AlfalfaGEDB | MS.gene72186

M. sativa cultivar XinJiangDaYe / MS.gene72186

KEGG: -
GO: -
PFAM: PF00314.20

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72186.t1	RHN43304.1	96	176	7	0	1	176	43	218	1.40E-94	355.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72186.t1	P25096	50.5	202	53	2	22	176	1	202	6.0e-54	211.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72186.t1	A0A072TVX9	96.0	176	7	0	1	176	1	176	1.0e-94	355.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049217	MS.gene72186	-0.823507	1.33E-53	-1.69E-46
MS.gene050353	MS.gene72186	0.816181	6.31E-52	-1.69E-46
MS.gene050354	MS.gene72186	0.80344	3.48E-49	-1.69E-46
MS.gene050380	MS.gene72186	0.819179	1.33E-52	-1.69E-46
MS.gene050381	MS.gene72186	0.824663	7.14E-54	-1.69E-46
MS.gene050871	MS.gene72186	-0.801335	9.45E-49	-1.69E-46
MS.gene051113	MS.gene72186	0.80335	3.64E-49	-1.69E-46
MS.gene051167	MS.gene72186	0.810065	1.39E-50	-1.69E-46
MS.gene05141	MS.gene72186	0.856051	4.18E-62	-1.69E-46
MS.gene051946	MS.gene72186	0.8015	8.74E-49	-1.69E-46
MS.gene052164	MS.gene72186	-0.811474	6.87E-51	-1.69E-46
MS.gene054003	MS.gene72186	-0.831499	1.61E-55	-1.69E-46
MS.gene054595	MS.gene72186	-0.825837	3.77E-54	-1.69E-46
MS.gene054708	MS.gene72186	0.800646	1.31E-48	-1.69E-46
MS.gene057173	MS.gene72186	0.832821	7.60E-56	-1.69E-46
MS.gene058157	MS.gene72186	-0.809432	1.90E-50	-1.69E-46
MS.gene058183	MS.gene72186	-0.81331	2.73E-51	-1.69E-46
MS.gene058840	MS.gene72186	0.801743	7.80E-49	-1.69E-46
MS.gene060482	MS.gene72186	-0.812756	3.61E-51	-1.69E-46
MS.gene06074	MS.gene72186	0.815213	1.04E-51	-1.69E-46
MS.gene061226	MS.gene72186	0.822396	2.42E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72186.t1	MTR_8g096910	96.023	176	7	0	1	176	1	176	2.33e-124	347
MS.gene72186.t1	MTR_8g096920	80.114	176	32	1	1	176	1	173	1.11e-101	290
MS.gene72186.t1	MTR_8g096900	45.946	222	72	3	2	176	28	248	1.58e-62	193
MS.gene72186.t1	MTR_5g010635	47.087	206	60	3	19	176	21	225	1.65e-53	170
MS.gene72186.t1	MTR_5g010640	47.531	162	78	3	1	156	1	161	1.26e-46	152
MS.gene72186.t1	MTR_2g067990	38.693	199	77	6	21	176	26	222	2.45e-33	125
MS.gene72186.t1	MTR_8g075510	33.190	232	92	9	6	176	15	244	7.77e-29	107
MS.gene72186.t1	MTR_5g022350	33.333	234	92	11	3	176	14	243	2.87e-28	107
