Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82139.t1 | XP_003612558.1 | 96.7 | 366 | 12 | 0 | 1 | 366 | 1 | 366 | 1.60E-193 | 685.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82139.t1 | Q9C865 | 46.0 | 435 | 164 | 4 | 1 | 366 | 1 | 433 | 1.3e-95 | 351.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82139.t1 | G7K5G6 | 96.7 | 366 | 12 | 0 | 1 | 366 | 1 | 366 | 1.2e-193 | 685.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene82139 | 0.81089 | 9.21E-51 | -1.69E-46 |
| MS.gene049368 | MS.gene82139 | 0.833967 | 3.93E-56 | -1.69E-46 |
| MS.gene049499 | MS.gene82139 | 0.800885 | 1.17E-48 | -1.69E-46 |
| MS.gene049711 | MS.gene82139 | 0.857884 | 1.20E-62 | -1.69E-46 |
| MS.gene049824 | MS.gene82139 | 0.81798 | 2.49E-52 | -1.69E-46 |
| MS.gene050559 | MS.gene82139 | 0.82265 | 2.11E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene82139 | 0.811942 | 5.44E-51 | -1.69E-46 |
| MS.gene050562 | MS.gene82139 | 0.812938 | 3.30E-51 | -1.69E-46 |
| MS.gene050945 | MS.gene82139 | 0.805929 | 1.05E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene82139 | 0.807377 | 5.21E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene82139 | 0.820695 | 5.99E-53 | -1.69E-46 |
| MS.gene051676 | MS.gene82139 | 0.811108 | 8.25E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene82139 | 0.807442 | 5.05E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene82139 | 0.804059 | 2.59E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene82139 | 0.814886 | 1.23E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene82139 | 0.826251 | 3.01E-54 | -1.69E-46 |
| MS.gene052307 | MS.gene82139 | 0.810531 | 1.10E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene82139 | 0.801542 | 8.57E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene82139 | 0.819116 | 1.38E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene82139 | 0.810806 | 9.60E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene82139 | 0.810012 | 1.42E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene82139 | 0.822255 | 2.61E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene82139 | 0.818779 | 1.64E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene82139 | 0.81123 | 7.77E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene82139 | 0.850886 | 1.27E-60 | -1.69E-46 |
| MS.gene057102 | MS.gene82139 | 0.852334 | 4.94E-61 | -1.69E-46 |
| MS.gene058008 | MS.gene82139 | 0.802711 | 4.93E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene82139 | 0.806358 | 8.55E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene82139 | 0.816303 | 5.93E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene82139 | -0.813201 | 2.89E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene82139 | 0.809292 | 2.03E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene82139 | 0.835017 | 2.14E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene82139 | 0.851802 | 7.00E-61 | -1.69E-46 |
| MS.gene060937 | MS.gene82139 | 0.857019 | 2.17E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene82139 | 0.822874 | 1.88E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82139.t1 | MTR_5g026400 | 96.721 | 366 | 12 | 0 | 1 | 366 | 1 | 366 | 0.0 | 735 |
| MS.gene82139.t1 | MTR_5g026400 | 96.542 | 347 | 12 | 0 | 20 | 366 | 18 | 364 | 0.0 | 697 |
| MS.gene82139.t1 | MTR_5g026400 | 95.170 | 352 | 12 | 1 | 20 | 366 | 18 | 369 | 0.0 | 691 |
| MS.gene82139.t1 | MTR_5g026400 | 96.104 | 308 | 12 | 0 | 1 | 308 | 1 | 308 | 0.0 | 608 |
| MS.gene82139.t1 | MTR_5g026400 | 95.848 | 289 | 12 | 0 | 20 | 308 | 18 | 306 | 0.0 | 572 |
| MS.gene82139.t1 | MTR_3g117350 | 49.340 | 379 | 169 | 7 | 1 | 366 | 1 | 369 | 9.12e-111 | 328 |
| MS.gene82139.t1 | MTR_4g071540 | 47.644 | 382 | 172 | 8 | 1 | 366 | 1 | 370 | 2.88e-103 | 309 |
| MS.gene82139.t1 | MTR_8g087990 | 38.692 | 367 | 198 | 5 | 1 | 364 | 1 | 343 | 7.91e-87 | 266 |
| MS.gene82139.t1 | MTR_4g071540 | 47.059 | 323 | 143 | 8 | 1 | 307 | 1 | 311 | 6.25e-75 | 236 |
| MS.gene82139.t1 | MTR_8g087990 | 33.787 | 367 | 182 | 6 | 1 | 364 | 1 | 309 | 2.50e-65 | 210 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82139.t1 | AT4G34660 | 47.872 | 376 | 176 | 6 | 1 | 366 | 1 | 366 | 2.03e-112 | 332 |
| MS.gene82139.t1 | AT4G34660 | 46.011 | 376 | 160 | 7 | 1 | 366 | 1 | 343 | 2.16e-103 | 308 |
| MS.gene82139.t1 | AT4G34660 | 44.536 | 366 | 152 | 2 | 1 | 366 | 1 | 315 | 1.97e-100 | 300 |
| MS.gene82139.t1 | AT1G31440 | 50.836 | 299 | 135 | 3 | 1 | 289 | 1 | 297 | 2.99e-95 | 291 |
| MS.gene82139.t1 | AT1G31440 | 57.009 | 107 | 42 | 1 | 264 | 366 | 327 | 433 | 4.03e-33 | 128 |
| MS.gene82139.t1 | AT4G18060 | 41.047 | 363 | 190 | 5 | 1 | 360 | 1 | 342 | 4.68e-95 | 287 |
| MS.gene82139.t1 | AT4G39020 | 45.055 | 91 | 49 | 1 | 276 | 366 | 78 | 167 | 1.11e-18 | 82.8 |
