Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68943.t1 | XP_003610455.1 | 98.5 | 196 | 3 | 0 | 7 | 202 | 72 | 267 | 6.90E-106 | 393.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68943.t1 | G7JJ95 | 98.5 | 196 | 3 | 0 | 7 | 202 | 72 | 267 | 5.0e-106 | 393.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049396 | MS.gene68943 | 0.820574 | 6.38E-53 | -1.69E-46 |
| MS.gene049488 | MS.gene68943 | 0.801992 | 6.93E-49 | -1.69E-46 |
| MS.gene049757 | MS.gene68943 | 0.829023 | 6.49E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene68943 | 0.802011 | 6.87E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene68943 | 0.832566 | 8.78E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene68943 | 0.802287 | 6.03E-49 | -1.69E-46 |
| MS.gene051521 | MS.gene68943 | 0.801339 | 9.43E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene68943 | 0.830667 | 2.58E-55 | -1.69E-46 |
| MS.gene051588 | MS.gene68943 | 0.812251 | 4.66E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene68943 | 0.808499 | 3.01E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene68943 | 0.804543 | 2.05E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene68943 | 0.807654 | 4.55E-50 | -1.69E-46 |
| MS.gene053169 | MS.gene68943 | 0.848786 | 4.91E-60 | -1.69E-46 |
| MS.gene05383 | MS.gene68943 | 0.819204 | 1.31E-52 | -1.69E-46 |
| MS.gene053912 | MS.gene68943 | 0.825051 | 5.79E-54 | -1.69E-46 |
| MS.gene054107 | MS.gene68943 | 0.847185 | 1.36E-59 | -1.69E-46 |
| MS.gene054556 | MS.gene68943 | 0.822759 | 1.99E-53 | -1.69E-46 |
| MS.gene055369 | MS.gene68943 | 0.857719 | 1.35E-62 | -1.69E-46 |
| MS.gene055539 | MS.gene68943 | 0.801212 | 1.00E-48 | -1.69E-46 |
| MS.gene05553 | MS.gene68943 | 0.80162 | 8.26E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene68943 | 0.859973 | 2.86E-63 | -1.69E-46 |
| MS.gene055744 | MS.gene68943 | 0.866176 | 3.45E-65 | -1.69E-46 |
| MS.gene055909 | MS.gene68943 | 0.818959 | 1.49E-52 | -1.69E-46 |
| MS.gene055911 | MS.gene68943 | 0.823177 | 1.59E-53 | -1.69E-46 |
| MS.gene056040 | MS.gene68943 | 0.812389 | 4.35E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene68943 | 0.831551 | 1.57E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene68943 | 0.817024 | 4.09E-52 | -1.69E-46 |
| MS.gene056514 | MS.gene68943 | 0.872924 | 2.19E-67 | -1.69E-46 |
| MS.gene056877 | MS.gene68943 | 0.811796 | 5.85E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene68943 | 0.825863 | 3.72E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene68943 | 0.802671 | 5.02E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene68943 | 0.826422 | 2.74E-54 | -1.69E-46 |
| MS.gene058007 | MS.gene68943 | 0.808979 | 2.37E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene68943 | 0.83788 | 4.00E-57 | -1.69E-46 |
