTTTC+AGG | 0.227927 | 7.3:-29342610 | None:intergenic |
| TTGAAGTCCTTTACAGTAAC+AGG | 0.265203 | 7.3:-29343178 | None:intergenic |
| AGCATTCCAATTGCCCTTAC+TGG | 0.269182 | 7.3:+29340976 | MS.gene27700:CDS |
| TTCAAGTTGTTCGCATTGTT+CGG | 0.277226 | 7.3:-29338557 | None:intergenic |
| CAATTGGAATGCTTTCTTCT+TGG | 0.291211 | 7.3:-29340966 | None:intergenic |
| GTTGGTCGATCCGGAAGGTT+TGG | 0.291500 | 7.3:+29344079 | MS.gene27700:CDS |
| TCTATTGAAGGCTTGAACTC+TGG | 0.317516 | 7.3:-29343097 | None:intergenic |
| CAGATATGTTTCTGAGTTCT+TGG | 0.318609 | 7.3:-29343969 | None:intergenic |
| AATATTGTGTAATACCCTTC+AGG | 0.328307 | 7.3:-29343252 | None:intergenic |
| GCAAGATCCAATATTCTTCC+TGG | 0.337628 | 7.3:-29342665 | None:intergenic |
| TCCATAAGGTTAATGATATA+CGG | 0.345859 | 7.3:-29343220 | None:intergenic |
| GCCGTATATCATTAACCTTA+TGG | 0.349321 | 7.3:+29343219 | MS.gene27700:CDS |
| TTTGAAGCGTGAGCTGCTAA+TGG | 0.357889 | 7.3:+29340906 | MS.gene27700:CDS |
| ACTGGTTCCAACACGAGAAT+TGG | 0.362399 | 7.3:+29342508 | MS.gene27700:CDS |
| TCAAGTTGTTCGCATTGTTC+GGG | 0.365127 | 7.3:-29338556 | None:intergenic |
| ATGAACAATAACAACAATAG+AGG | 0.369188 | 7.3:+29338467 | MS.gene27700:CDS |
| ACCAAGGTGCCCAAACCTTC+CGG | 0.382733 | 7.3:-29344089 | None:intergenic |
| ATGTGATGCAGTTGTTATAC+TGG | 0.387213 | 7.3:+29342490 | MS.gene27700:intron |
| CAGATTGAAGCGATCCTCAT+AGG | 0.387789 | 7.3:-29344131 | None:intergenic |
| ATCGATTATCTTCTGCAATT+CGG | 0.395509 | 7.3:+29343428 | MS.gene27700:CDS |
| TGGTACTCCAGGAAGAATAT+TGG | 0.406555 | 7.3:+29342658 | MS.gene27700:CDS |
| CCTTGGTTTAGCAGTGAACT+TGG | 0.408298 | 7.3:+29344105 | MS.gene27700:CDS |
| GCATTTACAAATTCAAGTTA+TGG | 0.408398 | 7.3:+29342568 | MS.gene27700:CDS |
| TTGGTCGATCCGGAAGGTTT+GGG | 0.418783 | 7.3:+29344080 | MS.gene27700:CDS |
| TTGAAGCGTGAGCTGCTAAT+GGG | 0.420240 | 7.3:+29340907 | MS.gene27700:CDS |
| CAACCTGTTCATCTGCTTGT+TGG | 0.422581 | 7.3:+29342638 | MS.gene27700:CDS |
| GAAATGTAGCTGAAAACAAT+AGG | 0.425303 | 7.3:-29343156 | None:intergenic |
| GGGAGATATCCACCTGGGAT+TGG | 0.425453 | 7.3:+29338488 | MS.gene27700:CDS |
| TCACTGCCAGTAAGGGCAAT+TGG | 0.428644 | 7.3:-29340982 | None:intergenic |
| TGCATTTAGCATTCCTGCAT+TGG | 0.429066 | 7.3:+29341044 | MS.gene27700:CDS |
| GGAGATATCCACCTGGGATT+GGG | 0.432715 | 7.3:+29338489 | MS.gene27700:CDS |
| CATCTGCTTGTTGGTACTCC+AGG | 0.432866 | 7.3:+29342647 | MS.gene27700:CDS |
| CTGAAAACAATAGGATTTGA+CGG | 0.434306 | 7.3:-29343147 | None:intergenic |
| AATATTGGATCTTGCAAAGA+AGG | 0.436611 | 7.3:+29342673 | MS.gene27700:CDS |
| TGAATCAGCTGCTCTATTGA+AGG | 0.436678 | 7.3:-29343109 | None:intergenic |
| CTATTGAAGGCTTGAACTCT+GGG | 0.438992 | 7.3:-29343096 | None:intergenic |
| TAATAACAACATTCACTGCT+TGG | 0.441559 | 7.3:-29343934 | None:intergenic |
| AGATATGTTTCTGAGTTCTT+GGG | 0.444541 | 7.3:-29343968 | None:intergenic |
| GAATGCTTTCTTCTTGGATA+GGG | 0.449165 | 7.3:-29340960 | None:intergenic |
| CTGGCAGTGACATTCTTGCT+AGG | 0.452575 | 7.3:+29340995 | MS.gene27700:CDS |
| CCAGGACGTGACAGCAACTA+AGG | 0.455382 | 7.3:+29340861 | MS.gene27700:intron |
| GGAATGCTTTCTTCTTGGAT+AGG | 0.455771 | 7.3:-29340961 | None:intergenic |
| TATCCACCTGGGATTGGGTT+AGG | 0.456406 | 7.3:+29338494 | MS.gene27700:CDS |
| GCTAAGAAAATCACAGAACT+AGG | 0.459240 | 7.3:+29343471 | MS.gene27700:CDS |
| AATAGGATTTGACGGTTTGA+AGG | 0.459295 | 7.3:-29343139 | None:intergenic |
| CAAGGTAGTGGTAGTGGTGG+TGG | 0.460509 | 7.3:+29338521 | MS.gene27700:CDS |
| CAGCTGCTGATACACGCTAT+AGG | 0.470856 | 7.3:+29339569 | MS.gene27700:CDS |
| CAAGAATGTCACTGCCAGTA+AGG | 0.471837 | 7.3:-29340990 | None:intergenic |
| GTACCAACAAGCAGATGAAC+AGG | 0.475879 | 7.3:-29342641 | None:intergenic |
| GGAGGACAAGGTAGTGGTAG+TGG | 0.480242 | 7.3:+29338515 | MS.gene27700:CDS |
| TACATTTCCTGTTACTGTAA+AGG | 0.480320 | 7.3:+29343171 | MS.gene27700:CDS |
| ATTCAAGTTATGGTCACAAC+AGG | 0.487922 | 7.3:+29342578 | MS.gene27700:CDS |
| TGTCAGTACCACCACCCAAC+TGG | 0.488235 | 7.3:-29338754 | None:intergenic |
| GATATGCAGGTTGGTCGATC+CGG | 0.494215 | 7.3:+29344070 | MS.gene27700:intron |
| TCTCAAGTGTGTAAAGAGCT+TGG | 0.494662 | 7.3:+29342542 | MS.gene27700:CDS |
| AACTAAGGGAAATGAGTTTG+AGG | 0.503108 | 7.3:+29340876 | MS.gene27700:CDS |
| ATATTGTGTAATACCCTTCA+GGG | 0.503780 | 7.3:-29343251 | None:intergenic |
| TCAGGGTAAGCTCATCCATA+AGG | 0.509101 | 7.3:-29343234 | None:intergenic |
| TGCAGAGCCAATTCTCGTGT+TGG | 0.509116 | 7.3:-29342515 | None:intergenic |
| TCCGGAAGGTTTGGGCACCT+TGG | 0.512019 | 7.3:+29344088 | MS.gene27700:CDS |
| TGCAGGAATCTCGTTTGTAC+TGG | 0.512233 | 7.3:+29343573 | MS.gene27700:CDS |
| TGTTGTTGTTGTTGATAATG+TGG | 0.517561 | 7.3:-29338599 | None:intergenic |
| TACACAATATTATGCATTCG+TGG | 0.520210 | 7.3:+29343264 | MS.gene27700:CDS |
| AGTCATGGAAAACTCTATTA+CGG | 0.522164 | 7.3:-29343536 | None:intergenic |
| TTGACCAGGCTATATATTGT+CGG | 0.523937 | 7.3:+29344473 | MS.gene27700:CDS |
| ACTCAGAAACATATCTGCAC+AGG | 0.526402 | 7.3:+29343975 | MS.gene27700:CDS |
| CTGAGGAGGAACCAGTTGGG+TGG | 0.527919 | 7.3:+29338743 | MS.gene27700:intron |
| TATATAGCCTGGTCAATGAA+TGG | 0.528302 | 7.3:-29344466 | None:intergenic |
| CTTTCTTCTTGGATAGGGGA+AGG | 0.528864 | 7.3:-29340955 | None:intergenic |
| AATGCGAACAACTTGAACAC+CGG | 0.529192 | 7.3:+29338563 | MS.gene27700:CDS |
| TATATGAGAAGGGGTTTGAA+AGG | 0.529351 | 7.3:+29340932 | MS.gene27700:CDS |
| CTATAGCGTGTATCAGCAGC+TGG | 0.530834 | 7.3:-29339568 | None:intergenic |
| TGTTAGTTCACAAGATTGGA+AGG | 0.533480 | 7.3:+29339531 | MS.gene27700:intron |
| GGGTTAGGAGGACAAGGTAG+TGG | 0.542300 | 7.3:+29338509 | MS.gene27700:CDS |
| AAGAATGTCACTGCCAGTAA+GGG | 0.548067 | 7.3:-29340989 | None:intergenic |