Find 86 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTAACTTTCTCATTTGC+AGG | 0.288088 | 5.2:+17045917 | None:intergenic |
| GAGACTTTGCTTGGGATCTT+AGG | 0.291927 | 5.2:-17047991 | MS.gene82139:CDS |
| GGTTGATTATGTTCCTCTTT+TGG | 0.303218 | 5.2:+17045938 | None:intergenic |
| CGGTAACTCATACGATATAT+TGG | 0.313275 | 5.2:-17048025 | MS.gene82139:CDS |
| GCTAAGGACTGTTGTAAGTA+TGG | 0.317953 | 5.2:-17048105 | MS.gene82139:CDS |
| GCATAACTTTGATGTTATTC+CGG | 0.330937 | 5.2:+17044860 | None:intergenic |
| ACAAATAACAGGAGCTCCTT+TGG | 0.378574 | 5.2:-17047413 | MS.gene82139:CDS |
| GCTTGGGATCTTAGGTGATC+AGG | 0.383065 | 5.2:-17047983 | MS.gene82139:intron |
| TGTTTATAACGAATGCCATT+TGG | 0.388959 | 5.2:+17045896 | None:intergenic |
| CCTTCAGCTTGAGCATCAAA+TGG | 0.399054 | 5.2:+17045339 | None:intergenic |
| CCACTGCGGGCACAAATAAC+AGG | 0.404350 | 5.2:-17047424 | MS.gene82139:CDS |
| GATCACTACCTGTTGTTGTT+TGG | 0.414946 | 5.2:+17049367 | None:intergenic |
| GCAAGTGCTTCTCTTCAATT+CGG | 0.418266 | 5.2:-17048045 | MS.gene82139:CDS |
| GGAGAATTCAATGGCAATGC+TGG | 0.418558 | 5.2:-17044938 | MS.gene82139:CDS |
| TATAAACATAACACCCAAAT+GGG | 0.436203 | 5.2:-17045881 | MS.gene82139:CDS |
| CGATTATGTTGTAGTCCGTC+AGG | 0.438244 | 5.2:-17045295 | MS.gene82139:intron |
| TTCTGCATTCTGAAGCCTCA+TGG | 0.443561 | 5.2:+17047192 | None:intergenic |
| TTATAAACATAACACCCAAA+TGG | 0.448386 | 5.2:-17045882 | MS.gene82139:CDS |
| CATATCGTTCGGGGCGTTGA+AGG | 0.452090 | 5.2:-17048264 | MS.gene82139:CDS |
| TTCTGTTAGTTCCAAGCAGA+TGG | 0.454303 | 5.2:-17048235 | MS.gene82139:CDS |
| AATGAGAAAGTTAATCCAAA+TGG | 0.467279 | 5.2:-17045911 | MS.gene82139:CDS |
| ATCATTTCCACTGCCAAAAG+AGG | 0.468115 | 5.2:-17045951 | MS.gene82139:CDS |
| CAGTCTATACTTAGACAGTT+GGG | 0.468435 | 5.2:-17048484 | MS.gene82139:CDS |
| ATACCATTGTAGAAAGGCTC+TGG | 0.470481 | 5.2:+17047071 | None:intergenic |
| AGTTCCAAGCAGATGGAGAT+AGG | 0.472353 | 5.2:-17048228 | MS.gene82139:intron |
| GGAAGCAAGCTAGTAGATTG+AGG | 0.473119 | 5.2:-17049400 | MS.gene82139:CDS |
| AATGAAAGGGAGACTTTGCT+TGG | 0.475575 | 5.2:-17048000 | MS.gene82139:CDS |
| ACAAGTTGCCAAACAACAAC+AGG | 0.480217 | 5.2:-17049375 | MS.gene82139:intron |
| TATTCCGGTATCTTGTTCGC+TGG | 0.489472 | 5.2:+17044875 | None:intergenic |
| GCAGTCTATACTTAGACAGT+TGG | 0.490454 | 5.2:-17048485 | MS.gene82139:intron |
| AAACTTCGTCAAGAAGTAGA+AGG | 0.493785 | 5.2:-17047358 | MS.gene82139:CDS |
| GAGGCGTCGATCAAAGTTGA+GGG | 0.496376 | 5.2:-17047239 | MS.gene82139:CDS |
| AATTTCCAGGTTGCTGCCAA+TGG | 0.498806 | 5.2:-17044971 | MS.gene82139:intron |
| GTCACCTATCTCCATCTGCT+TGG | 0.502296 | 5.2:+17048224 | None:intergenic |
| GACGAAGTTTGTCGTAGTTG+TGG | 0.502788 | 5.2:+17047371 | None:intergenic |
| TGAGCGGTTCATTGCTAAGT+TGG | 0.503839 | 5.2:+17048461 | None:intergenic |
| ACGATATATTGGAAAATGAA+AGG | 0.504543 | 5.2:-17048014 | MS.gene82139:CDS |
| ACGAAGTTTGTCGTAGTTGT+GGG | 0.505034 | 5.2:+17047372 | None:intergenic |
| CCATTTGATGCTCAAGCTGA+AGG | 0.507026 | 5.2:-17045339 | MS.gene82139:CDS |
| TTAGCTATACCATTGTAGAA+AGG | 0.507899 | 5.2:+17047065 | None:intergenic |
| TCGTCAAGAAGTAGAAGGCC+AGG | 0.512767 | 5.2:-17047353 | MS.gene82139:intron |
| ATGAAAGGGAGACTTTGCTT+GGG | 0.515856 | 5.2:-17047999 | MS.gene82139:CDS |
| CGATATATTGGAAAATGAAA+GGG | 0.517703 | 5.2:-17048013 | MS.gene82139:CDS |
| GAAGCAAGCTAGTAGATTGA+GGG | 0.520089 | 5.2:-17049399 | MS.gene82139:CDS |
| AAATATGCCCTTGTGGCACT+TGG | 0.522731 | 5.2:-17047151 | MS.gene82139:CDS |
| CTTCAGCTTGAGCATCAAAT+GGG | 0.528750 | 5.2:+17045340 | None:intergenic |
| TCCAGGTTGCTGCCAATGGA+TGG | 0.529779 | 5.2:-17044967 | MS.gene82139:intron |
| ACTTAGCAATGAACCGCTCA+TGG | 0.537092 | 5.2:-17048458 | MS.gene82139:CDS |
| TTGAAGAGAAGCACTTGCAA+GGG | 0.540806 | 5.2:+17048050 | None:intergenic |
| CTCTGCTTATGTACAGAGAC+AGG | 0.541764 | 5.2:-17044906 | MS.gene82139:CDS |
| TGCTGCTATGTCGTCAGTTG+AGG | 0.543649 | 5.2:-17047116 | MS.gene82139:CDS |
| CTAAGGACTGTTGTAAGTAT+GGG | 0.544371 | 5.2:-17048104 | MS.gene82139:CDS |
| GTATACTTCAGTGAGGAAGT+TGG | 0.546550 | 5.2:-17048127 | MS.gene82139:intron |
| ATTGAAGAGAAGCACTTGCA+AGG | 0.556652 | 5.2:+17048049 | None:intergenic |
| ATAGATCTCTGAGCCACTGC+GGG | 0.558173 | 5.2:-17047437 | MS.gene82139:intron |
| TTCAGTGAGGAAGTTGGCTA+AGG | 0.558875 | 5.2:-17048121 | MS.gene82139:intron |
| TTCTCCTTCAGACCATCCAT+TGG | 0.561878 | 5.2:+17044955 | None:intergenic |
| TGTCGTAGTTGTGGGTGAGA+TGG | 0.569642 | 5.2:+17047380 | None:intergenic |
| TGAGGCGTCGATCAAAGTTG+AGG | 0.570936 | 5.2:-17047240 | MS.gene82139:CDS |
| CATTTGATGCTCAAGCTGAA+GGG | 0.575493 | 5.2:-17045338 | MS.gene82139:CDS |
| CTAGAATAACAAGGGCATGC+CGG | 0.575931 | 5.2:+17046191 | None:intergenic |
| CTTCTCTACCAAGTGCCACA+AGG | 0.578531 | 5.2:+17047143 | None:intergenic |
| TTTCAGCGGCATATCGTTCG+GGG | 0.580469 | 5.2:-17048273 | MS.gene82139:CDS |