MS.gene72186.t1	MTR_8g075510	45.038	131	64	6	6	130	15	143	4.14e-28	106
MS.gene72186.t1	MTR_5g022350	44.615	130	62	7	6	129	82	207	4.21e-28	104
MS.gene72186.t1	MTR_5g059200	39.665	179	89	7	1	164	1	175	6.31e-28	105
MS.gene72186.t1	MTR_8g037890	42.857	140	64	6	1	130	9	142	1.03e-27	105
MS.gene72186.t1	MTR_8g075550	41.818	165	75	7	20	164	26	189	4.97e-27	103
MS.gene72186.t1	MTR_7g062610	37.778	180	97	8	1	166	1	179	7.68e-27	102
MS.gene72186.t1	MTR_1g025420	43.478	138	66	6	1	129	4	138	8.46e-27	102
MS.gene72186.t1	MTR_1g025420	43.478	138	66	6	1	129	4	138	1.79e-26	102
MS.gene72186.t1	MTR_4g073730	42.029	138	67	6	3	129	5	140	2.60e-26	101
MS.gene72186.t1	MTR_4g073730	42.029	138	67	6	3	129	5	140	2.64e-26	102
MS.gene72186.t1	MTR_1g021945	47.059	119	53	3	20	129	24	141	5.69e-26	99.8
MS.gene72186.t1	MTR_4g073720	44.928	138	65	6	1	129	4	139	1.08e-25	100
MS.gene72186.t1	MTR_6g079580	40.714	140	71	6	1	132	2	137	1.12e-25	99.0
MS.gene72186.t1	MTR_5g022310	42.754	138	65	5	3	129	7	141	1.16e-25	99.4
MS.gene72186.t1	MTR_8g107140	44.348	115	53	4	26	132	31	142	1.27e-25	99.0
MS.gene72186.t1	MTR_5g022310	42.754	138	65	5	3	129	7	141	1.85e-25	99.8
MS.gene72186.t1	MTR_3g068015	40.506	158	79	9	23	166	29	185	2.91e-25	98.2
MS.gene72186.t1	MTR_3g114030	45.217	115	53	4	24	129	9	122	7.87e-25	96.7
MS.gene72186.t1	MTR_8g056820	41.007	139	66	5	1	129	9	141	9.27e-25	97.1
MS.gene72186.t1	MTR_8g036215	38.235	170	87	9	1	157	1	165	1.17e-24	96.3
MS.gene72186.t1	MTR_2g067980	33.480	227	78	10	21	176	23	247	1.31e-24	100
MS.gene72186.t1	MTR_3g111620	42.857	119	59	3	24	134	29	146	3.67e-24	95.1
MS.gene72186.t1	MTR_7g102380	31.250	240	95	9	5	176	4	241	3.90e-23	92.4
MS.gene72186.t1	MTR_2g069660	30.328	244	101	8	1	176	1	243	5.08e-23	92.0
MS.gene72186.t1	MTR_2g068655	30.973	226	85	10	20	176	29	252	1.93e-22	91.7
MS.gene72186.t1	MTR_1g062350	33.333	186	103	8	1	175	1	176	3.67e-22	89.7
MS.gene72186.t1	MTR_4g063630	39.062	128	68	4	11	129	18	144	1.06e-21	88.6
MS.gene72186.t1	MTR_1g062370	35.220	159	88	6	1	150	1	153	1.45e-21	88.2
MS.gene72186.t1	MTR_6g009480	38.686	137	73	5	3	129	10	145	5.31e-21	87.4
MS.gene72186.t1	MTR_1g062340	38.129	139	75	5	1	130	1	137	5.62e-21	86.7
MS.gene72186.t1	MTR_1g062630	28.689	244	104	10	1	176	1	242	2.28e-20	85.5
MS.gene72186.t1	MTR_1g062660	34.591	159	89	6	1	150	1	153	3.33e-20	84.7
