AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051167


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051167.t1 MTR_8g036160 95.000 360 15 1 1 360 1 357 0.0 614
MS.gene051167.t1 MTR_7g074935 69.972 363 77 10 1 360 1 334 9.02e-154 436
MS.gene051167.t1 MTR_4g101990 49.575 353 128 6 17 358 17 330 9.05e-78 242
MS.gene051167.t1 MTR_1g076710 42.779 367 148 11 1 351 1 321 7.90e-67 214
MS.gene051167.t1 MTR_1g061530 41.250 320 141 11 69 359 60 361 1.73e-57 191
MS.gene051167.t1 MTR_5g011680 41.319 288 121 6 15 272 4 273 2.96e-53 177
MS.gene051167.t1 MTR_5g010330 43.295 261 127 6 72 327 68 312 9.86e-53 177
MS.gene051167.t1 MTR_6g061670 51.142 219 87 8 64 272 43 251 8.08e-52 175
MS.gene051167.t1 MTR_6g061670 49.554 224 88 8 64 272 43 256 6.74e-51 172
MS.gene051167.t1 MTR_8g098390 47.761 201 101 3 73 273 96 292 7.30e-50 171
MS.gene051167.t1 MTR_8g031100 52.083 192 86 2 74 265 89 274 1.20e-48 167
MS.gene051167.t1 MTR_5g011620 42.586 263 120 6 15 273 4 239 1.58e-46 169
MS.gene051167.t1 MTR_7g077120 45.327 214 107 3 72 282 87 293 3.56e-43 153
MS.gene051167.t1 MTR_4g055803 41.629 221 120 4 55 272 40 254 2.77e-39 145
MS.gene051167.t1 MTR_4g098460 55.147 136 54 3 127 262 68 196 3.93e-38 138
MS.gene051167.t1 MTR_4g055833 40.000 220 123 4 56 272 38 251 5.08e-38 139
MS.gene051167.t1 MTR_4g098460 53.191 141 54 4 127 262 68 201 1.21e-35 131
MS.gene051167.t1 MTR_4g055813 51.145 131 59 3 147 276 21 147 2.21e-33 125
MS.gene051167.t1 MTR_5g011610 50.000 140 62 2 140 277 51 184 2.70e-33 126
MS.gene051167.t1 MTR_5g011610 49.533 107 50 1 134 240 201 303 8.55e-24 100
MS.gene051167.t1 MTR_1g079780 40.299 201 93 6 74 264 43 226 3.29e-33 126
MS.gene051167.t1 MTR_1g038960 38.983 236 124 8 71 303 82 300 2.47e-31 121
MS.gene051167.t1 MTR_7g116320 34.694 294 158 9 73 353 73 345 5.36e-31 121
MS.gene051167.t1 MTR_5g014360 39.720 214 105 7 72 278 118 314 3.62e-30 119
MS.gene051167.t1 MTR_4g055705 36.087 230 125 6 58 272 40 262 1.03e-27 110
MS.gene051167.t1 MTR_5g013390 37.129 202 110 8 71 267 78 267 4.66e-27 109
MS.gene051167.t1 MTR_7g116320 40.860 186 102 3 74 258 74 252 2.10e-26 106
MS.gene051167.t1 MTR_3g116100 36.667 240 121 11 71 306 90 302 5.09e-25 103
MS.gene051167.t1 MTR_6g060670 39.806 206 104 8 74 279 120 305 7.70e-25 103
MS.gene051167.t1 MTR_5g041430 37.173 191 103 7 73 260 49 225 3.11e-23 99.0
MS.gene051167.t1 MTR_1g038990 39.062 192 89 8 71 261 79 243 4.49e-23 98.6
MS.gene051167.t1 MTR_3g023560 43.651 126 64 3 143 265 60 181 2.03e-22 95.5
MS.gene051167.t1 MTR_3g068035 41.803 122 67 1 148 269 109 226 4.16e-20 90.1
MS.gene051167.t1 MTR_3g100470 39.837 123 71 3 147 267 103 224 2.52e-19 87.4
MS.gene051167.t1 MTR_5g066020 38.636 132 75 4 139 267 74 202 4.72e-19 85.9
MS.gene051167.t1 MTR_5g011700 46.729 107 52 3 156 261 10 112 9.99e-19 83.6
MS.gene051167.t1 MTR_4g098450 43.443 122 65 1 148 269 106 223 5.52e-18 83.6
MS.gene051167.t1 MTR_5g091630 34.158 202 84 5 62 262 34 187 2.46e-17 80.9
MS.gene051167.t1 MTR_7g080980 41.860 129 71 1 148 276 87 211 2.95e-17 81.3
MS.gene051167.t1 MTR_1g044155 41.803 122 67 1 148 269 156 273 1.18e-16 80.5
MS.gene051167.t1 MTR_5g011520 40.984 122 68 1 148 269 130 247 3.88e-16 78.6
MS.gene051167.t1 MTR_1g073860 40.164 122 69 1 148 269 124 241 4.15e-16 78.6
MS.gene051167.t1 MTR_8g036060 42.623 122 66 1 148 269 116 233 1.62e-15 76.6
MS.gene051167.t1 MTR_1g079810 39.344 122 70 1 148 269 104 221 1.25e-14 73.9
MS.gene051167.t1 MTR_5g080580 40.496 121 68 1 149 269 120 236 2.93e-14 73.2
MS.gene051167.t1 MTR_5g011590 35.514 107 66 2 96 202 36 139 3.67e-11 60.8
MS.gene051167.t1 MTR_5g011600 34.513 113 64 2 197 309 3 105 5.72e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051167.t1 AT4G12080 55.705 298 114 7 11 292 22 317 7.33e-91 276
MS.gene051167.t1 AT4G22770 55.036 278 104 7 6 274 13 278 5.17e-75 235
MS.gene051167.t1 AT4G22770 55.036 278 104 7 6 274 13 278 5.17e-75 235
MS.gene051167.t1 AT4G25320 58.049 205 74 5 73 267 85 287 1.07e-67 219
MS.gene051167.t1 AT4G00200 47.170 371 128 13 1 358 1 316 1.72e-67 215
MS.gene051167.t1 AT4G00200 47.170 371 128 13 1 358 1 316 1.72e-67 215
MS.gene051167.t1 AT2G33620 49.213 254 111 7 66 310 85 329 8.02e-64 207
MS.gene051167.t1 AT2G33620 49.213 254 111 7 66 310 85 329 8.02e-64 207
MS.gene051167.t1 AT2G33620 49.213 254 111 7 66 310 85 329 8.02e-64 207
MS.gene051167.t1 AT2G33620 49.213 254 111 7 66 310 85 329 8.02e-64 207
MS.gene051167.t1 AT5G62260 55.603 232 83 9 59 275 62 288 1.36e-63 208
MS.gene051167.t1 AT5G62260 55.603 232 83 9 59 275 62 288 1.36e-63 208
MS.gene051167.t1 AT5G62260 55.251 219 79 8 59 262 62 276 1.67e-60 196
MS.gene051167.t1 AT5G51590 52.273 220 73 4 73 262 77 294 4.43e-58 194
MS.gene051167.t1 AT2G45850 42.456 285 126 7 73 355 97 345 4.15e-52 176
MS.gene051167.t1 AT2G45850 42.456 285 126 7 73 355 97 345 4.15e-52 176
MS.gene051167.t1 AT1G63470 51.309 191 90 3 73 262 104 292 1.52e-50 173
MS.gene051167.t1 AT3G61310 51.415 212 87 6 70 277 97 296 2.30e-48 167
MS.gene051167.t1 AT2G45850 51.852 189 83 2 73 261 97 277 1.58e-47 162
MS.gene051167.t1 AT4G17950 42.308 234 85 7 73 271 130 348 7.44e-45 160
MS.gene051167.t1 AT1G63480 47.368 190 88 4 73 262 92 269 1.06e-42 152
MS.gene051167.t1 AT1G63480 47.368 190 88 4 73 262 92 269 1.06e-42 152
MS.gene051167.t1 AT1G63480 47.368 190 88 4 73 262 92 269 1.06e-42 152
MS.gene051167.t1 AT1G63480 47.368 190 88 4 73 262 92 269 1.06e-42 152
MS.gene051167.t1 AT1G63480 47.368 190 88 4 73 262 92 269 1.06e-42 152
