Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52215.t1 | XP_003623902.2 | 99.5 | 426 | 2 | 0 | 60 | 485 | 98 | 523 | 2.20E-243 | 851.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52215.t1 | Q8RXK6 | 90.1 | 426 | 42 | 0 | 60 | 485 | 80 | 505 | 8.1e-226 | 784.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52215.t1 | G7L3K0 | 99.5 | 426 | 2 | 0 | 60 | 485 | 98 | 523 | 1.6e-243 | 851.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene52215 | 0.85133 | 9.52E-61 | -1.69E-46 |
| MS.gene049501 | MS.gene52215 | 0.802831 | 4.65E-49 | -1.69E-46 |
| MS.gene049585 | MS.gene52215 | 0.805444 | 1.33E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene52215 | 0.813797 | 2.13E-51 | -1.69E-46 |
| MS.gene049744 | MS.gene52215 | 0.821912 | 3.14E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene52215 | 0.813458 | 2.53E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene52215 | 0.807696 | 4.46E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene52215 | 0.83519 | 1.94E-56 | -1.69E-46 |
| MS.gene050657 | MS.gene52215 | 0.821467 | 3.98E-53 | -1.69E-46 |
| MS.gene051021 | MS.gene52215 | 0.809611 | 1.74E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene52215 | 0.82923 | 5.78E-55 | -1.69E-46 |
| MS.gene051198 | MS.gene52215 | 0.815154 | 1.07E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene52215 | 0.81486 | 1.24E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene52215 | 0.853818 | 1.86E-61 | -1.69E-46 |
| MS.gene051388 | MS.gene52215 | 0.804685 | 1.92E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene52215 | 0.816551 | 5.22E-52 | -1.69E-46 |
| MS.gene051700 | MS.gene52215 | 0.803431 | 3.50E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene52215 | 0.820465 | 6.76E-53 | -1.69E-46 |
| MS.gene051720 | MS.gene52215 | 0.825929 | 3.59E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene52215 | 0.840399 | 8.90E-58 | -1.69E-46 |
| MS.gene051800 | MS.gene52215 | 0.818936 | 1.51E-52 | -1.69E-46 |
| MS.gene052168 | MS.gene52215 | 0.81259 | 3.93E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene52215 | 0.800188 | 1.62E-48 | -1.69E-46 |
| MS.gene052311 | MS.gene52215 | 0.822372 | 2.45E-53 | -1.69E-46 |
| MS.gene052323 | MS.gene52215 | 0.805802 | 1.12E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene52215 | 0.812625 | 3.86E-51 | -1.69E-46 |
| MS.gene052514 | MS.gene52215 | 0.802862 | 4.59E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene52215 | 0.823254 | 1.53E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene52215 | 0.80646 | 8.14E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene52215 | 0.838065 | 3.59E-57 | -1.69E-46 |
| MS.gene052665 | MS.gene52215 | 0.802532 | 5.37E-49 | -1.69E-46 |
| MS.gene052732 | MS.gene52215 | 0.81388 | 2.05E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene52215 | 0.807614 | 4.64E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene52215 | 0.847528 | 1.09E-59 | -1.69E-46 |
| MS.gene053144 | MS.gene52215 | 0.854869 | 9.23E-62 | -1.69E-46 |
| MS.gene053226 | MS.gene52215 | 0.826537 | 2.57E-54 | -1.69E-46 |
| MS.gene053621 | MS.gene52215 | 0.827564 | 1.46E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene52215 | 0.805148 | 1.53E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene52215 | 0.802002 | 6.90E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene52215 | 0.865773 | 4.63E-65 | -1.69E-46 |
| MS.gene05462 | MS.gene52215 | 0.804587 | 2.01E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene52215 | 0.826273 | 2.97E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene52215 | 0.800014 | 1.76E-48 | -1.69E-46 |
| MS.gene054991 | MS.gene52215 | 0.806125 | 9.57E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene52215 | 0.871509 | 6.47E-67 | -1.69E-46 |
| MS.gene055466 | MS.gene52215 | 0.860935 | 1.46E-63 | -1.69E-46 |
| MS.gene055467 | MS.gene52215 | 0.823632 | 1.25E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene52215 | 0.838168 | 3.38E-57 | -1.69E-46 |
| MS.gene055469 | MS.gene52215 | 0.86336 | 2.63E-64 | -1.69E-46 |
| MS.gene055513 | MS.gene52215 | 0.830436 | 2.94E-55 | -1.69E-46 |
| MS.gene055537 | MS.gene52215 | 0.84141 | 4.83E-58 | -1.69E-46 |
| MS.gene055580 | MS.gene52215 | -0.835242 | 1.88E-56 | -1.69E-46 |
| MS.gene055778 | MS.gene52215 | 0.822404 | 2.41E-53 | -1.69E-46 |
| MS.gene055864 | MS.gene52215 | 0.828072 | 1.10E-54 | -1.69E-46 |
| MS.gene056043 | MS.gene52215 | -0.816633 | 5.00E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene52215 | 0.802619 | 5.15E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene52215 | 0.815085 | 1.11E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene52215 | 0.812179 | 4.83E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene52215 | 0.823586 | 1.28E-53 | -1.69E-46 |
| MS.gene056507 | MS.gene52215 | 0.851089 | 1.11E-60 | -1.69E-46 |
| MS.gene05686 | MS.gene52215 | 0.802459 | 5.55E-49 | -1.69E-46 |