MS.gene72186.t1	MTR_1g062590	32.075	159	93	6	1	150	1	153	3.63e-19	81.6
MS.gene72186.t1	MTR_2g068030	39.669	121	61	5	21	130	22	141	2.02e-18	80.1
MS.gene72186.t1	MTR_5g023850	31.937	191	90	9	24	176	28	216	3.18e-18	79.0
MS.gene72186.t1	MTR_1g062690	29.189	185	88	8	1	175	1	152	6.06e-14	67.4
MS.gene72186.t1	MTR_2g067970	38.710	93	52	5	61	150	5	95	6.31e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72186.t1	AT4G11650	47.556	225	67	5	1	176	1	223	8.57e-60	186
MS.gene72186.t1	AT1G77700	42.012	169	86	5	4	164	43	207	1.95e-35	126
MS.gene72186.t1	AT1G77700	49.231	130	58	3	4	129	43	168	2.03e-35	126
MS.gene72186.t1	AT1G77700	50.862	116	49	3	18	129	85	196	2.24e-33	121
MS.gene72186.t1	AT1G75050	46.667	135	63	3	2	129	5	137	4.74e-31	113
MS.gene72186.t1	AT1G75030	42.647	136	69	4	1	129	4	137	1.20e-28	106
MS.gene72186.t1	AT4G36010	51.724	116	45	5	24	129	25	139	3.45e-27	104
MS.gene72186.t1	AT4G36010	51.724	116	45	5	24	129	25	139	3.45e-27	104
MS.gene72186.t1	AT4G38660	43.182	132	64	5	7	129	15	144	4.97e-27	104
MS.gene72186.t1	AT1G75800	43.165	139	68	6	1	129	1	138	6.55e-27	103
MS.gene72186.t1	AT1G75040	40.113	177	91	7	1	166	4	176	1.48e-26	101
MS.gene72186.t1	AT5G02140	37.143	175	91	7	6	166	9	178	2.73e-26	100
MS.gene72186.t1	AT5G02140	37.143	175	91	7	6	166	9	178	2.74e-26	101
MS.gene72186.t1	AT4G38660	44.715	123	57	5	16	129	2	122	5.70e-26	101
MS.gene72186.t1	AT2G17860	43.972	141	65	7	1	129	1	139	8.77e-26	99.8
MS.gene72186.t1	AT1G18250	45.000	120	55	4	18	129	18	134	2.23e-25	98.2
MS.gene72186.t1	AT1G73620	45.299	117	53	4	21	129	41	154	2.28e-25	98.6
MS.gene72186.t1	AT1G18250	46.154	117	52	4	21	129	20	133	3.67e-25	97.8
MS.gene72186.t1	AT1G19320	40.580	138	70	6	6	132	10	146	3.09e-24	95.5
MS.gene72186.t1	AT5G38280	39.706	136	68	6	24	149	27	158	3.97e-24	98.6
MS.gene72186.t1	AT5G24620	38.235	136	74	4	3	129	6	140	4.55e-24	97.4
MS.gene72186.t1	AT4G38670	44.203	138	62	7	5	129	4	139	4.85e-24	95.5
MS.gene72186.t1	AT4G38670	44.203	138	62	7	5	129	4	139	4.85e-24	95.5
MS.gene72186.t1	AT5G38280	39.706	136	68	6	24	149	27	158	5.37e-24	98.2
MS.gene72186.t1	AT4G24180	39.437	142	70	6	3	129	14	154	5.66e-24	95.1
MS.gene72186.t1	AT5G24620	38.235	136	74	4	3	129	61	195	6.21e-24	97.4
MS.gene72186.t1	AT5G24620	38.235	136	74	4	3	129	82	216	6.25e-24	97.8
MS.gene72186.t1	AT4G24180	39.437	142	70	6	3	129	14	154	1.01e-23	95.1