| MS.gene059420 | MS.gene68943 | 0.808585 | 2.88E-50 | -1.69E-46 |
| MS.gene059868 | MS.gene68943 | 0.819555 | 1.09E-52 | -1.69E-46 |
| MS.gene060372 | MS.gene68943 | 0.855564 | 5.80E-62 | -1.69E-46 |
| MS.gene060835 | MS.gene68943 | 0.803311 | 3.70E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene68943 | 0.810398 | 1.18E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68943.t1 | MTR_4g132350 | 98.469 | 196 | 3 | 0 | 7 | 202 | 72 | 267 | 1.90e-145 | 405 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68943.t1 | AT1G62250 | 73.469 | 196 | 51 | 1 | 8 | 202 | 72 | 267 | 1.18e-104 | 302 |
| MS.gene68943.t1 | AT1G62250 | 73.469 | 196 | 51 | 1 | 8 | 202 | 72 | 267 | 1.18e-104 | 302 |
| MS.gene68943.t1 | AT1G62250 | 69.079 | 152 | 46 | 1 | 8 | 158 | 72 | 223 | 1.53e-74 | 224 |
Find 49 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAATTGAAGAGTCTTTAC+AGG | 0.293625 | 8.2:-1734119 | None:intergenic |
| GGTGCACTGATGAGGGATTA+AGG | 0.315940 | 8.2:+1733624 | MS.gene68943:CDS |
| TTTCAGGAGTTCATCACTGC+TGG | 0.339359 | 8.2:+1733581 | MS.gene68943:intron |
| TCACCTTGTTCAGGAGATAT+AGG | 0.401117 | 8.2:+1732839 | MS.gene68943:CDS |
| GACTCTTCAATTAGAGCAAA+CGG | 0.420903 | 8.2:+1734127 | MS.gene68943:CDS |
| ACATAGCCATCACCTTGTTC+AGG | 0.430952 | 8.2:+1732830 | MS.gene68943:CDS |
| TTCAGGAGTTCATCACTGCT+GGG | 0.433998 | 8.2:+1733582 | MS.gene68943:intron |
| GATCTCATTGTCTATACTCT+TGG | 0.455261 | 8.2:-1734363 | None:intergenic |
| GCCTATGCTTACCCTCAAAC+AGG | 0.467145 | 8.2:+1732292 | None:intergenic |
| TGCTGAAGACTAATCGCATT+CGG | 0.468961 | 8.2:-1734190 | None:intergenic |
| ATTAGAATCATAGACCTCAT+TGG | 0.478062 | 8.2:-1733738 | None:intergenic |
| CCCCGCCGACTATTGTTAGA+TGG | 0.484658 | 8.2:+1733911 | MS.gene68943:CDS |
| ATTAGAGCAAACGGCAGTGA+TGG | 0.502471 | 8.2:+1734136 | MS.gene68943:CDS |
| ACCATCTAACAATAGTCGGC+GGG | 0.507708 | 8.2:-1733912 | None:intergenic |
| GGGGTGAATGCATATGAACT+TGG | 0.519443 | 8.2:+1733602 | MS.gene68943:CDS |
| AAGAGGGATATACCTGTTTG+AGG | 0.523927 | 8.2:-1732304 | None:intergenic |
| AGAGGGATATACCTGTTTGA+GGG | 0.543625 | 8.2:-1732303 | None:intergenic |
| AATTTCACTGATCGTGGTGG+AGG | 0.547938 | 8.2:+1732862 | MS.gene68943:CDS |
| ATTGAAGCAATGCAAAGTTA+CGG | 0.554118 | 8.2:+1733683 | MS.gene68943:CDS |
| TTAGAGCAAACGGCAGTGAT+GGG | 0.555480 | 8.2:+1734137 | MS.gene68943:CDS |
| GAAAGAGCTTACTGACATGA+AGG | 0.564447 | 8.2:+1733646 | MS.gene68943:CDS |
| CTTACTGACATGAAGGACTC+TGG | 0.574764 | 8.2:+1733653 | MS.gene68943:CDS |
| ATTAGTCTTCAGCACCCTTG+AGG | 0.597661 | 8.2:+1734199 | MS.gene68943:CDS |
| ATATCTCCTGAACAAGGTGA+TGG | 0.598635 | 8.2:-1732836 | None:intergenic |
| ATCTAAAATCATATCCAATG+AGG | 0.600286 | 8.2:+1733724 | MS.gene68943:CDS |
| GATGACCATCTAACAATAGT+CGG | 0.602090 | 8.2:-1733916 | None:intergenic |