| MS.gene057294 | MS.gene52215 | 0.830551 | 2.76E-55 | -1.69E-46 |
| MS.gene057869 | MS.gene52215 | 0.810972 | 8.84E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene52215 | 0.823782 | 1.15E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene52215 | 0.840211 | 9.97E-58 | -1.69E-46 |
| MS.gene058087 | MS.gene52215 | 0.820437 | 6.86E-53 | -1.69E-46 |
| MS.gene058339 | MS.gene52215 | 0.803665 | 3.13E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene52215 | 0.811097 | 8.30E-51 | -1.69E-46 |
| MS.gene058649 | MS.gene52215 | 0.829492 | 4.99E-55 | -1.69E-46 |
| MS.gene058668 | MS.gene52215 | 0.855922 | 4.56E-62 | -1.69E-46 |
| MS.gene058919 | MS.gene52215 | 0.806909 | 6.54E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene52215 | 0.848763 | 4.98E-60 | -1.69E-46 |
| MS.gene059625 | MS.gene52215 | 0.8432 | 1.62E-58 | -1.69E-46 |
| MS.gene059725 | MS.gene52215 | 0.803861 | 2.85E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene52215 | 0.812622 | 3.86E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene52215 | 0.822734 | 2.02E-53 | -1.69E-46 |
| MS.gene060587 | MS.gene52215 | 0.8161 | 6.58E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene061314 | MS.gene52215 | PPI |
| MS.gene042577 | MS.gene52215 | PPI |
| MS.gene66954 | MS.gene52215 | PPI |
| MS.gene027145 | MS.gene52215 | PPI |
| MS.gene029703 | MS.gene52215 | PPI |
| MS.gene061312 | MS.gene52215 | PPI |
| MS.gene52215 | MS.gene61610 | PPI |
| MS.gene61608 | MS.gene52215 | PPI |
| MS.gene069842 | MS.gene52215 | PPI |
| MS.gene75367 | MS.gene52215 | PPI |
| MS.gene52215 | MS.gene061316 | PPI |
| MS.gene66606 | MS.gene52215 | PPI |
| MS.gene070777 | MS.gene52215 | PPI |
| MS.gene60217 | MS.gene52215 | PPI |
| MS.gene52215 | MS.gene026769 | PPI |
| MS.gene034071 | MS.gene52215 | PPI |
| MS.gene070779 | MS.gene52215 | PPI |
| MS.gene47393 | MS.gene52215 | PPI |
| MS.gene034969 | MS.gene52215 | PPI |
| MS.gene070781 | MS.gene52215 | PPI |
| MS.gene52215 | MS.gene051381 | PPI |
| MS.gene051382 | MS.gene52215 | PPI |
| MS.gene52215 | MS.gene66605 | PPI |
| MS.gene52215 | MS.gene61606 | PPI |
| MS.gene034072 | MS.gene52215 | PPI |
| MS.gene82680 | MS.gene52215 | PPI |
| MS.gene82661 | MS.gene52215 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52215.t1 | MTR_7g076820 | 90.512 | 527 | 4 | 4 | 1 | 485 | 1 | 523 | 0.0 | 956 |
| MS.gene52215.t1 | MTR_7g076830 | 85.524 | 525 | 27 | 4 | 1 | 485 | 1 | 516 | 0.0 | 875 |
| MS.gene52215.t1 | MTR_7g076800 | 96.984 | 431 | 13 | 0 | 55 | 485 | 84 | 514 | 0.0 | 867 |
| MS.gene52215.t1 | MTR_0915s0010 | 97.872 | 282 | 6 | 0 | 124 | 405 | 1 | 282 | 0.0 | 572 |
| MS.gene52215.t1 | MTR_2g438110 | 39.096 | 376 | 225 | 3 | 102 | 475 | 26 | 399 | 1.91e-92 | 287 |
| MS.gene52215.t1 | MTR_4g125970 | 39.691 | 388 | 221 | 3 | 101 | 475 | 19 | 406 | 1.58e-90 | 282 |
| MS.gene52215.t1 | MTR_2g039960 | 40.599 | 367 | 216 | 2 | 111 | 475 | 40 | 406 | 4.48e-90 | 281 |
| MS.gene52215.t1 | MTR_4g125970 | 39.691 | 388 | 221 | 3 | 101 | 475 | 36 | 423 | 5.72e-90 | 281 |
| MS.gene52215.t1 | MTR_2g099620 | 40.984 | 366 | 212 | 4 | 113 | 475 | 26 | 390 | 4.72e-88 | 275 |
| MS.gene52215.t1 | MTR_2g099620 | 40.984 | 366 | 212 | 4 | 113 | 475 | 42 | 406 | 5.16e-88 | 276 |
| MS.gene52215.t1 | MTR_8g018400 | 40.599 | 367 | 216 | 2 | 111 | 475 | 40 | 406 | 1.09e-87 | 275 |
| MS.gene52215.t1 | MTR_1g012420 | 39.153 | 378 | 222 | 6 | 113 | 483 | 48 | 424 | 1.31e-83 | 265 |
| MS.gene52215.t1 | MTR_3g107420 | 38.360 | 378 | 225 | 6 | 113 | 483 | 48 | 424 | 7.79e-82 | 260 |
| MS.gene52215.t1 | MTR_4g010565 | 38.624 | 378 | 224 | 6 | 113 | 483 | 125 | 501 | 1.78e-81 | 261 |
| MS.gene52215.t1 | MTR_7g056830 | 34.783 | 368 | 234 | 4 | 113 | 475 | 11 | 377 | 1.95e-66 | 220 |
| MS.gene52215.t1 | MTR_3g449250 | 34.383 | 381 | 237 | 5 | 105 | 475 | 83 | 460 | 9.65e-66 | 222 |
| MS.gene52215.t1 | MTR_6g082080 | 34.239 | 368 | 236 | 4 | 113 | 475 | 11 | 377 | 1.07e-65 | 218 |
| MS.gene52215.t1 | MTR_3g449250 | 34.383 | 381 | 237 | 5 | 105 | 475 | 83 | 460 | 2.06e-65 | 221 |
| MS.gene52215.t1 | MTR_4g134170 | 31.948 | 385 | 236 | 3 | 118 | 476 | 293 | 677 | 4.38e-63 | 218 |
| MS.gene52215.t1 | MTR_3g467550 | 32.440 | 373 | 234 | 5 | 113 | 468 | 118 | 489 | 3.27e-62 | 212 |
| MS.gene52215.t1 | MTR_3g467550 | 32.345 | 371 | 233 | 5 | 115 | 468 | 89 | 458 | 1.39e-61 | 210 |
| MS.gene52215.t1 | MTR_1g061970 | 34.240 | 441 | 242 | 16 | 68 | 474 | 46 | 472 | 1.49e-61 | 209 |
| MS.gene52215.t1 | MTR_6g005550 | 32.663 | 398 | 249 | 7 | 95 | 476 | 142 | 536 | 5.10e-61 | 212 |
| MS.gene52215.t1 | MTR_6g005320 | 32.181 | 376 | 227 | 4 | 118 | 467 | 255 | 628 | 7.55e-61 | 211 |
| MS.gene52215.t1 | MTR_5g090120 | 32.540 | 378 | 240 | 6 | 109 | 475 | 78 | 451 | 9.82e-61 | 209 |
| MS.gene52215.t1 | MTR_2g032630 | 33.777 | 376 | 234 | 6 | 95 | 456 | 473 | 847 | 5.25e-59 | 210 |
