Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68595.t1 | XP_013458327.1 | 66.6 | 589 | 79 | 9 | 1 | 487 | 1 | 573 | 1.10E-197 | 699.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68595.t1 | Q93Y07 | 49.6 | 566 | 187 | 10 | 4 | 487 | 1 | 550 | 2.0e-139 | 497.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68595.t1 | A0A072UTJ9 | 66.6 | 589 | 79 | 9 | 1 | 487 | 1 | 573 | 7.9e-198 | 699.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene68595 | 0.804017 | 2.64E-49 | -1.69E-46 |
| MS.gene049257 | MS.gene68595 | 0.849556 | 3.00E-60 | -1.69E-46 |
| MS.gene049633 | MS.gene68595 | 0.809841 | 1.55E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene68595 | 0.822016 | 2.97E-53 | -1.69E-46 |
| MS.gene05081 | MS.gene68595 | 0.848024 | 7.98E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene68595 | 0.803052 | 4.19E-49 | -1.69E-46 |
| MS.gene051244 | MS.gene68595 | 0.809701 | 1.66E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene68595 | 0.801507 | 8.72E-49 | -1.69E-46 |
| MS.gene051552 | MS.gene68595 | -0.809242 | 2.08E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene68595 | 0.826801 | 2.22E-54 | -1.69E-46 |
| MS.gene051941 | MS.gene68595 | 0.810781 | 9.72E-51 | -1.69E-46 |
| MS.gene052469 | MS.gene68595 | 0.842221 | 2.95E-58 | -1.69E-46 |
| MS.gene053097 | MS.gene68595 | -0.800498 | 1.40E-48 | -1.69E-46 |
| MS.gene053480 | MS.gene68595 | 0.80901 | 2.34E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene68595 | 0.816163 | 6.37E-52 | -1.69E-46 |
| MS.gene054107 | MS.gene68595 | 0.826645 | 2.42E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene68595 | 0.830726 | 2.50E-55 | -1.69E-46 |
| MS.gene054344 | MS.gene68595 | 0.862778 | 3.98E-64 | -1.69E-46 |
| MS.gene05470 | MS.gene68595 | 0.819967 | 8.79E-53 | -1.69E-46 |
| MS.gene054884 | MS.gene68595 | -0.848831 | 4.77E-60 | -1.69E-46 |
| MS.gene055159 | MS.gene68595 | -0.801169 | 1.02E-48 | -1.69E-46 |
| MS.gene055539 | MS.gene68595 | 0.846356 | 2.29E-59 | -1.69E-46 |
| MS.gene055741 | MS.gene68595 | 0.830848 | 2.33E-55 | -1.69E-46 |
| MS.gene055744 | MS.gene68595 | 0.823435 | 1.39E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene68595 | 0.818078 | 2.37E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene68595 | 0.812011 | 5.25E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene68595 | 0.850712 | 1.42E-60 | -1.69E-46 |
| MS.gene056351 | MS.gene68595 | 0.809169 | 2.16E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene68595 | 0.823338 | 1.46E-53 | -1.69E-46 |
| MS.gene057019 | MS.gene68595 | 0.807204 | 5.67E-50 | -1.69E-46 |
| MS.gene057196 | MS.gene68595 | 0.804668 | 1.93E-49 | -1.69E-46 |
| MS.gene057332 | MS.gene68595 | 0.852225 | 5.31E-61 | -1.69E-46 |
| MS.gene057658 | MS.gene68595 | 0.815107 | 1.10E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene68595 | 0.801493 | 8.77E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene68595 | 0.809211 | 2.12E-50 | -1.69E-46 |
| MS.gene058418 | MS.gene68595 | -0.822669 | 2.09E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene68595 | 0.821343 | 4.25E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene68595 | 0.847736 | 9.58E-60 | -1.69E-46 |
| MS.gene05914 | MS.gene68595 | 0.831218 | 1.89E-55 | -1.69E-46 |
| MS.gene059303 | MS.gene68595 | 0.811771 | 5.92E-51 | -1.69E-46 |
| MS.gene059512 | MS.gene68595 | 0.817459 | 3.26E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene68595 | 0.807635 | 4.59E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene68595 | 0.801511 | 8.70E-49 | -1.69E-46 |
| MS.gene061231 | MS.gene68595 | 0.9264 | 4.94E-91 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68595.t1 | MTR_4g122980 | 66.553 | 589 | 79 | 9 | 1 | 487 | 1 | 573 | 0.0 | 714 |
| MS.gene68595.t1 | MTR_4g012780 | 82.857 | 35 | 6 | 0 | 450 | 484 | 132 | 166 | 3.85e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68595.t1 | AT3G06510 | 49.647 | 566 | 187 | 11 | 4 | 487 | 1 | 550 | 2.00e-173 | 502 |
| MS.gene68595.t1 | AT3G06510 | 46.499 | 357 | 133 | 9 | 4 | 318 | 1 | 341 | 1.12e-91 | 293 |
| MS.gene68595.t1 | AT3G06510 | 60.101 | 198 | 62 | 2 | 293 | 487 | 401 | 584 | 6.27e-70 | 235 |
Find 117 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGACTTACAGATTCTTTA+AGG | 0.157381 | 8.4:-11430462 | None:intergenic |
| CCTTTCATTATTGCTGAAAA+TGG | 0.160067 | 8.4:+11431863 | MS.gene68595:CDS |
| CTGTGCTTGGTTACCTCTTC+TGG | 0.248895 | 8.4:+11432063 | MS.gene68595:CDS |
| TTAGATGCTTGTATCTTTCA+TGG | 0.258804 | 8.4:-11431835 | None:intergenic |
| CCACCCTGGGCCGGTGATTA+TGG | 0.261930 | 8.4:+11430768 | MS.gene68595:CDS |
| TCCTGATACAGAACTAAAAT+TGG | 0.270840 | 8.4:+11430363 | MS.gene68595:CDS |
| TTCTGGACTATTCTGATAAC+TGG | 0.280210 | 8.4:+11432080 | MS.gene68595:CDS |
| TGTACATCAGGAAGCGATTT+CGG | 0.284236 | 8.4:+11431721 | MS.gene68595:intron |
| GATTCTTTAAGGCTGTTTAC+TGG | 0.292666 | 8.4:-11430451 | None:intergenic |
| CCCTCGTTGCGCAGATGATA+TGG | 0.300230 | 8.4:-11429443 | None:intergenic |