| TGAACTTGGGTGCACTGATG+AGG | 0.602547 | 8.2:+1733616 | MS.gene68943:CDS |
| CCATCTAACAATAGTCGGCG+GGG | 0.607770 | 8.2:-1733911 | None:intergenic |
| ACCTGTTTGAGGGTAAGCAT+AGG | 0.609631 | 8.2:-1732293 | None:intergenic |
| TATAGGAATTTCACTGATCG+TGG | 0.622160 | 8.2:+1732856 | MS.gene68943:CDS |
| AAGCAATGCAAAGTTACGGT+GGG | 0.622956 | 8.2:+1733687 | MS.gene68943:CDS |
| ATGTAAATTACTGACCTCAA+GGG | 0.624330 | 8.2:-1734213 | None:intergenic |
| GAAGTGAGACTTCAGTGGAA+AGG | 0.627135 | 8.2:+1733958 | MS.gene68943:CDS |
| GACCATCTAACAATAGTCGG+CGG | 0.629148 | 8.2:-1733913 | None:intergenic |
| GAACTTGGGTGCACTGATGA+GGG | 0.632248 | 8.2:+1733617 | MS.gene68943:CDS |
| GGGTGAATGCATATGAACTT+GGG | 0.632813 | 8.2:+1733603 | MS.gene68943:CDS |
| CATCTAACAATAGTCGGCGG+GGG | 0.635463 | 8.2:-1733910 | None:intergenic |
| TCAGGAGTTCATCACTGCTG+GGG | 0.635874 | 8.2:+1733583 | MS.gene68943:intron |
| ATTCCTATATCTCCTGAACA+AGG | 0.635905 | 8.2:-1732842 | None:intergenic |
| GAAGCAATGCAAAGTTACGG+TGG | 0.636433 | 8.2:+1733686 | MS.gene68943:CDS |
| AGGAATTTCACTGATCGTGG+TGG | 0.644671 | 8.2:+1732859 | MS.gene68943:CDS |
| GTCTATACTCTTGGCCACTG+TGG | 0.644921 | 8.2:-1734354 | None:intergenic |
| ATTCGGCTAGCAACAACTGA+CGG | 0.655387 | 8.2:-1734173 | None:intergenic |
| TGGCTATGTTGCGTGAAGAA+CGG | 0.675675 | 8.2:-1732816 | None:intergenic |
| AGTCTCACTTCATCTGACAC+AGG | 0.679981 | 8.2:-1733946 | None:intergenic |
| CAGATGAAGTGAGACTTCAG+TGG | 0.693954 | 8.2:+1733953 | MS.gene68943:CDS |
| AGATTGATGAGTGCATTCTG+TGG | 0.715212 | 8.2:+1733854 | MS.gene68943:intron |
| ATGATATAATTGCAGCAGTG+TGG | 0.719749 | 8.2:+1732760 | MS.gene68943:intron |
| TGCAGGTAGTGAGTCCACAG+TGG | 0.754596 | 8.2:+1734340 | MS.gene68943:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTATTTGCATAACAA+GGG | + | chr8.2:1734259-1734278 | MS.gene68943:intron | 15.0% |
| !! | AGACTAATAAATAAATCAAA+TGG | - | chr8.2:1732711-1732730 | None:intergenic | 15.0% |
| !! | CTTTCTATTAATTAATTTCT+TGG | + | chr8.2:1732380-1732399 | MS.gene68943:intron | 15.0% |
| !! | TAGATAGATATAAAAACATA+AGG | - | chr8.2:1732330-1732349 | None:intergenic | 15.0% |
| !! | AGCAATATCATATTATATCA+TGG | + | chr8.2:1732416-1732435 | MS.gene68943:intron | 20.0% |
| !! | ATATAAAAACATAAGGAAGA+GGG | - | chr8.2:1732323-1732342 | None:intergenic | 20.0% |
| !! | GAAAATTTATTTGCATAACA+AGG | + | chr8.2:1734258-1734277 | MS.gene68943:intron | 20.0% |
| !! | TATAAGGAATGCATAAAAAT+GGG | - | chr8.2:1733074-1733093 | None:intergenic | 20.0% |
| !!! | AATTTCTTGGTTATTTTGAA+GGG | + | chr8.2:1732393-1732412 | MS.gene68943:intron | 20.0% |
| !!! | TAATTTCTTGGTTATTTTGA+AGG | + | chr8.2:1732392-1732411 | MS.gene68943:intron | 20.0% |
| !!! | TTTTCTTTTAGTGATTGATA+TGG | + | chr8.2:1732730-1732749 | MS.gene68943:intron | 20.0% |