| MS.gene52215.t1 | MTR_2g100230 | 32.162 | 370 | 235 | 6 | 113 | 471 | 102 | 466 | 6.80e-59 | 202 |
| MS.gene52215.t1 | MTR_3g049990 | 35.106 | 376 | 234 | 5 | 106 | 472 | 146 | 520 | 4.58e-58 | 205 |
| MS.gene52215.t1 | MTR_4g049910 | 34.010 | 394 | 220 | 15 | 108 | 474 | 51 | 431 | 6.04e-58 | 198 |
| MS.gene52215.t1 | MTR_4g079320 | 34.146 | 369 | 237 | 4 | 113 | 475 | 20 | 388 | 9.32e-58 | 204 |
| MS.gene52215.t1 | MTR_5g027840 | 32.533 | 375 | 228 | 6 | 95 | 454 | 94 | 458 | 5.38e-57 | 197 |
| MS.gene52215.t1 | MTR_2g041140 | 34.545 | 385 | 229 | 7 | 104 | 472 | 133 | 510 | 5.88e-57 | 201 |
| MS.gene52215.t1 | MTR_2g007000 | 32.857 | 350 | 223 | 5 | 118 | 456 | 510 | 858 | 2.17e-54 | 197 |
| MS.gene52215.t1 | MTR_4g105100 | 30.978 | 368 | 236 | 6 | 113 | 468 | 208 | 569 | 2.94e-54 | 192 |
| MS.gene52215.t1 | MTR_2g055850 | 34.218 | 339 | 213 | 4 | 113 | 441 | 92 | 430 | 5.29e-54 | 190 |
| MS.gene52215.t1 | MTR_8g018370 | 33.432 | 338 | 198 | 5 | 142 | 475 | 3 | 317 | 1.04e-53 | 183 |
| MS.gene52215.t1 | MTR_2g066050 | 31.675 | 382 | 244 | 6 | 103 | 474 | 48 | 422 | 1.13e-53 | 188 |
| MS.gene52215.t1 | MTR_8g027775 | 33.058 | 363 | 214 | 8 | 123 | 460 | 113 | 471 | 2.16e-53 | 189 |
| MS.gene52215.t1 | MTR_8g027780 | 32.804 | 378 | 224 | 9 | 123 | 475 | 117 | 489 | 3.97e-53 | 188 |
| MS.gene52215.t1 | MTR_4g114120 | 28.601 | 486 | 302 | 11 | 26 | 484 | 70 | 537 | 5.91e-52 | 187 |
| MS.gene52215.t1 | MTR_7g109720 | 31.092 | 357 | 234 | 6 | 113 | 458 | 233 | 588 | 1.34e-51 | 187 |
| MS.gene52215.t1 | MTR_1g054630 | 31.492 | 362 | 224 | 8 | 111 | 449 | 153 | 513 | 1.30e-50 | 182 |
| MS.gene52215.t1 | MTR_4g112340 | 33.232 | 328 | 208 | 5 | 125 | 441 | 110 | 437 | 1.80e-50 | 181 |
| MS.gene52215.t1 | MTR_8g027770 | 33.609 | 363 | 212 | 7 | 123 | 460 | 212 | 570 | 2.15e-50 | 182 |
| MS.gene52215.t1 | MTR_3g467550 | 31.928 | 332 | 208 | 5 | 113 | 427 | 118 | 448 | 5.22e-50 | 177 |
| MS.gene52215.t1 | MTR_1g026830 | 29.471 | 397 | 260 | 7 | 103 | 482 | 139 | 532 | 5.83e-50 | 180 |
| MS.gene52215.t1 | MTR_1g046570 | 29.949 | 394 | 237 | 8 | 127 | 482 | 6 | 398 | 6.23e-50 | 176 |
| MS.gene52215.t1 | MTR_1g095810 | 28.756 | 386 | 258 | 5 | 113 | 482 | 146 | 530 | 6.52e-50 | 180 |
| MS.gene52215.t1 | MTR_3g083690 | 29.620 | 395 | 251 | 8 | 111 | 480 | 144 | 536 | 2.88e-49 | 178 |
| MS.gene52215.t1 | MTR_6g033070 | 31.198 | 359 | 229 | 6 | 113 | 457 | 141 | 495 | 3.73e-47 | 171 |
| MS.gene52215.t1 | MTR_8g097000 | 33.515 | 367 | 215 | 8 | 130 | 475 | 306 | 664 | 6.07e-47 | 174 |
| MS.gene52215.t1 | MTR_6g039840 | 30.263 | 380 | 237 | 7 | 113 | 467 | 111 | 487 | 2.58e-44 | 166 |
| MS.gene52215.t1 | MTR_7g100820 | 30.495 | 364 | 245 | 6 | 122 | 480 | 144 | 504 | 8.31e-44 | 163 |
| MS.gene52215.t1 | MTR_8g027780 | 32.622 | 328 | 192 | 8 | 123 | 425 | 117 | 440 | 3.33e-43 | 159 |
| MS.gene52215.t1 | MTR_5g092560 | 32.822 | 326 | 204 | 6 | 137 | 449 | 101 | 424 | 5.14e-42 | 159 |
| MS.gene52215.t1 | MTR_6g056080 | 30.130 | 385 | 239 | 9 | 111 | 474 | 102 | 477 | 1.20e-40 | 155 |
| MS.gene52215.t1 | MTR_1g102410 | 29.676 | 401 | 236 | 8 | 111 | 474 | 43 | 434 | 2.92e-40 | 154 |
| MS.gene52215.t1 | MTR_3g071620 | 30.000 | 360 | 224 | 7 | 118 | 449 | 22 | 381 | 4.58e-40 | 152 |
| MS.gene52215.t1 | MTR_7g057250 | 25.234 | 428 | 242 | 8 | 103 | 453 | 154 | 580 | 5.23e-39 | 151 |
| MS.gene52215.t1 | MTR_4g105100 | 29.375 | 320 | 211 | 5 | 113 | 423 | 208 | 521 | 6.30e-39 | 148 |
| MS.gene52215.t1 | MTR_4g068990 | 32.822 | 326 | 203 | 7 | 137 | 449 | 101 | 423 | 7.86e-39 | 150 |
| MS.gene52215.t1 | MTR_1g083130 | 28.354 | 395 | 232 | 7 | 113 | 456 | 27 | 421 | 1.78e-37 | 145 |
| MS.gene52215.t1 | MTR_2g063080 | 23.899 | 477 | 279 | 9 | 70 | 467 | 54 | 525 | 1.92e-36 | 142 |
| MS.gene52215.t1 | MTR_6g039840 | 31.353 | 303 | 189 | 6 | 181 | 467 | 12 | 311 | 3.58e-35 | 137 |
| MS.gene52215.t1 | MTR_3g107420 | 35.678 | 199 | 123 | 4 | 113 | 307 | 48 | 245 | 2.90e-33 | 128 |
| MS.gene52215.t1 | MTR_4g059460 | 26.700 | 397 | 211 | 8 | 130 | 446 | 63 | 459 | 9.82e-33 | 132 |
| MS.gene52215.t1 | MTR_2g043360 | 26.196 | 397 | 213 | 8 | 130 | 446 | 60 | 456 | 2.33e-32 | 130 |
| MS.gene52215.t1 | MTR_5g069330 | 26.053 | 380 | 271 | 6 | 113 | 485 | 4 | 380 | 1.89e-31 | 125 |
| MS.gene52215.t1 | MTR_5g069330 | 26.053 | 380 | 271 | 6 | 113 | 485 | 8 | 384 | 2.17e-31 | 125 |
| MS.gene52215.t1 | MTR_4g112320 | 30.315 | 254 | 170 | 4 | 195 | 441 | 2 | 255 | 4.39e-31 | 124 |
| MS.gene52215.t1 | MTR_3g118120 | 29.132 | 357 | 213 | 12 | 122 | 441 | 142 | 495 | 1.30e-30 | 125 |
| MS.gene52215.t1 | MTR_5g077690 | 26.263 | 396 | 223 | 11 | 150 | 476 | 71 | 466 | 6.56e-28 | 116 |
| MS.gene52215.t1 | MTR_4g077370 | 29.694 | 229 | 158 | 1 | 80 | 305 | 218 | 446 | 8.83e-26 | 110 |
| MS.gene52215.t1 | MTR_4g077370 | 30.093 | 216 | 124 | 4 | 113 | 320 | 3 | 199 | 9.83e-18 | 85.9 |