| GTACATCAGGAAGCGATTTC+GGG | 0.300370 | 8.4:+11431722 | MS.gene68595:intron |
| TGTATGCTTACTTACTGTTC+TGG | 0.302328 | 8.4:+11431148 | MS.gene68595:CDS |
| GATCATCGCGTGTACCTTTA+CGG | 0.309870 | 8.4:-11432301 | None:intergenic |
| TATCAGATTTAGTAGACTAT+TGG | 0.332759 | 8.4:+11431098 | MS.gene68595:CDS |
| TTGTCCACAGCCCGATAAAA+TGG | 0.337862 | 8.4:-11432377 | None:intergenic |
| GATGGATATGGTCCCAAGTT+TGG | 0.341947 | 8.4:+11432112 | MS.gene68595:CDS |
| CCGCGAGTTTAGTGGCAGTT+AGG | 0.355695 | 8.4:-11428718 | None:intergenic |
| ATCAATAGGGTTCGATCATA+TGG | 0.366808 | 8.4:+11430706 | MS.gene68595:intron |
| ATCTGCGCAACGAGGGCTTA+AGG | 0.376736 | 8.4:+11429450 | MS.gene68595:CDS |
| GTAGCAGCCTCTAGCATATC+AGG | 0.383932 | 8.4:-11431190 | None:intergenic |
| ATCAGATTTAGTAGACTATT+GGG | 0.388367 | 8.4:+11431099 | MS.gene68595:CDS |
| AATGATGAGTACAGTGAATC+TGG | 0.391568 | 8.4:+11431767 | MS.gene68595:CDS |
| TGGGAGTGGGCTGATGGATA+TGG | 0.403938 | 8.4:+11432100 | MS.gene68595:CDS |
| TACTGTTCTGGAACCTGGCC+TGG | 0.406059 | 8.4:+11431160 | MS.gene68595:CDS |
| ACCTGCGACAAGTCCAAACT+TGG | 0.415032 | 8.4:-11432125 | None:intergenic |
| AAAGACAGTGGATTATTTCA+AGG | 0.419249 | 8.4:+11430806 | MS.gene68595:CDS |
| CAAATATTCACCTGAGTTCG+TGG | 0.419421 | 8.4:-11431292 | None:intergenic |
| AATCAATGCAGGCTTGTTGT+TGG | 0.420436 | 8.4:+11431069 | MS.gene68595:intron |
| TCATCACTCACTTCCACCCT+GGG | 0.420608 | 8.4:+11430755 | MS.gene68595:CDS |
| TTCATCACTCACTTCCACCC+TGG | 0.424450 | 8.4:+11430754 | MS.gene68595:CDS |
| TTACTTACTGTTCTGGAACC+TGG | 0.428685 | 8.4:+11431155 | MS.gene68595:CDS |
| CTACAGGGTGTGCCTGTGCT+TGG | 0.432531 | 8.4:+11432050 | MS.gene68595:intron |
| TCTGCGCAACGAGGGCTTAA+GGG | 0.438340 | 8.4:+11429451 | MS.gene68595:CDS |
| GCTGAACAAGAGAGTGTTGC+CGG | 0.439290 | 8.4:+11429359 | MS.gene68595:CDS |
| ATATCCAATGCATGGCCTGC+TGG | 0.439716 | 8.4:-11431237 | None:intergenic |
| CCCAAGTTTGGACTTGTCGC+AGG | 0.443168 | 8.4:+11432124 | MS.gene68595:CDS |
| ACCTCCATAATCACCGGCCC+AGG | 0.458461 | 8.4:-11430772 | None:intergenic |
| GGGTAACAAGAAGTCTCTTA+AGG | 0.459175 | 8.4:+11429471 | MS.gene68595:CDS |
| CAGGAAGCGATTTCGGGTGC+TGG | 0.460871 | 8.4:+11431728 | MS.gene68595:intron |
| AGGACAGGCTTGATGATGCT+TGG | 0.463999 | 8.4:+11429327 | MS.gene68595:CDS |
| TACAAGCTCCGCGAGTTTAG+TGG | 0.465279 | 8.4:-11428726 | None:intergenic |
| AGTAAATGCTCCAAGAGATA+TGG | 0.467848 | 8.4:-11431917 | None:intergenic |
| ATTACCGGTACTGTTGAAAT+CGG | 0.471298 | 8.4:-11428852 | None:intergenic |
| AACTCATCAAATCAAATAGT+TGG | 0.480032 | 8.4:+11431492 | MS.gene68595:CDS |
| GAAGTCTCTTAAGGTAGCTA+TGG | 0.490346 | 8.4:+11429480 | MS.gene68595:CDS |
| TCTTGTCTTCTTCTCTTTAG+CGG | 0.491603 | 8.4:-11432354 | None:intergenic |
| GATCCGCCGACCATATCTCT+TGG | 0.492133 | 8.4:+11431907 | MS.gene68595:CDS |
| CAGGGAGGGAGATTAAGGTT+TGG | 0.492967 | 8.4:+11430335 | MS.gene68595:intron |
| CACTCACTTCCACCCTGGGC+CGG | 0.494939 | 8.4:+11430759 | MS.gene68595:CDS |
| ATCAGGATGTCCACCAGGCC+AGG | 0.496467 | 8.4:-11431173 | None:intergenic |
| AACATGCGATATAAGCCATC+AGG | 0.498179 | 8.4:-11431803 | None:intergenic |
| GCTACTTCCGCACTTCCTAC+AGG | 0.498844 | 8.4:+11431208 | MS.gene68595:CDS |
| TGATTATGGAGGTTGGAAGC+TGG | 0.500135 | 8.4:+11430782 | MS.gene68595:CDS |
| GTTGAAATCGGCGAGAGTAT+CGG | 0.506142 | 8.4:-11428840 | None:intergenic |
| TTAGAAAACAGATGGTAAGA+AGG | 0.506880 | 8.4:-11432182 | None:intergenic |
| GATAACTGGGAGTGGGCTGA+TGG | 0.509425 | 8.4:+11432094 | MS.gene68595:CDS |
| TCCGTGCAAGATTATTTGCT+CGG | 0.509949 | 8.4:-11432151 | None:intergenic |
| AAACAGTAACACAGTATCCT+TGG | 0.513717 | 8.4:-11430386 | None:intergenic |
| TAACAAACAAATGCCACTAA+AGG | 0.516197 | 8.4:-11430849 | None:intergenic |
| GGGTGCTGGCCTGAAGCTTG+TGG | 0.519846 | 8.4:+11431742 | MS.gene68595:CDS |
| GTATCGGAGGATTCATCGAT+AGG | 0.530323 | 8.4:-11428824 | None:intergenic |
| TTTGTTGCGAAAACGAGAGA+AGG | 0.531839 | 8.4:-11428781 | None:intergenic |
| CACCGGCACATGTTGAGGAC+AGG | 0.532272 | 8.4:+11429312 | MS.gene68595:CDS |
| GGGCCGGTGATTATGGAGGT+TGG | 0.535413 | 8.4:+11430775 | MS.gene68595:CDS |
| ATTCTCAAATCCTCTGATCA+TGG | 0.535609 | 8.4:-11429506 | None:intergenic |
| AGCCTGTCCTCAACATGTGC+CGG | 0.537611 | 8.4:-11429314 | None:intergenic |
| TCAGAGGATTTGAGAATACA+TGG | 0.538887 | 8.4:+11429512 | MS.gene68595:CDS |
| GCGATGATCGTGATAACGCT+TGG | 0.539634 | 8.4:+11432315 | MS.gene68595:CDS |
| TGTGTCGTTTAGCGACCCTA+TGG | 0.550382 | 8.4:+11431527 | MS.gene68595:CDS |
| GATATCTGTTGCACACTCAA+AGG | 0.564342 | 8.4:+11431255 | MS.gene68595:CDS |
| AGCATATCAGGATGTCCACC+AGG | 0.569201 | 8.4:-11431178 | None:intergenic |
| CTTTGGTCTAGCGACAGCAC+CGG | 0.569537 | 8.4:+11429295 | MS.gene68595:CDS |
| ACTATTCTGATAACTGGGAG+TGG | 0.573093 | 8.4:+11432086 | MS.gene68595:CDS |
| GACAGCACCGGCACATGTTG+AGG | 0.574188 | 8.4:+11429307 | MS.gene68595:CDS |
| AGGCTGTTTACTGGCTCATG+AGG | 0.574448 | 8.4:-11430442 | None:intergenic |