MS.gene72186.t1	AT4G24180	39.437	142	70	6	3	129	14	154	1.23e-23	95.1
MS.gene72186.t1	AT5G40020	32.370	173	93	7	6	158	8	176	7.29e-23	92.0
MS.gene72186.t1	AT1G20030	43.478	115	55	4	24	129	5	118	7.40e-23	92.8
MS.gene72186.t1	AT1G20030	43.478	115	55	4	24	129	22	135	1.02e-22	92.8
MS.gene72186.t1	AT4G24180	37.063	143	74	6	2	129	8	149	4.45e-22	89.7
MS.gene72186.t1	AT4G38670	43.200	125	58	6	16	129	1	123	5.50e-22	89.7
MS.gene72186.t1	AT4G24180	37.063	143	74	6	2	129	8	149	6.82e-22	90.5
MS.gene72186.t1	AT4G24180	37.063	143	74	6	2	129	8	149	9.03e-22	90.1
MS.gene72186.t1	AT2G28790	33.758	157	92	5	1	146	31	186	2.31e-20	85.5
MS.gene72186.t1	AT2G28790	33.758	157	92	5	1	146	6	161	2.38e-20	85.1
MS.gene72186.t1	AT1G70250	34.815	135	78	6	24	150	147	279	6.22e-16	75.1

Find 67 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAACCTCAGCTGCCCGAATT+TGG	0.169399	4.2:+6966257	MS.gene72186:CDS
AATATTATTATTGCCTATAT+TGG	0.201835	4.2:+6966093	MS.gene72186:CDS
ACTTAACGGTGGAAACAATT+TGG	0.203853	4.2:+6966399	MS.gene72186:CDS
AACCTCAGCTGCCCGAATTT+GGG	0.246234	4.2:+6966258	MS.gene72186:CDS
CAATTTAGTTCAACTTCTAA+TGG	0.270728	4.2:+6966466	MS.gene72186:CDS
AACCGGTTCGGCCCCAAATT+CGG	0.298991	4.2:-6966270	None:intergenic
ACCGGTTCGGCCCCAAATTC+GGG	0.325390	4.2:-6966269	None:intergenic
AGGTTCCTGCTGGGACGTCT+AGG	0.373429	4.2:-6966240	None:intergenic
GGTTGCAGATTTGACGGTTC+AGG	0.391606	4.2:+6966289	MS.gene72186:CDS
ATTGATATATCCGTGATTGA+TGG	0.392044	4.2:+6966427	MS.gene72186:CDS
CGGGCAGCTGAGGTTCCTGC+TGG	0.395365	4.2:-6966250	None:intergenic
TGGCGGTCGGCAGTTGAACT+CGG	0.398070	4.2:+6966204	MS.gene72186:CDS
CAACTGCCGACCGCCACCCC+TGG	0.416174	4.2:-6966197	None:intergenic
GGACGTCTAGGGCCCATGTT+TGG	0.422664	4.2:-6966228	None:intergenic
GCCCTCAGTTGCAGCGTATC+CGG	0.424143	4.2:+6966346	MS.gene72186:CDS
GCCCGAATTTGGGGCCGAAC+CGG	0.425383	4.2:+6966268	MS.gene72186:CDS
TGTGGCCAGCAGGCATTCCC+AGG	0.432973	4.2:+6966179	MS.gene72186:CDS
ATTAAACAGAGAGCCAATAT+AGG	0.437364	4.2:-6966106	None:intergenic
CTTGCAGAATACACACTTAA+CGG	0.444433	4.2:+6966385	MS.gene72186:CDS
GAAGTTGAACTAAATTGCAT+TGG	0.446469	4.2:-6966460	None:intergenic
TTGGGTTGATGATAAGCGTC+AGG	0.449898	4.2:-6966526	None:intergenic
CCACCCCTGGGAATGCCTGC+TGG	0.453658	4.2:-6966184	None:intergenic