| MS.gene52215.t1 | MTR_8g031340 | 88.462 | 52 | 6 | 0 | 211 | 262 | 1 | 52 | 1.51e-24 | 98.6 |
| MS.gene52215.t1 | MTR_1g022305 | 26.074 | 349 | 189 | 12 | 134 | 477 | 26 | 310 | 4.75e-24 | 105 |
| MS.gene52215.t1 | MTR_4g131750 | 24.297 | 391 | 260 | 10 | 121 | 476 | 91 | 480 | 6.80e-24 | 104 |
| MS.gene52215.t1 | MTR_5g092560 | 32.039 | 206 | 131 | 4 | 253 | 449 | 8 | 213 | 6.86e-24 | 105 |
| MS.gene52215.t1 | MTR_4g068990 | 32.524 | 206 | 129 | 5 | 253 | 449 | 8 | 212 | 1.12e-23 | 104 |
| MS.gene52215.t1 | MTR_0427s0010 | 32.394 | 213 | 105 | 6 | 279 | 474 | 16 | 206 | 5.47e-22 | 94.7 |
| MS.gene52215.t1 | MTR_4g459350 | 31.050 | 219 | 117 | 6 | 130 | 316 | 60 | 276 | 6.56e-21 | 92.8 |
| MS.gene52215.t1 | MTR_2g042440 | 25.691 | 362 | 220 | 11 | 108 | 441 | 15 | 355 | 4.73e-18 | 87.8 |
| MS.gene52215.t1 | MTR_2g042440 | 25.691 | 362 | 220 | 11 | 108 | 441 | 15 | 355 | 4.82e-18 | 87.8 |
| MS.gene52215.t1 | MTR_8g032230 | 34.646 | 127 | 81 | 2 | 121 | 245 | 18 | 144 | 1.55e-17 | 80.5 |
| MS.gene52215.t1 | MTR_8g062720 | 33.858 | 127 | 81 | 2 | 348 | 472 | 435 | 560 | 2.06e-14 | 76.3 |
| MS.gene52215.t1 | MTR_2g088350 | 86.486 | 37 | 5 | 0 | 406 | 442 | 144 | 180 | 3.77e-13 | 68.2 |
| MS.gene52215.t1 | MTR_2g006440 | 24.346 | 382 | 244 | 12 | 95 | 456 | 380 | 736 | 5.63e-13 | 72.0 |
| MS.gene52215.t1 | MTR_1g009617 | 31.481 | 108 | 71 | 2 | 371 | 477 | 167 | 272 | 1.86e-12 | 69.3 |
| MS.gene52215.t1 | MTR_8g018330 | 27.329 | 161 | 105 | 4 | 322 | 475 | 15 | 170 | 2.02e-12 | 65.9 |
| MS.gene52215.t1 | MTR_1g023070 | 29.907 | 107 | 72 | 2 | 372 | 477 | 27 | 131 | 3.27e-12 | 65.5 |
| MS.gene52215.t1 | MTR_1g023070 | 29.907 | 107 | 72 | 2 | 372 | 477 | 27 | 131 | 8.05e-12 | 65.1 |
| MS.gene52215.t1 | MTR_8g018350 | 26.543 | 162 | 104 | 5 | 322 | 475 | 15 | 169 | 2.46e-11 | 62.8 |
| MS.gene52215.t1 | MTR_8g079462 | 24.621 | 264 | 154 | 7 | 258 | 476 | 19 | 282 | 3.06e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52215.t1 | AT4G00660 | 79.070 | 516 | 62 | 4 | 4 | 485 | 2 | 505 | 0.0 | 819 |
| MS.gene52215.t1 | AT4G00660 | 79.070 | 516 | 62 | 4 | 4 | 485 | 2 | 505 | 0.0 | 819 |
| MS.gene52215.t1 | AT2G45810 | 84.954 | 432 | 62 | 2 | 55 | 485 | 99 | 528 | 0.0 | 762 |
| MS.gene52215.t1 | AT3G61240 | 74.900 | 502 | 102 | 5 | 3 | 485 | 2 | 498 | 0.0 | 748 |
| MS.gene52215.t1 | AT3G61240 | 74.900 | 502 | 102 | 5 | 3 | 485 | 2 | 498 | 0.0 | 748 |
| MS.gene52215.t1 | AT3G19760 | 39.452 | 365 | 219 | 2 | 113 | 475 | 37 | 401 | 1.05e-94 | 293 |
| MS.gene52215.t1 | AT1G51380 | 38.133 | 375 | 226 | 3 | 107 | 475 | 14 | 388 | 3.06e-91 | 283 |
| MS.gene52215.t1 | AT3G13920 | 41.096 | 365 | 213 | 2 | 113 | 475 | 41 | 405 | 8.42e-91 | 283 |
| MS.gene52215.t1 | AT3G13920 | 41.096 | 365 | 213 | 2 | 113 | 475 | 31 | 395 | 1.49e-90 | 282 |
| MS.gene52215.t1 | AT1G72730 | 40.327 | 367 | 217 | 2 | 111 | 475 | 41 | 407 | 6.74e-90 | 280 |
| MS.gene52215.t1 | AT1G54270 | 40.984 | 366 | 212 | 4 | 113 | 475 | 41 | 405 | 1.11e-88 | 277 |
| MS.gene52215.t1 | AT3G13920 | 42.486 | 346 | 197 | 2 | 113 | 456 | 41 | 386 | 1.33e-88 | 277 |
| MS.gene52215.t1 | AT3G13920 | 42.486 | 346 | 197 | 2 | 113 | 456 | 45 | 390 | 1.80e-88 | 277 |
| MS.gene52215.t1 | AT3G13920 | 40.896 | 357 | 206 | 3 | 124 | 475 | 44 | 400 | 1.25e-87 | 275 |
| MS.gene52215.t1 | AT1G54270 | 40.782 | 358 | 205 | 5 | 124 | 475 | 44 | 400 | 1.28e-85 | 269 |
| MS.gene52215.t1 | AT5G11170 | 36.725 | 403 | 243 | 7 | 92 | 483 | 23 | 424 | 3.53e-81 | 258 |
| MS.gene52215.t1 | AT5G11200 | 36.725 | 403 | 243 | 7 | 92 | 483 | 23 | 424 | 3.53e-81 | 258 |
| MS.gene52215.t1 | AT5G11200 | 34.685 | 444 | 237 | 10 | 92 | 483 | 23 | 465 | 1.43e-73 | 240 |
| MS.gene52215.t1 | AT5G11200 | 33.333 | 462 | 237 | 10 | 92 | 483 | 23 | 483 | 9.30e-71 | 233 |
| MS.gene52215.t1 | AT5G11170 | 36.657 | 341 | 208 | 6 | 150 | 483 | 2 | 341 | 4.50e-67 | 219 |
| MS.gene52215.t1 | AT5G60990 | 33.073 | 384 | 243 | 4 | 113 | 482 | 11 | 394 | 6.12e-66 | 219 |
| MS.gene52215.t1 | AT5G14610 | 33.673 | 392 | 245 | 7 | 101 | 478 | 145 | 535 | 2.06e-63 | 218 |
| MS.gene52215.t1 | AT5G14610 | 33.673 | 392 | 245 | 7 | 101 | 478 | 145 | 535 | 2.28e-63 | 217 |
| MS.gene52215.t1 | AT5G14610 | 33.673 | 392 | 245 | 7 | 101 | 478 | 153 | 543 | 2.55e-63 | 217 |
| MS.gene52215.t1 | AT5G63120 | 33.081 | 396 | 242 | 8 | 100 | 476 | 147 | 538 | 3.63e-63 | 216 |
| MS.gene52215.t1 | AT2G33730 | 31.538 | 390 | 241 | 4 | 113 | 476 | 315 | 704 | 4.68e-62 | 215 |
| MS.gene52215.t1 | AT3G06480 | 33.503 | 394 | 246 | 6 | 100 | 478 | 417 | 809 | 1.88e-61 | 217 |
| MS.gene52215.t1 | AT3G22310 | 32.796 | 372 | 235 | 6 | 115 | 475 | 120 | 487 | 2.09e-61 | 211 |
| MS.gene52215.t1 | AT3G22310 | 32.796 | 372 | 235 | 6 | 115 | 475 | 120 | 487 | 2.76e-61 | 211 |
| MS.gene52215.t1 | AT3G01540 | 32.653 | 392 | 249 | 7 | 101 | 478 | 142 | 532 | 4.38e-61 | 211 |
| MS.gene52215.t1 | AT3G01540 | 32.653 | 392 | 249 | 7 | 101 | 478 | 142 | 532 | 4.55e-61 | 211 |