MS.gene051167.t1 AT1G63480 47.368 190 88 4 73 262 98 275 1.15e-42 152
MS.gene051167.t1 AT1G63480 47.368 190 88 4 73 262 98 275 1.15e-42 152
MS.gene051167.t1 AT5G46640 44.978 229 97 8 64 275 87 303 2.48e-41 149
MS.gene051167.t1 AT3G04590 41.053 190 101 5 73 261 104 283 6.60e-35 130
MS.gene051167.t1 AT3G04590 41.053 190 101 5 73 261 104 283 9.48e-34 129
MS.gene051167.t1 AT2G36560 38.922 167 99 2 134 297 94 260 6.97e-27 112
MS.gene051167.t1 AT3G60870 40.171 117 64 2 145 261 86 196 1.19e-18 85.1
MS.gene051167.t1 AT5G49700 37.600 125 74 3 147 267 85 209 4.83e-18 83.6
MS.gene051167.t1 AT2G42940 41.129 124 69 1 139 262 74 193 2.06e-17 81.3
MS.gene051167.t1 AT3G55560 40.984 122 69 1 148 269 118 236 8.01e-17 80.5
MS.gene051167.t1 AT1G14490 32.418 182 93 5 147 319 51 211 1.02e-16 79.0
MS.gene051167.t1 AT1G14490 32.418 182 93 5 147 319 32 192 1.06e-16 78.2
MS.gene051167.t1 AT5G28590 38.333 120 49 2 142 261 27 121 6.27e-16 76.3
MS.gene051167.t1 AT2G35270 40.984 122 68 1 148 269 108 225 1.18e-15 77.0
MS.gene051167.t1 AT4G14465 41.228 114 63 1 148 261 97 206 1.27e-15 76.6
MS.gene051167.t1 AT4G17800 40.984 122 68 1 148 269 112 229 2.50e-15 75.9
MS.gene051167.t1 AT4G22810 41.600 125 66 2 148 269 135 255 6.17e-14 72.4
MS.gene051167.t1 AT4G12050 41.463 123 67 2 148 269 148 266 1.21e-13 71.6
MS.gene051167.t1 AT1G76500 33.333 123 69 2 148 261 102 220 2.25e-13 70.5
MS.gene051167.t1 AT3G04570 36.154 130 71 2 148 269 110 235 9.35e-13 68.6
MS.gene051167.t1 AT4G35390 41.379 116 62 2 148 261 93 204 2.05e-12 67.4
MS.gene051167.t1 AT2G45430 40.476 126 67 2 148 269 119 240 3.78e-12 67.0

Find 122 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCGTCATCCAGATTCTTC+TGG 0.185964 8.2:-63025479 MS.gene051167:CDS
GCTGCAGCTGTGGCTACTTC+AGG 0.227842 8.2:+63027403 None:intergenic
CTTTCTCAGCACTATTAGTT+TGG 0.237596 8.2:+63023459 None:intergenic
TTTCTCAGCACTATTAGTTT+GGG 0.258422 8.2:+63023460 None:intergenic
AGAAGTGAAATTTGAGTTAA+GGG 0.292527 8.2:+63023391 None:intergenic
AGGGGTAGACCAAGGAAATA+TGG 0.299572 8.2:-63027283 MS.gene051167:CDS
CCGCCTTTCGAAGGGAAAAC+TGG 0.306082 8.2:-63023358 MS.gene051167:CDS
CTGCCCTGCTTCTTGTTCCT+TGG 0.322269 8.2:+63024311 None:intergenic
TGATACGCGGATGGAGCTTC+TGG 0.325691 8.2:+63027466 None:intergenic
GGACATGTACTGCAAAATTC+TGG 0.336452 8.2:-63023416 MS.gene051167:CDS
CGATAATCAACTTAATTATC+AGG 0.338753 8.2:+63023275 None:intergenic
TTTGTAGGATATTACAAATA+AGG 0.345980 8.2:-63025576 MS.gene051167:intron
TTTGAGATACTTTCCTTGTC+TGG 0.346259 8.2:-63024358 MS.gene051167:CDS
GAGAAGTGAAATTTGAGTTA+AGG 0.349352 8.2:+63023390 None:intergenic
TCCGTCATCCAGATTCTTCT+GGG 0.353528 8.2:-63025478 MS.gene051167:CDS
GTAGTAGGCGGTGGAGTTGC+TGG 0.359916 8.2:-63024250 MS.gene051167:CDS
TGGTTTATTTCAGGTGGTGG+TGG 0.379225 8.2:-63023594 MS.gene051167:intron
TCAGGGTTATGAACCTGGTT+TGG 0.383570 8.2:+63027421 None:intergenic
TGGTTTGGAACTTCATTCCT+TGG 0.406728 8.2:+63027436 None:intergenic
CTACTTCAGGGTTATGAACC+TGG 0.411417 8.2:+63027416 None:intergenic
CTGCAGCTGTGGCTACTTCA+GGG 0.413234 8.2:+63027404 None:intergenic
GTAGCCACAGCTGCAGCCGC+AGG 0.416742 8.2:-63027397 MS.gene051167:CDS
CCATCTGGCCCATATTTCCT+TGG 0.419968 8.2:+63027274 None:intergenic
CCGCCTACTACGCGACCATC+AGG 0.426116 8.2:+63024262 None:intergenic
AGGTATCAATCCTGCGGTTA+CGG 0.429267 8.2:-63027497 MS.gene051167:CDS
GTATCAGCAGCAGGAGCAGC+AGG 0.430433 8.2:+63027358 None:intergenic
TTCCCCGGTGAGTGTAGGTT+TGG 0.435635 8.2:-63027326 MS.gene051167:CDS
ATATGTGTCTTATCGGCTAC+TGG 0.439406 8.2:-63025521 MS.gene051167:CDS
TCCTCCTGCGGCTGCAGCTG+TGG 0.444728 8.2:+63027393 None:intergenic
GCGAGCAATATGTGTCTTAT+CGG 0.444838 8.2:-63025528 MS.gene051167:CDS
GCACTATTAGTTTGGGGTGG+CGG 0.448053 8.2:+63023467 None:intergenic
CTTCGAAAGGCGGTGGGTGG+AGG 0.455584 8.2:+63023368 None:intergenic
GAGGATGCCATGGGTGGCGG+TGG 0.459212 8.2:-63023437 MS.gene051167:CDS
GGTTTATTTCAGGTGGTGGT+GGG 0.467575 8.2:-63023593 MS.gene051167:intron
GGCGGAGCTGAAGATGAAAT+AGG 0.469098 8.2:+63027223 None:intergenic
CTCCACCCACCGCCTTTCGA+AGG 0.470896 8.2:-63023367 MS.gene051167:CDS
AACTAATAGTGCTGAGAAAG+AGG 0.473307 8.2:-63023456 MS.gene051167:CDS
GATTTACTGACGCACCTCAT+AGG 0.475961 8.2:+63025445 None:intergenic
ATGGAACCGTTAAGAAGAAA+AGG 0.482189 8.2:-63027303 MS.gene051167:CDS
TTCTCAGCACTATTAGTTTG+GGG 0.490838 8.2:+63023461 None:intergenic
GTCTCACTGGCAAGCCCTGA+TGG 0.493252 8.2:-63024277 MS.gene051167:CDS
AGCCCTGATGGTCGCGTAGT+AGG 0.496107 8.2:-63024265 MS.gene051167:CDS
TATAGCTGCCACTCCTGTGC+AGG 0.498450 8.2:-63024221 MS.gene051167:intron
CTATTAGTTTGGGGTGGCGG+AGG 0.501818 8.2:+63023470 None:intergenic
GCAAGTGAAACCACAGGGGA+TGG 0.503140 8.2:-63027173 MS.gene051167:CDS
CATTTCATCACTGTCAATGC+CGG 0.503879 8.2:-63025721 MS.gene051167:CDS
CCGGTGAGTGTAGGTTTGGA+TGG 0.506054 8.2:-63027322 MS.gene051167:CDS
AAATTTGTGATGGATCATCT+AGG 0.506878 8.2:-63027133 MS.gene051167:intron
CGCCTTTCGAAGGGAAAACT+GGG 0.507842 8.2:-63023357 MS.gene051167:CDS
CCAAGGAAATATGGGCCAGA+TGG 0.510350 8.2:-63027274 MS.gene051167:CDS
GGGGTAGACCAAGGAAATAT+GGG 0.519638 8.2:-63027282 MS.gene051167:CDS
GATGAGAAGTCTTTAGAAGA+AGG 0.519933 8.2:+63027202 None:intergenic
GGTGTTTCCCCGGTGAGTGT+AGG 0.524269 8.2:-63027331 MS.gene051167:CDS
TGATACTGTCGGTGTTTCCC+CGG 0.528819 8.2:-63027341 MS.gene051167:CDS
GGCATGTTGACAGACCCATC+TGG 0.529102 8.2:+63027259 None:intergenic
CCATCCAAACCTACACTCAC+CGG 0.530701 8.2:+63027322 None:intergenic
GAAAGGATGTTTACCTGCAC+AGG 0.532950 8.2:+63024208 None:intergenic