| TGATTACAATCCACGAACTC+AGG | 0.576963 | 8.4:+11431282 | MS.gene68595:CDS |
| TAGAAAACAGATGGTAAGAA+GGG | 0.578554 | 8.4:-11432181 | None:intergenic |
| CTCAGGTGAATATTTGTCAG+AGG | 0.581910 | 8.4:+11431299 | MS.gene68595:CDS |
| TACAAACTTTAGAAAACAGA+TGG | 0.582069 | 8.4:-11432190 | None:intergenic |
| CAGAAGAGGTAACCAAGCAC+AGG | 0.582991 | 8.4:-11432062 | None:intergenic |
| GCAGGTTGTAAGTACCGTAA+AGG | 0.583795 | 8.4:+11432287 | MS.gene68595:intron |
| GTCTCTTAAGGTAGCTATGG+AGG | 0.585522 | 8.4:+11429483 | MS.gene68595:CDS |
| AAGTAAGCATACAGAAGACA+TGG | 0.587256 | 8.4:-11431138 | None:intergenic |
| CTATTCTGATAACTGGGAGT+GGG | 0.587361 | 8.4:+11432087 | MS.gene68595:CDS |
| TGCAACAGATATCCAATGCA+TGG | 0.588834 | 8.4:-11431245 | None:intergenic |
| TACAGAACTAAAATTGGCCA+AGG | 0.590023 | 8.4:+11430369 | MS.gene68595:CDS |
| ACCGAGCAAATAATCTTGCA+CGG | 0.590207 | 8.4:+11432150 | MS.gene68595:CDS |
| TTATCAGAATAGTCCAGAAG+AGG | 0.590832 | 8.4:-11432076 | None:intergenic |
| TATCGGAGGATTCATCGATA+GGG | 0.598351 | 8.4:-11428823 | None:intergenic |
| CTTCCAACCTCCATAATCAC+CGG | 0.604506 | 8.4:-11430778 | None:intergenic |
| TGTTCTGGAACCTGGCCTGG+TGG | 0.605992 | 8.4:+11431163 | MS.gene68595:CDS |
| TCTGGACTATTCTGATAACT+GGG | 0.608507 | 8.4:+11432081 | MS.gene68595:CDS |
| CCCTGGGCCGGTGATTATGG+AGG | 0.616382 | 8.4:+11430771 | MS.gene68595:CDS |
| GGACGTGGAGTATATCCTGA+TGG | 0.620310 | 8.4:+11431788 | MS.gene68595:CDS |
| CTCGCCGATTTCAACAGTAC+CGG | 0.624652 | 8.4:+11428848 | MS.gene68595:CDS |
| TCATCGATAGGGAAGTGAAA+CGG | 0.626752 | 8.4:-11428812 | None:intergenic |
| GAAGAGTGAAACTATCGTCA+TGG | 0.627384 | 8.4:-11428696 | None:intergenic |
| CCATATCATCTGCGCAACGA+GGG | 0.629741 | 8.4:+11429443 | MS.gene68595:CDS |
| GCTATGGAGGCCATGATCAG+AGG | 0.630260 | 8.4:+11429496 | MS.gene68595:CDS |
| AACAGATGGTAAGAAGGGCG+AGG | 0.630415 | 8.4:-11432176 | None:intergenic |
| CCTCCATAATCACCGGCCCA+GGG | 0.633146 | 8.4:-11430771 | None:intergenic |
| GCCATATCATCTGCGCAACG+AGG | 0.637784 | 8.4:+11429442 | MS.gene68595:intron |
| TCATATGGAATGAAGTGATG+AGG | 0.637928 | 8.4:+11430721 | MS.gene68595:CDS |
| TGTTTATGCTGCTATGATCG+AGG | 0.638077 | 8.4:+11431943 | MS.gene68595:CDS |
| AGTAAGCATACAGAAGACAT+GGG | 0.649848 | 8.4:-11431137 | None:intergenic |
| GCCTGCTGGAAAACACCTGT+AGG | 0.655259 | 8.4:-11431223 | None:intergenic |
| TGGACATCCTGATATGCTAG+AGG | 0.661739 | 8.4:+11431183 | MS.gene68595:CDS |
| CCTAACTGCCACTAAACTCG+CGG | 0.664864 | 8.4:+11428718 | MS.gene68595:CDS |
| CCTGCGACAAGTCCAAACTT+GGG | 0.666772 | 8.4:-11432124 | None:intergenic |
| GAGTACAGTGAATCTGGACG+TGG | 0.667884 | 8.4:+11431773 | MS.gene68595:CDS |
| CCATAATCACCGGCCCAGGG+TGG | 0.668391 | 8.4:-11430768 | None:intergenic |
| TTGGAAGCTGGAAAAGACAG+TGG | 0.672743 | 8.4:+11430794 | MS.gene68595:CDS |
| GAAAACACCTGTAGGAAGTG+CGG | 0.675092 | 8.4:-11431215 | None:intergenic |
| GAAATCGGCGAGAGTATCGG+AGG | 0.675982 | 8.4:-11428837 | None:intergenic |
| GCTCCAAGAGATATGGTCGG+CGG | 0.699012 | 8.4:-11431910 | None:intergenic |
| AATGCTCCAAGAGATATGGT+CGG | 0.704069 | 8.4:-11431913 | None:intergenic |
| GTAAGCATACAGAAGACATG+GGG | 0.722281 | 8.4:-11431136 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAAATAAGGAATTAT+TGG | - | chr8.4:11430167-11430186 | None:intergenic | 10.0% |
| !! | GTCATTAATAAAATAGATTA+AGG | + | chr8.4:11428969-11428988 | MS.gene68595:intron | 15.0% |
| !!! | AATATTTCCTTTGTAATTTT+GGG | + | chr8.4:11432239-11432258 | MS.gene68595:intron | 15.0% |
| !!! | TAATATTTCCTTTGTAATTT+TGG | + | chr8.4:11432238-11432257 | MS.gene68595:intron | 15.0% |
| !! | ATCAATCAGAATCAATAATT+TGG | + | chr8.4:11429810-11429829 | MS.gene68595:intron | 20.0% |
| !! | ATCATAATAGAGATTATTAC+CGG | - | chr8.4:11428870-11428889 | None:intergenic | 20.0% |
| !! | CTCTATTATGATTCATTAAT+TGG | + | chr8.4:11428878-11428897 | MS.gene68595:intron | 20.0% |
| !! | TTATCATATAATGTCATCTT+TGG | + | chr8.4:11429038-11429057 | MS.gene68595:intron | 20.0% |
| !!! | ACAAGATATCATGAATATTT+TGG | - | chr8.4:11430135-11430154 | None:intergenic | 20.0% |
| ! | AACTCATCAAATCAAATAGT+TGG | + | chr8.4:11431492-11431511 | MS.gene68595:CDS | 25.0% |
| ! | ATAGCTTTCTTAACTGAAAA+TGG | + | chr8.4:11430204-11430223 | MS.gene68595:intron | 25.0% |
| ! | ATCAGATTTAGTAGACTATT+GGG | + | chr8.4:11431099-11431118 | MS.gene68595:CDS | 25.0% |
| ! | ATTCAACAACATATCACTTA+TGG | - | chr8.4:11429973-11429992 | None:intergenic | 25.0% |
| ! | TAACTAATCATCATACAGAA+AGG | - | chr8.4:11430495-11430514 | None:intergenic | 25.0% |
| ! | TATCAGATTTAGTAGACTAT+TGG | + | chr8.4:11431098-11431117 | MS.gene68595:CDS | 25.0% |
| ! | TCATAGTTAGCATATATTAG+TGG | + | chr8.4:11430524-11430543 | MS.gene68595:intron | 25.0% |
| ! | TCTATCAGGCATAAATAAAT+TGG | - | chr8.4:11430006-11430025 | None:intergenic | 25.0% |
| ! | TGATTCTGATTGATTGTATT+AGG | - | chr8.4:11429804-11429823 | None:intergenic | 25.0% |
| ! | TTTATTAATGACATTCGTCA+AGG | - | chr8.4:11428961-11428980 | None:intergenic | 25.0% |