| MS.gene52215.t1 | AT3G01540 | 32.653 | 392 | 249 | 7 | 101 | 478 | 142 | 532 | 4.55e-61 | 211 |
| MS.gene52215.t1 | AT3G01540 | 32.653 | 392 | 249 | 7 | 101 | 478 | 142 | 532 | 4.55e-61 | 211 |
| MS.gene52215.t1 | AT5G14610 | 34.262 | 359 | 227 | 6 | 126 | 476 | 45 | 402 | 1.46e-60 | 207 |
| MS.gene52215.t1 | AT5G14610 | 34.262 | 359 | 227 | 6 | 126 | 476 | 45 | 402 | 1.46e-60 | 207 |
| MS.gene52215.t1 | AT1G16280 | 32.242 | 397 | 248 | 6 | 94 | 482 | 50 | 433 | 2.54e-60 | 206 |
| MS.gene52215.t1 | AT1G55150 | 31.351 | 370 | 238 | 6 | 113 | 471 | 106 | 470 | 3.19e-60 | 206 |
| MS.gene52215.t1 | AT3G22330 | 31.421 | 366 | 236 | 6 | 121 | 475 | 114 | 475 | 3.42e-60 | 208 |
| MS.gene52215.t1 | AT5G14610 | 34.262 | 359 | 227 | 6 | 126 | 476 | 244 | 601 | 1.10e-59 | 209 |
| MS.gene52215.t1 | AT1G55150 | 31.351 | 370 | 238 | 6 | 113 | 471 | 131 | 495 | 1.36e-59 | 204 |
| MS.gene52215.t1 | AT1G31970 | 35.174 | 344 | 200 | 5 | 129 | 453 | 132 | 471 | 2.29e-58 | 201 |
| MS.gene52215.t1 | AT1G77030 | 35.278 | 360 | 207 | 7 | 113 | 456 | 30 | 379 | 1.38e-55 | 199 |
| MS.gene52215.t1 | AT1G28180 | 31.214 | 346 | 226 | 5 | 141 | 476 | 3 | 346 | 1.92e-55 | 189 |
| MS.gene52215.t1 | AT1G51380 | 37.786 | 262 | 157 | 3 | 107 | 362 | 14 | 275 | 2.22e-55 | 186 |
| MS.gene52215.t1 | AT4G16630 | 32.990 | 388 | 238 | 7 | 100 | 472 | 156 | 536 | 1.01e-54 | 196 |
| MS.gene52215.t1 | AT1G20920 | 31.714 | 350 | 227 | 5 | 118 | 456 | 198 | 546 | 1.34e-54 | 196 |
| MS.gene52215.t1 | AT3G53110 | 32.170 | 401 | 251 | 10 | 104 | 483 | 84 | 484 | 2.05e-54 | 190 |
| MS.gene52215.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 131 | 456 | 549 | 884 | 2.82e-54 | 197 |
| MS.gene52215.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 131 | 456 | 549 | 884 | 2.82e-54 | 197 |
| MS.gene52215.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 131 | 456 | 549 | 884 | 2.82e-54 | 197 |
| MS.gene52215.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 131 | 456 | 549 | 884 | 2.82e-54 | 197 |
| MS.gene52215.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 131 | 456 | 549 | 884 | 2.82e-54 | 197 |
| MS.gene52215.t1 | AT1G20920 | 32.344 | 337 | 216 | 5 | 131 | 456 | 549 | 884 | 2.82e-54 | 197 |
| MS.gene52215.t1 | AT5G26742 | 32.134 | 389 | 245 | 6 | 104 | 476 | 93 | 478 | 3.89e-54 | 194 |
| MS.gene52215.t1 | AT5G26742 | 32.134 | 389 | 245 | 6 | 104 | 476 | 93 | 478 | 3.93e-54 | 194 |
| MS.gene52215.t1 | AT5G08610 | 33.002 | 403 | 247 | 9 | 101 | 482 | 373 | 773 | 6.88e-54 | 194 |
| MS.gene52215.t1 | AT3G58570 | 33.149 | 362 | 218 | 7 | 111 | 449 | 146 | 506 | 1.36e-53 | 191 |
| MS.gene52215.t1 | AT3G18600 | 35.380 | 342 | 203 | 8 | 113 | 441 | 91 | 427 | 1.59e-53 | 189 |
| MS.gene52215.t1 | AT5G63630 | 34.026 | 385 | 231 | 9 | 96 | 458 | 40 | 423 | 9.22e-53 | 186 |
| MS.gene52215.t1 | AT5G08620 | 32.536 | 418 | 254 | 10 | 91 | 482 | 56 | 471 | 1.42e-52 | 186 |
| MS.gene52215.t1 | AT5G26742 | 33.237 | 346 | 214 | 5 | 145 | 476 | 43 | 385 | 1.65e-52 | 188 |
| MS.gene52215.t1 | AT5G63630 | 34.026 | 385 | 231 | 9 | 96 | 458 | 234 | 617 | 5.86e-52 | 187 |
| MS.gene52215.t1 | AT3G58510 | 31.282 | 390 | 244 | 9 | 111 | 478 | 151 | 538 | 2.03e-51 | 184 |
| MS.gene52215.t1 | AT3G58510 | 31.282 | 390 | 244 | 9 | 111 | 478 | 151 | 538 | 2.03e-51 | 184 |
| MS.gene52215.t1 | AT3G58510 | 31.282 | 390 | 244 | 9 | 111 | 478 | 151 | 538 | 2.03e-51 | 184 |
| MS.gene52215.t1 | AT5G65900 | 34.320 | 338 | 213 | 4 | 113 | 441 | 156 | 493 | 6.38e-51 | 183 |
| MS.gene52215.t1 | AT3G02065 | 33.149 | 362 | 226 | 8 | 113 | 461 | 112 | 470 | 8.13e-51 | 181 |
| MS.gene52215.t1 | AT3G02065 | 33.149 | 362 | 226 | 8 | 113 | 461 | 112 | 470 | 8.13e-51 | 181 |
| MS.gene52215.t1 | AT2G42520 | 31.633 | 392 | 242 | 10 | 111 | 478 | 159 | 548 | 9.35e-51 | 183 |
| MS.gene52215.t1 | AT2G42520 | 31.633 | 392 | 242 | 10 | 111 | 478 | 159 | 548 | 9.35e-51 | 183 |
| MS.gene52215.t1 | AT2G42520 | 31.633 | 392 | 242 | 10 | 111 | 478 | 159 | 548 | 9.35e-51 | 183 |
| MS.gene52215.t1 | AT5G51280 | 27.193 | 456 | 301 | 8 | 54 | 480 | 77 | 530 | 3.58e-49 | 178 |
| MS.gene52215.t1 | AT4G33370 | 27.739 | 429 | 280 | 7 | 80 | 480 | 55 | 481 | 6.57e-49 | 176 |
| MS.gene52215.t1 | AT5G14610 | 32.659 | 346 | 218 | 7 | 101 | 432 | 153 | 497 | 8.51e-49 | 175 |
| MS.gene52215.t1 | AT2G47330 | 31.092 | 357 | 234 | 7 | 113 | 458 | 230 | 585 | 1.01e-48 | 179 |
| MS.gene52215.t1 | AT3G06480 | 32.344 | 337 | 212 | 6 | 100 | 421 | 417 | 752 | 1.20e-46 | 173 |
| MS.gene52215.t1 | AT3G02065 | 33.134 | 335 | 208 | 8 | 140 | 461 | 2 | 333 | 2.68e-46 | 165 |
| MS.gene52215.t1 | AT5G63120 | 31.915 | 329 | 207 | 5 | 100 | 412 | 147 | 474 | 3.19e-46 | 167 |
| MS.gene52215.t1 | AT5G63120 | 31.915 | 329 | 207 | 5 | 100 | 412 | 147 | 474 | 4.72e-46 | 167 |
| MS.gene52215.t1 | AT5G63120 | 31.915 | 329 | 207 | 5 | 100 | 412 | 147 | 474 | 4.72e-46 | 167 |