| TGGCAGTGACATTCTTGCTA+GGG | 0.556476 | 7.3:+29340996 | MS.gene27700:CDS |
| AGTGAACTTGGTAACCTATG+AGG | 0.556563 | 7.3:+29344117 | MS.gene27700:CDS |
| CTAAGAAAATCACAGAACTA+GGG | 0.563108 | 7.3:+29343472 | MS.gene27700:CDS |
| TGGCTGAGGAGGAACCAGTT+GGG | 0.564082 | 7.3:+29338740 | MS.gene27700:intron |
| CATAATGTCATCTTTCAGGC+TGG | 0.564266 | 7.3:-29342606 | None:intergenic |
| ATGCGAACAACTTGAACACC+GGG | 0.564269 | 7.3:+29338564 | MS.gene27700:CDS |
| AATTGCAGAAGATAATCGAT+TGG | 0.567529 | 7.3:-29343425 | None:intergenic |
| ACTTCCGCAATGGTGCATGC+AGG | 0.570720 | 7.3:+29343556 | MS.gene27700:CDS |
| CTAATGGGAATATATGAGAA+GGG | 0.572054 | 7.3:+29340922 | MS.gene27700:CDS |
| AGGAGGAACCAGTTGGGTGG+TGG | 0.572405 | 7.3:+29338746 | MS.gene27700:intron |
| TTCTATGCTTGTCATGGATG+AGG | 0.575458 | 7.3:+29342718 | MS.gene27700:CDS |
| GGACAAGGTAGTGGTAGTGG+TGG | 0.582679 | 7.3:+29338518 | MS.gene27700:CDS |
| TATAGGATTGAACAAGAACT+TGG | 0.583465 | 7.3:+29344421 | MS.gene27700:CDS |
| ATCACCGACAATATATAGCC+TGG | 0.584273 | 7.3:-29344477 | None:intergenic |
| GCTAATGGGAATATATGAGA+AGG | 0.585242 | 7.3:+29340921 | MS.gene27700:CDS |
| AATTCCGCCATTCATTGACC+AGG | 0.586353 | 7.3:+29344459 | MS.gene27700:CDS |
| AGATTGTTCTATGCTTGTCA+TGG | 0.591666 | 7.3:+29342712 | MS.gene27700:CDS |
| ATGGATGAGCTTACCCTGAA+GGG | 0.593014 | 7.3:+29343238 | MS.gene27700:CDS |
| ATGCACCATTGCGGAAGTCA+TGG | 0.593776 | 7.3:-29343551 | None:intergenic |
| AATGCTTTCTTCTTGGATAG+GGG | 0.593841 | 7.3:-29340959 | None:intergenic |
| CCACCTGGGATTGGGTTAGG+AGG | 0.595029 | 7.3:+29338497 | MS.gene27700:CDS |
| TGAACAATAACAACAATAGA+GGG | 0.597505 | 7.3:+29338468 | MS.gene27700:CDS |
| GTGGCTGAGGAGGAACCAGT+TGG | 0.607435 | 7.3:+29338739 | MS.gene27700:intron |
| TATGGATGAGCTTACCCTGA+AGG | 0.609955 | 7.3:+29343237 | MS.gene27700:CDS |
| TGCAGGTTGGTCGATCCGGA+AGG | 0.610814 | 7.3:+29344074 | MS.gene27700:intron |
| AGTCTGAAACAAATGACCCT+AGG | 0.611339 | 7.3:+29338810 | MS.gene27700:CDS |
| TGTCCTCCTAACCCAATCCC+AGG | 0.613832 | 7.3:-29338500 | None:intergenic |
| ATTATGCATTCGTGGAGGAG+AGG | 0.617509 | 7.3:+29343272 | MS.gene27700:CDS |
| CAAGTTATGGTCACAACAGG+TGG | 0.624109 | 7.3:+29342581 | MS.gene27700:CDS |
| ATATTGGATCTTGCAAAGAA+GGG | 0.629948 | 7.3:+29342674 | MS.gene27700:CDS |
| CTCAGAAACATATCTGCACA+GGG | 0.632923 | 7.3:+29343976 | MS.gene27700:CDS |
| CAGGACGTGACAGCAACTAA+GGG | 0.635435 | 7.3:+29340862 | MS.gene27700:intron |
| CATGGAAAACTCTATTACGG+TGG | 0.637092 | 7.3:-29343533 | None:intergenic |
| TACTGACACCAACGTTGTCG+AGG | 0.637320 | 7.3:+29338769 | MS.gene27700:CDS |
| CTCAACCTCCTCGACAACGT+TGG | 0.651884 | 7.3:-29338777 | None:intergenic |
| GGGATTGGGTTAGGAGGACA+AGG | 0.654618 | 7.3:+29338503 | MS.gene27700:CDS |
| TAATGGGAATATATGAGAAG+GGG | 0.656333 | 7.3:+29340923 | MS.gene27700:CDS |
| ATGTGGTCTCTGTTGAAACC+CGG | 0.657661 | 7.3:-29338582 | None:intergenic |
| TGACACCAACGTTGTCGAGG+AGG | 0.662571 | 7.3:+29338772 | MS.gene27700:CDS |
| CCTCCTAACCCAATCCCAGG+TGG | 0.674073 | 7.3:-29338497 | None:intergenic |
| GATTCCTGCATGCACCATTG+CGG | 0.682050 | 7.3:-29343560 | None:intergenic |
| CCAAGTTCACTGCTAAACCA+AGG | 0.700064 | 7.3:-29344105 | None:intergenic |
| ACAATATTATGCATTCGTGG+AGG | 0.702238 | 7.3:+29343267 | MS.gene27700:CDS |
| AATAGAGGGAGATATCCACC+TGG | 0.706705 | 7.3:+29338482 | MS.gene27700:CDS |
| ATAGCCTGGTCAATGAATGG+CGG | 0.708720 | 7.3:-29344463 | None:intergenic |
| TATTGAAGGCTTGAACTCTG+GGG | 0.717707 | 7.3:-29343095 | None:intergenic |
| ATAGAGGGAGATATCCACCT+GGG | 0.719697 | 7.3:+29338483 | MS.gene27700:CDS |
| TGATACACGCTATAGGACAG+AGG | 0.742745 | 7.3:+29339576 | MS.gene27700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAATTAAATTATATGA+GGG | - | chr7.3:29341609-29341628 | None:intergenic | 10.0% |
| !! | TACAAAAATTAAATTATATG+AGG | - | chr7.3:29341610-29341629 | None:intergenic | 10.0% |
| !!! | TACTTTGAATTTTTTATTAA+AGG | - | chr7.3:29344231-29344250 | None:intergenic | 10.0% |
| !! | AAAATAAAAAGAAAGCAAAA+CGG | - | chr7.3:29339998-29340017 | None:intergenic | 15.0% |
| !! | CAAAAATTAAATTATATGAG+GGG | - | chr7.3:29341608-29341627 | None:intergenic | 15.0% |
| !! | CAAGATAAAAATATTATTCA+AGG | + | chr7.3:29341078-29341097 | MS.gene27700:CDS | 15.0% |
| !! | CTTGGATTATATATATATAA+AGG | - | chr7.3:29339631-29339650 | None:intergenic | 15.0% |
| !! | GTAGCATATATTATATTTAT+AGG | + | chr7.3:29343774-29343793 | MS.gene27700:intron | 15.0% |
| !! | TAAGAACAAAAAACAATTAA+TGG | - | chr7.3:29341823-29341842 | None:intergenic | 15.0% |
| !! | TATTAAAAATGAAAAATCTC+AGG | - | chr7.3:29341372-29341391 | None:intergenic | 15.0% |
| !!! | AATAAAATGGAATTTGTTAA+AGG | + | chr7.3:29341236-29341255 | MS.gene27700:intron | 15.0% |
| !!! | AATAAATTTTTGTATGTTTG+TGG | + | chr7.3:29339159-29339178 | MS.gene27700:intron | 15.0% |
| !!! | ATAAAATGGAATTTGTTAAA+GGG | + | chr7.3:29341237-29341256 | MS.gene27700:intron | 15.0% |
| !!! | ATTTTAAATAAACAATCACT+TGG | - | chr7.3:29340385-29340404 | None:intergenic | 15.0% |
| !!! | TTTATTTTTGGTGTTTTTTT+GGG | + | chr7.3:29340010-29340029 | MS.gene27700:intron | 15.0% |
| !!! | TTTTATTTTTGGTGTTTTTT+TGG | + | chr7.3:29340009-29340028 | MS.gene27700:intron | 15.0% |
| !!! | TTTTGCTTTCTTTTTATTTT+TGG | + | chr7.3:29339998-29340017 | MS.gene27700:intron | 15.0% |
| !! | AAAAAAATACAATACTCAGT+CGG | - | chr7.3:29341902-29341921 | None:intergenic | 20.0% |
| !! | AAAATCCTTCATAAGAATAT+AGG | - | chr7.3:29339295-29339314 | None:intergenic | 20.0% |
| !! | AATCAAATTATTAGTCATGA+AGG | + | chr7.3:29341639-29341658 | MS.gene27700:intron | 20.0% |
| !! | AATGAAATTATTAAACTAGC+TGG | - | chr7.3:29341268-29341287 | None:intergenic | 20.0% |