CAAGGAAATATGGGCCAGAT+GGG 0.533009 8.2:-63027273 MS.gene051167:CDS
TCCCTTCGAAAGGCGGTGGG+TGG 0.534632 8.2:+63023365 None:intergenic
AGGTGGAATGAGTGTCTCAC+TGG 0.534737 8.2:-63024290 MS.gene051167:CDS
GTTCCTTGGTTAGTATCAGT+AGG 0.535654 8.2:+63024325 None:intergenic
TGGAACCGTTAAGAAGAAAA+GGG 0.536900 8.2:-63027302 MS.gene051167:CDS
GGCGCTATCACCGTAACCGC+AGG 0.538939 8.2:+63027487 None:intergenic
CAAGGAACAAGAAGCAGGGC+AGG 0.539556 8.2:-63024310 MS.gene051167:CDS
CATCCAAACCTACACTCACC+GGG 0.541795 8.2:+63027323 None:intergenic
GATGGTCGCGTAGTAGGCGG+TGG 0.544887 8.2:-63024259 MS.gene051167:CDS
GCCACAGCTGCAGCCGCAGG+AGG 0.547008 8.2:-63027394 MS.gene051167:CDS
AAAGAGGATGCCATGGGTGG+CGG 0.548375 8.2:-63023440 MS.gene051167:CDS
TCCACCCACCGCCTTTCGAA+GGG 0.550500 8.2:-63023366 MS.gene051167:CDS
GGTCAACATGCACTCTATGC+CGG 0.563460 8.2:-63023336 MS.gene051167:CDS
CTAACCAAGGAACAAGAAGC+AGG 0.565981 8.2:-63024315 MS.gene051167:CDS
TGCACCAGCCACATTTACTC+AGG 0.575550 8.2:-63023513 MS.gene051167:CDS
AGGTGCTGCAGATACTGCAA+TGG 0.578343 8.2:+63023490 None:intergenic
TGCTGAGAAAGAGGATGCCA+TGG 0.579066 8.2:-63023447 MS.gene051167:CDS
GAAATAGGCAATGGTGACAA+TGG 0.584349 8.2:+63027238 None:intergenic
ACACCGACAGTATCAGCAGC+AGG 0.584936 8.2:+63027349 None:intergenic
TACATGTCCACCGCCACCCA+TGG 0.588243 8.2:+63023430 None:intergenic
ATGGCCTGAGTAAATGTGGC+TGG 0.592651 8.2:+63023509 None:intergenic
TTCAGATCTTGATGGCCGCT+AGG 0.596191 8.2:+63023560 None:intergenic
TGTGAAGCAAGTGAAACCAC+AGG 0.599772 8.2:-63027179 MS.gene051167:CDS
ATATGCATGGAAGGAAGAGA+AGG 0.600541 8.2:-63027517 None:intergenic
GCTCCTGCTGCTGATACTGT+CGG 0.601485 8.2:-63027352 MS.gene051167:CDS
TGCATTCAAACATACCTCGC+CGG 0.603353 8.2:+63025702 None:intergenic
ACATTCAATATATGCATGGA+AGG 0.604410 8.2:-63027526 None:intergenic
CCTGATGGTCGCGTAGTAGG+CGG 0.607126 8.2:-63024262 MS.gene051167:CDS
GATGTTTACCTGCACAGGAG+TGG 0.611223 8.2:+63024213 None:intergenic
CTCTTGTATTCCATCCCCTG+TGG 0.611712 8.2:+63027163 None:intergenic
TCAGCACTATTAGTTTGGGG+TGG 0.613413 8.2:+63023464 None:intergenic
GCCATCAAGATCTGAAAACA+AGG 0.613990 8.2:-63023553 MS.gene051167:CDS
GGAACAAGAAGCAGGGCAGG+TGG 0.614997 8.2:-63024307 MS.gene051167:CDS
CCGTCATCCAGATTCTTCTG+GGG 0.615042 8.2:-63025477 MS.gene051167:CDS
CGTCATCCAGATTCTTCTGG+GGG 0.617667 8.2:-63025476 MS.gene051167:CDS
TGCAATGGCCTGAGTAAATG+TGG 0.618756 8.2:+63023505 None:intergenic
CACAGGGGATGGAATACAAG+AGG 0.618940 8.2:-63027162 MS.gene051167:CDS
GAAATGAATGGGCACTCTGA+TGG 0.621101 8.2:-63025760 MS.gene051167:CDS
CCCCAGAAGAATCTGGATGA+CGG 0.622155 8.2:+63025477 None:intergenic
GCTGGTGCATAATCAGACTT+AGG 0.632613 8.2:+63023527 None:intergenic
CCTTGGTGCGACATGATACG+CGG 0.636660 8.2:+63027453 None:intergenic
GCTGAAGATGAAATAGGCAA+TGG 0.637503 8.2:+63027229 None:intergenic
CGCCTACTACGCGACCATCA+GGG 0.640739 8.2:+63024263 None:intergenic
GAGAAGTCTTTAGAAGAAGG+CGG 0.641757 8.2:+63027205 None:intergenic
AGAAGAAAAGGGGTAGACCA+AGG 0.648040 8.2:-63027291 MS.gene051167:CDS
AAGGAATGAAGTTCCAAACC+AGG 0.649098 8.2:-63027434 MS.gene051167:CDS
GGTGCGACATGATACGCGGA+TGG 0.661584 8.2:+63027457 None:intergenic
TAACCAAGGAACAAGAAGCA+GGG 0.661712 8.2:-63024314 MS.gene051167:CDS
GTGAAGCAAGTGAAACCACA+GGG 0.662135 8.2:-63027178 MS.gene051167:CDS
GCATTGACAGTGATGAAATG+CGG 0.670620 8.2:+63025724 None:intergenic
GATAAGACACATATTGCTCG+CGG 0.677068 8.2:+63025530 None:intergenic
CATCACTGTCAATGCCGGCG+AGG 0.679492 8.2:-63025716 MS.gene051167:intron
GAGAAAGAGGATGCCATGGG+TGG 0.680486 8.2:-63023443 MS.gene051167:CDS
CCGCGTATCATGTCGCACCA+AGG 0.680662 8.2:-63027453 MS.gene051167:CDS
ACAGGGGATGGAATACAAGA+GGG 0.685377 8.2:-63027161 MS.gene051167:CDS
GTGGGAAGCTTTCTGCCTAG+CGG 0.688039 8.2:-63023575 MS.gene051167:CDS
GGAACCGTTAAGAAGAAAAG+GGG 0.688506 8.2:-63027301 MS.gene051167:CDS
TATGCCGGACACAAGAAAAG+CGG 0.691783 8.2:-63023321 MS.gene051167:CDS
ATGCCTACTGATACTAACCA+AGG 0.692561 8.2:-63024328 MS.gene051167:CDS
AGGCATGAATGATCCAGACA+AGG 0.701025 8.2:+63024345 None:intergenic
AGCAGCAGTAGATCCTCCTG+CGG 0.704949 8.2:+63027381 None:intergenic
AAGAGAAGGTATCAATCCTG+CGG 0.707222 8.2:-63027503 MS.gene051167:CDS
GCTGAGAAAGAGGATGCCAT+GGG 0.708603 8.2:-63023446 MS.gene051167:CDS
ATCCAAACCTACACTCACCG+GGG 0.724447 8.2:+63027324 None:intergenic
TGAAGCAAGTGAAACCACAG+GGG 0.784596 8.2:-63027177 MS.gene051167:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATTCATTATAACTT+TGG + chr8.2:63025182-63025201 None:intergenic 10.0%
!! TCAAGTTTAATTAATTCTTA+CGG - chr8.2:63024239-63024258 MS.gene051167:CDS 15.0%
!!! AATTCAGAAATATTTTTTGT+TGG - chr8.2:63025001-63025020 MS.gene051167:intron 15.0%
!!! ATTTTGTAAATTAATCAAGA+TGG - chr8.2:63025640-63025659 MS.gene051167:intron 15.0%
!!! GATTGATAATATTTATAATC+AGG - chr8.2:63025502-63025521 MS.gene051167:CDS 15.0%
!! AATTAATTAATTCCGCTATT+GGG - chr8.2:63024196-63024215 MS.gene051167:intron 20.0%
!! ACTGAAATTAATATAAGCAA+AGG - chr8.2:63024598-63024617 MS.gene051167:intron 20.0%
!! ACTGAAATTAATATAAGCAA+CGG - chr8.2:63024598-63024617 MS.gene051167:intron 20.0%
!! ACTGAAATTAATATAAGCAA+CGG + chr8.2:63024617-63024598 None:intergenic 20.0%
!! AGCATTAAATCAATGTATAA+AGG + chr8.2:63023701-63023720 None:intergenic 20.0%
!! ATTCTTTACAAATTACAATG+AGG + chr8.2:63024517-63024536 None:intergenic 20.0%
!! ATTTGTAAAGAATTACAATG+AGG - chr8.2:63024546-63024565 MS.gene051167:intron 20.0%
!! TAAGTAAATTCTATGTATCA+AGG - chr8.2:63024337-63024356 MS.gene051167:CDS 20.0%
!! TAAGTAAATTCTATGTATCA+AGG + chr8.2:63024356-63024337 None:intergenic 20.0%