| !! | AAAATTAATGCCTGATTTTC+AGG | + | chr8.4:11430316-11430335 | MS.gene68595:intron | 25.0% |
| !! | AAATTAATGCCTGATTTTCA+GGG | + | chr8.4:11430317-11430336 | MS.gene68595:intron | 25.0% |
| !! | ATTGGATTTTTGATGTGAAA+GGG | + | chr8.4:11429649-11429668 | MS.gene68595:intron | 25.0% |
| !! | CAATAATTTGGTAACAAATC+AGG | + | chr8.4:11429822-11429841 | MS.gene68595:intron | 25.0% |
| !! | CATTTTCAGCAATAATGAAA+GGG | - | chr8.4:11431865-11431884 | None:intergenic | 25.0% |
| !! | GTAAGTTTGAGATAAAACTT+TGG | - | chr8.4:11430579-11430598 | None:intergenic | 25.0% |
| !! | TACAAACTTTAGAAAACAGA+TGG | - | chr8.4:11432193-11432212 | None:intergenic | 25.0% |
| !!! | ATGAATATTTTGGATATGCT+AGG | - | chr8.4:11430125-11430144 | None:intergenic | 25.0% |
| !!! | ATTTTGGGTGACATTTTTAA+TGG | + | chr8.4:11432254-11432273 | MS.gene68595:intron | 25.0% |
| !!! | CATCATGTTATCTAGTTTTA+TGG | + | chr8.4:11430999-11431018 | MS.gene68595:intron | 25.0% |
| !!! | CTATAAGTGGATTATCAATA+GGG | + | chr8.4:11430693-11430712 | MS.gene68595:intron | 25.0% |
| AAATAGATTAAGGCTCTCTT+TGG | + | chr8.4:11428979-11428998 | MS.gene68595:intron | 30.0% | |
| AATGTCACCCAAAATTACAA+AGG | - | chr8.4:11432249-11432268 | None:intergenic | 30.0% | |
| ACAAACAAATAAGCCATGTT+TGG | - | chr8.4:11429249-11429268 | None:intergenic | 30.0% | |
| ACTTATGTAAGCAATTCACT+TGG | + | chr8.4:11430634-11430653 | MS.gene68595:intron | 30.0% | |
| AGTTAGCATATATTAGTGGA+TGG | + | chr8.4:11430528-11430547 | MS.gene68595:intron | 30.0% | |
| ATCGTATTTGAATTGCACTT+TGG | + | chr8.4:11430045-11430064 | MS.gene68595:intron | 30.0% | |
| CCTTTCATTATTGCTGAAAA+TGG | + | chr8.4:11431863-11431882 | MS.gene68595:CDS | 30.0% | |
| CGATGAAATATCCAAAATGA+TGG | + | chr8.4:11431604-11431623 | MS.gene68595:intron | 30.0% | |
| TAACAAACAAATGCCACTAA+AGG | - | chr8.4:11430852-11430871 | None:intergenic | 30.0% | |
| TAATAAATAAGCTGCTATCC+TGG | + | chr8.4:11429155-11429174 | MS.gene68595:intron | 30.0% | |
| TAGAAAACAGATGGTAAGAA+GGG | - | chr8.4:11432184-11432203 | None:intergenic | 30.0% | |
| TATTTCTTTGCAAACATGCA+TGG | + | chr8.4:11428931-11428950 | MS.gene68595:intron | 30.0% | |
| TCCTGATACAGAACTAAAAT+TGG | + | chr8.4:11430363-11430382 | MS.gene68595:CDS | 30.0% | |
| TGTAACTACCATATCTTGTA+TGG | - | chr8.4:11429770-11429789 | None:intergenic | 30.0% | |
| TGTAGCTAATATTGTTGTCA+AGG | + | chr8.4:11429688-11429707 | MS.gene68595:intron | 30.0% | |
| TTAGAAAACAGATGGTAAGA+AGG | - | chr8.4:11432185-11432204 | None:intergenic | 30.0% | |
| TTAGATGCTTGTATCTTTCA+TGG | - | chr8.4:11431838-11431857 | None:intergenic | 30.0% | |
| TTCATAAGTTTCTCCAAACA+TGG | + | chr8.4:11429233-11429252 | MS.gene68595:intron | 30.0% | |
| TTGGACTTACAGATTCTTTA+AGG | - | chr8.4:11430465-11430484 | None:intergenic | 30.0% | |
| TTGGATATTTCATCGATGAA+TGG | - | chr8.4:11431599-11431618 | None:intergenic | 30.0% | |
| ! | AGAAGACAAGACCATTTTAT+CGG | + | chr8.4:11432366-11432385 | MS.gene68595:CDS | 30.0% |
| ! | CATTGGATTTTTGATGTGAA+AGG | + | chr8.4:11429648-11429667 | MS.gene68595:intron | 30.0% |
| ! | CCATTTTCAGCAATAATGAA+AGG | - | chr8.4:11431866-11431885 | None:intergenic | 30.0% |
| ! | GTTTTGCAGAAGAAGAAAAT+GGG | + | chr8.4:11429267-11429286 | MS.gene68595:intron | 30.0% |
| ! | TGTATGATGATTAGTTATCG+TGG | + | chr8.4:11430498-11430517 | MS.gene68595:intron | 30.0% |
| ! | TGTTTTGCAGAAGAAGAAAA+TGG | + | chr8.4:11429266-11429285 | MS.gene68595:intron | 30.0% |
| ! | TTATTTCAAGGATTTTACCC+AGG | + | chr8.4:11430818-11430837 | MS.gene68595:CDS | 30.0% |
| ! | TTGGATTTTTGATGTGAAAG+GGG | + | chr8.4:11429650-11429669 | MS.gene68595:intron | 30.0% |
| ! | TTTGGTTTCCATAATCAAGT+TGG | - | chr8.4:11429898-11429917 | None:intergenic | 30.0% |
| !! | AAAGACAGTGGATTATTTCA+AGG | + | chr8.4:11430806-11430825 | MS.gene68595:CDS | 30.0% |
| !! | ATCCAAAATGATGGACTTAT+AGG | + | chr8.4:11431613-11431632 | MS.gene68595:intron | 30.0% |
| !! | GAAGAAAATGGGTTTTTCTT+TGG | + | chr8.4:11429278-11429297 | MS.gene68595:CDS | 30.0% |
| !! | GCTATAAGTGGATTATCAAT+AGG | + | chr8.4:11430692-11430711 | MS.gene68595:intron | 30.0% |
| !! | TGTGTTACTGTTTTTCGTAT+GGG | + | chr8.4:11430396-11430415 | MS.gene68595:CDS | 30.0% |
| AAACAGTAACACAGTATCCT+TGG | - | chr8.4:11430389-11430408 | None:intergenic | 35.0% | |
| AAGTAAGCATACAGAAGACA+TGG | - | chr8.4:11431141-11431160 | None:intergenic | 35.0% | |
| AATGATGAGTACAGTGAATC+TGG | + | chr8.4:11431767-11431786 | MS.gene68595:CDS | 35.0% | |
| ACATTCCTAATGTAACTGCT+TGG | + | chr8.4:11429565-11429584 | MS.gene68595:intron | 35.0% | |
| ACCAAAGTCTACAAACGTTT+AGG | + | chr8.4:11429912-11429931 | MS.gene68595:intron | 35.0% | |
| ACCTAAACGTTTGTAGACTT+TGG | - | chr8.4:11429916-11429935 | None:intergenic | 35.0% | |
| AGATCGCAAATATGCTTACA+TGG | - | chr8.4:11430963-11430982 | None:intergenic | 35.0% | |
| AGCAATATCAACAGACCATA+GGG | - | chr8.4:11431545-11431564 | None:intergenic | 35.0% | |
| AGTAAATGCTCCAAGAGATA+TGG | - | chr8.4:11431920-11431939 | None:intergenic | 35.0% | |