| TGGTCTGAAGGAGAATTCAA+TGG | 0.582228 | 5.2:-17044947 | MS.gene82139:CDS |
| AATTCAATGGCAATGCTGGA+TGG | 0.583292 | 5.2:-17044934 | MS.gene82139:CDS |
| ATTTGATGCTCAAGCTGAAG+GGG | 0.584498 | 5.2:-17045337 | MS.gene82139:CDS |
| CACTTCTACAAAGACTGCTA+AGG | 0.584795 | 5.2:-17048389 | MS.gene82139:intron |
| AGTACCAGCGAACAAGATAC+CGG | 0.589399 | 5.2:-17044879 | MS.gene82139:CDS |
| GCTGCCAATGGATGGTCTGA+AGG | 0.596789 | 5.2:-17044959 | MS.gene82139:CDS |
| TCTAGATAAACTACATGCTG+AGG | 0.597051 | 5.2:-17046173 | MS.gene82139:intron |
| TCTCCAGAGCCTTTCTACAA+TGG | 0.606321 | 5.2:-17047074 | MS.gene82139:intron |
| CCTGTTATTTGTGCCCGCAG+TGG | 0.612434 | 5.2:+17047424 | None:intergenic |
| TTCTCTACCAAGTGCCACAA+GGG | 0.615566 | 5.2:+17047144 | None:intergenic |
| AGATGGCGTGCATCTTCCAA+AGG | 0.624501 | 5.2:+17047397 | None:intergenic |
| CTGTCTCTGTACATAAGCAG+AGG | 0.628802 | 5.2:+17044907 | None:intergenic |
| TGAAGAGAAGCACTTGCAAG+GGG | 0.649136 | 5.2:+17048051 | None:intergenic |
| TCAGATTCATCAGCCATGAG+CGG | 0.654677 | 5.2:+17048445 | None:intergenic |
| GTAGTTTATCTAGAATAACA+AGG | 0.660690 | 5.2:+17046182 | None:intergenic |
| TGTCTCTGTACATAAGCAGA+GGG | 0.668894 | 5.2:+17044908 | None:intergenic |
| AGAGCATAAATATGCCCTTG+TGG | 0.671354 | 5.2:-17047158 | MS.gene82139:CDS |
| GGAAATGATGTAGAGTCTTG+TGG | 0.677018 | 5.2:+17045965 | None:intergenic |
| TAGTTTATCTAGAATAACAA+GGG | 0.682515 | 5.2:+17046183 | None:intergenic |
| TTTCTGCAGAGAGTTCCATG+AGG | 0.703430 | 5.2:-17047207 | MS.gene82139:CDS |
| TATAGATCTCTGAGCCACTG+CGG | 0.729508 | 5.2:-17047438 | MS.gene82139:intron |
| GAAGAGAAGCACTTGCAAGG+GGG | 0.737031 | 5.2:+17048052 | None:intergenic |
| GGGACTGAGAATGACAACCA+AGG | 0.745093 | 5.2:-17048084 | MS.gene82139:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATTAACAAAGTAAAA+TGG | + | chr5.2:17047526-17047545 | None:intergenic | 10.0% |
| !! | AATATCATTATTAATATTTG+CGG | - | chr5.2:17049214-17049233 | MS.gene82139:intron | 10.0% |
| !!! | AAAATAATTTTTTTTTGGTT+TGG | + | chr5.2:17048022-17048041 | None:intergenic | 10.0% |
| !!! | AAATAATTTTTTTTTGGTTT+GGG | + | chr5.2:17048021-17048040 | None:intergenic | 10.0% |
| !!! | AAATTCATAATTTTTTAATG+AGG | - | chr5.2:17047908-17047927 | MS.gene82139:intron | 10.0% |
| !!! | AATTAAATCAAAATCAATTT+TGG | - | chr5.2:17045305-17045324 | MS.gene82139:CDS | 10.0% |
| !!! | ATTTTATTGCTTATATAAAT+TGG | + | chr5.2:17048686-17048705 | None:intergenic | 10.0% |
| !! | TATCTAATTAAATGTTTGTT+TGG | - | chr5.2:17047931-17047950 | MS.gene82139:intron | 15.0% |
| !!! | AATAATTTTTTTTTGGTTTG+GGG | + | chr5.2:17048020-17048039 | None:intergenic | 15.0% |
| !!! | GATTTTGATTTAATTGATTT+TGG | + | chr5.2:17045300-17045319 | None:intergenic | 15.0% |
| !!! | GGTGAAAAATAATTTTTTTT+TGG | + | chr5.2:17048027-17048046 | None:intergenic | 15.0% |
| !!! | TATTGACTTTGATAAATTAA+GGG | - | chr5.2:17046646-17046665 | MS.gene82139:intron | 15.0% |
| !!! | TGATAACATCATATATTTTA+CGG | + | chr5.2:17046409-17046428 | None:intergenic | 15.0% |
| !! | AGATCAACATTAAAAAGAAA+TGG | + | chr5.2:17048612-17048631 | None:intergenic | 20.0% |
| !! | CTTAATAACTAACTGATAAA+TGG | + | chr5.2:17045942-17045961 | None:intergenic | 20.0% |
| !! | TCATAAAATAAGACAAATCT+TGG | - | chr5.2:17048800-17048819 | MS.gene82139:intron | 20.0% |
| !! | TTCCAATTTGAAAGAATTAT+TGG | + | chr5.2:17048155-17048174 | None:intergenic | 20.0% |
| !! | TTGAAGATGTAAATATTTGT+TGG | - | chr5.2:17047616-17047635 | MS.gene82139:intron | 20.0% |
| !!! | ATAATTTTTTTTTGGTTTGG+GGG | + | chr5.2:17048019-17048038 | None:intergenic | 20.0% |
| !!! | ATATACTGTTGATTTTGTAA+AGG | - | chr5.2:17046727-17046746 | MS.gene82139:intron | 20.0% |
| !!! | CTATTGACTTTGATAAATTA+AGG | - | chr5.2:17046645-17046664 | MS.gene82139:intron | 20.0% |
| !!! | TAGTTTATCTAGAATAACAA+GGG | + | chr5.2:17048107-17048126 | None:intergenic | 20.0% |
| !!! | TATACTGTTGATTTTGTAAA+GGG | - | chr5.2:17046728-17046747 | MS.gene82139:intron | 20.0% |
| !!! | TGATTCTATAAAGTTGATTT+GGG | + | chr5.2:17045578-17045597 | None:intergenic | 20.0% |
| !!! | TTGAACTTCTTAAGTAATTT+TGG | - | chr5.2:17049048-17049067 | MS.gene82139:intron | 20.0% |
| !!! | TTGATTCTATAAAGTTGATT+TGG | + | chr5.2:17045579-17045598 | None:intergenic | 20.0% |
| !!! | TTGCATTTTTATTTTCCTTT+TGG | - | chr5.2:17049287-17049306 | MS.gene82139:intron | 20.0% |
| ! | AAACAAGCTTATTGTATGTT+TGG | - | chr5.2:17045037-17045056 | MS.gene82139:intron | 25.0% |
| ! | AAATCAACAGTAACTCTATT+TGG | + | chr5.2:17049126-17049145 | None:intergenic | 25.0% |
| ! | AATGAGAAAGTTAATCCAAA+TGG | - | chr5.2:17048376-17048395 | MS.gene82139:intron | 25.0% |
| ! | ACAAAACATCAATCAATTAC+TGG | + | chr5.2:17046137-17046156 | None:intergenic | 25.0% |
| ! | ACGATATATTGGAAAATGAA+AGG | - | chr5.2:17046273-17046292 | MS.gene82139:intron | 25.0% |