!! TACACAACTTGTATTTATAA+TGG + chr8.2:63024075-63024094 None:intergenic 20.0%
!! TCCAAAACATAATCAAATAT+CGG - chr8.2:63026175-63026194 MS.gene051167:intron 20.0%
!! TTCTTTACAAATTACAATGA+GGG + chr8.2:63024516-63024535 None:intergenic 20.0%
!! TTTGTAAAGAATTACAATGA+GGG - chr8.2:63024547-63024566 MS.gene051167:intron 20.0%
!! TTTGTAGGATATTACAAATA+AGG - chr8.2:63025221-63025240 MS.gene051167:intron 20.0%
!!! CTATGAAGTTTTACAATTAA+AGG + chr8.2:63023972-63023991 None:intergenic 20.0%
!!! CTTTTGTTTATAAACAGTAA+CGG - chr8.2:63024650-63024669 MS.gene051167:intron 20.0%
!!! GTTTTACAATTAAAGGAATA+TGG + chr8.2:63023965-63023984 None:intergenic 20.0%
!!! GTTTTTTGTTTATATGAGAA+TGG - chr8.2:63025553-63025572 MS.gene051167:CDS 20.0%
!!! TACACAACTTGTTTTTATAA+TGG + chr8.2:63024708-63024727 None:intergenic 20.0%
!!! TATTTTTCTTGGTTTATTTC+AGG - chr8.2:63027194-63027213 MS.gene051167:CDS 20.0%
! AAACAGTGAAATATTTGGAA+AGG + chr8.2:63026820-63026839 None:intergenic 25.0%
! AAACATCAACAAAAGGAAAA+AGG + chr8.2:63023778-63023797 None:intergenic 25.0%
! AACACCAAAAAACAAAAAAC+AGG + chr8.2:63026045-63026064 None:intergenic 25.0%
! AAGGCAACTTGTATTTATAA+TGG - chr8.2:63024356-63024375 MS.gene051167:CDS 25.0%
! AAGGCAACTTGTATTTATAA+TGG + chr8.2:63024375-63024356 None:intergenic 25.0%
! AATATAGTTGCCAAACAAAT+AGG - chr8.2:63026694-63026713 MS.gene051167:intron 25.0%
! AATGTCTTCTCATACTAAAT+AGG - chr8.2:63026926-63026945 MS.gene051167:intron 25.0%
! AATTCTCAATCCTATTTGTT+TGG + chr8.2:63026707-63026726 None:intergenic 25.0%
! ACCATAAAACAAAAGAAAAC+AGG + chr8.2:63025992-63026011 None:intergenic 25.0%
! ATACCTTAATAAGTGTGAAA+TGG + chr8.2:63024440-63024459 None:intergenic 25.0%
! ATAGGAAACAGTGAAATATT+TGG + chr8.2:63026825-63026844 None:intergenic 25.0%
! ATATTAAACAGAAGATACTG+TGG + chr8.2:63026387-63026406 None:intergenic 25.0%
! CTGTTTACAAAGATTTGTAT+AGG + chr8.2:63026843-63026862 None:intergenic 25.0%
! GAATTAATTAATTCCGCTAT+TGG - chr8.2:63024195-63024214 MS.gene051167:intron 25.0%
! GTTCAGTAAATTAATCAAGA+TGG - chr8.2:63025594-63025613 MS.gene051167:intron 25.0%
! TTAAATTCAATCACATGTGT+TGG - chr8.2:63027101-63027120 MS.gene051167:intron 25.0%
! TTATGTAAAGTATGGATCTA+AGG - chr8.2:63025456-63025475 MS.gene051167:intron 25.0%
! TTGTTTGGCAACTATATTAA+GGG + chr8.2:63026692-63026711 None:intergenic 25.0%
! TTTGTTTGGCAACTATATTA+AGG + chr8.2:63026693-63026712 None:intergenic 25.0%
!! ACCGATATTTGATTATGTTT+TGG + chr8.2:63026179-63026198 None:intergenic 25.0%
!! AGAAGTGAAATTTGAGTTAA+GGG + chr8.2:63027409-63027428 None:intergenic 25.0%
!! AGGATCACTTATATTTTTCT+TGG - chr8.2:63027183-63027202 MS.gene051167:CDS 25.0%
!! CATTATAACTTTGGAAGTAA+TGG + chr8.2:63025173-63025192 None:intergenic 25.0%
!! GAATGTTGATGTATTGATAT+TGG - chr8.2:63026359-63026378 MS.gene051167:intron 25.0%
!! GTTCTGTTTTATGTAAAGTA+TGG - chr8.2:63025448-63025467 MS.gene051167:intron 25.0%
!! TATTATCTTGCTATACTCTT+TGG - chr8.2:63025198-63025217 MS.gene051167:intron 25.0%
!! TCAAAGAGGTTTTCAAAATA+CGG + chr8.2:63025869-63025888 None:intergenic 25.0%
!! TGATATCATTTTCACAACAA+GGG - chr8.2:63025244-63025263 MS.gene051167:intron 25.0%
!! TTAGGTATTGCAATAATCAT+CGG - chr8.2:63025480-63025499 MS.gene051167:CDS 25.0%
!! TTTTCAAAATACGGTCAATT+TGG + chr8.2:63025860-63025879 None:intergenic 25.0%
!!! AAATTACAATGAGGGTATTT+TGG - chr8.2:63024763-63024782 MS.gene051167:intron 25.0%
!!! AATTACAATGAGGGTATTTT+GGG - chr8.2:63024764-63024783 MS.gene051167:intron 25.0%
!!! TATTTTGAAAACCTCTTTGA+GGG - chr8.2:63025869-63025888 MS.gene051167:intron 25.0%
!!! TCCTGTTTTCTTTTGTTTTA+TGG - chr8.2:63025988-63026007 MS.gene051167:intron 25.0%
!!! TGTTCCTGTTTTTTGTTTTT+TGG - chr8.2:63026038-63026057 MS.gene051167:intron 25.0%
AACATAATAGTAGTCAATCC+CGG + chr8.2:63026226-63026245 None:intergenic 30.0%
AACCTAGAAAGTTGTAAACT+CGG + chr8.2:63024013-63024032 None:intergenic 30.0%
AATTTGTATAACGCTTAGGA+AGG + chr8.2:63025143-63025162 None:intergenic 30.0%
ACACTTCAAACATCAACAAA+AGG + chr8.2:63023785-63023804 None:intergenic 30.0%
ACATTTCGCAAATTACAATG+AGG - chr8.2:63024754-63024773 MS.gene051167:intron 30.0%
AGACATAGAATTGCAAGTTT+AGG + chr8.2:63026953-63026972 None:intergenic 30.0%
ATACCTTAACAAGTGTGAAA+TGG - chr8.2:63024831-63024850 MS.gene051167:intron 30.0%
ATATGTTCAGTAGTCAATAG+TGG - chr8.2:63025739-63025758 MS.gene051167:CDS 30.0%
CAGAAGCTTCAAATGAATTT+AGG + chr8.2:63025417-63025436 None:intergenic 30.0%
CATCAATTTGTATAACGCTT+AGG + chr8.2:63025147-63025166 None:intergenic 30.0%
CATTTCGCAAATTACAATGA+GGG - chr8.2:63024755-63024774 MS.gene051167:intron 30.0%
GACATAGAATTGCAAGTTTA+GGG + chr8.2:63026952-63026971 None:intergenic 30.0%
GTATAGGAATCATGTTAACT+TGG + chr8.2:63027013-63027032 None:intergenic 30.0%
TCACCATTTCACACTTATTA+AGG - chr8.2:63024434-63024453 MS.gene051167:intron 30.0%
TGTTTGGCAACTATATTAAG+GGG + chr8.2:63026691-63026710 None:intergenic 30.0%
TTCTACTAATGTATTGAGTC+AGG - chr8.2:63025687-63025706 MS.gene051167:intron 30.0%
TTGTTTATAAACAGTAACGG+AGG - chr8.2:63024653-63024672 MS.gene051167:intron 30.0%
! AAAGTATGGATCTAAGGTTT+AGG - chr8.2:63025462-63025481 MS.gene051167:CDS 30.0%
! GAGAAGTGAAATTTGAGTTA+AGG + chr8.2:63027410-63027429 None:intergenic 30.0%
! GTGATATCATTTTCACAACA+AGG - chr8.2:63025243-63025262 MS.gene051167:intron 30.0%
! TATAAGTGATCCTTCTTTTG+AGG + chr8.2:63027176-63027195 None:intergenic 30.0%
! TGCTTTTAAACAGTAACAGA+GGG + chr8.2:63024410-63024429 None:intergenic 30.0%
! TGTTTATAAACAGTAACGGA+GGG - chr8.2:63024654-63024673 MS.gene051167:intron 30.0%