| MS.gene52215.t1 | AT5G63120 | 31.915 | 329 | 207 | 5 | 100 | 412 | 147 | 474 | 4.72e-46 | 167 |
| MS.gene52215.t1 | AT3G09620 | 31.250 | 336 | 192 | 8 | 131 | 456 | 416 | 722 | 1.59e-45 | 171 |
| MS.gene52215.t1 | AT3G09620 | 31.250 | 336 | 192 | 8 | 131 | 456 | 417 | 723 | 1.60e-45 | 171 |
| MS.gene52215.t1 | AT3G09720 | 31.215 | 362 | 241 | 6 | 122 | 478 | 152 | 510 | 6.14e-43 | 160 |
| MS.gene52215.t1 | AT3G09720 | 31.215 | 362 | 241 | 6 | 122 | 478 | 152 | 510 | 6.14e-43 | 160 |
| MS.gene52215.t1 | AT4G09730 | 29.211 | 380 | 241 | 8 | 113 | 467 | 114 | 490 | 9.24e-43 | 160 |
| MS.gene52215.t1 | AT1G63250 | 31.877 | 389 | 233 | 9 | 110 | 475 | 327 | 706 | 1.21e-42 | 162 |
| MS.gene52215.t1 | AT1G51380 | 34.274 | 248 | 146 | 5 | 108 | 343 | 15 | 257 | 1.25e-41 | 150 |
| MS.gene52215.t1 | AT5G54910 | 32.787 | 366 | 223 | 11 | 125 | 474 | 85 | 443 | 1.26e-41 | 158 |
| MS.gene52215.t1 | AT2G07750 | 31.877 | 389 | 233 | 9 | 110 | 475 | 374 | 753 | 1.27e-41 | 159 |
| MS.gene52215.t1 | AT1G51380 | 34.274 | 248 | 146 | 5 | 108 | 343 | 15 | 257 | 1.40e-41 | 150 |
| MS.gene52215.t1 | AT1G12770 | 25.917 | 436 | 251 | 9 | 110 | 484 | 109 | 533 | 3.86e-41 | 155 |
| MS.gene52215.t1 | AT1G12770 | 25.917 | 436 | 251 | 9 | 110 | 484 | 109 | 533 | 3.86e-41 | 155 |
| MS.gene52215.t1 | AT1G71370 | 30.595 | 353 | 219 | 8 | 118 | 449 | 23 | 370 | 9.24e-41 | 154 |
| MS.gene52215.t1 | AT5G62190 | 29.899 | 398 | 241 | 10 | 102 | 474 | 87 | 471 | 1.59e-39 | 152 |
| MS.gene52215.t1 | AT5G05450 | 28.852 | 357 | 229 | 7 | 118 | 449 | 23 | 379 | 1.83e-38 | 148 |
| MS.gene52215.t1 | AT3G06980 | 26.959 | 434 | 266 | 14 | 48 | 441 | 315 | 737 | 1.72e-34 | 137 |
| MS.gene52215.t1 | AT3G16840 | 24.537 | 432 | 249 | 8 | 122 | 477 | 202 | 632 | 2.72e-34 | 137 |
| MS.gene52215.t1 | AT3G16840 | 24.537 | 432 | 249 | 8 | 122 | 477 | 201 | 631 | 3.27e-34 | 137 |
| MS.gene52215.t1 | AT4G34910 | 28.052 | 385 | 218 | 8 | 113 | 441 | 48 | 429 | 2.76e-33 | 133 |
| MS.gene52215.t1 | AT2G40700 | 26.058 | 449 | 242 | 12 | 90 | 449 | 4 | 451 | 7.75e-33 | 132 |
| MS.gene52215.t1 | AT1G71280 | 29.836 | 305 | 186 | 7 | 118 | 414 | 24 | 308 | 1.22e-29 | 119 |
| MS.gene52215.t1 | AT1G71280 | 29.545 | 308 | 189 | 7 | 118 | 417 | 24 | 311 | 2.62e-29 | 120 |
| MS.gene52215.t1 | AT5G19210 | 27.225 | 382 | 247 | 7 | 117 | 467 | 82 | 463 | 3.59e-29 | 120 |
| MS.gene52215.t1 | AT4G15850 | 25.248 | 404 | 217 | 14 | 150 | 476 | 74 | 469 | 1.09e-23 | 104 |
| MS.gene52215.t1 | AT4G35740 | 26.748 | 329 | 196 | 10 | 138 | 441 | 41 | 349 | 2.32e-14 | 76.3 |
| MS.gene52215.t1 | AT1G59990 | 33.333 | 108 | 71 | 1 | 350 | 457 | 426 | 532 | 2.33e-13 | 72.8 |
| MS.gene52215.t1 | AT1G59990 | 33.333 | 108 | 71 | 1 | 350 | 457 | 426 | 532 | 2.44e-13 | 72.8 |
| MS.gene52215.t1 | AT1G28180 | 30.702 | 114 | 71 | 2 | 141 | 246 | 3 | 116 | 2.60e-13 | 67.0 |
Find 126 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACGCATAATGTCATCTTTC+AGG | 0.227927 | 7.4:-28917431 | None:intergenic |
| TTGAAGTCCTTTACAGTAAC+AGG | 0.265203 | 7.4:-28918001 | None:intergenic |
| AGCATTCCAATTGCCCTTAC+TGG | 0.269182 | 7.4:+28915311 | MS.gene52215:CDS |
| TTCAAGTTGTTCGCATTGTT+CGG | 0.277226 | 7.4:-28912361 | None:intergenic |
| CAATTGGAATGCTTTCTTCT+TGG | 0.291211 | 7.4:-28915301 | None:intergenic |
| GTTGGTCGATCCGGAAGGTT+TGG | 0.291500 | 7.4:+28918899 | MS.gene52215:CDS |
| CTGTGATGCAGTTGTTATAC+TGG | 0.305052 | 7.4:+28917311 | MS.gene52215:intron |
| TCTATTGAAGGCTTGAACTC+TGG | 0.317516 | 7.4:-28917920 | None:intergenic |
| CAGATATGTTTCTGAGTTCT+TGG | 0.318609 | 7.4:-28918789 | None:intergenic |
| AATATTGTGTAATACCCTTC+AGG | 0.328307 | 7.4:-28918075 | None:intergenic |
| GCAAGATCCAATATTCTTCC+TGG | 0.337628 | 7.4:-28917486 | None:intergenic |
| TCCATAAGGTTAATGATATA+CGG | 0.345859 | 7.4:-28918043 | None:intergenic |
| GCCGTATATCATTAACCTTA+TGG | 0.349321 | 7.4:+28918042 | MS.gene52215:CDS |
| TTTGAAGCGTGAGCTGCTAA+TGG | 0.357889 | 7.4:+28915241 | MS.gene52215:CDS |
| ACTGGTTCCAACACGAGAAT+TGG | 0.362399 | 7.4:+28917329 | MS.gene52215:CDS |
| TCAAGTTGTTCGCATTGTTC+GGG | 0.365127 | 7.4:-28912360 | None:intergenic |
| ACCAAGGTGCCCAAACCTTC+CGG | 0.382733 | 7.4:-28918909 | None:intergenic |
| AGTGGTAGTGGTGGTGGTGG+TGG | 0.386147 | 7.4:+28912325 | MS.gene52215:CDS |
| CAGATTGAAGCGATCCTCAT+AGG | 0.387789 | 7.4:-28918951 | None:intergenic |
| ATCGATTATCTTCTGCAATT+CGG | 0.395509 | 7.4:+28918251 | MS.gene52215:CDS |
| TGGTACTCCAGGAAGAATAT+TGG | 0.406555 | 7.4:+28917479 | MS.gene52215:CDS |
| CCTTGGTTTAGCAGTGAACT+TGG | 0.408298 | 7.4:+28918925 | MS.gene52215:CDS |
| GCATTTACAAATTCAAGTTA+TGG | 0.408398 | 7.4:+28917389 | MS.gene52215:CDS |
| TTGGTCGATCCGGAAGGTTT+GGG | 0.418783 | 7.4:+28918900 | MS.gene52215:CDS |
| GGATATATCCACCTGGGATT+GGG | 0.418958 | 7.4:+28912281 | MS.gene52215:CDS |
| TTGAAGCGTGAGCTGCTAAT+GGG | 0.420240 | 7.4:+28915242 | MS.gene52215:CDS |