TCCTACACCGTGTGGCCAGC+AGG	0.465020	4.2:+6966169	MS.gene72186:CDS
GCAAAAGACAATTCTATAGT+TGG	0.465056	4.2:-6966581	None:intergenic
AGTTGAACTCGGGCCAAACA+TGG	0.469395	4.2:+6966215	MS.gene72186:CDS
GGTTCCTGCTGGGACGTCTA+GGG	0.477500	4.2:-6966239	None:intergenic
AACTGCCGACCGCCACCCCT+GGG	0.478248	4.2:-6966196	None:intergenic
GGCCGTGGTAGTTGTCAAAC+CGG	0.480258	4.2:+6966310	MS.gene72186:CDS
ATTCTATAGTTGGTACCAGC+AGG	0.484718	4.2:-6966571	None:intergenic
TACCGGATACGCTGCAACTG+AGG	0.493865	4.2:-6966348	None:intergenic
CGAACCGGTTGCAGATTTGA+CGG	0.499446	4.2:+6966283	MS.gene72186:CDS
CGTCAAATCTGCAACCGGTT+CGG	0.501459	4.2:-6966282	None:intergenic
GCATTCCCAGGGGTGGCGGT+CGG	0.503845	4.2:+6966191	MS.gene72186:CDS
AAGTGTGGTCGGAGGTCTAC+CGG	0.507917	4.2:-6966365	None:intergenic
GCAGGCATTCCCAGGGGTGG+CGG	0.509045	4.2:+6966187	MS.gene72186:CDS
ACCTCAGCTGCCCGAATTTG+GGG	0.517805	4.2:+6966259	MS.gene72186:CDS
GCCCCAAATTCGGGCAGCTG+AGG	0.519010	4.2:-6966260	None:intergenic
TGAACCGTCAAATCTGCAAC+CGG	0.519233	4.2:-6966287	None:intergenic
GTGGCCAGCAGGCATTCCCA+GGG	0.520424	4.2:+6966180	MS.gene72186:CDS
GGCGGTCGGCAGTTGAACTC+GGG	0.524309	4.2:+6966205	MS.gene72186:CDS
AGATTTGACGGTTCAGGCCG+TGG	0.534325	4.2:+6966295	MS.gene72186:CDS
GCAACAAAGTACTAACCTGC+AGG	0.535215	4.2:+6966491	MS.gene72186:CDS
CCAGCAGGCATTCCCAGGGG+TGG	0.535691	4.2:+6966184	MS.gene72186:CDS
GAGGGCTCCACCGCAATCAC+CGG	0.545217	4.2:-6966329	None:intergenic
GCCACACGGTGTAGGAGCAT+CGG	0.549741	4.2:-6966162	None:intergenic
GGGCAGCTGAGGTTCCTGCT+GGG	0.554803	4.2:-6966249	None:intergenic
GGGAATGCCTGCTGGCCACA+CGG	0.556106	4.2:-6966176	None:intergenic
AAAACTGTTACATGCCCTGC+TGG	0.561280	4.2:+6966556	MS.gene72186:CDS
ACCGGATACGCTGCAACTGA+GGG	0.582645	4.2:-6966347	None:intergenic
GTTGAACTCGGGCCAAACAT+GGG	0.584315	4.2:+6966216	MS.gene72186:CDS
GCCTGCTGGCCACACGGTGT+AGG	0.587001	4.2:-6966170	None:intergenic
AGGGCAATTAGAATCCCTGC+AGG	0.610979	4.2:-6966506	None:intergenic
TGTCAAACCGGTGATTGCGG+TGG	0.620211	4.2:+6966322	MS.gene72186:CDS
GTGTATTCTGCAAGTGTGGT+CGG	0.621122	4.2:-6966376	None:intergenic
TGGGCCCTAGACGTCCCAGC+AGG	0.625631	4.2:+6966235	MS.gene72186:CDS
AATGTTGAAACCATCAATCA+CGG	0.630462	4.2:-6966437	None:intergenic
TTCTATAGTTGGTACCAGCA+GGG	0.634139	4.2:-6966570	None:intergenic
TAATATCTACACAAGCAGCA+AGG	0.650241	4.2:+6966125	MS.gene72186:CDS