| ! | ATATGGTTGTAATGTAATGT+AGG | + | chr5.2:17048492-17048511 | None:intergenic | 25.0% |
| ! | ATGTAGATAAAATATTGCAC+TGG | + | chr5.2:17048880-17048899 | None:intergenic | 25.0% |
| ! | ATGTGAAAGTCATTTATGTT+CGG | + | chr5.2:17045262-17045281 | None:intergenic | 25.0% |
| ! | ATGTGAATGTTATTGTTGAT+TGG | + | chr5.2:17046566-17046585 | None:intergenic | 25.0% |
| ! | CAAAGCTAAATCATTTGAAT+AGG | + | chr5.2:17048545-17048564 | None:intergenic | 25.0% |
| ! | CAATTTGAAAGAATTATTGG+TGG | + | chr5.2:17048152-17048171 | None:intergenic | 25.0% |
| ! | CACCAATAATTCTTTCAAAT+TGG | - | chr5.2:17048150-17048169 | MS.gene82139:intron | 25.0% |
| ! | CGATATATTGGAAAATGAAA+GGG | - | chr5.2:17046274-17046293 | MS.gene82139:intron | 25.0% |
| ! | CTTATTTCATATCAAGCAAA+AGG | + | chr5.2:17046606-17046625 | None:intergenic | 25.0% |
| ! | GCATAAACAAAACTAATGAT+AGG | + | chr5.2:17046107-17046126 | None:intergenic | 25.0% |
| ! | TAAGTTTAGAGATCTTTGTT+TGG | - | chr5.2:17045958-17045977 | MS.gene82139:CDS | 25.0% |
| ! | TATAAACATAACACCCAAAT+GGG | - | chr5.2:17048406-17048425 | MS.gene82139:CDS | 25.0% |
| ! | TTACTTCATGATTGAACTTA+TGG | - | chr5.2:17045655-17045674 | MS.gene82139:intron | 25.0% |
| ! | TTATAAACATAACACCCAAA+TGG | - | chr5.2:17048405-17048424 | MS.gene82139:CDS | 25.0% |
| ! | TTATTAATATTTGCGGAAGT+TGG | - | chr5.2:17049221-17049240 | MS.gene82139:intron | 25.0% |
| !! | ATGCAAATGACTTTAAAAGA+CGG | + | chr5.2:17046764-17046783 | None:intergenic | 25.0% |
| !! | ATTTTGCACTAGTACTATTT+AGG | - | chr5.2:17044964-17044983 | MS.gene82139:CDS | 25.0% |
| !! | CTATTCAAATGATTTAGCTT+TGG | - | chr5.2:17048543-17048562 | MS.gene82139:intron | 25.0% |
| !! | GTAGTTTATCTAGAATAACA+AGG | + | chr5.2:17048108-17048127 | None:intergenic | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr5.2:17045105-17045124 | MS.gene82139:intron | 25.0% |
| !!! | CATTTTTATTTTCCTTTTGG+TGG | - | chr5.2:17049290-17049309 | MS.gene82139:intron | 25.0% |
| !!! | TTAGTTTTGTTTATGCTTCA+AGG | - | chr5.2:17046111-17046130 | MS.gene82139:intron | 25.0% |
| AAAAACACTAAGCAAGTGTT+CGG | + | chr5.2:17045342-17045361 | None:intergenic | 30.0% | |
| AAGCTAAAAATCAACTCTAG+AGG | + | chr5.2:17045201-17045220 | None:intergenic | 30.0% | |
| AGGCTAAAAATCAATTCTAG+AGG | + | chr5.2:17045481-17045500 | None:intergenic | 30.0% | |
| ATCTTAGATATCTTCTCATC+AGG | - | chr5.2:17047012-17047031 | MS.gene82139:intron | 30.0% | |
| ATCTTCAAAGAAATACCTGA+CGG | + | chr5.2:17049010-17049029 | None:intergenic | 30.0% | |
| CAAAACTAATGATAGGCAAA+AGG | + | chr5.2:17046100-17046119 | None:intergenic | 30.0% | |
| CTTGTATCTATTGTACATGT+TGG | - | chr5.2:17048191-17048210 | MS.gene82139:intron | 30.0% | |
| GTACAATAGATACAAGAACA+AGG | + | chr5.2:17048187-17048206 | None:intergenic | 30.0% | |
| TCTCTTCTTGAATCTTCATT+AGG | + | chr5.2:17047685-17047704 | None:intergenic | 30.0% | |
| TGAAAAATATTGTGAGACCA+TGG | + | chr5.2:17047882-17047901 | None:intergenic | 30.0% | |
| TGTTTATAACGAATGCCATT+TGG | + | chr5.2:17048394-17048413 | None:intergenic | 30.0% | |
| TTAGCTATACCATTGTAGAA+AGG | + | chr5.2:17047225-17047244 | None:intergenic | 30.0% | |
| TTTGCCTCTTCAAAAAAAAG+TGG | + | chr5.2:17045065-17045084 | None:intergenic | 30.0% | |
| ! | AAAAAAGTATGTGCCCATTT+GGG | + | chr5.2:17048422-17048441 | None:intergenic | 30.0% |
| ! | CAATTTTGTCTCTTCCAAAA+TGG | + | chr5.2:17045370-17045389 | None:intergenic | 30.0% |
| ! | CTATCTTGTGGCTATAATTT+TGG | - | chr5.2:17046482-17046501 | MS.gene82139:intron | 30.0% |
| ! | CTTCTTTTTCCAGACAAAAA+TGG | - | chr5.2:17046800-17046819 | MS.gene82139:intron | 30.0% |
| ! | TGATCAATTTTATGTAGCCA+TGG | - | chr5.2:17047862-17047881 | MS.gene82139:intron | 30.0% |
| !! | CATTTTGGAAGAGACAAAAT+TGG | - | chr5.2:17045368-17045387 | MS.gene82139:intron | 30.0% |
| !! | TTGTTTTGTATACTTCAGTG+AGG | - | chr5.2:17046153-17046172 | MS.gene82139:intron | 30.0% |
| !! | TTTGTTTTCTTGTTTGTCAC+TGG | - | chr5.2:17047648-17047667 | MS.gene82139:intron | 30.0% |
| !!! | AACACTTGCTTAGTGTTTTT+TGG | - | chr5.2:17045342-17045361 | MS.gene82139:CDS | 30.0% |
| !!! | CTAGAGTTGATTTTTAGCTT+TGG | - | chr5.2:17045201-17045220 | MS.gene82139:intron | 30.0% |
| !!! | TTCTTTGAAGATTTTCGAGT+CGG | - | chr5.2:17049018-17049037 | MS.gene82139:intron | 30.0% |
| AAACTTCGTCAAGAAGTAGA+AGG | - | chr5.2:17046929-17046948 | MS.gene82139:intron | 35.0% | |
| AAAGTCAAATCAGCAACCAA+TGG | + | chr5.2:17047497-17047516 | None:intergenic | 35.0% | |
| AAATCTTCACGCTAAATGCA+GGG | - | chr5.2:17047789-17047808 | MS.gene82139:intron | 35.0% | |
| AAATGCTGTAAACGTCACAT+TGG | + | chr5.2:17045996-17046015 | None:intergenic | 35.0% | |
| AAGTCAAATCAGCAACCAAT+GGG | + | chr5.2:17047496-17047515 | None:intergenic | 35.0% | |
| AGAGGCAAAATTGATCTTAG+AGG | - | chr5.2:17045076-17045095 | MS.gene82139:intron | 35.0% | |