| !! | AATTCAAAGTAGATATTGTA+CGG | + | chr7.3:29344240-29344259 | MS.gene27700:intron | 20.0% |
| !! | ATATATATATAATCCAAGTG+AGG | + | chr7.3:29339633-29339652 | MS.gene27700:intron | 20.0% |
| !! | ATCAAATTATTAGTCATGAA+GGG | + | chr7.3:29341640-29341659 | MS.gene27700:intron | 20.0% |
| !! | GAAATTCATATATAACGAAA+GGG | - | chr7.3:29344349-29344368 | None:intergenic | 20.0% |
| !! | GATATAATCTCAGAAAATAA+AGG | - | chr7.3:29343718-29343737 | None:intergenic | 20.0% |
| !! | TACAAAATATTGTGAAATAG+CGG | + | chr7.3:29339011-29339030 | MS.gene27700:intron | 20.0% |
| !! | TGAAATTCATATATAACGAA+AGG | - | chr7.3:29344350-29344369 | None:intergenic | 20.0% |
| !! | TTACTATGACTTTCTTAAAT+TGG | + | chr7.3:29343664-29343683 | MS.gene27700:intron | 20.0% |
| !! | TTCGAATATGATAGTAATAA+TGG | + | chr7.3:29343379-29343398 | MS.gene27700:intron | 20.0% |
| !!! | AATCTGTAAGTATTTTTGTT+AGG | + | chr7.3:29344148-29344167 | MS.gene27700:intron | 20.0% |
| !!! | ATCTGTAAGTATTTTTGTTA+GGG | + | chr7.3:29344149-29344168 | MS.gene27700:intron | 20.0% |
| !!! | ATTTCATAATATCGTTTTGA+AGG | + | chr7.3:29340762-29340781 | MS.gene27700:intron | 20.0% |
| !!! | CAATTTACTTCATATGTTTT+TGG | + | chr7.3:29341525-29341544 | MS.gene27700:intron | 20.0% |
| !!! | GTGTTGAATTTTTGATATTA+GGG | + | chr7.3:29339181-29339200 | MS.gene27700:intron | 20.0% |
| !!! | GTTTTGATCATATATTCTTT+GGG | + | chr7.3:29340414-29340433 | MS.gene27700:intron | 20.0% |
| !!! | TATAAATTTTAGAGTTACCT+TGG | + | chr7.3:29341390-29341409 | MS.gene27700:intron | 20.0% |
| !!! | TCCACTTATATATATTTTGT+AGG | + | chr7.3:29340217-29340236 | MS.gene27700:intron | 20.0% |
| !!! | TGTTTTGATCATATATTCTT+TGG | + | chr7.3:29340413-29340432 | MS.gene27700:intron | 20.0% |
| !!! | TTATGAATGAGTATTGATTT+TGG | + | chr7.3:29342430-29342449 | MS.gene27700:intron | 20.0% |
| !!! | TTTTCTTAATATGCATCTTT+TGG | + | chr7.3:29341725-29341744 | MS.gene27700:intron | 20.0% |
| !!! | TTTTGATCATATATTCTTTG+GGG | + | chr7.3:29340415-29340434 | MS.gene27700:intron | 20.0% |
| !!! | TTTTTGTTTTTTAAGTAACC+AGG | - | chr7.3:29342192-29342211 | None:intergenic | 20.0% |
| ! | AAAGGCAATGAATAAAACAT+TGG | - | chr7.3:29342461-29342480 | None:intergenic | 25.0% |
| ! | AAGATGATATAACATTTACC+CGG | - | chr7.3:29340788-29340807 | None:intergenic | 25.0% |
| ! | AAGCAAAACGGTAAATTAAT+AGG | - | chr7.3:29339986-29340005 | None:intergenic | 25.0% |
| ! | AATGAAACTGAGACATAATA+AGG | - | chr7.3:29341156-29341175 | None:intergenic | 25.0% |
| ! | ACCATATCAACAAACATTAA+CGG | - | chr7.3:29339320-29339339 | None:intergenic | 25.0% |
| ! | AGAGAATAATTATCAAGGTA+GGG | - | chr7.3:29344024-29344043 | None:intergenic | 25.0% |
| ! | ATGAACAATAACAACAATAG+AGG | + | chr7.3:29338467-29338486 | MS.gene27700:CDS | 25.0% |
| ! | ATGTTAGTGTTAAGTGTTAA+TGG | + | chr7.3:29343597-29343616 | MS.gene27700:intron | 25.0% |
| ! | ATTTCACTTATATTTCATGC+CGG | + | chr7.3:29341752-29341771 | MS.gene27700:intron | 25.0% |
| ! | CAATGCAAAATTTCTACTTA+TGG | - | chr7.3:29342801-29342820 | None:intergenic | 25.0% |
| ! | GATTATATCCATTCATTTGT+TGG | + | chr7.3:29343729-29343748 | MS.gene27700:intron | 25.0% |
| ! | GCCTACAAAATATATATAAG+TGG | - | chr7.3:29340221-29340240 | None:intergenic | 25.0% |
| ! | GGTAAATGTTATATCATCTT+GGG | + | chr7.3:29340788-29340807 | MS.gene27700:intron | 25.0% |
| ! | GTAAATGTTATATCATCTTG+GGG | + | chr7.3:29340789-29340808 | MS.gene27700:intron | 25.0% |
| ! | TAAGAAAATCTACAGTATCT+TGG | - | chr7.3:29343350-29343369 | None:intergenic | 25.0% |
| ! | TACAAGATATATAACAGTGA+TGG | + | chr7.3:29343853-29343872 | MS.gene27700:intron | 25.0% |
| ! | TCCATAAGGTTAATGATATA+CGG | - | chr7.3:29343223-29343242 | None:intergenic | 25.0% |
| ! | TGAACAATAACAACAATAGA+GGG | + | chr7.3:29338468-29338487 | MS.gene27700:CDS | 25.0% |
| ! | TGGGTAGAAAAATTAACAAA+AGG | - | chr7.3:29340844-29340863 | None:intergenic | 25.0% |
| ! | TGTATTCAGATAAACAAGTT+TGG | + | chr7.3:29341289-29341308 | MS.gene27700:intron | 25.0% |
| ! | TTAATTGAAAATAGCAGACA+TGG | + | chr7.3:29341968-29341987 | MS.gene27700:intron | 25.0% |
| ! | TTCTACTTATGGATTCATTA+GGG | - | chr7.3:29342790-29342809 | None:intergenic | 25.0% |
| ! | TTTCAATTAACTTCGACAAT+TGG | - | chr7.3:29341958-29341977 | None:intergenic | 25.0% |
| ! | TTTCTACTTATGGATTCATT+AGG | - | chr7.3:29342791-29342810 | None:intergenic | 25.0% |
| !! | ATTATTTCCTAGATTTCTAG+AGG | - | chr7.3:29340661-29340680 | None:intergenic | 25.0% |
| !! | ATTTTGTTAGTTCACAAGAT+TGG | + | chr7.3:29339527-29339546 | MS.gene27700:intron | 25.0% |
| !! | CTAAAAACAATTTTGTTCCA+AGG | - | chr7.3:29341410-29341429 | None:intergenic | 25.0% |
| !! | GCATTTACAAATTCAAGTTA+TGG | + | chr7.3:29342568-29342587 | MS.gene27700:CDS | 25.0% |
| !! | GTTTGTTGATTAAGTAATTG+TGG | + | chr7.3:29340178-29340197 | MS.gene27700:intron | 25.0% |
| !! | TACATGACAAAATTGTGTTT+TGG | + | chr7.3:29341876-29341895 | MS.gene27700:intron | 25.0% |
| !! | TTGATAATTATTCTCTGCAT+GGG | + | chr7.3:29344028-29344047 | MS.gene27700:intron | 25.0% |
| !! | TTTTGTTAATTTTTCTACCC+AGG | + | chr7.3:29340843-29340862 | MS.gene27700:intron | 25.0% |
| !!! | CCTAAATACTCTTTTTTCTA+AGG | + | chr7.3:29343309-29343328 | MS.gene27700:CDS | 25.0% |
| !!! | CCTTAGAAAAAAGAGTATTT+AGG | - | chr7.3:29343312-29343331 | None:intergenic | 25.0% |
| !!! | GGTGTTGAATTTTTGATATT+AGG | + | chr7.3:29339180-29339199 | MS.gene27700:intron | 25.0% |
| AAGTGAATTATGAATCTGAG+AGG | + | chr7.3:29340269-29340288 | MS.gene27700:intron | 30.0% | |
| AATATTGGATCTTGCAAAGA+AGG | + | chr7.3:29342673-29342692 | MS.gene27700:CDS | 30.0% | |
