Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83623.t1 | XP_024632403.1 | 89.7 | 561 | 52 | 3 | 1 | 556 | 1 | 560 | 6.30E-214 | 754.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83623.t1 | Q8VZ67 | 72.1 | 305 | 69 | 5 | 2 | 293 | 4 | 305 | 1.5e-118 | 428.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83623.t1 | G7IQB2 | 89.5 | 551 | 52 | 3 | 1 | 546 | 1 | 550 | 9.8e-209 | 736.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene83623 | 0.809539 | 1.80E-50 | -1.69E-46 |
| MS.gene050021 | MS.gene83623 | 0.800357 | 1.50E-48 | -1.69E-46 |
| MS.gene050026 | MS.gene83623 | 0.815357 | 9.64E-52 | -1.69E-46 |
| MS.gene050156 | MS.gene83623 | 0.81419 | 1.75E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene83623 | 0.811305 | 7.48E-51 | -1.69E-46 |
| MS.gene050750 | MS.gene83623 | 0.808801 | 2.59E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene83623 | 0.809967 | 1.46E-50 | -1.69E-46 |
| MS.gene051190 | MS.gene83623 | 0.800778 | 1.23E-48 | -1.69E-46 |
| MS.gene051265 | MS.gene83623 | 0.807344 | 5.29E-50 | -1.69E-46 |
| MS.gene051594 | MS.gene83623 | 0.816977 | 4.19E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene83623 | 0.824018 | 1.01E-53 | -1.69E-46 |
| MS.gene052333 | MS.gene83623 | 0.821285 | 4.38E-53 | -1.69E-46 |
| MS.gene053166 | MS.gene83623 | 0.803287 | 3.75E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene83623 | 0.807641 | 4.58E-50 | -1.69E-46 |
| MS.gene053998 | MS.gene83623 | 0.808358 | 3.22E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene83623 | 0.811653 | 6.29E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene83623 | 0.802573 | 5.26E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene83623 | -0.828278 | 9.83E-55 | -1.69E-46 |
| MS.gene054405 | MS.gene83623 | 0.804786 | 1.83E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene83623 | 0.813797 | 2.13E-51 | -1.69E-46 |
| MS.gene054468 | MS.gene83623 | 0.813229 | 2.85E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene83623 | 0.801432 | 9.03E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene83623 | 0.815692 | 8.12E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene83623 | 0.833136 | 6.34E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene83623 | 0.802018 | 6.84E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene83623 | 0.83811 | 3.49E-57 | -1.69E-46 |
| MS.gene057194 | MS.gene83623 | 0.801135 | 1.04E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene83623 | 0.800438 | 1.44E-48 | -1.69E-46 |
| MS.gene059272 | MS.gene83623 | 0.801012 | 1.10E-48 | -1.69E-46 |
| MS.gene059459 | MS.gene83623 | 0.80189 | 7.27E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene83623 | 0.808268 | 3.37E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene83623 | 0.830732 | 2.49E-55 | -1.69E-46 |
| MS.gene060167 | MS.gene83623 | 0.836531 | 8.86E-57 | -1.69E-46 |
| MS.gene060322 | MS.gene83623 | 0.809107 | 2.23E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83623.t1 | MTR_2g040410 | 87.355 | 775 | 44 | 6 | 1 | 723 | 1 | 773 | 0.0 | 1249 |
| MS.gene83623.t1 | MTR_2g040240 | 87.179 | 78 | 10 | 0 | 739 | 816 | 14 | 91 | 3.17e-33 | 127 |
| MS.gene83623.t1 | MTR_2g040240 | 89.189 | 37 | 4 | 0 | 615 | 651 | 14 | 50 | 7.59e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83623.t1 | AT4G19190 | 72.131 | 305 | 69 | 5 | 2 | 293 | 4 | 305 | 2.56e-154 | 464 |
Find 132 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGCAGCCTTGGCACTTTC+AGG | 0.122328 | 2.1:+48956522 | None:intergenic |
| TCTTATTCTTCCGATGATTC+TGG | 0.243873 | 2.1:-48952681 | MS.gene83623:CDS |
| GAGGACATATTTGATGAATA+TGG | 0.278045 | 2.1:-48954122 | MS.gene83623:CDS |
| GAATGATGCAGCCTCTAAAA+TGG | 0.280207 | 2.1:-48954229 | MS.gene83623:intron |
| AATTCTGATGAGAAGGATTC+TGG | 0.293008 | 2.1:-48953458 | MS.gene83623:CDS |
| GATAAGTTGGTCAATAAATC+AGG | 0.296084 | 2.1:+48953971 | None:intergenic |
| TAATTTCCATTGTAACAATC+AGG | 0.316341 | 2.1:+48953596 | None:intergenic |
| TTCAATCTACTTTCCTCGTT+TGG | 0.316730 | 2.1:+48955601 | None:intergenic |
| GCTGCAAGGGCAAAACCTTT+TGG | 0.331961 | 2.1:-48955715 | MS.gene83623:CDS |
| CTCATTCAGTTCTGCAGCCT+TGG | 0.332250 | 2.1:+48956512 | None:intergenic |
| TCGGCAACTATCTGCTGGTT+GGG | 0.335204 | 2.1:+48954149 | None:intergenic |
| ACAATGGAAATTATAAGAAT+AGG | 0.360597 | 2.1:-48953586 | MS.gene83623:CDS |
| GAGAAGATGGAGGGTGAGGA+AGG | 0.369802 | 2.1:-48957044 | None:intergenic |
| CCACGAGGAGGACTGATTCC+TGG | 0.379260 | 2.1:+48954191 | None:intergenic |
| ATCTGCTGGTTGGGGTCGTC+TGG | 0.382938 | 2.1:+48954158 | None:intergenic |
| GCACGGCCGAAAACATCTTT+TGG | 0.385357 | 2.1:+48956278 | None:intergenic |
| ATCCACTTACGGCGTTGATT+AGG | 0.390730 | 2.1:+48956894 | None:intergenic |
| CAATGGAAATTATAAGAATA+GGG | 0.391961 | 2.1:-48953585 | MS.gene83623:CDS |
| AGTTGATTATAAGACGAAAT+CGG | 0.399847 | 2.1:-48956973 | MS.gene83623:CDS |
| CAAGAGATTCAATGATGATA+AGG | 0.402994 | 2.1:-48957006 | MS.gene83623:CDS |
| CTGAAGATCCTGACATTGAC+AGG | 0.415417 | 2.1:-48953544 | MS.gene83623:CDS |