| AGTAAGCATACAGAAGACAT+GGG | - | chr8.4:11431140-11431159 | None:intergenic | 35.0% | |
| ATCAATAGGGTTCGATCATA+TGG | + | chr8.4:11430706-11430725 | MS.gene68595:intron | 35.0% | |
| ATCGTACAGAATGCATTGTT+AGG | - | chr8.4:11431670-11431689 | None:intergenic | 35.0% | |
| ATTACCGGTACTGTTGAAAT+CGG | - | chr8.4:11428855-11428874 | None:intergenic | 35.0% | |
| ATTCTCAAATCCTCTGATCA+TGG | - | chr8.4:11429509-11429528 | None:intergenic | 35.0% | |
| CAATGAATTAGCCAGTGAAA+CGG | - | chr8.4:11431569-11431588 | None:intergenic | 35.0% | |
| CACTAAAGGAAAAACTACCT+GGG | - | chr8.4:11430838-11430857 | None:intergenic | 35.0% | |
| CATACAGAAAGGTCAGAATT+TGG | - | chr8.4:11430484-11430503 | None:intergenic | 35.0% | |
| CTAGAATCTTCTGTAAGTCT+TGG | - | chr8.4:11429747-11429766 | None:intergenic | 35.0% | |
| CTAGTTGCACTAGAATGATA+TGG | - | chr8.4:11431351-11431370 | None:intergenic | 35.0% | |
| CTTCTTGTAACTGTTCTACA+GGG | + | chr8.4:11432035-11432054 | MS.gene68595:intron | 35.0% | |
| GAAAAGTTACTCTTCGTCAT+AGG | + | chr8.4:11430226-11430245 | MS.gene68595:intron | 35.0% | |
| GACGATTTAACATGTACATC+AGG | + | chr8.4:11431709-11431728 | MS.gene68595:intron | 35.0% | |
| GATCGCAAATATGCTTACAT+GGG | - | chr8.4:11430962-11430981 | None:intergenic | 35.0% | |
| GATTCTAGCCATACAAGATA+TGG | + | chr8.4:11429759-11429778 | MS.gene68595:intron | 35.0% | |
| GGAGTAAACCAACTTGATTA+TGG | + | chr8.4:11429887-11429906 | MS.gene68595:intron | 35.0% | |
| GTCAGAGGTTTCAGAATTTA+TGG | + | chr8.4:11431314-11431333 | MS.gene68595:intron | 35.0% | |
| TACAAACGTTTAGGTGTATG+AGG | + | chr8.4:11429921-11429940 | MS.gene68595:intron | 35.0% | |
| TACAGAACTAAAATTGGCCA+AGG | + | chr8.4:11430369-11430388 | MS.gene68595:CDS | 35.0% | |
| TCAGACTGCTAAATGAGAAA+GGG | - | chr8.4:11431392-11431411 | None:intergenic | 35.0% | |
| TCAGAGGATTTGAGAATACA+TGG | + | chr8.4:11429512-11429531 | MS.gene68595:CDS | 35.0% | |
| TCATATGGAATGAAGTGATG+AGG | + | chr8.4:11430721-11430740 | MS.gene68595:CDS | 35.0% | |
| TCTGGACTATTCTGATAACT+GGG | + | chr8.4:11432081-11432100 | MS.gene68595:CDS | 35.0% | |
| TCTTGTCTTCTTCTCTTTAG+CGG | - | chr8.4:11432357-11432376 | None:intergenic | 35.0% | |
| TGAGAATACATGGAAGTAGA+TGG | + | chr8.4:11429522-11429541 | MS.gene68595:intron | 35.0% | |
| TGTATGCTTACTTACTGTTC+TGG | + | chr8.4:11431148-11431167 | MS.gene68595:CDS | 35.0% | |
| TTATCAGAATAGTCCAGAAG+AGG | - | chr8.4:11432079-11432098 | None:intergenic | 35.0% | |
| TTATGCCAAGCAGTTACATT+AGG | - | chr8.4:11429573-11429592 | None:intergenic | 35.0% | |
| TTCAGACTGCTAAATGAGAA+AGG | - | chr8.4:11431393-11431412 | None:intergenic | 35.0% | |
| TTCTGGACTATTCTGATAAC+TGG | + | chr8.4:11432080-11432099 | MS.gene68595:CDS | 35.0% | |
| ! | AATGTCATTTGCGTCAACAT+TGG | + | chr8.4:11429631-11429650 | MS.gene68595:intron | 35.0% |
| ! | ATTTTTGATGTGAAAGGGGA+TGG | + | chr8.4:11429654-11429673 | MS.gene68595:intron | 35.0% |
| ! | GAAGACAAGACCATTTTATC+GGG | + | chr8.4:11432367-11432386 | MS.gene68595:CDS | 35.0% |
| ! | TTTTTCGTATGGGAATTGAC+TGG | + | chr8.4:11430406-11430425 | MS.gene68595:CDS | 35.0% |
| !! | CTGTGTTACTGTTTTTCGTA+TGG | + | chr8.4:11430395-11430414 | MS.gene68595:CDS | 35.0% |
| !! | GATTCTTTAAGGCTGTTTAC+TGG | - | chr8.4:11430454-11430473 | None:intergenic | 35.0% |
| !! | TTCATCATAAGAAGCGCTTA+TGG | + | chr8.4:11429083-11429102 | MS.gene68595:intron | 35.0% |
| !!! | GCCAATTTTAGTTCTGTATC+AGG | - | chr8.4:11430367-11430386 | None:intergenic | 35.0% |
| AAAATTGAGTCATCCTCAGC+AGG | - | chr8.4:11430890-11430909 | None:intergenic | 40.0% | |
| AACATGCGATATAAGCCATC+AGG | - | chr8.4:11431806-11431825 | None:intergenic | 40.0% | |
| AATGCTCCAAGAGATATGGT+CGG | - | chr8.4:11431916-11431935 | None:intergenic | 40.0% | |
| ACAAAGCAAGTGAGAGCTTA+CGG | - | chr8.4:11429606-11429625 | None:intergenic | 40.0% | |
| ACAGTGACTTGAGTTTAAGG+GGG | - | chr8.4:11429867-11429886 | None:intergenic | 40.0% | |
| ACCGAGCAAATAATCTTGCA+CGG | + | chr8.4:11432150-11432169 | MS.gene68595:CDS | 40.0% | |
| ACTATTCTGATAACTGGGAG+TGG | + | chr8.4:11432086-11432105 | MS.gene68595:CDS | 40.0% | |
| ACTGCTAAATGAGAAAGGGT+GGG | - | chr8.4:11431388-11431407 | None:intergenic | 40.0% | |
| ACTTACAACCTGCAATCAAG+AGG | - | chr8.4:11432280-11432299 | None:intergenic | 40.0% | |
| ATACATGGAAGTAGATGGAC+AGG | + | chr8.4:11429527-11429546 | MS.gene68595:intron | 40.0% | |
| ATGAGGATGCCTATAGAAGA+AGG | + | chr8.4:11429938-11429957 | MS.gene68595:intron | 40.0% | |
| ATGCCTATAGAAGAAGGCAA+TGG | + | chr8.4:11429944-11429963 | MS.gene68595:intron | 40.0% | |
| ATGCCTGATAGATACACTCA+TGG | + | chr8.4:11430014-11430033 | MS.gene68595:intron | 40.0% | |
| CAAATATTCACCTGAGTTCG+TGG | - | chr8.4:11431295-11431314 | None:intergenic | 40.0% | |
| CACAGTGACTTGAGTTTAAG+GGG | - | chr8.4:11429868-11429887 | None:intergenic | 40.0% | |
| CACATGTTCTCAATCAATGC+AGG | + | chr8.4:11431058-11431077 | MS.gene68595:intron | 40.0% | |