TGGGTTGATGATAAGCGTCA+GGG	0.653624	4.2:-6966525	None:intergenic
ACCGATGCTCCTACACCGTG+TGG	0.659283	4.2:+6966161	MS.gene72186:CDS
CAACAAAGTACTAACCTGCA+GGG	0.664924	4.2:+6966492	MS.gene72186:CDS
CACCGGTTTGACAACTACCA+CGG	0.669452	4.2:-6966312	None:intergenic
AGTTGTCAAACCGGTGATTG+CGG	0.672636	4.2:+6966319	MS.gene72186:CDS
AAGTGTGTATTCTGCAAGTG+TGG	0.680757	4.2:-6966380	None:intergenic
TGGCCAGCAGGCATTCCCAG+GGG	0.692813	4.2:+6966181	MS.gene72186:CDS
TATTCTGCAAGTGTGGTCGG+AGG	0.710918	4.2:-6966373	None:intergenic
GCAGAATACACACTTAACGG+TGG	0.731861	4.2:+6966388	MS.gene72186:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATATTATTATTGCCTATAT+TGG	+	chr4.2:6966093-6966112	MS.gene72186:CDS	15.0%
!!	CAATTTAGTTCAACTTCTAA+TGG	+	chr4.2:6966466-6966485	MS.gene72186:CDS	25.0%
!!!	GTAACAGTTTTAACATCATT+GGG	-	chr4.2:6966547-6966566	None:intergenic	25.0%
!!!	TGTAACAGTTTTAACATCAT+TGG	-	chr4.2:6966548-6966567	None:intergenic	25.0%
	AATGTTGAAACCATCAATCA+CGG	-	chr4.2:6966440-6966459	None:intergenic	30.0%
	ATTAAACAGAGAGCCAATAT+AGG	-	chr4.2:6966109-6966128	None:intergenic	30.0%
	ATTGATATATCCGTGATTGA+TGG	+	chr4.2:6966427-6966446	MS.gene72186:CDS	30.0%
	GAAGTTGAACTAAATTGCAT+TGG	-	chr4.2:6966463-6966482	None:intergenic	30.0%
	GCAAAAGACAATTCTATAGT+TGG	-	chr4.2:6966584-6966603	None:intergenic	30.0%
	ACTTAACGGTGGAAACAATT+TGG	+	chr4.2:6966399-6966418	MS.gene72186:CDS	35.0%
	CTTGCAGAATACACACTTAA+CGG	+	chr4.2:6966385-6966404	MS.gene72186:CDS	35.0%
	TAATATCTACACAAGCAGCA+AGG	+	chr4.2:6966125-6966144	MS.gene72186:CDS	35.0%
	AAGTGTGTATTCTGCAAGTG+TGG	-	chr4.2:6966383-6966402	None:intergenic	40.0%
!	ATTCTATAGTTGGTACCAGC+AGG	-	chr4.2:6966574-6966593	None:intergenic	40.0%
!	CAACAAAGTACTAACCTGCA+GGG	+	chr4.2:6966492-6966511	MS.gene72186:CDS	40.0%
!	TTCTATAGTTGGTACCAGCA+GGG	-	chr4.2:6966573-6966592	None:intergenic	40.0%
	AAAACTGTTACATGCCCTGC+TGG	+	chr4.2:6966556-6966575	MS.gene72186:CDS	45.0%
	AGTTGTCAAACCGGTGATTG+CGG	+	chr4.2:6966319-6966338	MS.gene72186:CDS	45.0%
	GCAGAATACACACTTAACGG+TGG	+	chr4.2:6966388-6966407	MS.gene72186:CDS	45.0%
	GTGTATTCTGCAAGTGTGGT+CGG	-	chr4.2:6966379-6966398	None:intergenic	45.0%
	TGAACCGTCAAATCTGCAAC+CGG	-	chr4.2:6966290-6966309	None:intergenic	45.0%
!	GCAACAAAGTACTAACCTGC+AGG	+	chr4.2:6966491-6966510	MS.gene72186:CDS	45.0%