| CTCGGCAACTATCTGCTGGT+TGG | 0.432357 | 2.1:+48954148 | None:intergenic |
| TTTATGTATGTTCGTCCTCC+TGG | 0.432783 | 2.1:-48956552 | MS.gene83623:CDS |
| CGATGATTCTGGCGTTGAAA+AGG | 0.436813 | 2.1:-48952670 | MS.gene83623:CDS |
| GAAGGAGAAGATGGAGGGTG+AGG | 0.440368 | 2.1:-48957048 | None:intergenic |
| TATAAAGAGTCAAGTTCATC+AGG | 0.440439 | 2.1:-48953812 | MS.gene83623:CDS |
| TGTTTAAGATGTGGGAACTA+TGG | 0.443971 | 2.1:-48955670 | MS.gene83623:CDS |
| AAACATCACGGTATGCTTGA+TGG | 0.453262 | 2.1:-48952528 | MS.gene83623:CDS |
| CGATGATTCTGACGTTGAAA+AGG | 0.454352 | 2.1:-48952949 | MS.gene83623:CDS |
| CGATCATCCCTGTCAATGTC+AGG | 0.455262 | 2.1:+48953536 | None:intergenic |
| TTGCGAATTTCGACTCCAAA+AGG | 0.461585 | 2.1:+48955700 | None:intergenic |
| AATGAAGAGGAAGGTCCATC+AGG | 0.469293 | 2.1:+48956441 | None:intergenic |
| GCCAGACTCCTCAGATGAAA+AGG | 0.470106 | 2.1:+48953619 | None:intergenic |
| GCAGATAGTTGCCGAGGAAG+AGG | 0.472515 | 2.1:-48954141 | MS.gene83623:CDS |
| TGGCATTATAGCATCCTTCA+AGG | 0.475418 | 2.1:+48955621 | None:intergenic |
| CGATGATTCTGATGTTGAAA+AGG | 0.478243 | 2.1:-48952577 | MS.gene83623:CDS |
| AAAAGAATGATCGAAGTAGA+AGG | 0.483404 | 2.1:-48953025 | MS.gene83623:CDS |
| AAAAGAATGATCAAAGTAGA+AGG | 0.486744 | 2.1:-48953208 | MS.gene83623:CDS |
| ATCCTAATCAACGCCGTAAG+TGG | 0.487648 | 2.1:-48956896 | MS.gene83623:CDS |
| TAAAGAATGATCGAAGTAGA+AGG | 0.493035 | 2.1:-48953118 | MS.gene83623:CDS |
| ATGTTAAATGTTTAAGATGT+GGG | 0.494765 | 2.1:-48955678 | MS.gene83623:CDS |
| ATCAAATATGTCCTCTTCCT+CGG | 0.494911 | 2.1:+48954130 | None:intergenic |
| TTCAATGATGATAAGGGTGG+AGG | 0.495258 | 2.1:-48956999 | MS.gene83623:CDS |
| AAAAGGATGGTCGAAGTAGA+AGG | 0.495723 | 2.1:-48952560 | MS.gene83623:CDS |
| CTTCCTCGGCAACTATCTGC+TGG | 0.498177 | 2.1:+48954144 | None:intergenic |
| GTTGATTATAAGACGAAATC+GGG | 0.498199 | 2.1:-48956972 | MS.gene83623:CDS |
| GACATTCACGATCACCACTT+TGG | 0.498344 | 2.1:+48955644 | None:intergenic |
| AATGATGCAGCCTCTAAAAT+GGG | 0.503249 | 2.1:-48954228 | MS.gene83623:intron |
| AAGAGATTCAATGATGATAA+GGG | 0.504844 | 2.1:-48957005 | MS.gene83623:CDS |
| CTCGAAGAAGGACAAGGAAA+AGG | 0.506072 | 2.1:-48956691 | MS.gene83623:intron |
| ACGTGAACGCCGAACTGAAG+AGG | 0.508340 | 2.1:-48956850 | MS.gene83623:intron |
| AAAAGGATAGTCGAAGTAGA+AGG | 0.510020 | 2.1:-48952653 | MS.gene83623:CDS |
| AAAAGGATAGTCGAAGTAGA+AGG | 0.510020 | 2.1:-48952932 | MS.gene83623:CDS |
| ACTTCAAATTCTTCTTCAGT+TGG | 0.510634 | 2.1:+48956251 | None:intergenic |
| CGATTATCATTTAAAACAGA+AGG | 0.511657 | 2.1:-48953429 | MS.gene83623:CDS |
| AGGGAAGCATCTTTAGATGA+TGG | 0.512224 | 2.1:-48953887 | MS.gene83623:CDS |
| AATTTCCATTGTAACAATCA+GGG | 0.514193 | 2.1:+48953597 | None:intergenic |
| AATGTTAAATGTTTAAGATG+TGG | 0.517853 | 2.1:-48955679 | MS.gene83623:CDS |
| TTTGTTCAGCAATCCACTTA+CGG | 0.522830 | 2.1:+48956883 | None:intergenic |
| CGGCAACTATCTGCTGGTTG+GGG | 0.524402 | 2.1:+48954150 | None:intergenic |
| CAGTAAGATCTGTGTGGGCA+AGG | 0.525433 | 2.1:+48955554 | None:intergenic |
| AAGATGGAGGGTGAGGAAGG+AGG | 0.525732 | 2.1:-48957041 | MS.gene83623:CDS |
| TGGGAGCTCAAGCAGAAGCC+AGG | 0.528137 | 2.1:-48954209 | MS.gene83623:CDS |
| GACATCTCTCATCTCGAAGA+AGG | 0.529626 | 2.1:-48956703 | MS.gene83623:CDS |
| AGAGGAAGGTCCATCAGGAT+TGG | 0.531357 | 2.1:+48956446 | None:intergenic |
| AGAATATTCAAAAGCACAAG+AGG | 0.534158 | 2.1:-48953505 | MS.gene83623:CDS |
| ACCGTGGAAGTCAGAAGAGC+AGG | 0.535587 | 2.1:-48953268 | MS.gene83623:CDS |
| AGTAGAAGGATCAAAGAAAG+TGG | 0.535688 | 2.1:-48953194 | MS.gene83623:CDS |
| GCAGCTATTGCATTCAGAAA+GGG | 0.542681 | 2.1:-48953906 | MS.gene83623:CDS |
| CTTCTTCAGTTGGTAGAGCA+CGG | 0.543996 | 2.1:+48956261 | None:intergenic |
| CCATCAGGATTGGTTTGTGT+AGG | 0.546610 | 2.1:+48956456 | None:intergenic |
| AGCAGCTATTGCATTCAGAA+AGG | 0.547301 | 2.1:-48953907 | MS.gene83623:CDS |
| AAAAGAATGATCGAAGAAGA+AGG | 0.548205 | 2.1:-48952746 | MS.gene83623:CDS |
| TCAATGATGATAAGGGTGGA+GGG | 0.549423 | 2.1:-48956998 | MS.gene83623:CDS |
| TGATCGTGAATGTCCCTTGA+AGG | 0.550696 | 2.1:-48955635 | MS.gene83623:CDS |
| CACGAGCAACCTCTTCAGTT+CGG | 0.553183 | 2.1:+48956841 | None:intergenic |
| ACATTATAATTCTGATGAGA+AGG | 0.553822 | 2.1:-48953465 | MS.gene83623:CDS |
| CAATCTACTGCGATTCTCAA+AGG | 0.553970 | 2.1:-48953319 | MS.gene83623:CDS |
| TGAAACAGGAGTTGCTGCAA+GGG | 0.555136 | 2.1:-48955728 | MS.gene83623:CDS |
| CAATGATGATAAGGGTGGAG+GGG | 0.555405 | 2.1:-48956997 | MS.gene83623:CDS |
| AAAGAGCAGAAACAAGCAAT+CGG | 0.556601 | 2.1:-48953762 | MS.gene83623:CDS |
| CTTTACAACATCAGAATCAT+CGG | 0.558417 | 2.1:+48953136 | None:intergenic |
| AAGAAAGTGGAAGTCAAAAG+AGG | 0.562410 | 2.1:-48953181 | MS.gene83623:CDS |
| GAGGAGGAAGTACAATGAAG+AGG | 0.563248 | 2.1:+48956428 | None:intergenic |
| GAATCAGTCCTCCTCGTGGA+GGG | 0.567419 | 2.1:-48954187 | MS.gene83623:CDS |
| GGCATTATAGCATCCTTCAA+GGG | 0.567454 | 2.1:+48955622 | None:intergenic |
| TCTGGCCCTGATTGTTACAA+TGG | 0.571744 | 2.1:-48953602 | MS.gene83623:CDS |