| CAGCAATATCAACAGACCAT+AGG | - | chr8.4:11431546-11431565 | None:intergenic | 40.0% | |
| CCACAGTGACTTGAGTTTAA+GGG | - | chr8.4:11429869-11429888 | None:intergenic | 40.0% | |
| CCACTAAAGGAAAAACTACC+TGG | - | chr8.4:11430839-11430858 | None:intergenic | 40.0% | |
| CCTGTAGAACAGTTACAAGA+AGG | - | chr8.4:11432037-11432056 | None:intergenic | 40.0% | |
| CCTTCTTGTAACTGTTCTAC+AGG | + | chr8.4:11432034-11432053 | MS.gene68595:intron | 40.0% | |
| CGAGAGAAGGAAAAATGCAT+TGG | - | chr8.4:11428771-11428790 | None:intergenic | 40.0% | |
| CTATTCTGATAACTGGGAGT+GGG | + | chr8.4:11432087-11432106 | MS.gene68595:CDS | 40.0% | |
| CTCAGGTGAATATTTGTCAG+AGG | + | chr8.4:11431299-11431318 | MS.gene68595:CDS | 40.0% | |
| CTTCCATGAGTGTATCTATC+AGG | - | chr8.4:11430020-11430039 | None:intergenic | 40.0% | |
| GAAGTCTCTTAAGGTAGCTA+TGG | + | chr8.4:11429480-11429499 | MS.gene68595:CDS | 40.0% | |
| GAGAAGGAAAAATGCATTGG+CGG | - | chr8.4:11428768-11428787 | None:intergenic | 40.0% | |
| GAGCTTAGTATGAGAAGACT+AGG | + | chr8.4:11430078-11430097 | MS.gene68595:intron | 40.0% | |
| GATATCTGTTGCACACTCAA+AGG | + | chr8.4:11431255-11431274 | MS.gene68595:CDS | 40.0% | |
| GCAGAAAGTAGATGCTTTGA+TGG | + | chr8.4:11429388-11429407 | MS.gene68595:intron | 40.0% | |
| GGGTAACAAGAAGTCTCTTA+AGG | + | chr8.4:11429471-11429490 | MS.gene68595:CDS | 40.0% | |
| GTAAGCATACAGAAGACATG+GGG | - | chr8.4:11431139-11431158 | None:intergenic | 40.0% | |
| GTTAGGATCGAAATCAAACC+TGG | - | chr8.4:11431653-11431672 | None:intergenic | 40.0% | |
| TAAATAAGCTGCTATCCTGG+TGG | + | chr8.4:11429158-11429177 | MS.gene68595:intron | 40.0% | |
| TATCGGAGGATTCATCGATA+GGG | - | chr8.4:11428826-11428845 | None:intergenic | 40.0% | |
| TCATCGATAGGGAAGTGAAA+CGG | - | chr8.4:11428815-11428834 | None:intergenic | 40.0% | |
| TCCACAGTGACTTGAGTTTA+AGG | - | chr8.4:11429870-11429889 | None:intergenic | 40.0% | |
| TCCGTGCAAGATTATTTGCT+CGG | - | chr8.4:11432154-11432173 | None:intergenic | 40.0% | |
| TGATTACAATCCACGAACTC+AGG | + | chr8.4:11431282-11431301 | MS.gene68595:CDS | 40.0% | |
| TGCAACAGATATCCAATGCA+TGG | - | chr8.4:11431248-11431267 | None:intergenic | 40.0% | |
| TGTACATCAGGAAGCGATTT+CGG | + | chr8.4:11431721-11431740 | MS.gene68595:intron | 40.0% | |
| TGTCCATTGCCTTCTTCTAT+AGG | - | chr8.4:11429950-11429969 | None:intergenic | 40.0% | |
| TGTTTATGCTGCTATGATCG+AGG | + | chr8.4:11431943-11431962 | MS.gene68595:CDS | 40.0% | |
| TTAGGTCAACTATGCTGCAT+TGG | + | chr8.4:11430666-11430685 | MS.gene68595:intron | 40.0% | |
| TTCACTTGGCGTTCTTTCTT+AGG | + | chr8.4:11430648-11430667 | MS.gene68595:intron | 40.0% | |
| TTTAATGGCCTCTTGATTGC+AGG | + | chr8.4:11432269-11432288 | MS.gene68595:intron | 40.0% | |
| TTTGTTGCGAAAACGAGAGA+AGG | - | chr8.4:11428784-11428803 | None:intergenic | 40.0% | |
| ! | AATCTCTTTTGCCAGATGCA+TGG | - | chr8.4:11430612-11430631 | None:intergenic | 40.0% |
| ! | ATATTAGTGGATGGAGCTCA+TGG | + | chr8.4:11430537-11430556 | MS.gene68595:intron | 40.0% |
| ! | CATCATTTTCCACAAGCTTC+AGG | - | chr8.4:11431754-11431773 | None:intergenic | 40.0% |
| ! | CCAGGTAGTTTTTCCTTTAG+TGG | + | chr8.4:11430836-11430855 | MS.gene68595:CDS | 40.0% |
| ! | CGCCTATAAGTCCATCATTT+TGG | - | chr8.4:11431618-11431637 | None:intergenic | 40.0% |
| !! | AATCAATGCAGGCTTGTTGT+TGG | + | chr8.4:11431069-11431088 | MS.gene68595:intron | 40.0% |
| !! | ATTTTCAGGGAGGGAGATTA+AGG | + | chr8.4:11430330-11430349 | MS.gene68595:intron | 40.0% |
| !! | TAATGCCTGATTTTCAGGGA+GGG | + | chr8.4:11430321-11430340 | MS.gene68595:intron | 40.0% |
| !! | TTAATGCCTGATTTTCAGGG+AGG | + | chr8.4:11430320-11430339 | MS.gene68595:intron | 40.0% |
| !! | TTACTTACTGTTCTGGAACC+TGG | + | chr8.4:11431155-11431174 | MS.gene68595:CDS | 40.0% |
| AATCTCCCTCCCTGAAAATC+AGG | - | chr8.4:11430329-11430348 | None:intergenic | 45.0% | |
| ATCTACTTTCTGCTCAGCAC+CGG | - | chr8.4:11429381-11429400 | None:intergenic | 45.0% | |
| ATGGAAGTAGATGGACAGGA+AGG | + | chr8.4:11429531-11429550 | MS.gene68595:intron | 45.0% | |
| CAGTGACTTGAGTTTAAGGG+GGG | - | chr8.4:11429866-11429885 | None:intergenic | 45.0% | |
| CCCTTAAACTCAAGTCACTG+TGG | + | chr8.4:11429866-11429885 | MS.gene68595:intron | 45.0% | |
| CTAAATGAGAAAGGGTGGGA+AGG | - | chr8.4:11431384-11431403 | None:intergenic | 45.0% | |
| CTTCCAACCTCCATAATCAC+CGG | - | chr8.4:11430781-11430800 | None:intergenic | 45.0% | |
| GAAAACACCTGTAGGAAGTG+CGG | - | chr8.4:11431218-11431237 | None:intergenic | 45.0% | |
| GACTGCTAAATGAGAAAGGG+TGG | - | chr8.4:11431389-11431408 | None:intergenic | 45.0% | |
| GATCATCGCGTGTACCTTTA+CGG | - | chr8.4:11432304-11432323 | None:intergenic | 45.0% | |
| GATGGATATGGTCCCAAGTT+TGG | + | chr8.4:11432112-11432131 | MS.gene68595:CDS | 45.0% | |
| GTACATCAGGAAGCGATTTC+GGG | + | chr8.4:11431722-11431741 | MS.gene68595:intron | 45.0% | |
| GTATCGGAGGATTCATCGAT+AGG | - | chr8.4:11428827-11428846 | None:intergenic | 45.0% | |
| GTCTCTTAAGGTAGCTATGG+AGG | + | chr8.4:11429483-11429502 | MS.gene68595:CDS | 45.0% | |