| AATATTGTGTAATACCCTTC+AGG | - | chr7.3:29343255-29343274 | None:intergenic | 30.0% | |
| AATTGCAGAAGATAATCGAT+TGG | - | chr7.3:29343428-29343447 | None:intergenic | 30.0% | |
| ACATATCATCTGATAGACTT+GGG | - | chr7.3:29339256-29339275 | None:intergenic | 30.0% | |
| AGAAGCCTATATTCTTATGA+AGG | + | chr7.3:29339287-29339306 | MS.gene27700:intron | 30.0% | |
| AGTCATGGAAAACTCTATTA+CGG | - | chr7.3:29343539-29343558 | None:intergenic | 30.0% | |
| ATAACTCACTACTAAAAGCA+AGG | - | chr7.3:29343020-29343039 | None:intergenic | 30.0% | |
| ATATTGGATCTTGCAAAGAA+GGG | + | chr7.3:29342674-29342693 | MS.gene27700:CDS | 30.0% | |
| ATATTGTCAATTGCAGATCA+TGG | - | chr7.3:29339092-29339111 | None:intergenic | 30.0% | |
| ATATTGTGTAATACCCTTCA+GGG | - | chr7.3:29343254-29343273 | None:intergenic | 30.0% | |
| ATCGATTATCTTCTGCAATT+CGG | + | chr7.3:29343428-29343447 | MS.gene27700:CDS | 30.0% | |
| ATTATGTCTCAGTTTCATTC+TGG | + | chr7.3:29341157-29341176 | MS.gene27700:intron | 30.0% | |
| CAGAGAATAATTATCAAGGT+AGG | - | chr7.3:29344025-29344044 | None:intergenic | 30.0% | |
| CATGCAGAGAATAATTATCA+AGG | - | chr7.3:29344029-29344048 | None:intergenic | 30.0% | |
| CTAAGAAAATCACAGAACTA+GGG | + | chr7.3:29343472-29343491 | MS.gene27700:CDS | 30.0% | |
| CTAATGGGAATATATGAGAA+GGG | + | chr7.3:29340922-29340941 | MS.gene27700:CDS | 30.0% | |
| CTGAAAACAATAGGATTTGA+CGG | - | chr7.3:29343150-29343169 | None:intergenic | 30.0% | |
| GAAAATTAACTAAACCACAG+TGG | - | chr7.3:29339429-29339448 | None:intergenic | 30.0% | |
| GAAATGTAGCTGAAAACAAT+AGG | - | chr7.3:29343159-29343178 | None:intergenic | 30.0% | |
| GAGAATAATTATCAAGGTAG+GGG | - | chr7.3:29344023-29344042 | None:intergenic | 30.0% | |
| GCATCACATAACAAAACAAA+AGG | - | chr7.3:29342479-29342498 | None:intergenic | 30.0% | |
| GGGTAAATGTTATATCATCT+TGG | + | chr7.3:29340787-29340806 | MS.gene27700:intron | 30.0% | |
| TAAACAATCACTTGGAATCA+AGG | - | chr7.3:29340377-29340396 | None:intergenic | 30.0% | |
| TAATAACAACATTCACTGCT+TGG | - | chr7.3:29343937-29343956 | None:intergenic | 30.0% | |
| TAATGGGAATATATGAGAAG+GGG | + | chr7.3:29340923-29340942 | MS.gene27700:CDS | 30.0% | |
| TACACAATATTATGCATTCG+TGG | + | chr7.3:29343264-29343283 | MS.gene27700:CDS | 30.0% | |
| TACATATCATCTGATAGACT+TGG | - | chr7.3:29339257-29339276 | None:intergenic | 30.0% | |
| TACATTTCCTGTTACTGTAA+AGG | + | chr7.3:29343171-29343190 | MS.gene27700:CDS | 30.0% | |
| TATAGGATTGAACAAGAACT+TGG | + | chr7.3:29344421-29344440 | MS.gene27700:CDS | 30.0% | |
| TATATATCTTTCTCTCTCTC+AGG | + | chr7.3:29343057-29343076 | MS.gene27700:intron | 30.0% | |
| TCATATATAACGAAAGGGTT+AGG | - | chr7.3:29344344-29344363 | None:intergenic | 30.0% | |
| TGACATCTAGCACTTAATTT+AGG | - | chr7.3:29340717-29340736 | None:intergenic | 30.0% | |
| TTACACTTTACTCGCTTTAT+AGG | + | chr7.3:29344316-29344335 | MS.gene27700:intron | 30.0% | |
| TTAGTCATGAAGGGTAATTT+AGG | + | chr7.3:29341649-29341668 | MS.gene27700:intron | 30.0% | |
| TTGATATTCTGTTGATATGC+AGG | + | chr7.3:29344057-29344076 | MS.gene27700:intron | 30.0% | |
| TTGTACTAAATAGCATATCG+TGG | - | chr7.3:29338996-29339015 | None:intergenic | 30.0% | |
| TTTATCTATTTGTGCATGAG+TGG | + | chr7.3:29339223-29339242 | MS.gene27700:intron | 30.0% | |
| ! | ACTGATTTCCAACAAATGAA+TGG | - | chr7.3:29343740-29343759 | None:intergenic | 30.0% |
| ! | AGATATGTTTCTGAGTTCTT+GGG | - | chr7.3:29343971-29343990 | None:intergenic | 30.0% |
| ! | CTTGATAATTATTCTCTGCA+TGG | + | chr7.3:29344027-29344046 | MS.gene27700:intron | 30.0% |
| ! | GTTTCAATGGTGTTAAATAG+CGG | + | chr7.3:29338914-29338933 | MS.gene27700:intron | 30.0% |
| ! | TATTACACCTCTAGAAATCT+AGG | + | chr7.3:29340651-29340670 | MS.gene27700:intron | 30.0% |
| ! | TGACCAAAAACTTACGTTTT+GGG | + | chr7.3:29341335-29341354 | MS.gene27700:intron | 30.0% |
| ! | TTGACCAAAAACTTACGTTT+TGG | + | chr7.3:29341334-29341353 | MS.gene27700:intron | 30.0% |
| ! | TTGATAACACAACTTACTCA+AGG | - | chr7.3:29342884-29342903 | None:intergenic | 30.0% |
| !! | AAAAAAGAGTATTTAGGCAG+TGG | - | chr7.3:29343306-29343325 | None:intergenic | 30.0% |
| !! | AAGTATTTTTGTTAGGGATC+TGG | + | chr7.3:29344155-29344174 | MS.gene27700:intron | 30.0% |
| !! | AATGGAATTTGTTAAAGGGT+AGG | + | chr7.3:29341241-29341260 | MS.gene27700:intron | 30.0% |
| !! | TGTTGTTGTTGTTGATAATG+TGG | - | chr7.3:29338602-29338621 | None:intergenic | 30.0% |
| !!! | ACGTAAGTTTTTGGTCAAAA+TGG | - | chr7.3:29341332-29341351 | None:intergenic | 30.0% |
| !!! | GTTGTTGTTGTTTTAGACAT+TGG | + | chr7.3:29341443-29341462 | MS.gene27700:intron | 30.0% |
| !!! | TCGTTTTGAAAAAAGGAAAG+CGG | - | chr7.3:29339876-29339895 | None:intergenic | 30.0% |
| !!! | TGATCAATTTTTTCCAATGC+AGG | - | chr7.3:29341060-29341079 | None:intergenic | 30.0% |
| AAAGCGAGTAAAGTGTAAAG+TGG | - | chr7.3:29344314-29344333 | None:intergenic | 35.0% | |
| AAATCTACAGTATCTTGGCA+TGG | - | chr7.3:29343345-29343364 | None:intergenic | 35.0% | |
| AACAAAAAGAGCAATCACCT+AGG | - | chr7.3:29338830-29338849 | None:intergenic | 35.0% | |
| AACGCATAATGTCATCTTTC+AGG | - | chr7.3:29342613-29342632 | None:intergenic | 35.0% | |
| AACTAAGGGAAATGAGTTTG+AGG | + | chr7.3:29340876-29340895 | MS.gene27700:CDS | 35.0% | |
| AAGCGAGTAAAGTGTAAAGT+GGG | - | chr7.3:29344313-29344332 | None:intergenic | 35.0% | |
| AATAGGATTTGACGGTTTGA+AGG | - | chr7.3:29343142-29343161 | None:intergenic | 35.0% | |
| AATGCTTTCTTCTTGGATAG+GGG | - | chr7.3:29340962-29340981 | None:intergenic | 35.0% | |
| ACAAAAAGAGCAATCACCTA+GGG | - | chr7.3:29338829-29338848 | None:intergenic | 35.0% | |
| ACAATATTATGCATTCGTGG+AGG | + | chr7.3:29343267-29343286 | MS.gene27700:CDS | 35.0% | |