| GAAATTATAAGAATAGGGAT+AGG | 0.573134 | 2.1:-48953580 | MS.gene83623:CDS |
| CAAGGCTGCAGAACTGAATG+AGG | 0.575016 | 2.1:-48956511 | MS.gene83623:CDS |
| GGATAAGACAAAGGATGCCA+TGG | 0.579111 | 2.1:+48956915 | None:intergenic |
| TGGGCAAGGATAGCATTCAA+AGG | 0.585876 | 2.1:+48955568 | None:intergenic |
| GCACTTTCAGGATTGTAACC+AGG | 0.587097 | 2.1:+48956534 | None:intergenic |
| GTGGAGAAGGAGAAGATGGA+GGG | 0.594975 | 2.1:-48957053 | None:intergenic |
| TGTTTACTCCTACCGTGCAT+AGG | 0.596727 | 2.1:+48953659 | None:intergenic |
| CAAAAGCACAAGAGGACACA+TGG | 0.598554 | 2.1:-48953497 | MS.gene83623:CDS |
| ATAAGTTGGTCAATAAATCA+GGG | 0.599830 | 2.1:+48953972 | None:intergenic |
| ATGAAACAGGAGTTGCTGCA+AGG | 0.600562 | 2.1:-48955729 | MS.gene83623:CDS |
| GGAATCAGTCCTCCTCGTGG+AGG | 0.602508 | 2.1:-48954188 | MS.gene83623:CDS |
| GGGCAAGGATAGCATTCAAA+GGG | 0.602594 | 2.1:+48955569 | None:intergenic |
| AGGAAGTACAATGAAGAGGA+AGG | 0.603174 | 2.1:+48956432 | None:intergenic |
| GATTATCATTTAAAACAGAA+GGG | 0.604720 | 2.1:-48953428 | MS.gene83623:CDS |
| ACCTGCTCTTCTGACTTCCA+CGG | 0.605075 | 2.1:+48953267 | None:intergenic |
| CCTACACAAACCAATCCTGA+TGG | 0.608975 | 2.1:-48956456 | MS.gene83623:CDS |
| GGAGTAAACATGGCAAGCGA+AGG | 0.610291 | 2.1:-48953646 | MS.gene83623:CDS |
| TCTCATCTCGAAGAAGGACA+AGG | 0.612012 | 2.1:-48956697 | MS.gene83623:CDS |
| ATCGGAAGAATAAGAACACT+CGG | 0.612070 | 2.1:+48952596 | None:intergenic |
| GACATATTTGATGAATATGG+AGG | 0.615915 | 2.1:-48954119 | MS.gene83623:intron |
| AGGGTGAGGAAGGAGGTGTG+AGG | 0.616162 | 2.1:-48957034 | MS.gene83623:CDS |
| TTAATTCCTAGGCCACCCCA+TGG | 0.620465 | 2.1:-48956320 | MS.gene83623:intron |
| ATGATCATCCTATGCACGGT+AGG | 0.621149 | 2.1:-48953667 | MS.gene83623:CDS |
| TTTAGTCATGATCGGTACCG+TGG | 0.624391 | 2.1:-48953284 | MS.gene83623:CDS |
| GACCTCAGTAAGATCTGTGT+GGG | 0.627972 | 2.1:+48955549 | None:intergenic |
| GATTATGATCATCCTATGCA+CGG | 0.629111 | 2.1:-48953671 | MS.gene83623:CDS |
| AGACGAAATCGGGTACTGCG+TGG | 0.632015 | 2.1:-48956962 | MS.gene83623:CDS |
| GATTCTGATGTTGAAAAGGA+TGG | 0.636313 | 2.1:-48952573 | MS.gene83623:CDS |
| TTACAATCCTGAAAGTGCCA+AGG | 0.645905 | 2.1:-48956529 | MS.gene83623:CDS |
| AGATTCAATGATGATAAGGG+TGG | 0.655372 | 2.1:-48957002 | MS.gene83623:CDS |
| ATGCACGGTAGGAGTAAACA+TGG | 0.659132 | 2.1:-48953656 | MS.gene83623:CDS |
| CAACCAGCAGATAGTTGCCG+AGG | 0.664296 | 2.1:-48954147 | MS.gene83623:CDS |
| CCAGGAATCAGTCCTCCTCG+TGG | 0.665856 | 2.1:-48954191 | MS.gene83623:CDS |
| TGACCTCAGTAAGATCTGTG+TGG | 0.672359 | 2.1:+48955548 | None:intergenic |
| GGTTTAAACCCTCCACGAGG+AGG | 0.673100 | 2.1:+48954179 | None:intergenic |
| TAATCATCAACGTCAACCCG+AGG | 0.674351 | 2.1:-48953372 | MS.gene83623:CDS |
| GACATTGACAGGGATGATCG+AGG | 0.688137 | 2.1:-48953533 | MS.gene83623:CDS |
| GGATGCTATAATGCCAAACG+AGG | 0.689339 | 2.1:-48955614 | MS.gene83623:CDS |
| TGAAGATCCTGACATTGACA+GGG | 0.700971 | 2.1:-48953543 | MS.gene83623:CDS |
| CTTTCAGGATTGTAACCAGG+AGG | 0.708694 | 2.1:+48956537 | None:intergenic |
| AGATTGTTGATGAATACTTG+TGG | 0.712769 | 2.1:+48953336 | None:intergenic |
| GGGAACTATGGTCACCAAAG+TGG | 0.723725 | 2.1:-48955658 | MS.gene83623:CDS |
| CGTTGATTAGGATAAGACAA+AGG | 0.725839 | 2.1:+48956906 | None:intergenic |
| TGCCCACACAGATCTTACTG+AGG | 0.747455 | 2.1:-48955551 | MS.gene83623:intron |
| TCTGGTTTAAACCCTCCACG+AGG | 0.791505 | 2.1:+48954176 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTTTTATTGTTTG+TGG | - | chr2.1:48954025-48954044 | MS.gene83623:intron | 10.0% |
| !!! | TACCTTTTATTATTGATTTT+GGG | - | chr2.1:48953567-48953586 | MS.gene83623:CDS | 15.0% |
| !!! | TTACCTTTTATTATTGATTT+TGG | - | chr2.1:48953566-48953585 | MS.gene83623:CDS | 15.0% |
| !!! | TTAGTAACTGAATATTTTTT+AGG | - | chr2.1:48953689-48953708 | MS.gene83623:CDS | 15.0% |
| !! | AACAAATCAAAATAAAAGGT+TGG | + | chr2.1:48952791-48952810 | None:intergenic | 20.0% |
| !! | ACAAATCAAAATAAAAGGTT+GGG | + | chr2.1:48952790-48952809 | None:intergenic | 20.0% |
| !! | ACAATGGAAATTATAAGAAT+AGG | - | chr2.1:48955856-48955875 | MS.gene83623:intron | 20.0% |
| !! | AGAAGGATAAAAGAAAAATA+TGG | - | chr2.1:48956434-48956453 | MS.gene83623:intron | 20.0% |
| !! | ATAAAAGGTAAAAAAATCTG+TGG | + | chr2.1:48953557-48953576 | None:intergenic | 20.0% |
| !! | ATATCGATAAATAGAATAGA+AGG | - | chr2.1:48954841-48954860 | MS.gene83623:intron | 20.0% |
| !! | ATCTAAGAAAAATAGAGTTA+AGG | - | chr2.1:48955587-48955606 | MS.gene83623:CDS | 20.0% |
| !! | CAATGGAAATTATAAGAATA+GGG | - | chr2.1:48955857-48955876 | MS.gene83623:intron | 20.0% |
| !! | TATAAAGGATAAAAAATGCA+AGG | + | chr2.1:48954454-48954473 | None:intergenic | 20.0% |
| !! | TTCCCAAAATCAATAATAAA+AGG | + | chr2.1:48953572-48953591 | None:intergenic | 20.0% |
| !!! | AATCGAATTTTTCATGTTTT+TGG | - | chr2.1:48952828-48952847 | MS.gene83623:CDS | 20.0% |
| !!! | AATGTTAAATGTTTAAGATG+TGG | - | chr2.1:48953763-48953782 | MS.gene83623:CDS | 20.0% |
| !!! | ATGTTAAATGTTTAAGATGT+GGG | - | chr2.1:48953764-48953783 | MS.gene83623:CDS | 20.0% |