!!	TGGGTTGATGATAAGCGTCA+GGG	-	chr4.2:6966528-6966547	None:intergenic	45.0%
!!	TTGGGTTGATGATAAGCGTC+AGG	-	chr4.2:6966529-6966548	None:intergenic	45.0%
	AACCTCAGCTGCCCGAATTT+GGG	+	chr4.2:6966258-6966277	MS.gene72186:CDS	50.0%
	AGGGCAATTAGAATCCCTGC+AGG	-	chr4.2:6966509-6966528	None:intergenic	50.0%
	AGTTGAACTCGGGCCAAACA+TGG	+	chr4.2:6966215-6966234	MS.gene72186:CDS	50.0%
	CGAACCGGTTGCAGATTTGA+CGG	+	chr4.2:6966283-6966302	MS.gene72186:CDS	50.0%
	CGTCAAATCTGCAACCGGTT+CGG	-	chr4.2:6966285-6966304	None:intergenic	50.0%
	GGTTGCAGATTTGACGGTTC+AGG	+	chr4.2:6966289-6966308	MS.gene72186:CDS	50.0%
	GTTGAACTCGGGCCAAACAT+GGG	+	chr4.2:6966216-6966235	MS.gene72186:CDS	50.0%
	TATTCTGCAAGTGTGGTCGG+AGG	-	chr4.2:6966376-6966395	None:intergenic	50.0%
!!	CACCGGTTTGACAACTACCA+CGG	-	chr4.2:6966315-6966334	None:intergenic	50.0%
	AAGTGTGGTCGGAGGTCTAC+CGG	-	chr4.2:6966368-6966387	None:intergenic	55.0%
	ACCGGATACGCTGCAACTGA+GGG	-	chr4.2:6966350-6966369	None:intergenic	55.0%
	ACCTCAGCTGCCCGAATTTG+GGG	+	chr4.2:6966259-6966278	MS.gene72186:CDS	55.0%
	AGATTTGACGGTTCAGGCCG+TGG	+	chr4.2:6966295-6966314	MS.gene72186:CDS	55.0%
	GAACCTCAGCTGCCCGAATT+TGG	+	chr4.2:6966257-6966276	MS.gene72186:CDS	55.0%
	GGCCGTGGTAGTTGTCAAAC+CGG	+	chr4.2:6966310-6966329	MS.gene72186:CDS	55.0%
	TACCGGATACGCTGCAACTG+AGG	-	chr4.2:6966351-6966370	None:intergenic	55.0%
	TGTCAAACCGGTGATTGCGG+TGG	+	chr4.2:6966322-6966341	MS.gene72186:CDS	55.0%
!!	AACCGGTTCGGCCCCAAATT+CGG	-	chr4.2:6966273-6966292	None:intergenic	55.0%
	ACCGATGCTCCTACACCGTG+TGG	+	chr4.2:6966161-6966180	MS.gene72186:CDS	60.0%
	AGGTTCCTGCTGGGACGTCT+AGG	-	chr4.2:6966243-6966262	None:intergenic	60.0%
	GCCCTCAGTTGCAGCGTATC+CGG	+	chr4.2:6966346-6966365	MS.gene72186:CDS	60.0%
	GGTTCCTGCTGGGACGTCTA+GGG	-	chr4.2:6966242-6966261	None:intergenic	60.0%
	TGGCGGTCGGCAGTTGAACT+CGG	+	chr4.2:6966204-6966223	MS.gene72186:CDS	60.0%
!	GCCACACGGTGTAGGAGCAT+CGG	-	chr4.2:6966165-6966184	None:intergenic	60.0%
!	GGACGTCTAGGGCCCATGTT+TGG	-	chr4.2:6966231-6966250	None:intergenic	60.0%
!!	ACCGGTTCGGCCCCAAATTC+GGG	-	chr4.2:6966272-6966291	None:intergenic	60.0%
	GAGGGCTCCACCGCAATCAC+CGG	-	chr4.2:6966332-6966351	None:intergenic	65.0%
	GCCCCAAATTCGGGCAGCTG+AGG	-	chr4.2:6966263-6966282	None:intergenic	65.0%
	GGCGGTCGGCAGTTGAACTC+GGG	+	chr4.2:6966205-6966224	MS.gene72186:CDS	65.0%