| AGATTGTTCTATGCTTGTCA+TGG | + | chr7.3:29342712-29342731 | MS.gene27700:CDS | 35.0% | |
| AGTGTAAAGTGGGAAAATCA+AGG | - | chr7.3:29344303-29344322 | None:intergenic | 35.0% | |
| ATGTGATGCAGTTGTTATAC+TGG | + | chr7.3:29342490-29342509 | MS.gene27700:intron | 35.0% | |
| ATTCTTGCTAGGGCTAAAAA+TGG | + | chr7.3:29341006-29341025 | MS.gene27700:CDS | 35.0% | |
| CAAATGTGCTGAAAGTTTCT+TGG | + | chr7.3:29341930-29341949 | MS.gene27700:intron | 35.0% | |
| CAATTGGAATGCTTTCTTCT+TGG | - | chr7.3:29340969-29340988 | None:intergenic | 35.0% | |
| CACCTAACTTATAATCACTC+CGG | - | chr7.3:29341774-29341793 | None:intergenic | 35.0% | |
| CGATTTGTCTTGTGTTTCAA+TGG | + | chr7.3:29338901-29338920 | MS.gene27700:intron | 35.0% | |
| CTTCACACATGTTCATTCTA+TGG | + | chr7.3:29342982-29343001 | MS.gene27700:intron | 35.0% | |
| GAATCAGAAATTAGATGGAG+CGG | + | chr7.3:29339735-29339754 | MS.gene27700:intron | 35.0% | |
| GAATGCTTTCTTCTTGGATA+GGG | - | chr7.3:29340963-29340982 | None:intergenic | 35.0% | |
| GAGTGATTATAAGTTAGGTG+AGG | + | chr7.3:29341774-29341793 | MS.gene27700:intron | 35.0% | |
| GCCGTATATCATTAACCTTA+TGG | + | chr7.3:29343219-29343238 | MS.gene27700:CDS | 35.0% | |
| GCTAAGAAAATCACAGAACT+AGG | + | chr7.3:29343471-29343490 | MS.gene27700:CDS | 35.0% | |
| GCTAATGGGAATATATGAGA+AGG | + | chr7.3:29340921-29340940 | MS.gene27700:CDS | 35.0% | |
| GGCTTGAATCAGAAATTAGA+TGG | + | chr7.3:29339730-29339749 | MS.gene27700:intron | 35.0% | |
| GTGTAAAGTGGGAAAATCAA+GGG | - | chr7.3:29344302-29344321 | None:intergenic | 35.0% | |
| TATATAGCCTGGTCAATGAA+TGG | - | chr7.3:29344469-29344488 | None:intergenic | 35.0% | |
| TATATGAGAAGGGGTTTGAA+AGG | + | chr7.3:29340932-29340951 | MS.gene27700:CDS | 35.0% | |
| TATTCTGTTGATATGCAGGT+TGG | + | chr7.3:29344061-29344080 | MS.gene27700:intron | 35.0% | |
| TGTTAGTTCACAAGATTGGA+AGG | + | chr7.3:29339531-29339550 | MS.gene27700:intron | 35.0% | |
| TTCTTGTTCAATCCTATACC+TGG | - | chr7.3:29344419-29344438 | None:intergenic | 35.0% | |
| TTGAAGTCCTTTACAGTAAC+AGG | - | chr7.3:29343181-29343200 | None:intergenic | 35.0% | |
| TTGACCAGGCTATATATTGT+CGG | + | chr7.3:29344473-29344492 | MS.gene27700:CDS | 35.0% | |
| TTTGTATCTCTATGTTGTCC+AGG | + | chr7.3:29344398-29344417 | MS.gene27700:intron | 35.0% | |
| ! | ATTCAAGTTATGGTCACAAC+AGG | + | chr7.3:29342578-29342597 | MS.gene27700:CDS | 35.0% |
| ! | CAGATATGTTTCTGAGTTCT+TGG | - | chr7.3:29343972-29343991 | None:intergenic | 35.0% |
| ! | CAGCATTTCATGGTATTTTG+GGG | - | chr7.3:29339916-29339935 | None:intergenic | 35.0% |
| ! | GCAGCATTTCATGGTATTTT+GGG | - | chr7.3:29339917-29339936 | None:intergenic | 35.0% |
| ! | GCCGTTAATGTTTGTTGATA+TGG | + | chr7.3:29339316-29339335 | MS.gene27700:intron | 35.0% |
| ! | GTTCTGTGATTTTCTTAGCA+AGG | - | chr7.3:29343470-29343489 | None:intergenic | 35.0% |
| !! | ACTCACTTTAGAGTGTAAAG+TGG | + | chr7.3:29344195-29344214 | MS.gene27700:intron | 35.0% |
| !! | GGTTCTCGTGTAATTTTGAT+AGG | + | chr7.3:29339337-29339356 | MS.gene27700:intron | 35.0% |
| !! | TGTAAGTAGTGGGTAACAAT+GGG | - | chr7.3:29339956-29339975 | None:intergenic | 35.0% |
| !! | TTCAAGTTGTTCGCATTGTT+CGG | - | chr7.3:29338560-29338579 | None:intergenic | 35.0% |
| !!! | ATAATATCGTTTTGAAGGCC+GGG | + | chr7.3:29340767-29340786 | MS.gene27700:intron | 35.0% |
| !!! | CATAATATCGTTTTGAAGGC+CGG | + | chr7.3:29340766-29340785 | MS.gene27700:intron | 35.0% |
| !!! | TCCTTTTTTCAAAACGACAC+TGG | + | chr7.3:29339879-29339898 | MS.gene27700:intron | 35.0% |
| AAACACATCCTCTGCTATCA+AGG | - | chr7.3:29342351-29342370 | None:intergenic | 40.0% | |
| AACAACAACAGTATGTGCAG+AGG | + | chr7.3:29338612-29338631 | MS.gene27700:intron | 40.0% | |
| AAGAATGTCACTGCCAGTAA+GGG | - | chr7.3:29340992-29341011 | None:intergenic | 40.0% | |
| AAGTGAGTTGCTCACTTTAG+AGG | - | chr7.3:29344183-29344202 | None:intergenic | 40.0% | |
| AAGTGCTAGATGTCAGATTG+TGG | + | chr7.3:29340722-29340741 | MS.gene27700:intron | 40.0% | |
| AATGCGAACAACTTGAACAC+CGG | + | chr7.3:29338563-29338582 | MS.gene27700:CDS | 40.0% | |
| AATTATCAAGGTAGGGGAGA+AGG | - | chr7.3:29344017-29344036 | None:intergenic | 40.0% | |
| ACAAAATCGAGATCCTATGC+AGG | - | chr7.3:29342325-29342344 | None:intergenic | 40.0% | |
| ACTCAGAAACATATCTGCAC+AGG | + | chr7.3:29343975-29343994 | MS.gene27700:CDS | 40.0% | |
| ATTCAAGCCACTCACAAACA+CGG | - | chr7.3:29339719-29339738 | None:intergenic | 40.0% | |
| CAATTTATCTGCTTCCACTG+TGG | + | chr7.3:29339412-29339431 | MS.gene27700:intron | 40.0% | |
| CATAATGTCATCTTTCAGGC+TGG | - | chr7.3:29342609-29342628 | None:intergenic | 40.0% | |
| CATGATTGCTCATCTATAGC+AGG | - | chr7.3:29343634-29343653 | None:intergenic | 40.0% | |
| CATGGAAAACTCTATTACGG+TGG | - | chr7.3:29343536-29343555 | None:intergenic | 40.0% | |
| CTATTGAAGGCTTGAACTCT+GGG | - | chr7.3:29343099-29343118 | None:intergenic | 40.0% | |
| CTCAGAAACATATCTGCACA+GGG | + | chr7.3:29343976-29343995 | MS.gene27700:CDS | 40.0% | |
| GCAAGATCCAATATTCTTCC+TGG | - | chr7.3:29342668-29342687 | None:intergenic | 40.0% | |
| GGAATGCTTTCTTCTTGGAT+AGG | - | chr7.3:29340964-29340983 | None:intergenic | 40.0% | |
| GGTCACAAGATCGAAAATCA+GGG | - | chr7.3:29340318-29340337 | None:intergenic | 40.0% | |
| TACACAGAGATGTGTTTCAC+AGG | + | chr7.3:29339849-29339868 | MS.gene27700:intron | 40.0% | |
| TATTGAAGGCTTGAACTCTG+GGG | - | chr7.3:29343098-29343117 | None:intergenic | 40.0% | |
| TCCTCAAGTAAGCAAAGAGA+AGG | - | chr7.3:29341111-29341130 | None:intergenic | 40.0% | |
| TCCTTCTCTTTGCTTACTTG+AGG | + | chr7.3:29341107-29341126 | MS.gene27700:intron | 40.0% | |
| TCTATTGAAGGCTTGAACTC+TGG | - | chr7.3:29343100-29343119 | None:intergenic | 40.0% | |