| !!! | CTTCTGTTTTAAATGATAAT+CGG | + | chr2.1:48956015-48956034 | None:intergenic | 20.0% |
| !!! | GATTATCATTTAAAACAGAA+GGG | - | chr2.1:48956014-48956033 | MS.gene83623:intron | 20.0% |
| !!! | TTTTGGTTTTTTAGATAAGT+TGG | + | chr2.1:48955487-48955506 | None:intergenic | 20.0% |
| ! | AAAAGAATGATCAAAGTAGA+AGG | - | chr2.1:48956234-48956253 | MS.gene83623:CDS | 25.0% |
| ! | AAATTCCTACATTCAATTAC+TGG | + | chr2.1:48954352-48954371 | None:intergenic | 25.0% |
| ! | AAGAGATTCAATGATGATAA+GGG | - | chr2.1:48952437-48952456 | MS.gene83623:CDS | 25.0% |
| ! | AATAAAATGAGTTAAGACCT+CGG | - | chr2.1:48954899-48954918 | MS.gene83623:intron | 25.0% |
| ! | AATTACTAATTGACATACCT+TGG | + | chr2.1:48953230-48953249 | None:intergenic | 25.0% |
| ! | AATTTCCATTGTAACAATCA+GGG | + | chr2.1:48955848-48955867 | None:intergenic | 25.0% |
| ! | ACATTATAATTCTGATGAGA+AGG | - | chr2.1:48955977-48955996 | MS.gene83623:intron | 25.0% |
| ! | AGAAGGATAAAAGAAAAACA+TGG | - | chr2.1:48956341-48956360 | MS.gene83623:intron | 25.0% |
| ! | AGTTGATTATAAGACGAAAT+CGG | - | chr2.1:48952469-48952488 | MS.gene83623:CDS | 25.0% |
| ! | ATAAAAAATGCAAGGAACTA+TGG | + | chr2.1:48954446-48954465 | None:intergenic | 25.0% |
| ! | ATGATGAAGCAAAACTATAA+AGG | + | chr2.1:48954469-48954488 | None:intergenic | 25.0% |
| ! | ATTGAGAAAACCTGTAAAAT+CGG | + | chr2.1:48955439-48955458 | None:intergenic | 25.0% |
| ! | CAAATCAAAATAAAAGGTTG+GGG | + | chr2.1:48952789-48952808 | None:intergenic | 25.0% |
| ! | GAAATTATAAGAATAGGGAT+AGG | - | chr2.1:48955862-48955881 | MS.gene83623:intron | 25.0% |
| ! | GGGAAACAAATCAAAATAAA+AGG | + | chr2.1:48952795-48952814 | None:intergenic | 25.0% |
| ! | TAATTTCCATTGTAACAATC+AGG | + | chr2.1:48955849-48955868 | None:intergenic | 25.0% |
| ! | TTACTGGGAAAAAAAAAACA+AGG | + | chr2.1:48953046-48953065 | None:intergenic | 25.0% |
| ! | TTGCTTGATATCACATATTA+AGG | - | chr2.1:48953302-48953321 | MS.gene83623:CDS | 25.0% |
| ! | TTTCACAAACTAACTACATT+TGG | - | chr2.1:48954218-48954237 | MS.gene83623:CDS | 25.0% |
| !! | CGATTATCATTTAAAACAGA+AGG | - | chr2.1:48956013-48956032 | MS.gene83623:intron | 25.0% |
| !! | TTCTTCTTTTTGGACTTTTT+TGG | + | chr2.1:48955504-48955523 | None:intergenic | 25.0% |
| !! | TTTACAGGTTTTCTCAATAT+GGG | - | chr2.1:48955441-48955460 | MS.gene83623:intron | 25.0% |
| !! | TTTTACAGGTTTTCTCAATA+TGG | - | chr2.1:48955440-48955459 | MS.gene83623:intron | 25.0% |
| !! | TTTTCACTTCTATGATATGA+AGG | + | chr2.1:48956986-48957005 | None:intergenic | 25.0% |
| !!! | ATAAGTTGGTCAATAAATCA+GGG | + | chr2.1:48955473-48955492 | None:intergenic | 25.0% |
| !!! | ATATTTTTTAGGCATGAAAC+AGG | - | chr2.1:48953700-48953719 | MS.gene83623:CDS | 25.0% |
| !!! | ATGTAAGTTTTAGTCATGAT+CGG | - | chr2.1:48956150-48956169 | MS.gene83623:intron | 25.0% |
| !!! | ATTGACTTTGTTGTTTTGTT+TGG | - | chr2.1:48955190-48955209 | MS.gene83623:intron | 25.0% |
| !!! | GCATGCTAAATTTTAGTTTA+GGG | + | chr2.1:48955020-48955039 | None:intergenic | 25.0% |
| !!! | TATTATTGATTTTGGGAAGA+TGG | - | chr2.1:48953574-48953593 | MS.gene83623:CDS | 25.0% |
| !!! | TTATTTTTGAGCAGGAAAAA+TGG | - | chr2.1:48954687-48954706 | MS.gene83623:intron | 25.0% |
| !!! | TTGACTTTGTTGTTTTGTTT+GGG | - | chr2.1:48955191-48955210 | MS.gene83623:intron | 25.0% |
| !!! | TTTATAGTTTTGCTTCATCA+TGG | - | chr2.1:48954468-48954487 | MS.gene83623:intron | 25.0% |
| AAAAAAAACAAGGCAAAGTG+AGG | + | chr2.1:48953036-48953055 | None:intergenic | 30.0% | |
| AAAAATTTCCTGCTCAAAAC+AGG | + | chr2.1:48954750-48954769 | None:intergenic | 30.0% | |
| AAAAGAATGATCGAAGAAGA+AGG | - | chr2.1:48956696-48956715 | MS.gene83623:CDS | 30.0% | |
| AAAAGAATGATCGAAGTAGA+AGG | - | chr2.1:48956417-48956436 | MS.gene83623:intron | 30.0% | |
| AAATATGCGTTGTATCATGA+TGG | - | chr2.1:48954180-48954199 | MS.gene83623:CDS | 30.0% | |
| AAGTTCTTAAAAATGCACCA+AGG | - | chr2.1:48953210-48953229 | MS.gene83623:CDS | 30.0% | |
| AATATGCGTTGTATCATGAT+GGG | - | chr2.1:48954181-48954200 | MS.gene83623:CDS | 30.0% | |
| AATTAGAACCAGAACTGAAT+TGG | + | chr2.1:48952663-48952682 | None:intergenic | 30.0% | |
| ACTTCAAATTCTTCTTCAGT+TGG | + | chr2.1:48953194-48953213 | None:intergenic | 30.0% | |
| ACTTTCTAAACCAAAAACCA+TGG | - | chr2.1:48952510-48952529 | MS.gene83623:CDS | 30.0% | |
| AGAACTGAATTGGTTAAAAG+GGG | + | chr2.1:48952653-48952672 | None:intergenic | 30.0% | |
| AGAAGGATCAAAGAAAAACA+TGG | - | chr2.1:48956527-48956546 | MS.gene83623:CDS | 30.0% | |
| AGATAAAATCGTCTTGATAG+AGG | + | chr2.1:48954978-48954997 | None:intergenic | 30.0% | |
| AGGATCAAAGAAAAACATCA+CGG | - | chr2.1:48956902-48956921 | MS.gene83623:CDS | 30.0% | |
| CAAGAAATGAAAACCAATCA+CGG | + | chr2.1:48953078-48953097 | None:intergenic | 30.0% | |
| CAAGAGATTCAATGATGATA+AGG | - | chr2.1:48952436-48952455 | MS.gene83623:CDS | 30.0% | |
| CAGAACTGAATTGGTTAAAA+GGG | + | chr2.1:48952654-48952673 | None:intergenic | 30.0% | |
| CTGTGAGTATAATTGTTACT+TGG | - | chr2.1:48954064-48954083 | MS.gene83623:intron | 30.0% | |