| CAACCTGTTCATCTGCTTGT+TGG | 0.422581 | 7.4:+28917459 | MS.gene52215:CDS |
| GAAATGTAGCTGAAAACAAT+AGG | 0.425303 | 7.4:-28917979 | None:intergenic |
| TCACTGCCAGTAAGGGCAAT+TGG | 0.428644 | 7.4:-28915317 | None:intergenic |
| TGCATTTAGCATTCCTGCAT+TGG | 0.429066 | 7.4:+28915379 | MS.gene52215:CDS |
| GGGATATATCCACCTGGGAT+TGG | 0.430641 | 7.4:+28912280 | MS.gene52215:CDS |
| CATCTGCTTGTTGGTACTCC+AGG | 0.432866 | 7.4:+28917468 | MS.gene52215:CDS |
| CTGAAAACAATAGGATTTGA+CGG | 0.434306 | 7.4:-28917970 | None:intergenic |
| AATATTGGATCTTGCAAAGA+AGG | 0.436611 | 7.4:+28917494 | MS.gene52215:CDS |
| TGAATCAGCTGCTCTATTGA+AGG | 0.436678 | 7.4:-28917932 | None:intergenic |
| CTATTGAAGGCTTGAACTCT+GGG | 0.438992 | 7.4:-28917919 | None:intergenic |
| TAATAACAACATTCACTGCT+TGG | 0.441559 | 7.4:-28918754 | None:intergenic |
| AGATATGTTTCTGAGTTCTT+GGG | 0.444541 | 7.4:-28918788 | None:intergenic |
| GAATGCTTTCTTCTTGGATA+GGG | 0.449165 | 7.4:-28915295 | None:intergenic |
| CTGGCAGTGACATTCTTGCT+AGG | 0.452575 | 7.4:+28915330 | MS.gene52215:CDS |
| CCAGGACGTGACAGCAACTA+AGG | 0.455382 | 7.4:+28915196 | MS.gene52215:intron |
| GGAATGCTTTCTTCTTGGAT+AGG | 0.455771 | 7.4:-28915296 | None:intergenic |
| GCTAAGAAAATCACAGAACT+AGG | 0.459240 | 7.4:+28918294 | MS.gene52215:CDS |
| AATAGGATTTGACGGTTTGA+AGG | 0.459295 | 7.4:-28917962 | None:intergenic |
| TATCCACCTGGGATTGGGTT+AGG | 0.461594 | 7.4:+28912286 | MS.gene52215:CDS |
| AGTGGTAGTGGTAGTGGTGG+TGG | 0.462858 | 7.4:+28912319 | MS.gene52215:CDS |
| ATCATGAACAACAACAATAG+AGG | 0.467952 | 7.4:+28912259 | None:intergenic |
| CAGCTGCTGATACACGCTAT+AGG | 0.470856 | 7.4:+28913376 | MS.gene52215:CDS |
| CAAGAATGTCACTGCCAGTA+AGG | 0.471837 | 7.4:-28915325 | None:intergenic |
| GTACCAACAAGCAGATGAAC+AGG | 0.475879 | 7.4:-28917462 | None:intergenic |
| TACATTTCCTGTTACTGTAA+AGG | 0.480320 | 7.4:+28917994 | MS.gene52215:CDS |
| GGAGGACGTGGTAGTGGTAG+TGG | 0.480563 | 7.4:+28912307 | MS.gene52215:CDS |
| ATTCAAGTTATGGTCACAAC+AGG | 0.487922 | 7.4:+28917399 | MS.gene52215:CDS |
| TGTCAGTACCACCACCCAAC+TGG | 0.488235 | 7.4:-28912561 | None:intergenic |
| GATATGCAGGTTGGTCGATC+CGG | 0.494215 | 7.4:+28918890 | MS.gene52215:intron |
| TCTCAAGTGTGTAAAGAGCT+TGG | 0.494662 | 7.4:+28917363 | MS.gene52215:CDS |
| CGTGGTAGTGGTAGTGGTAG+TGG | 0.494777 | 7.4:+28912313 | MS.gene52215:CDS |
| AACTAAGGGAAATGAGTTTG+AGG | 0.503108 | 7.4:+28915211 | MS.gene52215:CDS |
| ATATTGTGTAATACCCTTCA+GGG | 0.503780 | 7.4:-28918074 | None:intergenic |
| TCAGGGTAAGCTCATCCATA+AGG | 0.509101 | 7.4:-28918057 | None:intergenic |
| TGCAGAGCCAATTCTCGTGT+TGG | 0.509116 | 7.4:-28917336 | None:intergenic |
| GGGTTAGGAGGACGTGGTAG+TGG | 0.511475 | 7.4:+28912301 | MS.gene52215:CDS |
| TCCGGAAGGTTTGGGCACCT+TGG | 0.512019 | 7.4:+28918908 | MS.gene52215:CDS |
| TGCAGGAATCTCGTTTGTAC+TGG | 0.512233 | 7.4:+28918396 | MS.gene52215:CDS |
| GGTAGTGGTAGTGGTGGTGG+TGG | 0.512705 | 7.4:+28912322 | MS.gene52215:CDS |
| TGTTGTTGTTGTTGATAATG+TGG | 0.517561 | 7.4:-28912403 | None:intergenic |
| TACACAATATTATGCATTCG+TGG | 0.520210 | 7.4:+28918087 | MS.gene52215:CDS |
| AGTCATGGAAAACTCTATTA+CGG | 0.522164 | 7.4:-28918359 | None:intergenic |
| TTGACCAGGCTATATATTGT+CGG | 0.523937 | 7.4:+28919293 | MS.gene52215:CDS |
| ACTCAGAAACATATCTGCAC+AGG | 0.526402 | 7.4:+28918795 | MS.gene52215:CDS |
| CTGAGGAGGAACCAGTTGGG+TGG | 0.527919 | 7.4:+28912550 | MS.gene52215:intron |
| TATATAGCCTGGTCAATGAA+TGG | 0.528302 | 7.4:-28919286 | None:intergenic |
| CTTTCTTCTTGGATAGGGGA+AGG | 0.528864 | 7.4:-28915290 | None:intergenic |
| AATGCGAACAACTTGAACAC+CGG | 0.529192 | 7.4:+28912367 | MS.gene52215:CDS |
| TATATGAGAAGGGGTTTGAA+AGG | 0.529351 | 7.4:+28915267 | MS.gene52215:CDS |
| CTATAGCGTGTATCAGCAGC+TGG | 0.530834 | 7.4:-28913375 | None:intergenic |
| TGTTAGTTCACAAGATTGGA+AGG | 0.533480 | 7.4:+28913338 | MS.gene52215:intron |
| AAGAATGTCACTGCCAGTAA+GGG | 0.548067 | 7.4:-28915324 | None:intergenic |
| TGGCAGTGACATTCTTGCTA+GGG | 0.556476 | 7.4:+28915331 | MS.gene52215:CDS |
| AGTGAACTTGGTAACCTATG+AGG | 0.556563 | 7.4:+28918937 | MS.gene52215:CDS |
| CTAAGAAAATCACAGAACTA+GGG | 0.563108 | 7.4:+28918295 | MS.gene52215:CDS |
| TGGCTGAGGAGGAACCAGTT+GGG | 0.564082 | 7.4:+28912547 | MS.gene52215:intron |
| CATAATGTCATCTTTCAGGC+TGG | 0.564266 | 7.4:-28917427 | None:intergenic |
| ATGCGAACAACTTGAACACC+GGG | 0.564269 | 7.4:+28912368 | MS.gene52215:CDS |
| AATTGCAGAAGATAATCGAT+TGG | 0.567529 | 7.4:-28918248 | None:intergenic |
| ACTTCCGCAATGGTGCATGC+AGG | 0.570720 | 7.4:+28918379 | MS.gene52215:CDS |
| CTAATGGGAATATATGAGAA+GGG | 0.572054 | 7.4:+28915257 | MS.gene52215:CDS |
| AGGAGGAACCAGTTGGGTGG+TGG | 0.572405 | 7.4:+28912553 | MS.gene52215:intron |
| TTCTATGCTTGTCATGGATG+AGG | 0.575458 | 7.4:+28917539 | MS.gene52215:CDS |
| TATAGGATTGAACAAGAACT+TGG | 0.583465 | 7.4:+28919241 | MS.gene52215:CDS |
| ATCACCGACAATATATAGCC+TGG | 0.584273 | 7.4:-28919297 | None:intergenic |