| CAGTCTATACTTAGACAGTT+GGG | - | chr5.2:17045803-17045822 | MS.gene82139:intron | 35.0% | |
| CATGATTGAACTTATGGTGT+CGG | - | chr5.2:17045661-17045680 | MS.gene82139:intron | 35.0% | |
| CGGTAACTCATACGATATAT+TGG | - | chr5.2:17046262-17046281 | MS.gene82139:intron | 35.0% | |
| CTAAGGACTGTTGTAAGTAT+GGG | - | chr5.2:17046183-17046202 | MS.gene82139:CDS | 35.0% | |
| GATAGCCAGTAAATCAGATT+AGG | + | chr5.2:17046467-17046486 | None:intergenic | 35.0% | |
| GGAAGAGACAAAATTGGTTA+TGG | - | chr5.2:17045374-17045393 | MS.gene82139:intron | 35.0% | |
| GGATTAACTTTCTCATTTGC+AGG | + | chr5.2:17048373-17048392 | None:intergenic | 35.0% | |
| GGTGCTTCTAATTATGCTTT+AGG | - | chr5.2:17046821-17046840 | MS.gene82139:intron | 35.0% | |
| GTAGTAATTTACTGCCACAA+TGG | - | chr5.2:17046956-17046975 | MS.gene82139:intron | 35.0% | |
| GTGAACAATTCACAAGTCTA+AGG | + | chr5.2:17045695-17045714 | None:intergenic | 35.0% | |
| TCAACAGTAACTCTATTTGG+TGG | + | chr5.2:17049123-17049142 | None:intergenic | 35.0% | |
| TCAATAGTTCCAGAGAACTA+GGG | + | chr5.2:17046632-17046651 | None:intergenic | 35.0% | |
| TCTAGATAAACTACATGCTG+AGG | - | chr5.2:17048114-17048133 | MS.gene82139:CDS | 35.0% | |
| TTGTAACCTGTACCTTTCAT+CGG | - | chr5.2:17048259-17048278 | MS.gene82139:CDS | 35.0% | |
| TTGTGCCTAATCTGATTTAC+TGG | - | chr5.2:17046459-17046478 | MS.gene82139:intron | 35.0% | |
| ! | AGGTGATCAGGTAATCTTTT+GGG | - | chr5.2:17046316-17046335 | MS.gene82139:intron | 35.0% |
| ! | CAAAAAAGTATGTGCCCATT+TGG | + | chr5.2:17048423-17048442 | None:intergenic | 35.0% |
| ! | CAGGTAGTGATCATTTTACA+TGG | - | chr5.2:17044931-17044950 | MS.gene82139:CDS | 35.0% |
| ! | GACAAATCTTGGTGCAAAAA+AGG | - | chr5.2:17048811-17048830 | MS.gene82139:intron | 35.0% |
| ! | GGTTGATTATGTTCCTCTTT+TGG | + | chr5.2:17048352-17048371 | None:intergenic | 35.0% |
| ! | TAATGGAAGGCATAGTTCTT+CGG | - | chr5.2:17046693-17046712 | MS.gene82139:intron | 35.0% |
| ! | TAGGTGATCAGGTAATCTTT+TGG | - | chr5.2:17046315-17046334 | MS.gene82139:intron | 35.0% |
| ! | TCATGTGAAAGTGAGTTGAA+TGG | + | chr5.2:17045233-17045252 | None:intergenic | 35.0% |
| ! | TGAGTTGAACAATAAAGTCG+AGG | + | chr5.2:17045501-17045520 | None:intergenic | 35.0% |
| ! | TGGTTCTGCGTTGATAAAAA+TGG | + | chr5.2:17045614-17045633 | None:intergenic | 35.0% |
| !! | CACTTGTTAGTGCTACTTAA+TGG | - | chr5.2:17046676-17046695 | MS.gene82139:intron | 35.0% |
| !! | TGTTAGTGCTACTTAATGGA+AGG | - | chr5.2:17046680-17046699 | MS.gene82139:intron | 35.0% |
| !!! | AAGATTTTCGAGTCGGTATA+TGG | - | chr5.2:17049025-17049044 | MS.gene82139:intron | 35.0% |
| !!! | AGTGTTTTTTGGTGCCATTT+TGG | - | chr5.2:17045353-17045372 | MS.gene82139:intron | 35.0% |
| !!! | ATTTTTTTTTGGTTTGGGGG+AGG | + | chr5.2:17048016-17048035 | None:intergenic | 35.0% |
| !!! | GGTTCCACTTTTTTTTGAAG+AGG | - | chr5.2:17045058-17045077 | MS.gene82139:intron | 35.0% |
| !!! | TGAGTGGAGTTTTTTACCTT+TGG | - | chr5.2:17047369-17047388 | MS.gene82139:CDS | 35.0% |
| !!! | TTAGAAGCACCATTTTTGTC+TGG | + | chr5.2:17046812-17046831 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTGGTTTGGGGGA+GGG | + | chr5.2:17048015-17048034 | None:intergenic | 35.0% |
| AAAAGGGGGAACAAAAGGAA+AGG | + | chr5.2:17048048-17048067 | None:intergenic | 40.0% | |
| AAATGGGTGTATGACCTACA+AGG | + | chr5.2:17048934-17048953 | None:intergenic | 40.0% | |
| AACAGTCAACTGCAGGAATA+TGG | + | chr5.2:17048509-17048528 | None:intergenic | 40.0% | |
| AATGAAAGGGAGACTTTGCT+TGG | - | chr5.2:17046287-17046306 | MS.gene82139:intron | 40.0% | |
| AATTCAATGGCAATGCTGGA+TGG | - | chr5.2:17049353-17049372 | MS.gene82139:intron | 40.0% | |
| ACAAATAACAGGAGCTCCTT+TGG | - | chr5.2:17046874-17046893 | MS.gene82139:intron | 40.0% | |
| ACAAGTTGCCAAACAACAAC+AGG | - | chr5.2:17044912-17044931 | MS.gene82139:CDS | 40.0% | |
| ACGAAGTTTGTCGTAGTTGT+GGG | + | chr5.2:17046918-17046937 | None:intergenic | 40.0% | |
| AGAGCATAAATATGCCCTTG+TGG | - | chr5.2:17047129-17047148 | MS.gene82139:CDS | 40.0% | |
| AGTCAAATCAGCAACCAATG+GGG | + | chr5.2:17047495-17047514 | None:intergenic | 40.0% | |
| ATACCATTGTAGAAAGGCTC+TGG | + | chr5.2:17047219-17047238 | None:intergenic | 40.0% | |
| ATCATTTCCACTGCCAAAAG+AGG | - | chr5.2:17048336-17048355 | MS.gene82139:intron | 40.0% | |
| ATGAAAGGGAGACTTTGCTT+GGG | - | chr5.2:17046288-17046307 | MS.gene82139:intron | 40.0% | |
| ATTTGATGCTCAAGCTGAAG+GGG | - | chr5.2:17048950-17048969 | MS.gene82139:intron | 40.0% | |
| CACAGTCAATCTGTCCATTA+GGG | - | chr5.2:17047741-17047760 | MS.gene82139:intron | 40.0% | |
| CACTTCTACAAAGACTGCTA+AGG | - | chr5.2:17045898-17045917 | MS.gene82139:CDS | 40.0% | |
| CATTTGATGCTCAAGCTGAA+GGG | - | chr5.2:17048949-17048968 | MS.gene82139:intron | 40.0% | |
| CCAATAGGTGTAACTCGATA+GGG | - | chr5.2:17047403-17047422 | MS.gene82139:CDS | 40.0% | |