| ! | AAACTCTATGTTTGAATTTG+TGG | + | chr8.2:1733186-1733205 | MS.gene68943:intron | 25.0% |
| ! | ATAAGGAATGCATAAAAATG+GGG | - | chr8.2:1733073-1733092 | None:intergenic | 25.0% |
| ! | ATGTTGAGTTATACAAGAAA+GGG | - | chr8.2:1733476-1733495 | None:intergenic | 25.0% |
| ! | CTAAGAAATATGTTACTACA+AGG | - | chr8.2:1732596-1732615 | None:intergenic | 25.0% |
| ! | CTAATTAGAGAGTTCAAATT+CGG | - | chr8.2:1733146-1733165 | None:intergenic | 25.0% |
| ! | CTATAAGGAATGCATAAAAA+TGG | - | chr8.2:1733075-1733094 | None:intergenic | 25.0% |
| ! | CTGGTTTAATTAAGTGTAAT+AGG | + | chr8.2:1733102-1733121 | MS.gene68943:intron | 25.0% |
| ! | GATATAAAAACATAAGGAAG+AGG | - | chr8.2:1732324-1732343 | None:intergenic | 25.0% |
| !! | AGCAAATGCATATTTTATGA+AGG | + | chr8.2:1733996-1734015 | MS.gene68943:CDS | 25.0% |
| !! | ATCTAAAATCATATCCAATG+AGG | + | chr8.2:1733724-1733743 | MS.gene68943:CDS | 25.0% |
| !! | ATTTTCAATTATGATGCTAG+AGG | - | chr8.2:1732913-1732932 | None:intergenic | 25.0% |
| !! | GATTTACGTTTTTCATTTTC+AGG | + | chr8.2:1733565-1733584 | MS.gene68943:intron | 25.0% |
| !! | GCAAATGCATATTTTATGAA+GGG | + | chr8.2:1733997-1734016 | MS.gene68943:CDS | 25.0% |
| !! | TTTAGTGATTGATATGGTTT+TGG | + | chr8.2:1732736-1732755 | MS.gene68943:intron | 25.0% |
| AAACGTAAATCACCTCTTAT+TGG | - | chr8.2:1733556-1733575 | None:intergenic | 30.0% | |
| AAGTGTATAGACATATGGTT+TGG | - | chr8.2:1734288-1734307 | None:intergenic | 30.0% | |
| AATGTAAATTACTGACCTCA+AGG | - | chr8.2:1734217-1734236 | None:intergenic | 30.0% | |
| ACCTCTTATTGGAATATAGA+GGG | - | chr8.2:1733545-1733564 | None:intergenic | 30.0% | |
| ACGTTGTACGTTGTTATAAT+AGG | + | chr8.2:1733007-1733026 | MS.gene68943:intron | 30.0% | |
| AGATATCGAGTTACCTTATT+TGG | + | chr8.2:1733812-1733831 | MS.gene68943:intron | 30.0% | |
| ATGTAAATTACTGACCTCAA+GGG | - | chr8.2:1734216-1734235 | None:intergenic | 30.0% | |
| ATTAGAATCATAGACCTCAT+TGG | - | chr8.2:1733741-1733760 | None:intergenic | 30.0% | |
| ATTGAAGCAATGCAAAGTTA+CGG | + | chr8.2:1733683-1733702 | MS.gene68943:CDS | 30.0% | |
| CACAAAAAACATGCCAAATA+AGG | - | chr8.2:1733828-1733847 | None:intergenic | 30.0% | |
| CATGTTGAGTTATACAAGAA+AGG | - | chr8.2:1733477-1733496 | None:intergenic | 30.0% | |
| GATCTTGTTGAATCTTCAAA+TGG | + | chr8.2:1733237-1733256 | MS.gene68943:intron | 30.0% | |
| TAAACCAGCTCAAAACTATA+AGG | - | chr8.2:1733090-1733109 | None:intergenic | 30.0% | |
| TCTAATTGAAGAGTCTTTAC+AGG | - | chr8.2:1734122-1734141 | None:intergenic | 30.0% | |
| ! | GAACTCTCTAATTAGTTCTT+TGG | + | chr8.2:1733151-1733170 | MS.gene68943:intron | 30.0% |
| ! | GTTTGAATTTGTGGTGATTT+TGG | + | chr8.2:1733195-1733214 | MS.gene68943:intron | 30.0% |
| ! | TGCATATTTTATGAAGGGAA+TGG | + | chr8.2:1734002-1734021 | MS.gene68943:CDS | 30.0% |