! TTTCTCAGCACTATTAGTTT+GGG + chr8.2:63027340-63027359 None:intergenic 30.0%
! TTTTCTTGGTTTATTTCAGG+TGG - chr8.2:63027197-63027216 MS.gene051167:CDS 30.0%
!! AAATTACAATGAGGGCATTA+TGG + chr8.2:63024508-63024527 None:intergenic 30.0%
!! AAATTTGTGATGGATCATCT+AGG - chr8.2:63023664-63023683 MS.gene051167:intron 30.0%
!! AATTACAATGAGGGCATTAT+GGG + chr8.2:63024507-63024526 None:intergenic 30.0%
!! AGCTGCTATTTGATTTTAGT+AGG - chr8.2:63025828-63025847 MS.gene051167:intron 30.0%
!! ATGAATTTAGGCTTTAAGCA+TGG + chr8.2:63025405-63025424 None:intergenic 30.0%
!! CATTGATTTAATGCTCTTGT+TGG - chr8.2:63023706-63023725 MS.gene051167:intron 30.0%
!! CTTTTGCTTTTAAACAGTAG+CGG - chr8.2:63024857-63024876 MS.gene051167:intron 30.0%
!! GTATTTTGAAAACCTCTTTG+AGG - chr8.2:63025868-63025887 MS.gene051167:intron 30.0%
!! TTGCTTTTAAACAGTAACAG+AGG + chr8.2:63024411-63024430 None:intergenic 30.0%
!!! TTTTTTCTTCCTCTGTTGTA+TGG - chr8.2:63025945-63025964 MS.gene051167:intron 30.0%
!!! TTTTTTGTTGGTACTTTTGC+AGG - chr8.2:63025013-63025032 MS.gene051167:intron 30.0%
ACAAACATGAACACTGTACA+TGG - chr8.2:63027042-63027061 MS.gene051167:intron 35.0%
ACCTAGAAAGTTGTAAACTC+GGG + chr8.2:63024012-63024031 None:intergenic 35.0%
ACTATATTAAGGGGAAATGG+TGG + chr8.2:63026682-63026701 None:intergenic 35.0%
AGAAACCATCAAGCAATGTT+AGG + chr8.2:63025916-63025935 None:intergenic 35.0%
AGGAAGGTAAGAATAAAGGA+CGG + chr8.2:63025127-63025146 None:intergenic 35.0%
ATACCTTAATAAGCGCGAAA+TGG - chr8.2:63024624-63024643 MS.gene051167:intron 35.0%
ATCCTTTCACTCTTTACACT+TGG - chr8.2:63026604-63026623 MS.gene051167:intron 35.0%
ATGGAACCGTTAAGAAGAAA+AGG - chr8.2:63023494-63023513 MS.gene051167:CDS 35.0%
CTTCTAAATATGCTCTTGCA+GGG - chr8.2:63026412-63026431 MS.gene051167:intron 35.0%
CTTTCTCAGCACTATTAGTT+TGG + chr8.2:63027341-63027360 None:intergenic 35.0%
GAAACCATCAAGCAATGTTA+GGG + chr8.2:63025915-63025934 None:intergenic 35.0%
GAATTACAATGAGGGTAGTT+TGG - chr8.2:63024555-63024574 MS.gene051167:intron 35.0%
GATTTAATGCTCTTGTTGGT+TGG - chr8.2:63023710-63023729 MS.gene051167:intron 35.0%
GCAACTATATTAAGGGGAAA+TGG + chr8.2:63026685-63026704 None:intergenic 35.0%
GCTTAGGAAGGTAAGAATAA+AGG + chr8.2:63025131-63025150 None:intergenic 35.0%
TAAACCCTAACATTGCTTGA+TGG - chr8.2:63025908-63025927 MS.gene051167:intron 35.0%
TACAGTGTTCATGTTTGTGT+CGG + chr8.2:63027040-63027059 None:intergenic 35.0%
TACAGTTCCAAACTCAATAG+CGG + chr8.2:63026331-63026350 None:intergenic 35.0%
TAGTCTGAGCTGATATTTGA+TGG - chr8.2:63026291-63026310 MS.gene051167:intron 35.0%
TCAAATATCAGCTCAGACTA+TGG + chr8.2:63026291-63026310 None:intergenic 35.0%
TCCTTTCACTCTTTACACTT+GGG - chr8.2:63026605-63026624 MS.gene051167:intron 35.0%
TCTTCTAAATATGCTCTTGC+AGG - chr8.2:63026411-63026430 MS.gene051167:intron 35.0%
TGGAACCGTTAAGAAGAAAA+GGG - chr8.2:63023495-63023514 MS.gene051167:CDS 35.0%
TGGATCATCTAGGTAATTGT+TGG - chr8.2:63023674-63023693 MS.gene051167:intron 35.0%
TGGATTGAAGGAAAGTAGTT+CGG + chr8.2:63023874-63023893 None:intergenic 35.0%
TTTCGCGCTTATTAAGGTAT+CGG + chr8.2:63024624-63024643 None:intergenic 35.0%
! AACTAATAGTGCTGAGAAAG+AGG - chr8.2:63027341-63027360 MS.gene051167:CDS 35.0%
! ACTTTTGCAGGTGAAATGAA+TGG - chr8.2:63025025-63025044 MS.gene051167:intron 35.0%
! CTTTTGCAGGTGAAATGAAT+GGG - chr8.2:63025026-63025045 MS.gene051167:intron 35.0%
! GATGAGAAGTCTTTAGAAGA+AGG + chr8.2:63023598-63023617 None:intergenic 35.0%
! TCACCATTTCACACTTGTTA+AGG + chr8.2:63024837-63024856 None:intergenic 35.0%
! TCTACCCCTTTTCTTCTTAA+CGG + chr8.2:63023503-63023522 None:intergenic 35.0%
! TTCTCAGCACTATTAGTTTG+GGG + chr8.2:63027339-63027358 None:intergenic 35.0%
! TTTGAGATACTTTCCTTGTC+TGG - chr8.2:63026439-63026458 MS.gene051167:intron 35.0%
!! CAAATTTGAGAGCTTTGTTG+TGG + chr8.2:63023894-63023913 None:intergenic 35.0%
!! GAGATCGTTTTTGTGTAAGT+AGG - chr8.2:63026987-63027006 MS.gene051167:intron 35.0%
!! TGCTATACTCTTTGGTTTGT+AGG - chr8.2:63025206-63025225 MS.gene051167:intron 35.0%
!!! TCCTTGTTTTCAGATCTTGA+TGG + chr8.2:63027248-63027267 None:intergenic 35.0%
AAGGAATGAAGTTCCAAACC+AGG - chr8.2:63023363-63023382 MS.gene051167:CDS 40.0%
ACCCAAGTGTAAAGAGTGAA+AGG + chr8.2:63026609-63026628 None:intergenic 40.0%
ATGCCTACTGATACTAACCA+AGG - chr8.2:63026469-63026488 MS.gene051167:intron 40.0%
CATTTCATCACTGTCAATGC+CGG - chr8.2:63025076-63025095 MS.gene051167:intron 40.0%
CCTAGAAAGTTGTAAACTCG+GGG + chr8.2:63024011-63024030 None:intergenic 40.0%
CTTAAGTCCGCTATTGAGTT+TGG - chr8.2:63026321-63026340 MS.gene051167:intron 40.0%
GAAATAGGCAATGGTGACAA+TGG + chr8.2:63023562-63023581 None:intergenic 40.0%
GAAGGTAAGAATAAAGGACG+GGG + chr8.2:63025125-63025144 None:intergenic 40.0%
GAGGGCGAAAAAATTTGTGA+TGG - chr8.2:63023654-63023673 MS.gene051167:intron 40.0%
GATAAGACACATATTGCTCG+CGG + chr8.2:63025270-63025289 None:intergenic 40.0%
GATGCAACACTTAGGATTGA+AGG + chr8.2:63027151-63027170 None:intergenic 40.0%
GCCATCAAGATCTGAAAACA+AGG - chr8.2:63027244-63027263 MS.gene051167:CDS 40.0%
GCGAGCAATATGTGTCTTAT+CGG - chr8.2:63025269-63025288 MS.gene051167:intron 40.0%
GCTGAAGATGAAATAGGCAA+TGG + chr8.2:63023571-63023590 None:intergenic 40.0%
GGAACCGTTAAGAAGAAAAG+GGG - chr8.2:63023496-63023515 MS.gene051167:CDS 40.0%
GGAAGGTAAGAATAAAGGAC+GGG + chr8.2:63025126-63025145 None:intergenic 40.0%
GGACATGTACTGCAAAATTC+TGG - chr8.2:63027381-63027400 MS.gene051167:CDS 40.0%
GTTCCTTGGTTAGTATCAGT+AGG + chr8.2:63026475-63026494 None:intergenic 40.0%