| CCTATCGAGTTACACCTATT+GGG | + | chr5.2:17047405-17047424 | None:intergenic | 40.0% | |
| CTGGAAATTCAACCACCAAA+AGG | + | chr5.2:17049305-17049324 | None:intergenic | 40.0% | |
| CTTCAGCTTGAGCATCAAAT+GGG | + | chr5.2:17048950-17048969 | None:intergenic | 40.0% | |
| GAAATCTTCACGCTAAATGC+AGG | - | chr5.2:17047788-17047807 | MS.gene82139:intron | 40.0% | |
| GAAGCAAGCTAGTAGATTGA+GGG | - | chr5.2:17044888-17044907 | MS.gene82139:CDS | 40.0% | |
| GCAAGTGCTTCTCTTCAATT+CGG | - | chr5.2:17046242-17046261 | MS.gene82139:intron | 40.0% | |
| GCAGTCTATACTTAGACAGT+TGG | - | chr5.2:17045802-17045821 | MS.gene82139:intron | 40.0% | |
| GCTAAGGACTGTTGTAAGTA+TGG | - | chr5.2:17046182-17046201 | MS.gene82139:CDS | 40.0% | |
| GGAAATGATGTAGAGTCTTG+TGG | + | chr5.2:17048325-17048344 | None:intergenic | 40.0% | |
| GTATACTTCAGTGAGGAAGT+TGG | - | chr5.2:17046160-17046179 | MS.gene82139:intron | 40.0% | |
| GTCAATAGTTCCAGAGAACT+AGG | + | chr5.2:17046633-17046652 | None:intergenic | 40.0% | |
| TACCTTTCATCGGATGTTCT+TGG | - | chr5.2:17048269-17048288 | MS.gene82139:CDS | 40.0% | |
| TGAACCACGATTAACCTCAT+AGG | + | chr5.2:17047343-17047362 | None:intergenic | 40.0% | |
| TGGTCTGAAGGAGAATTCAA+TGG | - | chr5.2:17049340-17049359 | MS.gene82139:intron | 40.0% | |
| TGTCTCTGTACATAAGCAGA+GGG | + | chr5.2:17049382-17049401 | None:intergenic | 40.0% | |
| TGTGGCAGTAAATTACTACC+TGG | + | chr5.2:17046955-17046974 | None:intergenic | 40.0% | |
| TTCTGTTAGTTCCAAGCAGA+TGG | - | chr5.2:17046052-17046071 | MS.gene82139:intron | 40.0% | |
| TTCTTCGATACTCTTCAGTG+TGG | - | chr5.2:17046343-17046362 | MS.gene82139:intron | 40.0% | |
| ! | AATAAGAAGCCCTAGTTCTC+TGG | - | chr5.2:17046620-17046639 | MS.gene82139:intron | 40.0% |
| ! | ATCCAGCTACCTCTTTTACA+TGG | - | chr5.2:17048718-17048737 | MS.gene82139:intron | 40.0% |
| ! | ATTTTCAGCGGCATATCGTT+CGG | - | chr5.2:17046012-17046031 | MS.gene82139:intron | 40.0% |
| ! | CTGATTTACTGGCTATCTTG+TGG | - | chr5.2:17046470-17046489 | MS.gene82139:intron | 40.0% |
| ! | GACGTTTACAGCATTTTCAG+CGG | - | chr5.2:17046000-17046019 | MS.gene82139:intron | 40.0% |
| ! | GATCACTACCTGTTGTTGTT+TGG | + | chr5.2:17044923-17044942 | None:intergenic | 40.0% |
| ! | GGTGATCAGGTAATCTTTTG+GGG | - | chr5.2:17046317-17046336 | MS.gene82139:intron | 40.0% |
| ! | TCCAGCTACCTCTTTTACAT+GGG | - | chr5.2:17048719-17048738 | MS.gene82139:intron | 40.0% |
| ! | TTATGTTCCTCTTTTGGCAG+TGG | + | chr5.2:17048346-17048365 | None:intergenic | 40.0% |
| ! | TTTCCTTTTGTTCCCCCTTT+TGG | - | chr5.2:17048047-17048066 | MS.gene82139:CDS | 40.0% |
| ! | TTTCTTGTTTGTCACTGGCA+AGG | - | chr5.2:17047653-17047672 | MS.gene82139:intron | 40.0% |
| !! | ATTGAAGAGAAGCACTTGCA+AGG | + | chr5.2:17046241-17046260 | None:intergenic | 40.0% |
| !! | CTATTGTACATGTTGGCTTC+TGG | - | chr5.2:17048198-17048217 | MS.gene82139:intron | 40.0% |
| !! | CTCATCTTGATTTGCCTTGT+AGG | - | chr5.2:17048917-17048936 | MS.gene82139:intron | 40.0% |
| !! | CTTTTGGTGGTTGAATTTCC+AGG | - | chr5.2:17049303-17049322 | MS.gene82139:intron | 40.0% |
| !! | TTGAAGAGAAGCACTTGCAA+GGG | + | chr5.2:17046240-17046259 | None:intergenic | 40.0% |
| !!! | GGGCACATACTTTTTTGCAA+AGG | - | chr5.2:17048426-17048445 | MS.gene82139:CDS | 40.0% |
| AAATATGCCCTTGTGGCACT+TGG | - | chr5.2:17047136-17047155 | MS.gene82139:CDS | 45.0% | |
| AACAAGCCTTAGCGTGTGTT+TGG | + | chr5.2:17045634-17045653 | None:intergenic | 45.0% | |
| AATAACTTCCCCCTGAAAGG+AGG | + | chr5.2:17047455-17047474 | None:intergenic | 45.0% | |
| AATTTCCAGGTTGCTGCCAA+TGG | - | chr5.2:17049316-17049335 | MS.gene82139:intron | 45.0% | |
| ACTTAGCAATGAACCGCTCA+TGG | - | chr5.2:17045829-17045848 | MS.gene82139:intron | 45.0% | |
| AGTACCAGCGAACAAGATAC+CGG | - | chr5.2:17049408-17049427 | MS.gene82139:CDS | 45.0% | |
| AGTTCCAAGCAGATGGAGAT+AGG | - | chr5.2:17046059-17046078 | MS.gene82139:intron | 45.0% | |
| ATCGAGTTACACCTATTGGG+AGG | + | chr5.2:17047402-17047421 | None:intergenic | 45.0% | |
| CCACAGTCAATCTGTCCATT+AGG | - | chr5.2:17047740-17047759 | MS.gene82139:intron | 45.0% | |
| CCATTTGATGCTCAAGCTGA+AGG | - | chr5.2:17048948-17048967 | MS.gene82139:intron | 45.0% | |
| CCCAATAGGTGTAACTCGAT+AGG | - | chr5.2:17047402-17047421 | MS.gene82139:CDS | 45.0% | |
| CCCTATCGAGTTACACCTAT+TGG | + | chr5.2:17047406-17047425 | None:intergenic | 45.0% | |
| CCTTCAGCTTGAGCATCAAA+TGG | + | chr5.2:17048951-17048970 | None:intergenic | 45.0% | |
| CGATTATGTTGTAGTCCGTC+AGG | - | chr5.2:17048992-17049011 | MS.gene82139:intron | 45.0% | |
| CTCCAAGAACATCCGATGAA+AGG | + | chr5.2:17048274-17048293 | None:intergenic | 45.0% | |
| CTCTGCTTATGTACAGAGAC+AGG | - | chr5.2:17049381-17049400 | MS.gene82139:CDS | 45.0% | |
| CTGTCTCTGTACATAAGCAG+AGG | + | chr5.2:17049383-17049402 | None:intergenic | 45.0% | |
| CTTGATCAACAGTCAACTGC+AGG | + | chr5.2:17048516-17048535 | None:intergenic | 45.0% | |