| !!! | TTCATGTTCTTTTTTCCACT+AGG | + | chr8.2:1734049-1734068 | MS.gene68943:intron | 30.0% |
| AAGATGAGTCTTGGTATAGA+TGG | - | chr8.2:1732487-1732506 | None:intergenic | 35.0% | |
| AATAGCTCTTGGAGCATAAA+CGG | - | chr8.2:1732456-1732475 | None:intergenic | 35.0% | |
| ATGATATAATTGCAGCAGTG+TGG | + | chr8.2:1732760-1732779 | MS.gene68943:intron | 35.0% | |
| ATTCCTATATCTCCTGAACA+AGG | - | chr8.2:1732845-1732864 | None:intergenic | 35.0% | |
| CACCTCTTATTGGAATATAG+AGG | - | chr8.2:1733546-1733565 | None:intergenic | 35.0% | |
| CCAAAGTAGATGAAGAATTG+AGG | - | chr8.2:1732687-1732706 | None:intergenic | 35.0% | |
| CCTCAATTCTTCATCTACTT+TGG | + | chr8.2:1732684-1732703 | MS.gene68943:intron | 35.0% | |
| CTAGCAAGTGTATAGACATA+TGG | - | chr8.2:1734293-1734312 | None:intergenic | 35.0% | |
| GACTCTTCAATTAGAGCAAA+CGG | + | chr8.2:1734127-1734146 | MS.gene68943:CDS | 35.0% | |
| GATGACCATCTAACAATAGT+CGG | - | chr8.2:1733919-1733938 | None:intergenic | 35.0% | |
| GGTTACTATGTGTTTACTGA+AGG | + | chr8.2:1734093-1734112 | MS.gene68943:intron | 35.0% | |
| GTTTACATTGACAGTGAATG+TGG | - | chr8.2:1733298-1733317 | None:intergenic | 35.0% | |
| TAGTTCTTTGGCAAAGCAAT+AGG | + | chr8.2:1733163-1733182 | MS.gene68943:intron | 35.0% | |
| TATAGGAATTTCACTGATCG+TGG | + | chr8.2:1732856-1732875 | MS.gene68943:CDS | 35.0% | |
| TCAGTAAACACATAGTAACC+AGG | - | chr8.2:1734093-1734112 | None:intergenic | 35.0% | |
| TCCCTCTATATTCCAATAAG+AGG | + | chr8.2:1733541-1733560 | MS.gene68943:intron | 35.0% | |
| TTACTACAAGGACTTCCATA+AGG | - | chr8.2:1732584-1732603 | None:intergenic | 35.0% | |
| TTCTTAGTTCATCCTTCTCT+TGG | + | chr8.2:1732609-1732628 | MS.gene68943:intron | 35.0% | |
| ! | AACTTTTGCGAAAATCACGT+TGG | + | chr8.2:1733261-1733280 | MS.gene68943:intron | 35.0% |
| ! | ATTTTATGAAGGGAATGGCT+TGG | + | chr8.2:1734007-1734026 | MS.gene68943:CDS | 35.0% |
| ! | CTTTTCACAATTCCAAGAGA+AGG | - | chr8.2:1732624-1732643 | None:intergenic | 35.0% |
| ! | TGGAAGTTTAGAATAGCTCT+TGG | - | chr8.2:1732467-1732486 | None:intergenic | 35.0% |
| !!! | ATGTTCTTTTTTCCACTAGG+TGG | + | chr8.2:1734052-1734071 | MS.gene68943:intron | 35.0% |
| !!! | CATTCCTTATAGTTTTGAGC+TGG | + | chr8.2:1733083-1733102 | MS.gene68943:intron | 35.0% |
| !!! | TGTTCTTTTTTCCACTAGGT+GGG | + | chr8.2:1734053-1734072 | MS.gene68943:intron | 35.0% |
| AAACTTGAATTCGCTGTTGC+AGG | + | chr8.2:1734323-1734342 | MS.gene68943:intron | 40.0% | |
| AAGAGGGATATACCTGTTTG+AGG | - | chr8.2:1732307-1732326 | None:intergenic | 40.0% | |
| AAGCAATGCAAAGTTACGGT+GGG | + | chr8.2:1733687-1733706 | MS.gene68943:CDS | 40.0% | |
| AATTATGATGCTAGAGGCAG+TGG | - | chr8.2:1732907-1732926 | None:intergenic | 40.0% | |
| AGAGGGATATACCTGTTTGA+GGG | - | chr8.2:1732306-1732325 | None:intergenic | 40.0% | |