| CTTTACAACATCAGAATCAT+CGG | + | chr2.1:48956309-48956328 | None:intergenic | 30.0% | |
| GACATATTTGATGAATATGG+AGG | - | chr2.1:48955323-48955342 | MS.gene83623:intron | 30.0% | |
| GAGGACATATTTGATGAATA+TGG | - | chr2.1:48955320-48955339 | MS.gene83623:intron | 30.0% | |
| GGAGAAGAAAAAAGAAGATA+TGG | - | chr2.1:48952952-48952971 | MS.gene83623:CDS | 30.0% | |
| GTAAAGCTGAACAAAAATTC+CGG | - | chr2.1:48954548-48954567 | MS.gene83623:intron | 30.0% | |
| GTACAATAATTGCTAGAAAC+AGG | + | chr2.1:48954399-48954418 | None:intergenic | 30.0% | |
| GTTGATTATAAGACGAAATC+GGG | - | chr2.1:48952470-48952489 | MS.gene83623:CDS | 30.0% | |
| TAAAAAAATCTGTGGTGATC+AGG | + | chr2.1:48953549-48953568 | None:intergenic | 30.0% | |
| TAAAGAATGATCGAAGTAGA+AGG | - | chr2.1:48956324-48956343 | MS.gene83623:intron | 30.0% | |
| TAAAGCTGAACAAAAATTCC+GGG | - | chr2.1:48954549-48954568 | MS.gene83623:intron | 30.0% | |
| TAGTAAAACAAACTCATAGC+TGG | + | chr2.1:48954794-48954813 | None:intergenic | 30.0% | |
| TATAAAGAGTCAAGTTCATC+AGG | - | chr2.1:48955630-48955649 | MS.gene83623:CDS | 30.0% | |
| TTGAGAAAACCTGTAAAATC+GGG | + | chr2.1:48955438-48955457 | None:intergenic | 30.0% | |
| ! | ACAACGCATATTTTCTTATC+AGG | + | chr2.1:48954173-48954192 | None:intergenic | 30.0% |
| ! | ACATATTAAGGAGTTTTGCT+TGG | - | chr2.1:48953314-48953333 | MS.gene83623:CDS | 30.0% |
| ! | AGAATATTCAAAAGCACAAG+AGG | - | chr2.1:48955937-48955956 | MS.gene83623:intron | 30.0% |
| ! | AGATTGTTGATGAATACTTG+TGG | + | chr2.1:48956109-48956128 | None:intergenic | 30.0% |
| ! | CTCAATCTCTAATTAGCTTA+AGG | - | chr2.1:48954300-48954319 | MS.gene83623:intron | 30.0% |
| ! | CTTTTCAACATCAGAATCAT+CGG | + | chr2.1:48956219-48956238 | None:intergenic | 30.0% |
| ! | CTTTTTGTGCTTCTTCTTTT+TGG | + | chr2.1:48955514-48955533 | None:intergenic | 30.0% |
| !! | AGAAATTTGCTGATCATACT+AGG | - | chr2.1:48953373-48953392 | MS.gene83623:CDS | 30.0% |
| !! | GATAAGTTGGTCAATAAATC+AGG | + | chr2.1:48955474-48955493 | None:intergenic | 30.0% |
| !! | TGTTTTAAATGATAATCGGC+AGG | + | chr2.1:48956011-48956030 | None:intergenic | 30.0% |
| !!! | GGCATGCTAAATTTTAGTTT+AGG | + | chr2.1:48955021-48955040 | None:intergenic | 30.0% |
| !!! | TATCAATATTGCCGACTTTT+GGG | + | chr2.1:48955163-48955182 | None:intergenic | 30.0% |
| !!! | TCTCGTTTAGTTTTTCTACT+TGG | + | chr2.1:48955732-48955751 | None:intergenic | 30.0% |
| !!! | TTATCAATATTGCCGACTTT+TGG | + | chr2.1:48955164-48955183 | None:intergenic | 30.0% |
| !!! | TTTTTGGTTTGTGTATGTGT+AGG | - | chr2.1:48952844-48952863 | MS.gene83623:CDS | 30.0% |
| AAAAGGATAGTCGAAGTAGA+AGG | - | chr2.1:48956510-48956529 | MS.gene83623:CDS | 35.0% | |
| AAAGAGCAGAAACAAGCAAT+CGG | - | chr2.1:48955680-48955699 | MS.gene83623:CDS | 35.0% | |
| AAAGCTGAACAAAAATTCCG+GGG | - | chr2.1:48954550-48954569 | MS.gene83623:intron | 35.0% | |
| AAGAAAGTGGAAGTCAAAAG+AGG | - | chr2.1:48956261-48956280 | MS.gene83623:CDS | 35.0% | |
| AAGCCAAATTTGCACGAATT+TGG | - | chr2.1:48954874-48954893 | MS.gene83623:intron | 35.0% | |
| AATCCCCAAAAAAGAGATCT+AGG | + | chr2.1:48953506-48953525 | None:intergenic | 35.0% | |
| AATTAAGCCAAACACAATGC+AGG | + | chr2.1:48953996-48954015 | None:intergenic | 35.0% | |
| AATTCTGATGAGAAGGATTC+TGG | - | chr2.1:48955984-48956003 | MS.gene83623:intron | 35.0% | |
| AGATTCAATGATGATAAGGG+TGG | - | chr2.1:48952440-48952459 | MS.gene83623:CDS | 35.0% | |
| AGCATAGAGCAATAGACAAA+AGG | - | chr2.1:48954713-48954732 | MS.gene83623:intron | 35.0% | |
| AGTAGAAGGATCAAAGAAAG+TGG | - | chr2.1:48956248-48956267 | MS.gene83623:CDS | 35.0% | |
| ATACTGCAAAATGCAACAAG+AGG | + | chr2.1:48952693-48952712 | None:intergenic | 35.0% | |
| ATCAAATATGTCCTCTTCCT+CGG | + | chr2.1:48955315-48955334 | None:intergenic | 35.0% | |
| ATCACGGAAAAACAGATTAC+TGG | + | chr2.1:48953062-48953081 | None:intergenic | 35.0% | |
| ATCGGAAGAATAAGAACACT+CGG | + | chr2.1:48956849-48956868 | None:intergenic | 35.0% | |
| ATTTATGCCTGCATTGTGTT+TGG | - | chr2.1:48953986-48954005 | MS.gene83623:CDS | 35.0% | |
| CAATAATTGCTAGAAACAGG+TGG | + | chr2.1:48954396-48954415 | None:intergenic | 35.0% | |
| CAATTTAGTCCTTGACATTG+TGG | - | chr2.1:48953955-48953974 | MS.gene83623:CDS | 35.0% | |
| CCAGAACTGAATTGGTTAAA+AGG | + | chr2.1:48952655-48952674 | None:intergenic | 35.0% | |
| CGATGATTCTGATGTTGAAA+AGG | - | chr2.1:48956400-48956419 | MS.gene83623:intron | 35.0% | |
| GATTATGATCATCCTATGCA+CGG | - | chr2.1:48955771-48955790 | MS.gene83623:intron | 35.0% | |
| GATTCTGATGTTGAAAAGGA+TGG | - | chr2.1:48956869-48956888 | MS.gene83623:CDS | 35.0% | |
| GTACTGAAATCTGTAGTATG+AGG | - | chr2.1:48953475-48953494 | MS.gene83623:CDS | 35.0% | |
| GTCTGAATCACTTAATTCCT+AGG | - | chr2.1:48953111-48953130 | MS.gene83623:CDS | 35.0% | |
| TCAAACTCTCCTTAGTCTAA+AGG | + | chr2.1:48954947-48954966 | None:intergenic | 35.0% | |
| TCACGGAAAAACAGATTACT+GGG | + | chr2.1:48953061-48953080 | None:intergenic | 35.0% | |
| TCTTATTCTTCCGATGATTC+TGG | - | chr2.1:48956389-48956408 | MS.gene83623:intron | 35.0% | |
| TGAATTGGTTAAAAGGGGAA+GGG | + | chr2.1:48952648-48952667 | None:intergenic | 35.0% | |