| TCTCAAGTGTGTAAAGAGCT+TGG | + | chr7.3:29342542-29342561 | MS.gene27700:CDS | 40.0% | |
| TCTCTATGTTGTCCAGGTAT+AGG | + | chr7.3:29344404-29344423 | MS.gene27700:intron | 40.0% | |
| TGAATCAGCTGCTCTATTGA+AGG | - | chr7.3:29343112-29343131 | None:intergenic | 40.0% | |
| TGCATTTAGCATTCCTGCAT+TGG | + | chr7.3:29341044-29341063 | MS.gene27700:CDS | 40.0% | |
| TGCCGGAGTGATTATAAGTT+AGG | + | chr7.3:29341769-29341788 | MS.gene27700:intron | 40.0% | |
| TGGTACTCCAGGAAGAATAT+TGG | + | chr7.3:29342658-29342677 | MS.gene27700:CDS | 40.0% | |
| TTCTATGCTTGTCATGGATG+AGG | + | chr7.3:29342718-29342737 | MS.gene27700:CDS | 40.0% | |
| ! | AACAATGGGTTCGAAACTGA+AGG | - | chr7.3:29339942-29339961 | None:intergenic | 40.0% |
| ! | AACACAGATCTTTTCACTCG+AGG | + | chr7.3:29343902-29343921 | MS.gene27700:intron | 40.0% |
| ! | AACTGAAAGCACGTGCTATA+GGG | - | chr7.3:29340553-29340572 | None:intergenic | 40.0% |
| ! | AGTCTGAAACAAATGACCCT+AGG | + | chr7.3:29338810-29338829 | MS.gene27700:CDS | 40.0% |
| ! | AGTGAACTTGGTAACCTATG+AGG | + | chr7.3:29344117-29344136 | MS.gene27700:CDS | 40.0% |
| ! | CGCAGCATTTCATGGTATTT+TGG | - | chr7.3:29339918-29339937 | None:intergenic | 40.0% |
| ! | GCTCCCAAAACGTAAGTTTT+TGG | - | chr7.3:29341341-29341360 | None:intergenic | 40.0% |
| ! | GGGTGTATTGGGAAAGTTTT+CGG | - | chr7.3:29342293-29342312 | None:intergenic | 40.0% |
| ! | TAACTGAAAGCACGTGCTAT+AGG | - | chr7.3:29340554-29340573 | None:intergenic | 40.0% |
| ! | TAGGTTGAGTATATGAGCTC+AGG | + | chr7.3:29339356-29339375 | MS.gene27700:intron | 40.0% |
| ! | TCAAGTTGTTCGCATTGTTC+GGG | - | chr7.3:29338559-29338578 | None:intergenic | 40.0% |
| ! | TTTGTCTACCTTGATAGCAG+AGG | + | chr7.3:29342340-29342359 | MS.gene27700:intron | 40.0% |
| !! | AAAATCAGGGCATCGTAACA+AGG | - | chr7.3:29340305-29340324 | None:intergenic | 40.0% |
| !! | AAATCAGGGCATCGTAACAA+GGG | - | chr7.3:29340304-29340323 | None:intergenic | 40.0% |
| !! | GTGTAAGTAGTGGGTAACAA+TGG | - | chr7.3:29339957-29339976 | None:intergenic | 40.0% |
| !!! | GCCAGTGTCGTTTTGAAAAA+AGG | - | chr7.3:29339883-29339902 | None:intergenic | 40.0% |
| AATAGAGGGAGATATCCACC+TGG | + | chr7.3:29338482-29338501 | MS.gene27700:CDS | 45.0% | |
| AATTCCGCCATTCATTGACC+AGG | + | chr7.3:29344459-29344478 | MS.gene27700:CDS | 45.0% | |
| AGAAATTAGATGGAGCGGCT+GGG | + | chr7.3:29339740-29339759 | MS.gene27700:intron | 45.0% | |
| AGCATTCCAATTGCCCTTAC+TGG | + | chr7.3:29340976-29340995 | MS.gene27700:CDS | 45.0% | |
| AGGCAAAGCGTGTAAGTAGT+GGG | - | chr7.3:29339966-29339985 | None:intergenic | 45.0% | |
| AGGTAGACGAAATTGCGATC+TGG | + | chr7.3:29339653-29339672 | MS.gene27700:intron | 45.0% | |
| ATAGAGGGAGATATCCACCT+GGG | + | chr7.3:29338483-29338502 | MS.gene27700:CDS | 45.0% | |
| ATAGCCTGGTCAATGAATGG+CGG | - | chr7.3:29344466-29344485 | None:intergenic | 45.0% | |
| ATCGAGATCCTATGCAGGAT+CGG | - | chr7.3:29342320-29342339 | None:intergenic | 45.0% | |
| ATGCGAACAACTTGAACACC+GGG | + | chr7.3:29338564-29338583 | MS.gene27700:CDS | 45.0% | |
| ATGGATGAGCTTACCCTGAA+GGG | + | chr7.3:29343238-29343257 | MS.gene27700:CDS | 45.0% | |
| ATGTGGTCTCTGTTGAAACC+CGG | - | chr7.3:29338585-29338604 | None:intergenic | 45.0% | |
| ATTATGCATTCGTGGAGGAG+AGG | + | chr7.3:29343272-29343291 | MS.gene27700:CDS | 45.0% | |
| CAACCTGTTCATCTGCTTGT+TGG | + | chr7.3:29342638-29342657 | MS.gene27700:CDS | 45.0% | |
| CAAGAATGTCACTGCCAGTA+AGG | - | chr7.3:29340993-29341012 | None:intergenic | 45.0% | |
| CAAGTTATGGTCACAACAGG+TGG | + | chr7.3:29342581-29342600 | MS.gene27700:CDS | 45.0% | |
| CAGATTGAAGCGATCCTCAT+AGG | - | chr7.3:29344134-29344153 | None:intergenic | 45.0% | |
| CCAAGTTCACTGCTAAACCA+AGG | - | chr7.3:29344108-29344127 | None:intergenic | 45.0% | |
| CCTTGGTTTAGCAGTGAACT+TGG | + | chr7.3:29344105-29344124 | MS.gene27700:CDS | 45.0% | |
| CTCCCATCAGATTACGATTC+CGG | - | chr7.3:29342070-29342089 | None:intergenic | 45.0% | |
| CTTTCTTCTTGGATAGGGGA+AGG | - | chr7.3:29340958-29340977 | None:intergenic | 45.0% | |
| GAATCGTAATCTGATGGGAG+TGG | + | chr7.3:29342070-29342089 | MS.gene27700:intron | 45.0% | |
| GCAATTTCGTCTACCTCACT+TGG | - | chr7.3:29339649-29339668 | None:intergenic | 45.0% | |
| GCTAGGGCTAAAAATGGAAC+AGG | + | chr7.3:29341012-29341031 | MS.gene27700:CDS | 45.0% | |
| GGGTCACAAGATCGAAAATC+AGG | - | chr7.3:29340319-29340338 | None:intergenic | 45.0% | |
| GTACCAACAAGCAGATGAAC+AGG | - | chr7.3:29342644-29342663 | None:intergenic | 45.0% | |
| TAGGCAAAGCGTGTAAGTAG+TGG | - | chr7.3:29339967-29339986 | None:intergenic | 45.0% | |
| TATGGATGAGCTTACCCTGA+AGG | + | chr7.3:29343237-29343256 | MS.gene27700:CDS | 45.0% | |
| TCAGGGTAAGCTCATCCATA+AGG | - | chr7.3:29343237-29343256 | None:intergenic | 45.0% | |
| TGATACACGCTATAGGACAG+AGG | + | chr7.3:29339576-29339595 | MS.gene27700:CDS | 45.0% | |
| TGCAGGAATCTCGTTTGTAC+TGG | + | chr7.3:29343573-29343592 | MS.gene27700:CDS | 45.0% | |
| TGGCAGTGACATTCTTGCTA+GGG | + | chr7.3:29340996-29341015 | MS.gene27700:CDS | 45.0% | |
| TTGAAGCGTGAGCTGCTAAT+GGG | + | chr7.3:29340907-29340926 | MS.gene27700:CDS | 45.0% | |
| ! | ACTGGTTCCAACACGAGAAT+TGG | + | chr7.3:29342508-29342527 | MS.gene27700:CDS | 45.0% |
| ! | GTTTTCCATGACTTCCGCAA+TGG | + | chr7.3:29343546-29343565 | MS.gene27700:CDS | 45.0% |
| ! | TAGGAGTTGATTCTGCGCAT+AGG | + | chr7.3:29340488-29340507 | MS.gene27700:intron | 45.0% |
| ! | TGAACATGTGTGAAGAGCAC+AGG | - | chr7.3:29342977-29342996 | None:intergenic | 45.0% |
| ! | TTTGAAGCGTGAGCTGCTAA+TGG | + | chr7.3:29340906-29340925 | MS.gene27700:CDS | 45.0% |
| !! | CACATCTGTTGTAGCCTTGT+AGG | + | chr7.3:29340469-29340488 | MS.gene27700:intron | 45.0% |