| GCTAATGGGAATATATGAGA+AGG | 0.585242 | 7.4:+28915256 | MS.gene52215:CDS |
| AATTCCGCCATTCATTGACC+AGG | 0.586353 | 7.4:+28919279 | MS.gene52215:CDS |
| CGTCCTCCTAACCCAATCCC+AGG | 0.589898 | 7.4:-28912292 | None:intergenic |
| TCATGAACAACAACAATAGA+GGG | 0.591069 | 7.4:+28912260 | None:intergenic |
| AGATTGTTCTATGCTTGTCA+TGG | 0.591666 | 7.4:+28917533 | MS.gene52215:CDS |
| ATGGATGAGCTTACCCTGAA+GGG | 0.593014 | 7.4:+28918061 | MS.gene52215:CDS |
| ATGCACCATTGCGGAAGTCA+TGG | 0.593776 | 7.4:-28918374 | None:intergenic |
| AATGCTTTCTTCTTGGATAG+GGG | 0.593841 | 7.4:-28915294 | None:intergenic |
| CCACCTGGGATTGGGTTAGG+AGG | 0.602021 | 7.4:+28912289 | MS.gene52215:CDS |
| GTGGCTGAGGAGGAACCAGT+TGG | 0.607435 | 7.4:+28912546 | MS.gene52215:intron |
| TATGGATGAGCTTACCCTGA+AGG | 0.609955 | 7.4:+28918060 | MS.gene52215:CDS |
| TGCAGGTTGGTCGATCCGGA+AGG | 0.610814 | 7.4:+28918894 | MS.gene52215:intron |
| AGTCTGAAACAAATGACCCT+AGG | 0.611339 | 7.4:+28912617 | MS.gene52215:CDS |
| ATTATGCATTCGTGGAGGAG+AGG | 0.617509 | 7.4:+28918095 | MS.gene52215:CDS |
| CAAGTTATGGTCACAACAGG+TGG | 0.624109 | 7.4:+28917402 | MS.gene52215:CDS |
| AATAGAGGGATATATCCACC+TGG | 0.626082 | 7.4:+28912274 | MS.gene52215:CDS |
| ATATTGGATCTTGCAAAGAA+GGG | 0.629948 | 7.4:+28917495 | MS.gene52215:CDS |
| CTCAGAAACATATCTGCACA+GGG | 0.632923 | 7.4:+28918796 | MS.gene52215:CDS |
| CAGGACGTGACAGCAACTAA+GGG | 0.635435 | 7.4:+28915197 | MS.gene52215:intron |
| CATGGAAAACTCTATTACGG+TGG | 0.637092 | 7.4:-28918356 | None:intergenic |
| TACTGACACCAACGTTGTCG+AGG | 0.637320 | 7.4:+28912576 | MS.gene52215:CDS |
| GGGATTGGGTTAGGAGGACG+TGG | 0.643756 | 7.4:+28912295 | MS.gene52215:CDS |
| CTCAACCTCCTCGACAACGT+TGG | 0.651884 | 7.4:-28912584 | None:intergenic |
| TAATGGGAATATATGAGAAG+GGG | 0.656333 | 7.4:+28915258 | MS.gene52215:CDS |
| ATGTGGTCTCTGTTGAAACC+CGG | 0.657661 | 7.4:-28912386 | None:intergenic |
| TGACACCAACGTTGTCGAGG+AGG | 0.662571 | 7.4:+28912579 | MS.gene52215:CDS |
| GGTAGTGGTAGTGGTAGTGG+TGG | 0.676259 | 7.4:+28912316 | MS.gene52215:CDS |
| GATTCCTGCATGCACCATTG+CGG | 0.682050 | 7.4:-28918383 | None:intergenic |
| CCTCCTAACCCAATCCCAGG+TGG | 0.686741 | 7.4:-28912289 | None:intergenic |
| CCAAGTTCACTGCTAAACCA+AGG | 0.700064 | 7.4:-28918925 | None:intergenic |
| ACAATATTATGCATTCGTGG+AGG | 0.702238 | 7.4:+28918090 | MS.gene52215:CDS |
| ATAGCCTGGTCAATGAATGG+CGG | 0.708720 | 7.4:-28919283 | None:intergenic |
| ATAGAGGGATATATCCACCT+GGG | 0.710741 | 7.4:+28912275 | MS.gene52215:CDS |
| TATTGAAGGCTTGAACTCTG+GGG | 0.717707 | 7.4:-28917918 | None:intergenic |
| TGATACACGCTATAGGACAG+AGG | 0.742745 | 7.4:+28913383 | MS.gene52215:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 28912262 | 28919318 | 28912262 | ID=MS.gene52215 |
| chr7.4 | mRNA | 28912262 | 28919318 | 28912262 | ID=MS.gene52215.t1;Parent=MS.gene52215 |
| chr7.4 | exon | 28912262 | 28912425 | 28912262 | ID=MS.gene52215.t1.exon1;Parent=MS.gene52215.t1 |
| chr7.4 | CDS | 28912262 | 28912425 | 28912262 | ID=cds.MS.gene52215.t1;Parent=MS.gene52215.t1 |
| chr7.4 | exon | 28912555 | 28912638 | 28912555 | ID=MS.gene52215.t1.exon2;Parent=MS.gene52215.t1 |
| chr7.4 | CDS | 28912555 | 28912638 | 28912555 | ID=cds.MS.gene52215.t1;Parent=MS.gene52215.t1 |
| chr7.4 | exon | 28913344 | 28913404 | 28913344 | ID=MS.gene52215.t1.exon3;Parent=MS.gene52215.t1 |
| chr7.4 | CDS | 28913344 | 28913404 | 28913344 | ID=cds.MS.gene52215.t1;Parent=MS.gene52215.t1 |
| chr7.4 | exon | 28915200 | 28915434 | 28915200 | ID=MS.gene52215.t1.exon4;Parent=MS.gene52215.t1 |
| chr7.4 | CDS | 28915200 | 28915434 | 28915200 | ID=cds.MS.gene52215.t1;Parent=MS.gene52215.t1 |
| chr7.4 | exon | 28917322 | 28917560 | 28917322 | ID=MS.gene52215.t1.exon5;Parent=MS.gene52215.t1 |
| chr7.4 | CDS | 28917322 | 28917560 | 28917322 | ID=cds.MS.gene52215.t1;Parent=MS.gene52215.t1 |
| chr7.4 | exon | 28917902 | 28918153 | 28917902 | ID=MS.gene52215.t1.exon6;Parent=MS.gene52215.t1 |
| chr7.4 | CDS | 28917902 | 28918153 | 28917902 | ID=cds.MS.gene52215.t1;Parent=MS.gene52215.t1 |
| chr7.4 | exon | 28918237 | 28918417 | 28918237 | ID=MS.gene52215.t1.exon7;Parent=MS.gene52215.t1 |
| chr7.4 | CDS | 28918237 | 28918417 | 28918237 | ID=cds.MS.gene52215.t1;Parent=MS.gene52215.t1 |
| chr7.4 | exon | 28918729 | 28918817 | 28918729 | ID=MS.gene52215.t1.exon8;Parent=MS.gene52215.t1 |
| chr7.4 | CDS | 28918729 | 28918817 | 28918729 | ID=cds.MS.gene52215.t1;Parent=MS.gene52215.t1 |
| chr7.4 | exon | 28918899 | 28918972 | 28918899 | ID=MS.gene52215.t1.exon9;Parent=MS.gene52215.t1 |
| chr7.4 | CDS | 28918899 | 28918972 | 28918899 | ID=cds.MS.gene52215.t1;Parent=MS.gene52215.t1 |
| chr7.4 | exon | 28919240 | 28919318 | 28919240 | ID=MS.gene52215.t1.exon10;Parent=MS.gene52215.t1 |
| chr7.4 | CDS | 28919240 | 28919318 | 28919240 | ID=cds.MS.gene52215.t1;Parent=MS.gene52215.t1 |
| Gene Sequence |
| Protein sequence |