| TGCAACCAGTAATTGAATGT+AGG | - | chr2.1:48954344-48954363 | MS.gene83623:intron | 35.0% | |
| TGTAAAATCGGGAGTAATTG+TGG | + | chr2.1:48955427-48955446 | None:intergenic | 35.0% | |
| TGTCCAAATTCGTGCAAATT+TGG | + | chr2.1:48954880-48954899 | None:intergenic | 35.0% | |
| TTCAATCTACTTTCCTCGTT+TGG | + | chr2.1:48953844-48953863 | None:intergenic | 35.0% | |
| TTTGTTCAGCAATCCACTTA+CGG | + | chr2.1:48952562-48952581 | None:intergenic | 35.0% | |
| ! | AAGGCTTTTCTCTGTTATGT+TGG | + | chr2.1:48956967-48956986 | None:intergenic | 35.0% |
| ! | ACAATTACTCCCGATTTTAC+AGG | - | chr2.1:48955426-48955445 | MS.gene83623:intron | 35.0% |
| ! | CCTTTTAACCAATTCAGTTC+TGG | - | chr2.1:48952652-48952671 | MS.gene83623:CDS | 35.0% |
| ! | CGTTGATTAGGATAAGACAA+AGG | + | chr2.1:48952539-48952558 | None:intergenic | 35.0% |
| ! | CTTTTCAACGTCAGAATCAT+CGG | + | chr2.1:48956495-48956514 | None:intergenic | 35.0% |
| ! | TACTGGTTGCATGTGAATTT+AGG | + | chr2.1:48954335-48954354 | None:intergenic | 35.0% |
| ! | TCTAATTAGCTTAAGGTCAC+CGG | - | chr2.1:48954307-48954326 | MS.gene83623:intron | 35.0% |
| ! | TGTTTAAGATGTGGGAACTA+TGG | - | chr2.1:48953772-48953791 | MS.gene83623:CDS | 35.0% |
| !! | AATGATGCAGCCTCTAAAAT+GGG | - | chr2.1:48955214-48955233 | MS.gene83623:intron | 35.0% |
| !! | GTAATCTGTTTTTCCGTGAT+TGG | - | chr2.1:48953062-48953081 | MS.gene83623:CDS | 35.0% |
| !! | GTAATTGTGGTTGATTTGGT+TGG | + | chr2.1:48955414-48955433 | None:intergenic | 35.0% |
| !! | TAATTCTTGCTTTTCTTGCG+AGG | - | chr2.1:48953245-48953264 | MS.gene83623:CDS | 35.0% |
| !! | TAGTGGCTCAATTTGCTATT+GGG | - | chr2.1:48955059-48955078 | MS.gene83623:intron | 35.0% |
| !! | TTGATTTGTTTCCCCTATGT+GGG | - | chr2.1:48952801-48952820 | MS.gene83623:CDS | 35.0% |
| !! | TTTGATTTGTTTCCCCTATG+TGG | - | chr2.1:48952800-48952819 | MS.gene83623:CDS | 35.0% |
| !!! | ATCAATATTGCCGACTTTTG+GGG | + | chr2.1:48955162-48955181 | None:intergenic | 35.0% |
| !!! | CATCCTAGATCTCTTTTTTG+GGG | - | chr2.1:48953500-48953519 | MS.gene83623:CDS | 35.0% |
| !!! | CTTGCGAGGATTAGTTTTTA+TGG | - | chr2.1:48953259-48953278 | MS.gene83623:CDS | 35.0% |
| !!! | CTTTCCATGATCTTTTTCAG+AGG | + | chr2.1:48955664-48955683 | None:intergenic | 35.0% |
| !!! | GAGCAGGAAATTTTTTTCGT+AGG | - | chr2.1:48954755-48954774 | MS.gene83623:intron | 35.0% |
| !!! | GCATCCTAGATCTCTTTTTT+GGG | - | chr2.1:48953499-48953518 | MS.gene83623:CDS | 35.0% |
| !!! | TGCATCCTAGATCTCTTTTT+TGG | - | chr2.1:48953498-48953517 | MS.gene83623:CDS | 35.0% |
| !!! | TGGTGGCATTCTTTTTAGTT+AGG | - | chr2.1:48953279-48953298 | MS.gene83623:CDS | 35.0% |
| AAAAACAAGGCAAAGTGAGG+AGG | + | chr2.1:48953033-48953052 | None:intergenic | 40.0% | |
| AAAAGGATGGTCGAAGTAGA+AGG | - | chr2.1:48956882-48956901 | MS.gene83623:CDS | 40.0% | |
| AAACATCACGGTATGCTTGA+TGG | - | chr2.1:48956914-48956933 | MS.gene83623:CDS | 40.0% | |
| AACACAAACTCATCAGAGAC+TGG | + | chr2.1:48954506-48954525 | None:intergenic | 40.0% | |
| AATGAGTTAAGACCTCGGAA+AGG | - | chr2.1:48954904-48954923 | MS.gene83623:intron | 40.0% | |
| ACACAAACTCATCAGAGACT+GGG | + | chr2.1:48954505-48954524 | None:intergenic | 40.0% | |
| ACAGGGAGAAATGGTATTCT+CGG | + | chr2.1:48954258-48954277 | None:intergenic | 40.0% | |
| AGAGCAATAGACAAAAGGCT+GGG | - | chr2.1:48954718-48954737 | MS.gene83623:intron | 40.0% | |
| AGCAGCTATTGCATTCAGAA+AGG | - | chr2.1:48955535-48955554 | MS.gene83623:intron | 40.0% | |
| ATGGAGAGAAGAAAAAACCG+AGG | - | chr2.1:48953141-48953160 | MS.gene83623:CDS | 40.0% | |
| CAATCTACTGCGATTCTCAA+AGG | - | chr2.1:48956123-48956142 | MS.gene83623:intron | 40.0% | |
| CCTGCTCAAAAATAAACCCT+TGG | + | chr2.1:48954682-48954701 | None:intergenic | 40.0% | |
| CGATGATTCTGACGTTGAAA+AGG | - | chr2.1:48956493-48956512 | MS.gene83623:CDS | 40.0% | |
| CTACGAAAGACATTCTTGGA+AGG | + | chr2.1:48955042-48955061 | None:intergenic | 40.0% | |
| CTGAATTGGTTAAAAGGGGA+AGG | + | chr2.1:48952649-48952668 | None:intergenic | 40.0% | |
| GAAAGGAAAAATTCCCTCAC+AGG | - | chr2.1:48954921-48954940 | MS.gene83623:intron | 40.0% | |
| GCAGCTATTGCATTCAGAAA+GGG | - | chr2.1:48955536-48955555 | MS.gene83623:intron | 40.0% | |
| GGCATTATAGCATCCTTCAA+GGG | + | chr2.1:48953823-48953842 | None:intergenic | 40.0% | |
| GGGAGTAATTGTGGTTGATT+TGG | + | chr2.1:48955418-48955437 | None:intergenic | 40.0% | |
| GTCCAAGATCCTAGTATGAT+CGG | + | chr2.1:48953385-48953404 | None:intergenic | 40.0% | |
| GTCTCTGATGAGTTTGTGTT+TGG | - | chr2.1:48954506-48954525 | MS.gene83623:intron | 40.0% | |
| TAAAAGGTTGGGGTGCAAAA+TGG | + | chr2.1:48952779-48952798 | None:intergenic | 40.0% | |
| TAGAGCAATAGACAAAAGGC+TGG | - | chr2.1:48954717-48954736 | MS.gene83623:intron | 40.0% | |
| TCAATGATGATAAGGGTGGA+GGG | - | chr2.1:48952444-48952463 | MS.gene83623:CDS | 40.0% | |
| TCATGCTTCAAGAAAGAGTG+TGG | - | chr2.1:48954619-48954638 | MS.gene83623:intron | 40.0% | |
| TCCAAGAATGTCTTTCGTAG+TGG | - | chr2.1:48955042-48955061 | MS.gene83623:intron | 40.0% | |