| !! | GAGTGCTGACAATAAGCAGT+AGG | - | chr7.3:29341186-29341205 | None:intergenic | 45.0% |
| !! | TCTTCGAGTTGGTACAGAAC+AGG | + | chr7.3:29340445-29340464 | MS.gene27700:intron | 45.0% |
| !! | TTTGAAAAATAAAAATAAAA+TGG | + | chr7.3:29341223-29341242 | MS.gene27700:intron | 5.0% |
| AAACTCGAGATGCAGGACCT+GGG | - | chr7.3:29340349-29340368 | None:intergenic | 50.0% | |
| ACTCGTACGATCCTACGAGT+TGG | - | chr7.3:29342010-29342029 | None:intergenic | 50.0% | |
| AGAATCGCGATCCAACTCGT+AGG | + | chr7.3:29341996-29342015 | MS.gene27700:intron | 50.0% | |
| AGCACTATAGCAGTGTTGCG+TGG | + | chr7.3:29339041-29339060 | MS.gene27700:intron | 50.0% | |
| AGCGGTGGAATCGAGTGTTT+CGG | + | chr7.3:29342119-29342138 | MS.gene27700:intron | 50.0% | |
| ATGCACCATTGCGGAAGTCA+TGG | - | chr7.3:29343554-29343573 | None:intergenic | 50.0% | |
| CAGAAATTAGATGGAGCGGC+TGG | + | chr7.3:29339739-29339758 | MS.gene27700:intron | 50.0% | |
| CAGCTGCTGATACACGCTAT+AGG | + | chr7.3:29339569-29339588 | MS.gene27700:CDS | 50.0% | |
| CAGGACGTGACAGCAACTAA+GGG | + | chr7.3:29340862-29340881 | MS.gene27700:intron | 50.0% | |
| CAGTCTAACGACTATGCACG+CGG | - | chr7.3:29339770-29339789 | None:intergenic | 50.0% | |
| CCATCAGATTACGATTCCGG+CGG | - | chr7.3:29342067-29342086 | None:intergenic | 50.0% | |
| CGCCGGAATCGTAATCTGAT+GGG | + | chr7.3:29342065-29342084 | MS.gene27700:intron | 50.0% | |
| CTATAGCGTGTATCAGCAGC+TGG | - | chr7.3:29339571-29339590 | None:intergenic | 50.0% | |
| CTGAAGGTCGCAGCATTTCA+TGG | - | chr7.3:29339926-29339945 | None:intergenic | 50.0% | |
| CTGGCAGTGACATTCTTGCT+AGG | + | chr7.3:29340995-29341014 | MS.gene27700:CDS | 50.0% | |
| CTTAGTTGCTGTCACGTCCT+GGG | - | chr7.3:29340863-29340882 | None:intergenic | 50.0% | |
| GATTCCTGCATGCACCATTG+CGG | - | chr7.3:29343563-29343582 | None:intergenic | 50.0% | |
| GCGCAGAATCAACTCCTACA+AGG | - | chr7.3:29340486-29340505 | None:intergenic | 50.0% | |
| GGAGATATCCACCTGGGATT+GGG | + | chr7.3:29338489-29338508 | MS.gene27700:CDS | 50.0% | |
| GGTAGTCAAACTCGAGATGC+AGG | - | chr7.3:29340356-29340375 | None:intergenic | 50.0% | |
| TAAGTAACCAGGTCGCGAAC+CGG | - | chr7.3:29342181-29342200 | None:intergenic | 50.0% | |
| TACTGACACCAACGTTGTCG+AGG | + | chr7.3:29338769-29338788 | MS.gene27700:CDS | 50.0% | |
| TATCCACCTGGGATTGGGTT+AGG | + | chr7.3:29338494-29338513 | MS.gene27700:CDS | 50.0% | |
| TCACTGCCAGTAAGGGCAAT+TGG | - | chr7.3:29340985-29341004 | None:intergenic | 50.0% | |
| TCGAGATCCTATGCAGGATC+GGG | - | chr7.3:29342319-29342338 | None:intergenic | 50.0% | |
| TGCAGAGCCAATTCTCGTGT+TGG | - | chr7.3:29342518-29342537 | None:intergenic | 50.0% | |
| TGCGCCTTCCTCAAAATTCC+CGG | + | chr7.3:29342159-29342178 | MS.gene27700:intron | 50.0% | |
| TTGGTCGATCCGGAAGGTTT+GGG | + | chr7.3:29344080-29344099 | MS.gene27700:CDS | 50.0% | |
| ! | CATCTGCTTGTTGGTACTCC+AGG | + | chr7.3:29342647-29342666 | MS.gene27700:CDS | 50.0% |
| !! | CGAACCGGGAATTTTGAGGA+AGG | - | chr7.3:29342166-29342185 | None:intergenic | 50.0% |
| !! | GATATGCAGGTTGGTCGATC+CGG | + | chr7.3:29344070-29344089 | MS.gene27700:intron | 50.0% |
| AAGTAACCAGGTCGCGAACC+GGG | - | chr7.3:29342180-29342199 | None:intergenic | 55.0% | |
| ACTTCCGCAATGGTGCATGC+AGG | + | chr7.3:29343556-29343575 | MS.gene27700:CDS | 55.0% | |
| AGCAACAACAGTGGCTGAGG+AGG | + | chr7.3:29338729-29338748 | MS.gene27700:intron | 55.0% | |
| AGCAGCAACAACAGTGGCTG+AGG | + | chr7.3:29338726-29338745 | MS.gene27700:intron | 55.0% | |
| AGCAGCAGCAGCAACAACAG+TGG | + | chr7.3:29338720-29338739 | MS.gene27700:intron | 55.0% | |
| ATCCTATGCAGGATCGGGGA+AGG | - | chr7.3:29342314-29342333 | None:intergenic | 55.0% | |
| CAAACTCGAGATGCAGGACC+TGG | - | chr7.3:29340350-29340369 | None:intergenic | 55.0% | |
| CCACTCACAAACACGGCAAG+AGG | - | chr7.3:29339712-29339731 | None:intergenic | 55.0% | |
| CCAGGACGTGACAGCAACTA+AGG | + | chr7.3:29340861-29340880 | MS.gene27700:intron | 55.0% | |
| CCGCCGGAATCGTAATCTGA+TGG | + | chr7.3:29342064-29342083 | MS.gene27700:intron | 55.0% | |
| CCTCTTGCCGTGTTTGTGAG+TGG | + | chr7.3:29339709-29339728 | MS.gene27700:intron | 55.0% | |
| CCTTAGTTGCTGTCACGTCC+TGG | - | chr7.3:29340864-29340883 | None:intergenic | 55.0% | |
| CGAGATCCTATGCAGGATCG+GGG | - | chr7.3:29342318-29342337 | None:intergenic | 55.0% | |
| CGCGTGCATAGTCGTTAGAC+TGG | + | chr7.3:29339768-29339787 | MS.gene27700:intron | 55.0% | |
| CGTAATCTGATGGGAGTGGC+CGG | + | chr7.3:29342074-29342093 | MS.gene27700:intron | 55.0% | |
| CTCAACCTCCTCGACAACGT+TGG | - | chr7.3:29338780-29338799 | None:intergenic | 55.0% | |
| GGGAGATATCCACCTGGGAT+TGG | + | chr7.3:29338488-29338507 | MS.gene27700:CDS | 55.0% | |
| GGGGATTGCGATCTTCGAGT+TGG | + | chr7.3:29340434-29340453 | MS.gene27700:intron | 55.0% | |
| GGGTTAGGAGGACAAGGTAG+TGG | + | chr7.3:29338509-29338528 | MS.gene27700:CDS | 55.0% | |
| GTTGGTCGATCCGGAAGGTT+TGG | + | chr7.3:29344079-29344098 | MS.gene27700:CDS | 55.0% | |
| TCCTATGCAGGATCGGGGAA+GGG | - | chr7.3:29342313-29342332 | None:intergenic | 55.0% | |
| TGACACCAACGTTGTCGAGG+AGG | + | chr7.3:29338772-29338791 | MS.gene27700:CDS | 55.0% | |
| TGGCTGAGGAGGAACCAGTT+GGG | + | chr7.3:29338740-29338759 | MS.gene27700:intron | 55.0% | |
| TGTCAGTACCACCACCCAAC+TGG | - | chr7.3:29338757-29338776 | None:intergenic | 55.0% | |
| TGTCCTCCTAACCCAATCCC+AGG | - | chr7.3:29338503-29338522 | None:intergenic | 55.0% | |
| ! | AAAATTCCCGGTTCGCGACC+TGG | + | chr7.3:29342171-29342190 | MS.gene27700:intron | 55.0% |
| ! | ACCAAGGTGCCCAAACCTTC+CGG | - | chr7.3:29344092-29344111 | None:intergenic | 55.0% |
| ! | ACCGCTTCCACGCGTTTTTG+CGG | - | chr7.3:29342105-29342124 | None:intergenic | 55.0% |