| AGATTGATGAGTGCATTCTG+TGG | + | chr8.2:1733854-1733873 | MS.gene68943:intron | 40.0% | |
| AGCATGCATGCTTAATTACC+AGG | - | chr8.2:1732658-1732677 | None:intergenic | 40.0% | |
| ATATCTCCTGAACAAGGTGA+TGG | - | chr8.2:1732839-1732858 | None:intergenic | 40.0% | |
| CAAGGACTTCCATAAGGTTT+AGG | - | chr8.2:1732578-1732597 | None:intergenic | 40.0% | |
| CCATAAGGTTTAGGAAAAGC+AGG | - | chr8.2:1732569-1732588 | None:intergenic | 40.0% | |
| CGTACAACGTGTATATCAAC+TGG | - | chr8.2:1732997-1733016 | None:intergenic | 40.0% | |
| GAAAGAGCTTACTGACATGA+AGG | + | chr8.2:1733646-1733665 | MS.gene68943:CDS | 40.0% | |
| GGAAAGAACCAACTAGCAAA+AGG | - | chr8.2:1733524-1733543 | None:intergenic | 40.0% | |
| GGGTGAATGCATATGAACTT+GGG | + | chr8.2:1733603-1733622 | MS.gene68943:CDS | 40.0% | |
| TCACCTTGTTCAGGAGATAT+AGG | + | chr8.2:1732839-1732858 | MS.gene68943:CDS | 40.0% | |
| TGCTGAAGACTAATCGCATT+CGG | - | chr8.2:1734193-1734212 | None:intergenic | 40.0% | |
| TGGGTGAATTGTTCTTTACC+TGG | + | chr8.2:1734072-1734091 | MS.gene68943:intron | 40.0% | |
| ! | CCAACTAGCAAAAGGTGTAA+AGG | - | chr8.2:1733516-1733535 | None:intergenic | 40.0% |
| ! | CCTTTACACCTTTTGCTAGT+TGG | + | chr8.2:1733513-1733532 | MS.gene68943:intron | 40.0% |
| !! | CCTGCTTTTCCTAAACCTTA+TGG | + | chr8.2:1732566-1732585 | MS.gene68943:intron | 40.0% |
| AATTTCACTGATCGTGGTGG+AGG | + | chr8.2:1732862-1732881 | MS.gene68943:CDS | 45.0% | |
| ACATAGCCATCACCTTGTTC+AGG | + | chr8.2:1732830-1732849 | MS.gene68943:CDS | 45.0% | |
| ACCATCTAACAATAGTCGGC+GGG | - | chr8.2:1733915-1733934 | None:intergenic | 45.0% | |
| AGAACAATTCACCCACCTAG+TGG | - | chr8.2:1734067-1734086 | None:intergenic | 45.0% | |
| AGGAATTTCACTGATCGTGG+TGG | + | chr8.2:1732859-1732878 | MS.gene68943:CDS | 45.0% | |
| AGTCTCACTTCATCTGACAC+AGG | - | chr8.2:1733949-1733968 | None:intergenic | 45.0% | |
| ATTAGAGCAAACGGCAGTGA+TGG | + | chr8.2:1734136-1734155 | MS.gene68943:CDS | 45.0% | |
| ATTCGGCTAGCAACAACTGA+CGG | - | chr8.2:1734176-1734195 | None:intergenic | 45.0% | |
| CAACAAGATCACAGTGTCGT+TGG | - | chr8.2:1733227-1733246 | None:intergenic | 45.0% | |
| CAGATGAAGTGAGACTTCAG+TGG | + | chr8.2:1733953-1733972 | MS.gene68943:CDS | 45.0% | |
| CTTACTGACATGAAGGACTC+TGG | + | chr8.2:1733653-1733672 | MS.gene68943:CDS | 45.0% | |
| GAAGCAATGCAAAGTTACGG+TGG | + | chr8.2:1733686-1733705 | MS.gene68943:CDS | 45.0% | |
| GAAGTGAGACTTCAGTGGAA+AGG | + | chr8.2:1733958-1733977 | MS.gene68943:CDS | 45.0% | |
| GACCATCTAACAATAGTCGG+CGG | - | chr8.2:1733916-1733935 | None:intergenic | 45.0% | |
| GGGGTGAATGCATATGAACT+TGG | + | chr8.2:1733602-1733621 | MS.gene68943:CDS | 45.0% | |
| GTTGCGTTGAAGATGAGTCT+TGG | - | chr8.2:1732496-1732515 | None:intergenic | 45.0% | |
| TGAAAAGCGACACAAATGCC+TGG | + | chr8.2:1732637-1732656 | MS.gene68943:intron | 45.0% | |