| TGAAGATCCTGACATTGACA+GGG | - | chr2.1:48955899-48955918 | MS.gene83623:intron | 40.0% | |
| TGAAGCATGAGTCTCTAAAC+TGG | + | chr2.1:48954609-48954628 | None:intergenic | 40.0% | |
| TGCTGATCATACTAGGATCT+TGG | - | chr2.1:48953380-48953399 | MS.gene83623:CDS | 40.0% | |
| TGGCATTATAGCATCCTTCA+AGG | + | chr2.1:48953824-48953843 | None:intergenic | 40.0% | |
| TTAGGGTGCAGATAATCTGA+AGG | + | chr2.1:48955003-48955022 | None:intergenic | 40.0% | |
| TTCAATGATGATAAGGGTGG+AGG | - | chr2.1:48952443-48952462 | MS.gene83623:CDS | 40.0% | |
| TTGAGATTTCAGACTGACAG+AGG | + | chr2.1:48954285-48954304 | None:intergenic | 40.0% | |
| TTGCATGTGAATTTAGGTCC+CGG | + | chr2.1:48954329-48954348 | None:intergenic | 40.0% | |
| TTGCGAATTTCGACTCCAAA+AGG | + | chr2.1:48953745-48953764 | None:intergenic | 40.0% | |
| TTGTCGTGTCAGAAATAGAG+TGG | + | chr2.1:48953604-48953623 | None:intergenic | 40.0% | |
| TTTATGTATGTTCGTCCTCC+TGG | - | chr2.1:48952890-48952909 | MS.gene83623:CDS | 40.0% | |
| TTTGGTTGGACAAACATCTG+AGG | + | chr2.1:48955400-48955419 | None:intergenic | 40.0% | |
| ! | AACCTGTTTGCTACACTTCA+CGG | + | chr2.1:48954657-48954676 | None:intergenic | 40.0% |
| ! | ACAAAGGATGCCATGGTTTT+TGG | + | chr2.1:48952523-48952542 | None:intergenic | 40.0% |
| ! | AGGAAGTACAATGAAGAGGA+AGG | + | chr2.1:48953013-48953032 | None:intergenic | 40.0% |
| ! | CTAATTAGCTTAAGGTCACC+GGG | - | chr2.1:48954308-48954327 | MS.gene83623:intron | 40.0% |
| ! | CTTTTCAACGCCAGAATCAT+CGG | + | chr2.1:48956774-48956793 | None:intergenic | 40.0% |
| ! | GAATGATGCAGCCTCTAAAA+TGG | - | chr2.1:48955213-48955232 | MS.gene83623:intron | 40.0% |
| ! | GGATATGAAGCACTTTCTCT+TGG | + | chr2.1:48954425-48954444 | None:intergenic | 40.0% |
| ! | TCTGCCTCTGAAAAAGATCA+TGG | - | chr2.1:48955657-48955676 | MS.gene83623:CDS | 40.0% |
| ! | TGTATCGATCCACAATGTCA+AGG | + | chr2.1:48953967-48953986 | None:intergenic | 40.0% |
| ! | TTGCATTTTGCAGTATGCTC+AGG | - | chr2.1:48952697-48952716 | MS.gene83623:CDS | 40.0% |
| ! | TTTTTATAGCACCAGCCACT+TGG | - | chr2.1:48953417-48953436 | MS.gene83623:CDS | 40.0% |
| !! | AAGGCATTCCTTTTCATCTG+AGG | - | chr2.1:48955815-48955834 | MS.gene83623:intron | 40.0% |
| !! | AGGGAAGCATCTTTAGATGA+TGG | - | chr2.1:48955555-48955574 | MS.gene83623:CDS | 40.0% |
| !! | CTATTTCTGACACGACAATG+TGG | - | chr2.1:48953606-48953625 | MS.gene83623:CDS | 40.0% |
| !! | GTAGTGGCTCAATTTGCTAT+TGG | - | chr2.1:48955058-48955077 | MS.gene83623:intron | 40.0% |
| !! | TTACAATCCTGAAAGTGCCA+AGG | - | chr2.1:48952913-48952932 | MS.gene83623:CDS | 40.0% |
| !! | TTGGTTTGTGTATGTGTAGG+TGG | - | chr2.1:48952847-48952866 | MS.gene83623:CDS | 40.0% |
| !!! | CCAAGGGTTTATTTTTGAGC+AGG | - | chr2.1:48954679-48954698 | MS.gene83623:intron | 40.0% |
| !!! | CGGTTTTTTCTTCTCTCCAT+GGG | + | chr2.1:48953141-48953160 | None:intergenic | 40.0% |
| !!! | CTTTTTTGGGGATTGATGCA+GGG | - | chr2.1:48953512-48953531 | MS.gene83623:CDS | 40.0% |
| !!! | GCGAGGATTAGTTTTTATGG+TGG | - | chr2.1:48953262-48953281 | MS.gene83623:CDS | 40.0% |
| !!! | GGTTTTTTCTTCTCTCCATG+GGG | + | chr2.1:48953140-48953159 | None:intergenic | 40.0% |
| !!! | GTGGCTGCTTATTTTATCCT+CGG | + | chr2.1:48956090-48956109 | None:intergenic | 40.0% |
| !!! | TCAATATTGCCGACTTTTGG+GGG | + | chr2.1:48955161-48955180 | None:intergenic | 40.0% |
| !!! | TCGGTTTTTTCTTCTCTCCA+TGG | + | chr2.1:48953142-48953161 | None:intergenic | 40.0% |
| !!! | TCTTTTTTGGGGATTGATGC+AGG | - | chr2.1:48953511-48953530 | MS.gene83623:CDS | 40.0% |
| !!! | TGGCTGCTTATTTTATCCTC+GGG | + | chr2.1:48956089-48956108 | None:intergenic | 40.0% |
| AATGAAGAGGAAGGTCCATC+AGG | + | chr2.1:48953004-48953023 | None:intergenic | 45.0% | |
| AATTCGATTGCAGCCCACAT+AGG | + | chr2.1:48952817-48952836 | None:intergenic | 45.0% | |
| AGACTGACAGAGGAAAGACA+GGG | + | chr2.1:48954275-48954294 | None:intergenic | 45.0% | |
| AGAGGAAAGACAGGGAGAAA+TGG | + | chr2.1:48954267-48954286 | None:intergenic | 45.0% | |
| AGCAATAGACAAAAGGCTGG+GGG | - | chr2.1:48954720-48954739 | MS.gene83623:intron | 45.0% | |
| ATCCTAATCAACGCCGTAAG+TGG | - | chr2.1:48952546-48952565 | MS.gene83623:CDS | 45.0% | |
| ATGAAACAGGAGTTGCTGCA+AGG | - | chr2.1:48953713-48953732 | MS.gene83623:CDS | 45.0% | |
| ATGATCATCCTATGCACGGT+AGG | - | chr2.1:48955775-48955794 | MS.gene83623:intron | 45.0% | |
| ATGCACGGTAGGAGTAAACA+TGG | - | chr2.1:48955786-48955805 | MS.gene83623:intron | 45.0% | |
| ATTCGATTGCAGCCCACATA+GGG | + | chr2.1:48952816-48952835 | None:intergenic | 45.0% | |
| CAATGATGATAAGGGTGGAG+GGG | - | chr2.1:48952445-48952464 | MS.gene83623:CDS | 45.0% | |
| CCTACACAAACCAATCCTGA+TGG | - | chr2.1:48952986-48953005 | MS.gene83623:CDS | 45.0% | |
| CTCGAAGAAGGACAAGGAAA+AGG | - | chr2.1:48952751-48952770 | MS.gene83623:CDS | 45.0% | |
| CTGAACAAAAATTCCGGGGA+GGG | - | chr2.1:48954554-48954573 | MS.gene83623:intron | 45.0% | |
| CTGAAGATCCTGACATTGAC+AGG | - | chr2.1:48955898-48955917 | MS.gene83623:intron | 45.0% | |
| CTTAGTCTAAAGGCCTGTGA+GGG | + | chr2.1:48954937-48954956 | None:intergenic | 45.0% | |