| ! | ACGCGTTTTTGCGGCGATTC+CGG | - | chr7.3:29342096-29342115 | None:intergenic | 55.0% |
| ! | AGGATCGGGGAAGGGTGTAT+TGG | - | chr7.3:29342305-29342324 | None:intergenic | 55.0% |
| ! | GGAGGACAAGGTAGTGGTAG+TGG | + | chr7.3:29338515-29338534 | MS.gene27700:CDS | 55.0% |
| ! | GGATCGGGGAAGGGTGTATT+GGG | - | chr7.3:29342304-29342323 | None:intergenic | 55.0% |
| ! | GGGATTGGGTTAGGAGGACA+AGG | + | chr7.3:29338503-29338522 | MS.gene27700:CDS | 55.0% |
| ! | GTCGCGAACCGGGAATTTTG+AGG | - | chr7.3:29342170-29342189 | None:intergenic | 55.0% |
| ! | GTGTTTCGGCCGATTCTGAG+CGG | + | chr7.3:29342133-29342152 | MS.gene27700:intron | 55.0% |
| !! | CAAGGTAGTGGTAGTGGTGG+TGG | + | chr7.3:29338521-29338540 | MS.gene27700:CDS | 55.0% |
| !! | GGACAAGGTAGTGGTAGTGG+TGG | + | chr7.3:29338518-29338537 | MS.gene27700:CDS | 55.0% |
| ACCCTTCCCCGATCCTGCAT+AGG | + | chr7.3:29342309-29342328 | MS.gene27700:intron | 60.0% | |
| AGGAGGAACCAGTTGGGTGG+TGG | + | chr7.3:29338746-29338765 | MS.gene27700:intron | 60.0% | |
| CCTCCTAACCCAATCCCAGG+TGG | - | chr7.3:29338500-29338519 | None:intergenic | 60.0% | |
| CTGAGGAGGAACCAGTTGGG+TGG | + | chr7.3:29338743-29338762 | MS.gene27700:intron | 60.0% | |
| GCAAAAACGCGTGGAAGCGG+TGG | + | chr7.3:29342104-29342123 | MS.gene27700:intron | 60.0% | |
| GCCGCAAAAACGCGTGGAAG+CGG | + | chr7.3:29342101-29342120 | MS.gene27700:intron | 60.0% | |
| GGAATCGCCGCAAAAACGCG+TGG | + | chr7.3:29342095-29342114 | MS.gene27700:intron | 60.0% | |
| GTGGCTGAGGAGGAACCAGT+TGG | + | chr7.3:29338739-29338758 | MS.gene27700:intron | 60.0% | |
| TCCGGAAGGTTTGGGCACCT+TGG | + | chr7.3:29344088-29344107 | MS.gene27700:CDS | 60.0% | |
| TCGAGATGCAGGACCTGGGT+GGG | - | chr7.3:29340345-29340364 | None:intergenic | 60.0% | |
| TTACGATTCCGGCGGCGTTC+CGG | - | chr7.3:29342059-29342078 | None:intergenic | 60.0% | |
| ! | CCACCTGGGATTGGGTTAGG+AGG | + | chr7.3:29338497-29338516 | MS.gene27700:CDS | 60.0% |
| !! | TGCAGGTTGGTCGATCCGGA+AGG | + | chr7.3:29344074-29344093 | MS.gene27700:intron | 60.0% |
| ATGCAGGACCTGGGTGGGGT+GGG | - | chr7.3:29340340-29340359 | None:intergenic | 65.0% | |
| CGAGATGCAGGACCTGGGTG+GGG | - | chr7.3:29340344-29340363 | None:intergenic | 65.0% | |
| CTCGAGATGCAGGACCTGGG+TGG | - | chr7.3:29340346-29340365 | None:intergenic | 65.0% | |
| GGCGCACAGCCGCTCAGAAT+CGG | - | chr7.3:29342145-29342164 | None:intergenic | 65.0% | |
| ATTCCGGCGGCGTTCCGGCA+CGG | - | chr7.3:29342054-29342073 | None:intergenic | 70.0% | |
| CTTGTGACCCCACCCCACCC+AGG | + | chr7.3:29340329-29340348 | MS.gene27700:intron | 70.0% | |
| GATGCAGGACCTGGGTGGGG+TGG | - | chr7.3:29340341-29340360 | None:intergenic | 70.0% | |
| TGCAGGACCTGGGTGGGGTG+GGG | - | chr7.3:29340339-29340358 | None:intergenic | 70.0% | |
| CTCGCAACCCCCCACCGTGC+CGG | + | chr7.3:29342037-29342056 | MS.gene27700:intron | 75.0% | |
| ! | CCACCGTGCCGGAACGCCGC+CGG | + | chr7.3:29342048-29342067 | MS.gene27700:intron | 80.0% |
| ! | CGGCGGCGTTCCGGCACGGT+GGG | - | chr7.3:29342050-29342069 | None:intergenic | 80.0% |
| ! | CGGCGTTCCGGCACGGTGGG+GGG | - | chr7.3:29342047-29342066 | None:intergenic | 80.0% |
| ! | GCGGCGTTCCGGCACGGTGG+GGG | - | chr7.3:29342048-29342067 | None:intergenic | 80.0% |
| ! | GGCGGCGTTCCGGCACGGTG+GGG | - | chr7.3:29342049-29342068 | None:intergenic | 80.0% |
| ! | CCGGCGGCGTTCCGGCACGG+TGG | - | chr7.3:29342051-29342070 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 29338467 | 29344498 | 29338467 | ID=MS.gene27700 |
| chr7.3 | mRNA | 29338467 | 29344498 | 29338467 | ID=MS.gene27700.t1;Parent=MS.gene27700 |
| chr7.3 | exon | 29338467 | 29338621 | 29338467 | ID=MS.gene27700.t1.exon1;Parent=MS.gene27700.t1 |
| chr7.3 | CDS | 29338467 | 29338621 | 29338467 | ID=cds.MS.gene27700.t1;Parent=MS.gene27700.t1 |
| chr7.3 | exon | 29338748 | 29338831 | 29338748 | ID=MS.gene27700.t1.exon2;Parent=MS.gene27700.t1 |
| chr7.3 | CDS | 29338748 | 29338831 | 29338748 | ID=cds.MS.gene27700.t1;Parent=MS.gene27700.t1 |
| chr7.3 | exon | 29339537 | 29339597 | 29339537 | ID=MS.gene27700.t1.exon3;Parent=MS.gene27700.t1 |
| chr7.3 | CDS | 29339537 | 29339597 | 29339537 | ID=cds.MS.gene27700.t1;Parent=MS.gene27700.t1 |
| chr7.3 | exon | 29340865 | 29341099 | 29340865 | ID=MS.gene27700.t1.exon4;Parent=MS.gene27700.t1 |
| chr7.3 | CDS | 29340865 | 29341099 | 29340865 | ID=cds.MS.gene27700.t1;Parent=MS.gene27700.t1 |
| chr7.3 | exon | 29342501 | 29342739 | 29342501 | ID=MS.gene27700.t1.exon5;Parent=MS.gene27700.t1 |
| chr7.3 | CDS | 29342501 | 29342739 | 29342501 | ID=cds.MS.gene27700.t1;Parent=MS.gene27700.t1 |
| chr7.3 | exon | 29343079 | 29343330 | 29343079 | ID=MS.gene27700.t1.exon6;Parent=MS.gene27700.t1 |
| chr7.3 | CDS | 29343079 | 29343330 | 29343079 | ID=cds.MS.gene27700.t1;Parent=MS.gene27700.t1 |
| chr7.3 | exon | 29343414 | 29343594 | 29343414 | ID=MS.gene27700.t1.exon7;Parent=MS.gene27700.t1 |
| chr7.3 | CDS | 29343414 | 29343594 | 29343414 | ID=cds.MS.gene27700.t1;Parent=MS.gene27700.t1 |
| chr7.3 | exon | 29343909 | 29343997 | 29343909 | ID=MS.gene27700.t1.exon8;Parent=MS.gene27700.t1 |
| chr7.3 | CDS | 29343909 | 29343997 | 29343909 | ID=cds.MS.gene27700.t1;Parent=MS.gene27700.t1 |
| chr7.3 | exon | 29344079 | 29344152 | 29344079 | ID=MS.gene27700.t1.exon9;Parent=MS.gene27700.t1 |
| chr7.3 | CDS | 29344079 | 29344152 | 29344079 | ID=cds.MS.gene27700.t1;Parent=MS.gene27700.t1 |
| chr7.3 | exon | 29344420 | 29344498 | 29344420 | ID=MS.gene27700.t1.exon10;Parent=MS.gene27700.t1 |
| chr7.3 | CDS | 29344420 | 29344498 | 29344420 | ID=cds.MS.gene27700.t1;Parent=MS.gene27700.t1 |
| Gene Sequence |
| Protein sequence |