GTTGCATCTTCCTCAAAAGA+AGG - chr8.2:63027163-63027182 MS.gene051167:CDS 40.0%
TAACCAAGGAACAAGAAGCA+GGG - chr8.2:63026483-63026502 MS.gene051167:intron 40.0%
TCACCATTTCGCGCTTATTA+AGG + chr8.2:63024630-63024649 None:intergenic 40.0%
TCCTCTGTTGTATGGTTTCT+CGG - chr8.2:63025953-63025972 MS.gene051167:intron 40.0%
TTGAGGAAGATGCAACACTT+AGG + chr8.2:63027159-63027178 None:intergenic 40.0%
! ATATGTGTCTTATCGGCTAC+TGG - chr8.2:63025276-63025295 MS.gene051167:intron 40.0%
! GACATCTTTTGACCCAATAG+CGG + chr8.2:63024211-63024230 None:intergenic 40.0%
! GAGAAGTCTTTAGAAGAAGG+CGG + chr8.2:63023595-63023614 None:intergenic 40.0%
! GCATTGACAGTGATGAAATG+CGG + chr8.2:63025076-63025095 None:intergenic 40.0%
! GTTTGAAGTGTATCTCTGTC+TGG - chr8.2:63023794-63023813 MS.gene051167:intron 40.0%
! TCAAGATGGTGAGAAGCATA+TGG - chr8.2:63025608-63025627 MS.gene051167:intron 40.0%
! TCTTGGTTTATTTCAGGTGG+TGG - chr8.2:63027200-63027219 MS.gene051167:CDS 40.0%
! TGGTTTGGAACTTCATTCCT+TGG + chr8.2:63023364-63023383 None:intergenic 40.0%
!! AAGAGAAGGTATCAATCCTG+CGG - chr8.2:63023294-63023313 MS.gene051167:CDS 40.0%
!! AGAGCTTTGTTGTGGATTGA+AGG + chr8.2:63023886-63023905 None:intergenic 40.0%
!! TGCTTTTAAACAGTAGCGGA+GGG - chr8.2:63024861-63024880 MS.gene051167:intron 40.0%
!! TTGCTTTTAAACAGTAGCGG+AGG - chr8.2:63024860-63024879 MS.gene051167:intron 40.0%
!!! AAACCTCTTTGAGGGCATTT+TGG - chr8.2:63025877-63025896 MS.gene051167:intron 40.0%
!!! AACCTCTTTGAGGGCATTTT+GGG - chr8.2:63025878-63025897 MS.gene051167:intron 40.0%
ACAGGGGATGGAATACAAGA+GGG - chr8.2:63023636-63023655 MS.gene051167:intron 45.0%
ACCGAGAAACCATACAACAG+AGG + chr8.2:63025957-63025976 None:intergenic 45.0%
AGAAGAAAAGGGGTAGACCA+AGG - chr8.2:63023506-63023525 MS.gene051167:CDS 45.0%
AGGCATGAATGATCCAGACA+AGG + chr8.2:63026455-63026474 None:intergenic 45.0%
AGGGGTAGACCAAGGAAATA+TGG - chr8.2:63023514-63023533 MS.gene051167:CDS 45.0%
AGGTATCAATCCTGCGGTTA+CGG - chr8.2:63023300-63023319 MS.gene051167:CDS 45.0%
AGTCAGGAAATCAGCAGTGT+TGG - chr8.2:63025703-63025722 MS.gene051167:intron 45.0%
CAAGGAAATATGGGCCAGAT+GGG - chr8.2:63023524-63023543 MS.gene051167:CDS 45.0%
CCCCGAGTTTACAACTTTCT+AGG - chr8.2:63024008-63024027 MS.gene051167:intron 45.0%
CTAACCAAGGAACAAGAAGC+AGG - chr8.2:63026482-63026501 MS.gene051167:intron 45.0%
CTACTTCAGGGTTATGAACC+TGG + chr8.2:63023384-63023403 None:intergenic 45.0%
CTATTTGTCACACCGCTATC+CGG - chr8.2:63026204-63026223 MS.gene051167:intron 45.0%
GAAAGGATGTTTACCTGCAC+AGG + chr8.2:63026592-63026611 None:intergenic 45.0%
GAAATGAATGGGCACTCTGA+TGG - chr8.2:63025037-63025056 MS.gene051167:intron 45.0%
GATTTACTGACGCACCTCAT+AGG + chr8.2:63025355-63025374 None:intergenic 45.0%
GGGGTAGACCAAGGAAATAT+GGG - chr8.2:63023515-63023534 MS.gene051167:CDS 45.0%
GTAAGAATAAAGGACGGGGA+TGG + chr8.2:63025121-63025140 None:intergenic 45.0%
GTGAAGCAAGTGAAACCACA+GGG - chr8.2:63023619-63023638 MS.gene051167:intron 45.0%
TAGTAGTCAATCCCGGATAG+CGG + chr8.2:63026219-63026238 None:intergenic 45.0%
TAGTCAATAGTGGCTGACAG+CGG - chr8.2:63025749-63025768 MS.gene051167:CDS 45.0%
TATGCCGGACACAAGAAAAG+CGG - chr8.2:63027476-63027495 MS.gene051167:CDS 45.0%
TATTTGTCACACCGCTATCC+GGG - chr8.2:63026205-63026224 MS.gene051167:intron 45.0%
TCAGGGTTATGAACCTGGTT+TGG + chr8.2:63023379-63023398 None:intergenic 45.0%
TCCGTCATCCAGATTCTTCT+GGG - chr8.2:63025319-63025338 MS.gene051167:intron 45.0%
TGAAGCAAGTGAAACCACAG+GGG - chr8.2:63023620-63023639 MS.gene051167:intron 45.0%
TGCAATGGCCTGAGTAAATG+TGG + chr8.2:63027295-63027314 None:intergenic 45.0%
TGCATTCAAACATACCTCGC+CGG + chr8.2:63025098-63025117 None:intergenic 45.0%
TGTGAAGCAAGTGAAACCAC+AGG - chr8.2:63023618-63023637 MS.gene051167:intron 45.0%
! AAAGTACCCCCAGAAGAATC+TGG + chr8.2:63025330-63025349 None:intergenic 45.0%
! GGTTTATTTCAGGTGGTGGT+GGG - chr8.2:63027204-63027223 MS.gene051167:CDS 45.0%
! TCAGCACTATTAGTTTGGGG+TGG + chr8.2:63027336-63027355 None:intergenic 45.0%
! TGGTTTATTTCAGGTGGTGG+TGG - chr8.2:63027203-63027222 MS.gene051167:CDS 45.0%
!! TGTTTGTGTCGGTGCTGTAT+AGG + chr8.2:63027029-63027048 None:intergenic 45.0%
!!! ACCTCTTTGAGGGCATTTTG+GGG - chr8.2:63025879-63025898 MS.gene051167:intron 45.0%
AGCATGAGCACACGTGAACT+TGG + chr8.2:63026648-63026667 None:intergenic 50.0%
AGGTGGAATGAGTGTCTCAC+TGG - chr8.2:63026507-63026526 MS.gene051167:intron 50.0%
AGTTCACGTGTGCTCATGCT+CGG - chr8.2:63026648-63026667 MS.gene051167:intron 50.0%
ATCCAAACCTACACTCACCG+GGG + chr8.2:63023476-63023495 None:intergenic 50.0%
ATGGCCTGAGTAAATGTGGC+TGG + chr8.2:63027291-63027310 None:intergenic 50.0%
CACAGGGGATGGAATACAAG+AGG - chr8.2:63023635-63023654 MS.gene051167:intron 50.0%
CATCCAAACCTACACTCACC+GGG + chr8.2:63023477-63023496 None:intergenic 50.0%
CCAAGGAAATATGGGCCAGA+TGG - chr8.2:63023523-63023542 MS.gene051167:CDS 50.0%
CCATCCAAACCTACACTCAC+CGG + chr8.2:63023478-63023497 None:intergenic 50.0%
CCATCTGGCCCATATTTCCT+TGG + chr8.2:63023526-63023545 None:intergenic 50.0%
CCCCAGAAGAATCTGGATGA+CGG + chr8.2:63025323-63025342 None:intergenic 50.0%
CCGTCATCCAGATTCTTCTG+GGG - chr8.2:63025320-63025339 MS.gene051167:intron 50.0%
CGCCTTTCGAAGGGAAAACT+GGG - chr8.2:63027440-63027459 MS.gene051167:CDS 50.0%
CGTCATCCAGATTCTTCTGG+GGG - chr8.2:63025321-63025340 MS.gene051167:intron 50.0%
CTCCGTCATCCAGATTCTTC+TGG - chr8.2:63025318-63025337 MS.gene051167:intron 50.0%
CTCTTGTATTCCATCCCCTG+TGG + chr8.2:63023637-63023656 None:intergenic 50.0%
GATGTTTACCTGCACAGGAG+TGG + chr8.2:63026587-63026606 None:intergenic 50.0%