| TGGCTATGTTGCGTGAAGAA+CGG | - | chr8.2:1732819-1732838 | None:intergenic | 45.0% | |
| TTAGAGCAAACGGCAGTGAT+GGG | + | chr8.2:1734137-1734156 | MS.gene68943:CDS | 45.0% | |
| TTCAGGAGTTCATCACTGCT+GGG | + | chr8.2:1733582-1733601 | MS.gene68943:intron | 45.0% | |
| TTTCAGGAGTTCATCACTGC+TGG | + | chr8.2:1733581-1733600 | MS.gene68943:intron | 45.0% | |
| ! | ACGCGCACAAGGATTTTATG+TGG | - | chr8.2:1733365-1733384 | None:intergenic | 45.0% |
| !! | ATTAGTCTTCAGCACCCTTG+AGG | + | chr8.2:1734199-1734218 | MS.gene68943:CDS | 45.0% |
| ACAGAAGAAGAACGCGCACA+AGG | - | chr8.2:1733376-1733395 | None:intergenic | 50.0% | |
| CATCTAACAATAGTCGGCGG+GGG | - | chr8.2:1733913-1733932 | None:intergenic | 50.0% | |
| CCATCTAACAATAGTCGGCG+GGG | - | chr8.2:1733914-1733933 | None:intergenic | 50.0% | |
| TCAGGAGTTCATCACTGCTG+GGG | + | chr8.2:1733583-1733602 | MS.gene68943:intron | 50.0% | |
| ! | GAACTTGGGTGCACTGATGA+GGG | + | chr8.2:1733617-1733636 | MS.gene68943:CDS | 50.0% |
| ! | GGTGCACTGATGAGGGATTA+AGG | + | chr8.2:1733624-1733643 | MS.gene68943:CDS | 50.0% |
| ! | TGAACTTGGGTGCACTGATG+AGG | + | chr8.2:1733616-1733635 | MS.gene68943:CDS | 50.0% |
| TGCAGGTAGTGAGTCCACAG+TGG | + | chr8.2:1734340-1734359 | MS.gene68943:intron | 55.0% | |
| ! | CCCCGCCGACTATTGTTAGA+TGG | + | chr8.2:1733911-1733930 | MS.gene68943:CDS | 55.0% |
| ! | CGGCGGGGGTGTACACAAGA+TGG | - | chr8.2:1733899-1733918 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 1732296 | 1734374 | 1732296 | ID=MS.gene68943 |
| chr8.2 | mRNA | 1732296 | 1734374 | 1732296 | ID=MS.gene68943.t1;Parent=MS.gene68943 |
| chr8.2 | exon | 1732296 | 1732313 | 1732296 | ID=MS.gene68943.t1.exon1;Parent=MS.gene68943.t1 |
| chr8.2 | CDS | 1732296 | 1732313 | 1732296 | ID=cds.MS.gene68943.t1;Parent=MS.gene68943.t1 |
| chr8.2 | exon | 1732775 | 1732897 | 1732775 | ID=MS.gene68943.t1.exon2;Parent=MS.gene68943.t1 |
| chr8.2 | CDS | 1732775 | 1732897 | 1732775 | ID=cds.MS.gene68943.t1;Parent=MS.gene68943.t1 |
| chr8.2 | exon | 1733587 | 1733745 | 1733587 | ID=MS.gene68943.t1.exon3;Parent=MS.gene68943.t1 |
| chr8.2 | CDS | 1733587 | 1733745 | 1733587 | ID=cds.MS.gene68943.t1;Parent=MS.gene68943.t1 |
| chr8.2 | exon | 1733856 | 1734028 | 1733856 | ID=MS.gene68943.t1.exon4;Parent=MS.gene68943.t1 |
| chr8.2 | CDS | 1733856 | 1734028 | 1733856 | ID=cds.MS.gene68943.t1;Parent=MS.gene68943.t1 |
| chr8.2 | exon | 1734115 | 1734220 | 1734115 | ID=MS.gene68943.t1.exon5;Parent=MS.gene68943.t1 |
| chr8.2 | CDS | 1734115 | 1734220 | 1734115 | ID=cds.MS.gene68943.t1;Parent=MS.gene68943.t1 |
| chr8.2 | exon | 1734345 | 1734374 | 1734345 | ID=MS.gene68943.t1.exon6;Parent=MS.gene68943.t1 |
| chr8.2 | CDS | 1734345 | 1734374 | 1734345 | ID=cds.MS.gene68943.t1;Parent=MS.gene68943.t1 |
| Gene Sequence |
| Protein sequence |