| GACGAAGTTTGTCGTAGTTG+TGG | + | chr5.2:17046919-17046938 | None:intergenic | 45.0% | |
| GAGACTTTGCTTGGGATCTT+AGG | - | chr5.2:17046296-17046315 | MS.gene82139:intron | 45.0% | |
| GCAAGTCAAATCAGCTAGAC+TGG | + | chr5.2:17049271-17049290 | None:intergenic | 45.0% | |
| GGAAATAACTTCCCCCTGAA+AGG | + | chr5.2:17047458-17047477 | None:intergenic | 45.0% | |
| GGAAGCAAGCTAGTAGATTG+AGG | - | chr5.2:17044887-17044906 | MS.gene82139:CDS | 45.0% | |
| GGAGAATTCAATGGCAATGC+TGG | - | chr5.2:17049349-17049368 | MS.gene82139:intron | 45.0% | |
| TAAGCAAGTGTTCGGTTCTG+CGG | + | chr5.2:17045334-17045353 | None:intergenic | 45.0% | |
| TATAGATCTCTGAGCCACTG+CGG | - | chr5.2:17046849-17046868 | MS.gene82139:intron | 45.0% | |
| TATTCCGGTATCTTGTTCGC+TGG | + | chr5.2:17049415-17049434 | None:intergenic | 45.0% | |
| TCAGATTCATCAGCCATGAG+CGG | + | chr5.2:17045845-17045864 | None:intergenic | 45.0% | |
| TCCCATGTAAAAGAGGTAGC+TGG | + | chr5.2:17048723-17048742 | None:intergenic | 45.0% | |
| TCGTGGTTCAACTGTTTGAG+TGG | - | chr5.2:17047353-17047372 | MS.gene82139:intron | 45.0% | |
| TCTCCAGAGCCTTTCTACAA+TGG | - | chr5.2:17047213-17047232 | MS.gene82139:CDS | 45.0% | |
| TGAGCGGTTCATTGCTAAGT+TGG | + | chr5.2:17045829-17045848 | None:intergenic | 45.0% | |
| TTCACGCTAAATGCAGGGTT+CGG | - | chr5.2:17047794-17047813 | MS.gene82139:intron | 45.0% | |
| TTCAGTGAGGAAGTTGGCTA+AGG | - | chr5.2:17046166-17046185 | MS.gene82139:intron | 45.0% | |
| TTCTCCTTCAGACCATCCAT+TGG | + | chr5.2:17049335-17049354 | None:intergenic | 45.0% | |
| TTCTCTACCAAGTGCCACAA+GGG | + | chr5.2:17047146-17047165 | None:intergenic | 45.0% | |
| TTCTGCGTCCCATGTAAAAG+AGG | + | chr5.2:17048730-17048749 | None:intergenic | 45.0% | |
| TTTCTGCAGAGAGTTCCATG+AGG | - | chr5.2:17047080-17047099 | MS.gene82139:CDS | 45.0% | |
| ! | ATCAGGCTGCTGAAGTTTTG+AGG | - | chr5.2:17047029-17047048 | MS.gene82139:intron | 45.0% |
| ! | ATGCTGAGAGAGCTTTTCAC+CGG | - | chr5.2:17048077-17048096 | MS.gene82139:CDS | 45.0% |
| ! | CCTAATGGACAGATTGACTG+TGG | + | chr5.2:17047743-17047762 | None:intergenic | 45.0% |
| ! | CTAGAATAACAAGGGCATGC+CGG | + | chr5.2:17048099-17048118 | None:intergenic | 45.0% |
| ! | GAACATCCGATGAAAGGTAC+AGG | + | chr5.2:17048268-17048287 | None:intergenic | 45.0% |
| ! | TTTTCAGCGGCATATCGTTC+GGG | - | chr5.2:17046013-17046032 | MS.gene82139:intron | 45.0% |
| !! | TGAAGAGAAGCACTTGCAAG+GGG | + | chr5.2:17046239-17046258 | None:intergenic | 45.0% |
| !! | TTCTGCATTCTGAAGCCTCA+TGG | + | chr5.2:17047098-17047117 | None:intergenic | 45.0% |
| ACTCGCGTTCTACACCCTAA+TGG | + | chr5.2:17047758-17047777 | None:intergenic | 50.0% | |
| AGATGGCGTGCATCTTCCAA+AGG | + | chr5.2:17046893-17046912 | None:intergenic | 50.0% | |
| AGGCGAGTGTCAAAAGCTCT+CGG | + | chr5.2:17047323-17047342 | None:intergenic | 50.0% | |
| ATAGATCTCTGAGCCACTGC+GGG | - | chr5.2:17046850-17046869 | MS.gene82139:intron | 50.0% | |
| ATCAGCAACCAATGGGGTTC+TGG | + | chr5.2:17047489-17047508 | None:intergenic | 50.0% | |
| ATTGGGAGGCTGAGAACCAA+AGG | + | chr5.2:17047388-17047407 | None:intergenic | 50.0% | |
| CAAGGGGGTAAGTACTACCT+TGG | + | chr5.2:17046223-17046242 | None:intergenic | 50.0% | |
| CCACAATGGCATGCATATGG+TGG | - | chr5.2:17046970-17046989 | MS.gene82139:intron | 50.0% | |
| CCACCATATGCATGCCATTG+TGG | + | chr5.2:17046973-17046992 | None:intergenic | 50.0% | |
| CTCGCCTATGAGGTTAATCG+TGG | - | chr5.2:17047336-17047355 | MS.gene82139:intron | 50.0% | |
| CTGCCAAAAGGGGGAACAAA+AGG | + | chr5.2:17048053-17048072 | None:intergenic | 50.0% | |
| CTGCCACAATGGCATGCATA+TGG | - | chr5.2:17046967-17046986 | MS.gene82139:intron | 50.0% | |
| CTTCTCTACCAAGTGCCACA+AGG | + | chr5.2:17047147-17047166 | None:intergenic | 50.0% | |
| GAGTGTCAAAAGCTCTCGGT+TGG | + | chr5.2:17047319-17047338 | None:intergenic | 50.0% | |
| GCAGAACCAAACACACGCTA+AGG | - | chr5.2:17045625-17045644 | MS.gene82139:intron | 50.0% | |
| GCTTGGGATCTTAGGTGATC+AGG | - | chr5.2:17046304-17046323 | MS.gene82139:intron | 50.0% | |
| GGGACTGAGAATGACAACCA+AGG | - | chr5.2:17046203-17046222 | MS.gene82139:CDS | 50.0% | |
| GTCACCTATCTCCATCTGCT+TGG | + | chr5.2:17046066-17046085 | None:intergenic | 50.0% | |
| TCAGCAACCAATGGGGTTCT+GGG | + | chr5.2:17047488-17047507 | None:intergenic | 50.0% | |
| TCAGCATCCACCTGCCAAAA+GGG | + | chr5.2:17048064-17048083 | None:intergenic | 50.0% | |
| TCGTCAAGAAGTAGAAGGCC+AGG | - | chr5.2:17046934-17046953 | MS.gene82139:intron | 50.0% | |
| TGCTGCTATGTCGTCAGTTG+AGG | - | chr5.2:17047171-17047190 | MS.gene82139:CDS | 50.0% | |
| TGTCGTAGTTGTGGGTGAGA+TGG | + | chr5.2:17046910-17046929 | None:intergenic | 50.0% | |
| TTTCAGCGGCATATCGTTCG+GGG | - | chr5.2:17046014-17046033 | MS.gene82139:intron | 50.0% | |
| ! | CTTTTGTTCCCCCTTTTGGC+AGG | - | chr5.2:17048051-17048070 | MS.gene82139:CDS | 50.0% |