| TAGGCGTTAACTATTACGCC+AGG | + | chr8.4:11431632-11431651 | MS.gene68595:intron | 45.0% | |
| TATCGGGCTGTGGACAAAAA+TGG | + | chr8.4:11432383-11432402 | MS.gene68595:CDS | 45.0% | |
| TGATTATGGAGGTTGGAAGC+TGG | + | chr8.4:11430782-11430801 | MS.gene68595:CDS | 45.0% | |
| TGGACATCCTGATATGCTAG+AGG | + | chr8.4:11431183-11431202 | MS.gene68595:CDS | 45.0% | |
| TTGAAGCTGACTGCACTACT+TGG | + | chr8.4:11431416-11431435 | MS.gene68595:intron | 45.0% | |
| TTGATGTGAAAGGGGATGGT+GGG | + | chr8.4:11429658-11429677 | MS.gene68595:intron | 45.0% | |
| TTGGAAGCTGGAAAAGACAG+TGG | + | chr8.4:11430794-11430813 | MS.gene68595:CDS | 45.0% | |
| TTGTCCACAGCCCGATAAAA+TGG | - | chr8.4:11432380-11432399 | None:intergenic | 45.0% | |
| TTTGATGTGAAAGGGGATGG+TGG | + | chr8.4:11429657-11429676 | MS.gene68595:intron | 45.0% | |
| TTTGCCAGATGCATGGTCAA+TGG | - | chr8.4:11430605-11430624 | None:intergenic | 45.0% | |
| ! | AAGACCATTTTATCGGGCTG+TGG | + | chr8.4:11432373-11432392 | MS.gene68595:CDS | 45.0% |
| ! | GCAGGTTGTAAGTACCGTAA+AGG | + | chr8.4:11432287-11432306 | MS.gene68595:intron | 45.0% |
| ! | GTTGAAATCGGCGAGAGTAT+CGG | - | chr8.4:11428843-11428862 | None:intergenic | 45.0% |
| ! | TGATATTGCTGCCGTTTCAC+TGG | + | chr8.4:11431555-11431574 | MS.gene68595:intron | 45.0% |
| !! | ATTTTGACAAGCTCACCACC+AGG | - | chr8.4:11429176-11429195 | None:intergenic | 45.0% |
| !! | TATCAAAAAAAATTTAAATA+AGG | - | chr8.4:11430176-11430195 | None:intergenic | 5.0% |
| AACAGATGGTAAGAAGGGCG+AGG | - | chr8.4:11432179-11432198 | None:intergenic | 50.0% | |
| AATGAGAAAGGGTGGGAAGG+CGG | - | chr8.4:11431381-11431400 | None:intergenic | 50.0% | |
| ACACACAGACACACACACAG+AGG | - | chr8.4:11430261-11430280 | None:intergenic | 50.0% | |
| ACCTGCGACAAGTCCAAACT+TGG | - | chr8.4:11432128-11432147 | None:intergenic | 50.0% | |
| AGACACACACACAGAGGACT+CGG | - | chr8.4:11430255-11430274 | None:intergenic | 50.0% | |
| AGCATATCAGGATGTCCACC+AGG | - | chr8.4:11431181-11431200 | None:intergenic | 50.0% | |
| ATATCCAATGCATGGCCTGC+TGG | - | chr8.4:11431240-11431259 | None:intergenic | 50.0% | |
| CAAGTGAGAGCTTACGGATG+TGG | - | chr8.4:11429600-11429619 | None:intergenic | 50.0% | |
| CAGAAGAGGTAACCAAGCAC+AGG | - | chr8.4:11432065-11432084 | None:intergenic | 50.0% | |
| CAGGGAGGGAGATTAAGGTT+TGG | + | chr8.4:11430335-11430354 | MS.gene68595:intron | 50.0% | |
| CCATATCATCTGCGCAACGA+GGG | + | chr8.4:11429443-11429462 | MS.gene68595:CDS | 50.0% | |
| CCTAACTGCCACTAAACTCG+CGG | + | chr8.4:11428718-11428737 | MS.gene68595:CDS | 50.0% | |
| CCTGCGACAAGTCCAAACTT+GGG | - | chr8.4:11432127-11432146 | None:intergenic | 50.0% | |
| CTGACCATTGACCATGCATC+TGG | + | chr8.4:11430598-11430617 | MS.gene68595:intron | 50.0% | |
| CTGTGCTTGGTTACCTCTTC+TGG | + | chr8.4:11432063-11432082 | MS.gene68595:CDS | 50.0% | |
| GAGTACAGTGAATCTGGACG+TGG | + | chr8.4:11431773-11431792 | MS.gene68595:CDS | 50.0% | |
| GGACGTGGAGTATATCCTGA+TGG | + | chr8.4:11431788-11431807 | MS.gene68595:CDS | 50.0% | |
| GTAGCAGCCTCTAGCATATC+AGG | - | chr8.4:11431193-11431212 | None:intergenic | 50.0% | |
| TACAAGCTCCGCGAGTTTAG+TGG | - | chr8.4:11428729-11428748 | None:intergenic | 50.0% | |
| TCATCACTCACTTCCACCCT+GGG | + | chr8.4:11430755-11430774 | MS.gene68595:CDS | 50.0% | |
| TTCATCACTCACTTCCACCC+TGG | + | chr8.4:11430754-11430773 | MS.gene68595:CDS | 50.0% | |
| ! | CTGCATTGGAGCGCTATAAG+TGG | + | chr8.4:11430680-11430699 | MS.gene68595:intron | 50.0% |
| ! | GCGATGATCGTGATAACGCT+TGG | + | chr8.4:11432315-11432334 | MS.gene68595:CDS | 50.0% |
| ! | TCCTACAGGTGTTTTCCAGC+AGG | + | chr8.4:11431222-11431241 | MS.gene68595:CDS | 50.0% |
| ! | TTTTCCAGCAGGCCATGCAT+TGG | + | chr8.4:11431233-11431252 | MS.gene68595:CDS | 50.0% |
| !! | AGGACAGGCTTGATGATGCT+TGG | + | chr8.4:11429327-11429346 | MS.gene68595:CDS | 50.0% |
| !! | AGGCTGTTTACTGGCTCATG+AGG | - | chr8.4:11430445-11430464 | None:intergenic | 50.0% |
| !! | CTCGCCGATTTCAACAGTAC+CGG | + | chr8.4:11428848-11428867 | MS.gene68595:CDS | 50.0% |
| !! | GCTGAACAAGAGAGTGTTGC+CGG | + | chr8.4:11429359-11429378 | MS.gene68595:CDS | 50.0% |
| !! | TGTGTCGTTTAGCGACCCTA+TGG | + | chr8.4:11431527-11431546 | MS.gene68595:CDS | 50.0% |
| AGCCTGTCCTCAACATGTGC+CGG | - | chr8.4:11429317-11429336 | None:intergenic | 55.0% | |
| ATCTGCGCAACGAGGGCTTA+AGG | + | chr8.4:11429450-11429469 | MS.gene68595:CDS | 55.0% | |
| CCCAAGTTTGGACTTGTCGC+AGG | + | chr8.4:11432124-11432143 | MS.gene68595:CDS | 55.0% | |
| CCCTCGTTGCGCAGATGATA+TGG | - | chr8.4:11429446-11429465 | None:intergenic | 55.0% | |
| CCGCGAGTTTAGTGGCAGTT+AGG | - | chr8.4:11428721-11428740 | None:intergenic | 55.0% | |
| CTTTGGTCTAGCGACAGCAC+CGG | + | chr8.4:11429295-11429314 | MS.gene68595:CDS | 55.0% | |
| GATCCGCCGACCATATCTCT+TGG | + | chr8.4:11431907-11431926 | MS.gene68595:CDS | 55.0% | |
| GCCATATCATCTGCGCAACG+AGG | + | chr8.4:11429442-11429461 | MS.gene68595:intron | 55.0% | |