	GGGAATGCCTGCTGGCCACA+CGG	-	chr4.2:6966179-6966198	None:intergenic	65.0%
	GGGCAGCTGAGGTTCCTGCT+GGG	-	chr4.2:6966252-6966271	None:intergenic	65.0%
	GTGGCCAGCAGGCATTCCCA+GGG	+	chr4.2:6966180-6966199	MS.gene72186:CDS	65.0%
	TCCTACACCGTGTGGCCAGC+AGG	+	chr4.2:6966169-6966188	MS.gene72186:CDS	65.0%
	TGGCCAGCAGGCATTCCCAG+GGG	+	chr4.2:6966181-6966200	MS.gene72186:CDS	65.0%
	TGTGGCCAGCAGGCATTCCC+AGG	+	chr4.2:6966179-6966198	MS.gene72186:CDS	65.0%
!	GCCCGAATTTGGGGCCGAAC+CGG	+	chr4.2:6966268-6966287	MS.gene72186:CDS	65.0%
	AACTGCCGACCGCCACCCCT+GGG	-	chr4.2:6966199-6966218	None:intergenic	70.0%
	CCACCCCTGGGAATGCCTGC+TGG	-	chr4.2:6966187-6966206	None:intergenic	70.0%
	CCAGCAGGCATTCCCAGGGG+TGG	+	chr4.2:6966184-6966203	MS.gene72186:CDS	70.0%
	CGGGCAGCTGAGGTTCCTGC+TGG	-	chr4.2:6966253-6966272	None:intergenic	70.0%
	GCAGGCATTCCCAGGGGTGG+CGG	+	chr4.2:6966187-6966206	MS.gene72186:CDS	70.0%
	GCCTGCTGGCCACACGGTGT+AGG	-	chr4.2:6966173-6966192	None:intergenic	70.0%
	TGGGCCCTAGACGTCCCAGC+AGG	+	chr4.2:6966235-6966254	MS.gene72186:CDS	70.0%
!	GCATTCCCAGGGGTGGCGGT+CGG	+	chr4.2:6966191-6966210	MS.gene72186:CDS	70.0%
	CAACTGCCGACCGCCACCCC+TGG	-	chr4.2:6966200-6966219	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	6966079	6966609	6966079	ID=MS.gene72186
chr4.2	mRNA	6966079	6966609	6966079	ID=MS.gene72186.t1;Parent=MS.gene72186
chr4.2	exon	6966079	6966609	6966079	ID=MS.gene72186.t1.exon1;Parent=MS.gene72186.t1
chr4.2	CDS	6966079	6966609	6966079	ID=cds.MS.gene72186.t1;Parent=MS.gene72186.t1

Gene Sequence

>MS.gene72186

ATGTCTCTCATAAAAATATTATTATTGCCTATATTGGCTCTCTGTTTAATATCTACACAAGCAGCAAGGTTCGACATAGTAAACCGATGCTCCTACACCGTGTGGCCAGCAGGCATTCCCAGGGGTGGCGGTCGGCAGTTGAACTCGGGCCAAACATGGGCCCTAGACGTCCCAGCAGGAACCTCAGCTGCCCGAATTTGGGGCCGAACCGGTTGCAGATTTGACGGTTCAGGCCGTGGTAGTTGTCAAACCGGTGATTGCGGTGGAGCCCTCAGTTGCAGCGTATCCGGTAGACCTCCGACCACACTTGCAGAATACACACTTAACGGTGGAAACAATTTGGATTACATTGATATATCCGTGATTGATGGTTTCAACATTCCAATGCAATTTAGTTCAACTTCTAATGGATGCAACAAAGTACTAACCTGCAGGGATTCTAATTGCCCTGACGCTTATCATCAACCCAATGATGTTAAAACTGTTACATGCCCTGCTGGTACCAACTATAGAATTGTCTTTTGCCCTTGA

Protein sequence

>MS.gene72186.t1

MSLIKILLLPILALCLISTQAARFDIVNRCSYTVWPAGIPRGGGRQLNSGQTWALDVPAGTSAARIWGRTGCRFDGSGRGSCQTGDCGGALSCSVSGRPPTTLAEYTLNGGNNLDYIDISVIDGFNIPMQFSSTSNGCNKVLTCRDSNCPDAYHQPNDVKTVTCPAGTNYRIVFCP