| ! | GCTTTTGACACTCGCCTATG+AGG | - | chr5.2:17047326-17047345 | MS.gene82139:intron | 50.0% |
| ! | TTGGTTCTCAGCCTCCCAAT+AGG | - | chr5.2:17047388-17047407 | MS.gene82139:CDS | 50.0% |
| !! | GAAGAGAAGCACTTGCAAGG+GGG | + | chr5.2:17046238-17046257 | None:intergenic | 50.0% |
| !! | GAGGCGTCGATCAAAGTTGA+GGG | - | chr5.2:17047048-17047067 | MS.gene82139:intron | 50.0% |
| !! | TGAGGCGTCGATCAAAGTTG+AGG | - | chr5.2:17047047-17047066 | MS.gene82139:intron | 50.0% |
| !!! | TTTTTTGGTTTGGGGGAGGG+AGG | + | chr5.2:17048012-17048031 | None:intergenic | 50.0% |
| ACCATCCATTGGCAGCAACC+TGG | + | chr5.2:17049324-17049343 | None:intergenic | 55.0% | |
| ACTCGAACCCAGAACCCCAT+TGG | - | chr5.2:17047478-17047497 | MS.gene82139:intron | 55.0% | |
| AGCATCCACCTGCCAAAAGG+GGG | + | chr5.2:17048062-17048081 | None:intergenic | 55.0% | |
| CAGCATCCACCTGCCAAAAG+GGG | + | chr5.2:17048063-17048082 | None:intergenic | 55.0% | |
| CAGGTTCTCCTCCTTTCAGG+GGG | - | chr5.2:17047444-17047463 | MS.gene82139:intron | 55.0% | |
| CCACTGCGGGCACAAATAAC+AGG | - | chr5.2:17046863-17046882 | MS.gene82139:intron | 55.0% | |
| CCAGGTTCTCCTCCTTTCAG+GGG | - | chr5.2:17047443-17047462 | MS.gene82139:intron | 55.0% | |
| CCCAGGTTCTCCTCCTTTCA+GGG | - | chr5.2:17047442-17047461 | MS.gene82139:intron | 55.0% | |
| CCCTGAAAGGAGGAGAACCT+GGG | + | chr5.2:17047445-17047464 | None:intergenic | 55.0% | |
| CCTGAAAGGAGGAGAACCTG+GGG | + | chr5.2:17047444-17047463 | None:intergenic | 55.0% | |
| CTCAGCATCCACCTGCCAAA+AGG | + | chr5.2:17048065-17048084 | None:intergenic | 55.0% | |
| GAGGAGAACCTGGGGAATCT+GGG | + | chr5.2:17047436-17047455 | None:intergenic | 55.0% | |
| GATTCGAACCCAGATTCCCC+AGG | - | chr5.2:17047425-17047444 | MS.gene82139:CDS | 55.0% | |
| GCTGCCAATGGATGGTCTGA+AGG | - | chr5.2:17049328-17049347 | MS.gene82139:intron | 55.0% | |
| TCCAGGTTGCTGCCAATGGA+TGG | - | chr5.2:17049320-17049339 | MS.gene82139:intron | 55.0% | |
| ! | CCTGTTATTTGTGCCCGCAG+TGG | + | chr5.2:17046866-17046885 | None:intergenic | 55.0% |
| ! | TTGTTCCCCCTTTTGGCAGG+TGG | - | chr5.2:17048054-17048073 | MS.gene82139:CDS | 55.0% |
| !! | AATGGGGTTCTGGGTTCGAG+TGG | + | chr5.2:17047479-17047498 | None:intergenic | 55.0% |
| !! | CATATCGTTCGGGGCGTTGA+AGG | - | chr5.2:17046023-17046042 | MS.gene82139:intron | 55.0% |
| CCCCAGGTTCTCCTCCTTTC+AGG | - | chr5.2:17047441-17047460 | MS.gene82139:intron | 60.0% | |
| CCCCTGAAAGGAGGAGAACC+TGG | + | chr5.2:17047446-17047465 | None:intergenic | 60.0% | |
| GGAGGAGAACCTGGGGAATC+TGG | + | chr5.2:17047437-17047456 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 17044874 | 17049435 | 17044874 | ID=MS.gene82139 |
| chr5.2 | mRNA | 17044874 | 17049435 | 17044874 | ID=MS.gene82139.t1;Parent=MS.gene82139 |
| chr5.2 | exon | 17049376 | 17049435 | 17049376 | ID=MS.gene82139.t1.exon1;Parent=MS.gene82139.t1 |
| chr5.2 | CDS | 17049376 | 17049435 | 17049376 | ID=cds.MS.gene82139.t1;Parent=MS.gene82139.t1 |
| chr5.2 | exon | 17048390 | 17048503 | 17048390 | ID=MS.gene82139.t1.exon2;Parent=MS.gene82139.t1 |
| chr5.2 | CDS | 17048390 | 17048503 | 17048390 | ID=cds.MS.gene82139.t1;Parent=MS.gene82139.t1 |
| chr5.2 | exon | 17048229 | 17048298 | 17048229 | ID=MS.gene82139.t1.exon3;Parent=MS.gene82139.t1 |
| chr5.2 | CDS | 17048229 | 17048298 | 17048229 | ID=cds.MS.gene82139.t1;Parent=MS.gene82139.t1 |
| chr5.2 | exon | 17047984 | 17048138 | 17047984 | ID=MS.gene82139.t1.exon4;Parent=MS.gene82139.t1 |
| chr5.2 | CDS | 17047984 | 17048138 | 17047984 | ID=cds.MS.gene82139.t1;Parent=MS.gene82139.t1 |
| chr5.2 | exon | 17047354 | 17047455 | 17047354 | ID=MS.gene82139.t1.exon5;Parent=MS.gene82139.t1 |
| chr5.2 | CDS | 17047354 | 17047455 | 17047354 | ID=cds.MS.gene82139.t1;Parent=MS.gene82139.t1 |
| chr5.2 | exon | 17047075 | 17047275 | 17047075 | ID=MS.gene82139.t1.exon6;Parent=MS.gene82139.t1 |
| chr5.2 | CDS | 17047075 | 17047275 | 17047075 | ID=cds.MS.gene82139.t1;Parent=MS.gene82139.t1 |
| chr5.2 | exon | 17046174 | 17046236 | 17046174 | ID=MS.gene82139.t1.exon7;Parent=MS.gene82139.t1 |
| chr5.2 | CDS | 17046174 | 17046236 | 17046174 | ID=cds.MS.gene82139.t1;Parent=MS.gene82139.t1 |
| chr5.2 | exon | 17045862 | 17046011 | 17045862 | ID=MS.gene82139.t1.exon8;Parent=MS.gene82139.t1 |
| chr5.2 | CDS | 17045862 | 17046011 | 17045862 | ID=cds.MS.gene82139.t1;Parent=MS.gene82139.t1 |
| chr5.2 | exon | 17045296 | 17045370 | 17045296 | ID=MS.gene82139.t1.exon9;Parent=MS.gene82139.t1 |
| chr5.2 | CDS | 17045296 | 17045370 | 17045296 | ID=cds.MS.gene82139.t1;Parent=MS.gene82139.t1 |
| chr5.2 | exon | 17044874 | 17044984 | 17044874 | ID=MS.gene82139.t1.exon10;Parent=MS.gene82139.t1 |
| chr5.2 | CDS | 17044874 | 17044984 | 17044874 | ID=cds.MS.gene82139.t1;Parent=MS.gene82139.t1 |
| Gene Sequence |
| Protein sequence |