| GCCTGCTGGAAAACACCTGT+AGG | - | chr8.4:11431226-11431245 | None:intergenic | 55.0% | |
| GCTACTTCCGCACTTCCTAC+AGG | + | chr8.4:11431208-11431227 | MS.gene68595:CDS | 55.0% | |
| GCTATGGAGGCCATGATCAG+AGG | + | chr8.4:11429496-11429515 | MS.gene68595:CDS | 55.0% | |
| GCTCCAAGAGATATGGTCGG+CGG | - | chr8.4:11431913-11431932 | None:intergenic | 55.0% | |
| TCGTCGCGTGAGTACATGTC+TGG | - | chr8.4:11431694-11431713 | None:intergenic | 55.0% | |
| TCTGCGCAACGAGGGCTTAA+GGG | + | chr8.4:11429451-11429470 | MS.gene68595:CDS | 55.0% | |
| TTGAGACCCACCATCAGCAG+TGG | - | chr8.4:11429419-11429438 | None:intergenic | 55.0% | |
| !! | GAAATCGGCGAGAGTATCGG+AGG | - | chr8.4:11428840-11428859 | None:intergenic | 55.0% |
| !! | GATAACTGGGAGTGGGCTGA+TGG | + | chr8.4:11432094-11432113 | MS.gene68595:CDS | 55.0% |
| !! | TACTGTTCTGGAACCTGGCC+TGG | + | chr8.4:11431160-11431179 | MS.gene68595:CDS | 55.0% |
| !! | TGGGAGTGGGCTGATGGATA+TGG | + | chr8.4:11432100-11432119 | MS.gene68595:CDS | 55.0% |
| ACCTCCATAATCACCGGCCC+AGG | - | chr8.4:11430775-11430794 | None:intergenic | 60.0% | |
| ATCAGGATGTCCACCAGGCC+AGG | - | chr8.4:11431176-11431195 | None:intergenic | 60.0% | |
| CACCGGCACATGTTGAGGAC+AGG | + | chr8.4:11429312-11429331 | MS.gene68595:CDS | 60.0% | |
| CCATCGAACTCTGCCTGCTG+AGG | + | chr8.4:11430874-11430893 | MS.gene68595:intron | 60.0% | |
| CCTCAGCAGGCAGAGTTCGA+TGG | - | chr8.4:11430877-11430896 | None:intergenic | 60.0% | |
| CCTCCATAATCACCGGCCCA+GGG | - | chr8.4:11430774-11430793 | None:intergenic | 60.0% | |
| CTACAGGGTGTGCCTGTGCT+TGG | + | chr8.4:11432050-11432069 | MS.gene68595:intron | 60.0% | |
| GCTCTGCCACTGCTGATGGT+GGG | + | chr8.4:11429410-11429429 | MS.gene68595:intron | 60.0% | |
| GGGCCGGTGATTATGGAGGT+TGG | + | chr8.4:11430775-11430794 | MS.gene68595:CDS | 60.0% | |
| ! | CAGGAAGCGATTTCGGGTGC+TGG | + | chr8.4:11431728-11431747 | MS.gene68595:intron | 60.0% |
| ! | GATGGCTCTGCCACTGCTGA+TGG | + | chr8.4:11429406-11429425 | MS.gene68595:intron | 60.0% |
| !! | GACAGCACCGGCACATGTTG+AGG | + | chr8.4:11429307-11429326 | MS.gene68595:CDS | 60.0% |
| !! | TGTTCTGGAACCTGGCCTGG+TGG | + | chr8.4:11431163-11431182 | MS.gene68595:CDS | 60.0% |
| CACTCACTTCCACCCTGGGC+CGG | + | chr8.4:11430759-11430778 | MS.gene68595:CDS | 65.0% | |
| CCACCCTGGGCCGGTGATTA+TGG | + | chr8.4:11430768-11430787 | MS.gene68595:CDS | 65.0% | |
| CCATAATCACCGGCCCAGGG+TGG | - | chr8.4:11430771-11430790 | None:intergenic | 65.0% | |
| CCCTGGGCCGGTGATTATGG+AGG | + | chr8.4:11430771-11430790 | MS.gene68595:CDS | 65.0% | |
| GGCTCTGCCACTGCTGATGG+TGG | + | chr8.4:11429409-11429428 | MS.gene68595:intron | 65.0% | |
| !! | GGGTGCTGGCCTGAAGCTTG+TGG | + | chr8.4:11431742-11431761 | MS.gene68595:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 11428698 | 11432419 | 11428698 | ID=MS.gene68595 |
| chr8.4 | mRNA | 11428698 | 11432419 | 11428698 | ID=MS.gene68595.t1;Parent=MS.gene68595 |
| chr8.4 | exon | 11428698 | 11428869 | 11428698 | ID=MS.gene68595.t1.exon1;Parent=MS.gene68595.t1 |
| chr8.4 | CDS | 11428698 | 11428869 | 11428698 | ID=cds.MS.gene68595.t1;Parent=MS.gene68595.t1 |
| chr8.4 | exon | 11429276 | 11429380 | 11429276 | ID=MS.gene68595.t1.exon2;Parent=MS.gene68595.t1 |
| chr8.4 | CDS | 11429276 | 11429380 | 11429276 | ID=cds.MS.gene68595.t1;Parent=MS.gene68595.t1 |
| chr8.4 | exon | 11429443 | 11429536 | 11429443 | ID=MS.gene68595.t1.exon3;Parent=MS.gene68595.t1 |
| chr8.4 | CDS | 11429443 | 11429536 | 11429443 | ID=cds.MS.gene68595.t1;Parent=MS.gene68595.t1 |
| chr8.4 | exon | 11430342 | 11430474 | 11430342 | ID=MS.gene68595.t1.exon4;Parent=MS.gene68595.t1 |
| chr8.4 | CDS | 11430342 | 11430474 | 11430342 | ID=cds.MS.gene68595.t1;Parent=MS.gene68595.t1 |
| chr8.4 | exon | 11430714 | 11430867 | 11430714 | ID=MS.gene68595.t1.exon5;Parent=MS.gene68595.t1 |
| chr8.4 | CDS | 11430714 | 11430867 | 11430714 | ID=cds.MS.gene68595.t1;Parent=MS.gene68595.t1 |
| chr8.4 | exon | 11431080 | 11431320 | 11431080 | ID=MS.gene68595.t1.exon6;Parent=MS.gene68595.t1 |
| chr8.4 | CDS | 11431080 | 11431320 | 11431080 | ID=cds.MS.gene68595.t1;Parent=MS.gene68595.t1 |
| chr8.4 | exon | 11431491 | 11431548 | 11431491 | ID=MS.gene68595.t1.exon7;Parent=MS.gene68595.t1 |
| chr8.4 | CDS | 11431491 | 11431548 | 11431491 | ID=cds.MS.gene68595.t1;Parent=MS.gene68595.t1 |
| chr8.4 | exon | 11431731 | 11431964 | 11431731 | ID=MS.gene68595.t1.exon8;Parent=MS.gene68595.t1 |
| chr8.4 | CDS | 11431731 | 11431964 | 11431731 | ID=cds.MS.gene68595.t1;Parent=MS.gene68595.t1 |
| chr8.4 | exon | 11432056 | 11432205 | 11432056 | ID=MS.gene68595.t1.exon9;Parent=MS.gene68595.t1 |
| chr8.4 | CDS | 11432056 | 11432205 | 11432056 | ID=cds.MS.gene68595.t1;Parent=MS.gene68595.t1 |
| chr8.4 | exon | 11432299 | 11432419 | 11432299 | ID=MS.gene68595.t1.exon10;Parent=MS.gene68595.t1 |
| chr8.4 | CDS | 11432299 | 11432419 | 11432299 | ID=cds.MS.gene68595.t1;Parent=MS.gene68595.t1 |
| Gene Sequence |
| Protein sequence |