GCTGAGAAAGAGGATGCCAT+GGG - chr8.2:63027351-63027370 MS.gene051167:CDS 50.0%
GGCGGAGCTGAAGATGAAAT+AGG + chr8.2:63023577-63023596 None:intergenic 50.0%
GGTCAACATGCACTCTATGC+CGG - chr8.2:63027461-63027480 MS.gene051167:CDS 50.0%
TCCCCAAAATGCCCTCAAAG+AGG + chr8.2:63025883-63025902 None:intergenic 50.0%
TGCTGAGAAAGAGGATGCCA+TGG - chr8.2:63027350-63027369 MS.gene051167:CDS 50.0%
! AGGTGCTGCAGATACTGCAA+TGG + chr8.2:63027310-63027329 None:intergenic 50.0%
! CCAGTTTTCCCTTCGAAAGG+CGG + chr8.2:63027442-63027461 None:intergenic 50.0%
! GACCCAGTTTTCCCTTCGAA+AGG + chr8.2:63027445-63027464 None:intergenic 50.0%
! GCACTATTAGTTTGGGGTGG+CGG + chr8.2:63027333-63027352 None:intergenic 50.0%
! TGATACTGTCGGTGTTTCCC+CGG - chr8.2:63023456-63023475 MS.gene051167:CDS 50.0%
! TTCAGATCTTGATGGCCGCT+AGG + chr8.2:63027240-63027259 None:intergenic 50.0%
! TTTTCCCTTCGAAAGGCGGT+GGG + chr8.2:63027438-63027457 None:intergenic 50.0%
!! TGGGGGTACTTTGACCTATG+AGG - chr8.2:63025338-63025357 MS.gene051167:intron 50.0%
!! TTGGTGTCAGACACACGTGT+TGG - chr8.2:63027120-63027139 MS.gene051167:intron 50.0%
!!! GTAGCCGCTTTTCTTGTGTC+CGG + chr8.2:63027483-63027502 None:intergenic 50.0%
AAAGAGGATGCCATGGGTGG+CGG - chr8.2:63027357-63027376 MS.gene051167:CDS 55.0%
ACACCGACAGTATCAGCAGC+AGG + chr8.2:63023451-63023470 None:intergenic 55.0%
AGCAGCAGTAGATCCTCCTG+CGG + chr8.2:63023419-63023438 None:intergenic 55.0%
AGCGGTGCGGAACCAAATAG+CGG - chr8.2:63025798-63025817 MS.gene051167:intron 55.0%
CAAGGAACAAGAAGCAGGGC+AGG - chr8.2:63026487-63026506 MS.gene051167:intron 55.0%
CAGCTGAAGCAGCCGCTATT+TGG + chr8.2:63025813-63025832 None:intergenic 55.0%
CCGCCTTTCGAAGGGAAAAC+TGG - chr8.2:63027439-63027458 MS.gene051167:CDS 55.0%
CCGGTGAGTGTAGGTTTGGA+TGG - chr8.2:63023475-63023494 MS.gene051167:CDS 55.0%
CGCTACGGTAATCGTCCTAG+CGG - chr8.2:63025780-63025799 MS.gene051167:intron 55.0%
CGCTAGGACGATTACCGTAG+CGG + chr8.2:63025782-63025801 None:intergenic 55.0%
CTGCAGCTGTGGCTACTTCA+GGG + chr8.2:63023396-63023415 None:intergenic 55.0%
CTGCCCTGCTTCTTGTTCCT+TGG + chr8.2:63026489-63026508 None:intergenic 55.0%
GAGAAAGAGGATGCCATGGG+TGG - chr8.2:63027354-63027373 MS.gene051167:CDS 55.0%
GCAAGTGAAACCACAGGGGA+TGG - chr8.2:63023624-63023643 MS.gene051167:intron 55.0%
GCTCCTGCTGCTGATACTGT+CGG - chr8.2:63023445-63023464 MS.gene051167:CDS 55.0%
GGCATGTTGACAGACCCATC+TGG + chr8.2:63023541-63023560 None:intergenic 55.0%
GTGGGAAGCTTTCTGCCTAG+CGG - chr8.2:63027222-63027241 MS.gene051167:CDS 55.0%
TATAGCTGCCACTCCTGTGC+AGG - chr8.2:63026576-63026595 MS.gene051167:intron 55.0%
TGATACGCGGATGGAGCTTC+TGG + chr8.2:63023334-63023353 None:intergenic 55.0%
TTCCCCGGTGAGTGTAGGTT+TGG - chr8.2:63023471-63023490 MS.gene051167:CDS 55.0%
! CCTTGGTGCGACATGATACG+CGG + chr8.2:63023347-63023366 None:intergenic 55.0%
! CTATTAGTTTGGGGTGGCGG+AGG + chr8.2:63027330-63027349 None:intergenic 55.0%
! CTATTTGGTTCCGCACCGCT+AGG + chr8.2:63025798-63025817 None:intergenic 55.0%
! GTTTTCCCTTCGAAAGGCGG+TGG + chr8.2:63027439-63027458 None:intergenic 55.0%
AGCCCTGATGGTCGCGTAGT+AGG - chr8.2:63026532-63026551 MS.gene051167:intron 60.0%
ATAGTGGCTGACAGCGGCGA+CGG - chr8.2:63025755-63025774 MS.gene051167:CDS 60.0%
CATCACTGTCAATGCCGGCG+AGG - chr8.2:63025081-63025100 MS.gene051167:intron 60.0%
CCGCGTATCATGTCGCACCA+AGG - chr8.2:63023344-63023363 MS.gene051167:CDS 60.0%
CCTGATGGTCGCGTAGTAGG+CGG - chr8.2:63026535-63026554 MS.gene051167:intron 60.0%
CGCCTACTACGCGACCATCA+GGG + chr8.2:63026537-63026556 None:intergenic 60.0%
CGGTAATCGTCCTAGCGGTG+CGG - chr8.2:63025785-63025804 MS.gene051167:intron 60.0%
GCTGCAGCTGTGGCTACTTC+AGG + chr8.2:63023397-63023416 None:intergenic 60.0%
GGAACAAGAAGCAGGGCAGG+TGG - chr8.2:63026490-63026509 MS.gene051167:intron 60.0%
GGTGCGACATGATACGCGGA+TGG + chr8.2:63023343-63023362 None:intergenic 60.0%
GGTGTTTCCCCGGTGAGTGT+AGG - chr8.2:63023466-63023485 MS.gene051167:CDS 60.0%
GTAGTAGGCGGTGGAGTTGC+TGG - chr8.2:63026547-63026566 MS.gene051167:intron 60.0%
GTATCAGCAGCAGGAGCAGC+AGG + chr8.2:63023442-63023461 None:intergenic 60.0%
GTCTCACTGGCAAGCCCTGA+TGG - chr8.2:63026520-63026539 MS.gene051167:intron 60.0%
TACATGTCCACCGCCACCCA+TGG + chr8.2:63027370-63027389 None:intergenic 60.0%
TCCACCCACCGCCTTTCGAA+GGG - chr8.2:63027431-63027450 MS.gene051167:CDS 60.0%
CCGCCTACTACGCGACCATC+AGG + chr8.2:63026538-63026557 None:intergenic 65.0%
CTCCACCCACCGCCTTTCGA+AGG - chr8.2:63027430-63027449 MS.gene051167:CDS 65.0%
CTTCGAAAGGCGGTGGGTGG+AGG + chr8.2:63027432-63027451 None:intergenic 65.0%
GATGGTCGCGTAGTAGGCGG+TGG - chr8.2:63026538-63026557 MS.gene051167:intron 65.0%
GGCGCTATCACCGTAACCGC+AGG + chr8.2:63023313-63023332 None:intergenic 65.0%
TCCCTTCGAAAGGCGGTGGG+TGG + chr8.2:63027435-63027454 None:intergenic 65.0%
ACAGCGGCGACGGACCGCTA+CGG - chr8.2:63025765-63025784 MS.gene051167:CDS 70.0%
GTAGCCACAGCTGCAGCCGC+AGG - chr8.2:63023400-63023419 MS.gene051167:CDS 70.0%
TCCTCCTGCGGCTGCAGCTG+TGG + chr8.2:63023407-63023426 None:intergenic 70.0%
! GAGGATGCCATGGGTGGCGG+TGG - chr8.2:63027360-63027379 MS.gene051167:CDS 70.0%
GCCACAGCTGCAGCCGCAGG+AGG - chr8.2:63023403-63023422 MS.gene051167:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 63023286 63027533 63023286 ID=MS.gene051167
chr8.2 mRNA 63023286 63027533 63023286 ID=MS.gene051167.t1;Parent=MS.gene051167
chr8.2 exon 63027134 63027533 63027134 ID=MS.gene051167.t1.exon1;Parent=MS.gene051167.t1
chr8.2 CDS 63027134 63027533 63027134 ID=cds.MS.gene051167.t1;Parent=MS.gene051167.t1
chr8.2 exon 63025717 63025784 63025717 ID=MS.gene051167.t1.exon2;Parent=MS.gene051167.t1
chr8.2 CDS 63025717 63025784 63025717 ID=cds.MS.gene051167.t1;Parent=MS.gene051167.t1
chr8.2 exon 63025460 63025591 63025460 ID=MS.gene051167.t1.exon3;Parent=MS.gene051167.t1
chr8.2 CDS 63025460 63025591 63025460 ID=cds.MS.gene051167.t1;Parent=MS.gene051167.t1
chr8.2 exon 63024222 63024386 63024222 ID=MS.gene051167.t1.exon4;Parent=MS.gene051167.t1
chr8.2 CDS 63024222 63024386 63024222 ID=cds.MS.gene051167.t1;Parent=MS.gene051167.t1
chr8.2 exon 63023286 63023603 63023286 ID=MS.gene051167.t1.exon5;Parent=MS.gene051167.t1
chr8.2 CDS 63023286 63023603 63023286 ID=cds.MS.gene051167.t1;Parent=MS.gene051167.t1
Gene Sequence

>MS.gene051167

ATGGAAGGAAGAGAAGGTATCAATCCTGCGGTTACGGTGATAGCGCCAGAAGCTCCATCCGCGTATCATGTCGCACCAAGGAATGAAGTTCCAAACCAGGTTCATAACCCTGAAGTAGCCACAGCTGCAGCCGCAGGAGGATCTACTGCTGCTCCTGCTGCTCCTGCTGCTGATACTGTCGGTGTTTCCCCGGTGAGTGTAGGTTTGGATGGAACCGTTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGGCCAGATGGGTCTGTCAACATGCCATTGTCACCATTGCCTATTTCATCTTCAGCTCCGCCTTCTTCTAAAGACTTCTCATCTGTGAAGCAAGTGAAACCACAGGGGATGGAATACAAGAGGGCGAAAAAATTTGTGATGGATCATCTAGGTAATTGTTGGTCCTTTATACATTGATTTAATGCTCTTGTTGGTTGGTAAATATTATAGTTAATCATATGACTTTCATTTTGTATGTAACCTTTTTCCTTTTGTTGATGTTTGAAGTGTATCTCTGTCTGGTATCAAAAATACTTTGCTTCTCTTGCTTTTTTGAGTTTGCATGCTATTTTACTTCCGAACTACTTTCCTTCAATCCACAACAAAGCTCTCAAATTTGTTTTTATACAGCTTATTTATGACTTCTGTAAGAATTAATTAAATCTGTCCATATTCCTTTAATTGTAAAACTTCATAGTGTGCTTGTTAATATTCCCCGAGTTTACAACTTTCTAGGTTAGTGCTAATGAATTACGCATTCAATGTATTTATTGTACACCATTATAAATACAAGTTGTGTAGATACAAAGAATTTACAGAAATTTCAACTTTATAGATTTTATTGCTTACTTTCTGATTTTCAAATGAATTCAAAAACATCTTTTGTTTGTATTTCTGTAAGAATTAATTAATTCCGCTATTGGGTCAAAAGATGTCTTTTTTTGTCAAGTTTAATTAATTCTTACGGAAATACAAACAAAAGATATTTCTGAATTCATTTGAAAATCAGAAAGTAAACACTAAATTCTATAAAGTTGTAGTTTAAGTAAATTCTATGTATCAAGGCAACTTGTATTTATAATGGTGTACAATAAATACATTGAATGCGTACTCCCTCTGTTACTGTTTAAAAGCAAAAGTCACCATTTCACACTTATTAAGGTATGCCGTTGCTTATATTAATTTCAGTATAAAAACATAATTGCTCTACCCATAATGCCCTCATTGTAATTTGTAAAGAATTACGTTTTAATTTGTAAAGAATTACAATGAGGGTAGTTTGGCTAAAGCAATTATGTTTTTGACTGAAATTAATATAAGCAAAGGCCGATACCTTAATAAGCGCGAAATGGTGACTTTTGTTTATAAACAGTAACGGAGGGAGTACACATTCAATGTATTTATTGTACACCATTATAAAAACAAGTTGTGTAGATACAAAGAATTTACAGAAATTACGACATTTCGCAAATTACAATGAGGGTATTTTGGGTAAAGCAATTATGTTTTTTTACTGAAATTAATATAAGCAACGGCATACCTTAACAAGTGTGAAATGGTGACTTTTGCTTTTAAACAGTAGCGGAGGGAGTATGCATTCAATGTATTCATTGTACACCATTATAAATACAAGTTGCCTTGATACATAGAATTTACTTAAACTACAACTTTATAGAATTTAGTGTTTACTTTCTGATTTTCAAATGAATTCAGAAATATTTTTTGTTGGTACTTTTGCAGGTGAAATGAATGGGCACTCTGATGGTACAAACTTTATGCCGCATTTCATCACTGTCAATGCCGGCGAGGTATGTTTGAATGCACCATCCCCGTCCTTTATTCTTACCTTCCTAAGCGTTATACAAATTGATGATACCATTACTTCCAAAGTTATAATGAATAATATTATCTTGCTATACTCTTTGGTTTGTAGGATATTACAAATAAGGTGATATCATTTTCACAACAAGGGCCGCGAGCAATATGTGTCTTATCGGCTACTGGAGTGATTTCAAATGTGACTCTCCGTCATCCAGATTCTTCTGGGGGTACTTTGACCTATGAGGTGCGTCAGTAAATCATGACACTGACTTATTTTTATTTTATTCCATGCTTAAAGCCTAAATTCATTTGAAGCTTCTGTTTAACACTTTGTTCTGTTTTATGTAAAGTATGGATCTAAGGTTTAGGTATTGCAATAATCATCGGATTGATAATATTTATAATCAGGACTGAAAAATTGAAATATTATTAATGATGTTTTTTGTTTATATGAGAATGGTTTTATAAACATTTTTCTGTTCAGTAAATTAATCAAGATGGTGAGAAGCATATGGTTTTCAATGATTTTGTAAATTAATCAAGATGGTTTTATGAACATTTTTCTGTACAATTCTACTAATGTATTGAGTCAGGAAATCAGCAGTGTTGGTAGTTGATATGTTATATGTTCAGTAGTCAATAGTGGCTGACAGCGGCGACGGACCGCTACGGTAATCGTCCTAGCGGTGCGGAACCAAATAGCGGCTGCTTCAGCTGCTATTTGATTTTAGTAGGAAATTTCCAAATTGACCGTATTTTGAAAACCTCTTTGAGGGCATTTTGGGGATTCTGTAAACCCTAACATTGCTTGATGGTTTCTCTCTGTTTTTTTTTTCTTCCTCTGTTGTATGGTTTCTCGGTTCTTTTTTTCTTCCTGTTTTCTTTTGTTTTATGGTTTATCTTGTTTTATGATTTTCTTGTTTGTTCCTGTTTTTTGTTTTTTGGTGTTTTGATTTTTGACTGTTTCATGAGAGTGTTATATTTAATTTTATATAAGTTATTTGTTTTGAGAAATATACAAGTTTGTTTATAATTTAACAGTATTATTCATGTAATTTGTCCAAAACATAATCAAATATCGGTGACTGCTATTTGTCACACCGCTATCCGGGATTGACTACTATTATGTTGTTACTAGTAGTTGAAATGACTTTCACAAAAGTCTGATTTTGCCATAGTCTGAGCTGATATTTGATGGTTATTTTCTTAAGTCCGCTATTGAGTTTGGAACTGTAGTTTTTCTGAATGTTGATGTATTGATATTGGTGCCACAGTATCTTCTGTTTAATATTTCTTCTTCTAAATATGCTCTTGCAGGGTCGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGATACTAACCAAGGAACAAGAAGCAGGGCAGGTGGAATGAGTGTCTCACTGGCAAGCCCTGATGGTCGCGTAGTAGGCGGTGGAGTTGCTGGTGTTCTTATAGCTGCCACTCCTGTGCAGGTAAACATCCTTTCACTCTTTACACTTGGGTCATGTTTAACAATGCACCAAGTTCACGTGTGCTCATGCTCGGAAAGTGAACCACCATTTCCCCTTAATATAGTTGCCAAACAAATAGGATTGAGAATTGAGAAGTGACTATTTTAACGTCTATTTGCTTTGAGACATCTGTTTTCACTTTTAATTACAAAATTGCTACATTGTTTTCATTTTTCATCTCCTTTCCAAATATTTCACTGTTTCCTATACAAATCTTTGTAAACAGAAAGCAAATTGAAAACAATGCGACAGTTTTGTAATTAAAAGTGAAAAGTCAATAAAAATAGAAAATGTCTTCTCATACTAAATAGGCCCTAAACTTGCAATTCTATGTCTCAACAATTGCACTAGAGATCGTTTTTGTGTAAGTAGGCCAAGTTAACATGATTCCTATACAGCACCGACACAAACATGAACACTGTACATGGCTCTGACACGTGTAATAATTTGAGAAAATGAAATAATTAAATTCAATCACATGTGTTGGTGTCAGACACACGTGTTGGATGTGCCTTCAATCCTAAGTGTTGCATCTTCCTCAAAAGAAGGATCACTTATATTTTTCTTGGTTTATTTCAGGTGGTGGTGGGAAGCTTTCTGCCTAGCGGCCATCAAGATCTGAAAACAAGGAAGCCTAAGTCTGATTATGCACCAGCCACATTTACTCAGGCCATTGCAGTATCTGCAGCACCTCCGCCACCCCAAACTAATAGTGCTGAGAAAGAGGATGCCATGGGTGGCGGTGGACATGTACTGCAAAATTCTGGAACCCTTAACTCAAATTTCACTTCTCCTCCACCCACCGCCTTTCGAAGGGAAAACTGGGTCAACATGCACTCTATGCCGGACACAAGAAAAGCGGCTACTGATATTAACATATCTTTGCCTGATAATTAA

Protein sequence

>MS.gene051167.t1

MEGREGINPAVTVIAPEAPSAYHVAPRNEVPNQVHNPEVATAAAAGGSTAAPAAPAADTVGVSPVSVGLDGTVKKKRGRPRKYGPDGSVNMPLSPLPISSSAPPSSKDFSSVKQVKPQGMEYKRAKKFVMDHLGEMNGHSDGTNFMPHFITVNAGEDITNKVISFSQQGPRAICVLSATGVISNVTLRHPDSSGGTLTYEGRFEILSLSGSFMPTDTNQGTRSRAGGMSVSLASPDGRVVGGGVAGVLIAATPVQVVVGSFLPSGHQDLKTRKPKSDYAPATFTQAIAVSAAPPPPQTNSAEKEDAMGGGGHVLQNSGTLNSNFTSPPPTAFRRENWVNMHSMPDTRKAATDINISLPDN