| CTTTCAGGATTGTAACCAGG+AGG | + | chr2.1:48952908-48952927 | None:intergenic | 45.0% | |
| GACATCTCTCATCTCGAAGA+AGG | - | chr2.1:48952739-48952758 | MS.gene83623:CDS | 45.0% | |
| GACATTCACGATCACCACTT+TGG | + | chr2.1:48953801-48953820 | None:intergenic | 45.0% | |
| GACCTCAGTAAGATCTGTGT+GGG | + | chr2.1:48953896-48953915 | None:intergenic | 45.0% | |
| GAGCAATAGACAAAAGGCTG+GGG | - | chr2.1:48954719-48954738 | MS.gene83623:intron | 45.0% | |
| GATCCTAGTATGATCGGCAA+TGG | + | chr2.1:48953449-48953468 | None:intergenic | 45.0% | |
| GCACAAAGATCCAGAATCCA+GGG | + | chr2.1:48954587-48954606 | None:intergenic | 45.0% | |
| GCACTTTCAGGATTGTAACC+AGG | + | chr2.1:48952911-48952930 | None:intergenic | 45.0% | |
| GCCACTACGAAAGACATTCT+TGG | + | chr2.1:48955046-48955065 | None:intergenic | 45.0% | |
| GGATAAGACAAAGGATGCCA+TGG | + | chr2.1:48952530-48952549 | None:intergenic | 45.0% | |
| GGATGCTATAATGCCAAACG+AGG | - | chr2.1:48953828-48953847 | MS.gene83623:CDS | 45.0% | |
| GGGCAAGGATAGCATTCAAA+GGG | + | chr2.1:48953876-48953895 | None:intergenic | 45.0% | |
| GTAGCAAACAGGTTGTCCAA+GGG | - | chr2.1:48954663-48954682 | MS.gene83623:intron | 45.0% | |
| TAATCATCAACGTCAACCCG+AGG | - | chr2.1:48956070-48956089 | MS.gene83623:intron | 45.0% | |
| TCACCATTGCCGATCATACT+AGG | - | chr2.1:48953443-48953462 | MS.gene83623:CDS | 45.0% | |
| TCTCATCTCGAAGAAGGACA+AGG | - | chr2.1:48952745-48952764 | MS.gene83623:CDS | 45.0% | |
| TCTGGCCCTGATTGTTACAA+TGG | - | chr2.1:48955840-48955859 | MS.gene83623:intron | 45.0% | |
| TGAAACAGGAGTTGCTGCAA+GGG | - | chr2.1:48953714-48953733 | MS.gene83623:CDS | 45.0% | |
| TGACCTCAGTAAGATCTGTG+TGG | + | chr2.1:48953897-48953916 | None:intergenic | 45.0% | |
| TGATCGTGAATGTCCCTTGA+AGG | - | chr2.1:48953807-48953826 | MS.gene83623:CDS | 45.0% | |
| TGCCGATCATACTAGGATCT+TGG | - | chr2.1:48953450-48953469 | MS.gene83623:CDS | 45.0% | |
| TGGGCAAGGATAGCATTCAA+AGG | + | chr2.1:48953877-48953896 | None:intergenic | 45.0% | |
| TGTAGCAAACAGGTTGTCCA+AGG | - | chr2.1:48954662-48954681 | MS.gene83623:intron | 45.0% | |
| TGTTTACTCCTACCGTGCAT+AGG | + | chr2.1:48955786-48955805 | None:intergenic | 45.0% | |
| TTTAGTCATGATCGGTACCG+TGG | - | chr2.1:48956158-48956177 | MS.gene83623:intron | 45.0% | |
| ! | AAACATCTGAGGCGTCATCA+AGG | + | chr2.1:48955389-48955408 | None:intergenic | 45.0% |
| ! | ACCTGTTTGCTACACTTCAC+GGG | + | chr2.1:48954656-48954675 | None:intergenic | 45.0% |
| ! | CAAAAGCACAAGAGGACACA+TGG | - | chr2.1:48955945-48955964 | MS.gene83623:intron | 45.0% |
| ! | CCGAAAACATCTTTTGGCCT+CGG | + | chr2.1:48953161-48953180 | None:intergenic | 45.0% |
| ! | CCGAGGCCAAAAGATGTTTT+CGG | - | chr2.1:48953158-48953177 | MS.gene83623:CDS | 45.0% |
| ! | CGATGATTCTGGCGTTGAAA+AGG | - | chr2.1:48956772-48956791 | MS.gene83623:intron | 45.0% |
| ! | GAGGAGGAAGTACAATGAAG+AGG | + | chr2.1:48953017-48953036 | None:intergenic | 45.0% |
| ! | GAGGGAATTTTTCCTTTCCG+AGG | + | chr2.1:48954919-48954938 | None:intergenic | 45.0% |
| ! | TCCTTTTCATCTGAGGAGTC+TGG | - | chr2.1:48955822-48955841 | MS.gene83623:intron | 45.0% |
| ! | TGCTTGAGCTCCCATTTTAG+AGG | + | chr2.1:48955227-48955246 | None:intergenic | 45.0% |
| ! | TTTTTCTTCTCTCCATGGGG+TGG | + | chr2.1:48953137-48953156 | None:intergenic | 45.0% |
| !! | ATCCACTTACGGCGTTGATT+AGG | + | chr2.1:48952551-48952570 | None:intergenic | 45.0% |
| !! | CCATCAGGATTGGTTTGTGT+AGG | + | chr2.1:48952989-48953008 | None:intergenic | 45.0% |
| !! | CTTCTTCAGTTGGTAGAGCA+CGG | + | chr2.1:48953184-48953203 | None:intergenic | 45.0% |
| !! | GTTAAAAGGGGAAGGGTATC+AGG | + | chr2.1:48952641-48952660 | None:intergenic | 45.0% |
| AACTGAAGAGGTTGCTCGTG+AGG | - | chr2.1:48952604-48952623 | MS.gene83623:CDS | 50.0% | |
| AATGGTGATCTCCAAGTGGC+TGG | + | chr2.1:48953431-48953450 | None:intergenic | 50.0% | |
| ACCCGTGAAGTGTAGCAAAC+AGG | - | chr2.1:48954652-48954671 | MS.gene83623:intron | 50.0% | |
| ACCTGCTCTTCTGACTTCCA+CGG | + | chr2.1:48956178-48956197 | None:intergenic | 50.0% | |
| AGAGGAAGGTCCATCAGGAT+TGG | + | chr2.1:48952999-48953018 | None:intergenic | 50.0% | |
| CAAGGCTGCAGAACTGAATG+AGG | - | chr2.1:48952931-48952950 | MS.gene83623:CDS | 50.0% | |
| CACGAGCAACCTCTTCAGTT+CGG | + | chr2.1:48952604-48952623 | None:intergenic | 50.0% | |
| CAGACTGACAGAGGAAAGAC+AGG | + | chr2.1:48954276-48954295 | None:intergenic | 50.0% | |
| CAGTAAGATCTGTGTGGGCA+AGG | + | chr2.1:48953891-48953910 | None:intergenic | 50.0% | |
| CCTCACAGGCCTTTAGACTA+AGG | - | chr2.1:48954935-48954954 | MS.gene83623:intron | 50.0% | |
| CCTTAGTCTAAAGGCCTGTG+AGG | + | chr2.1:48954938-48954957 | None:intergenic | 50.0% | |
| CGATCATCCCTGTCAATGTC+AGG | + | chr2.1:48955909-48955928 | None:intergenic | 50.0% | |
| CTCATTCAGTTCTGCAGCCT+TGG | + | chr2.1:48952933-48952952 | None:intergenic | 50.0% | |
| GACATTGACAGGGATGATCG+AGG | - | chr2.1:48955909-48955928 | MS.gene83623:intron | 50.0% | |
| GCCAGACTCCTCAGATGAAA+AGG | + | chr2.1:48955826-48955845 | None:intergenic | 50.0% | |
| GCTGAACAAAAATTCCGGGG+AGG | - | chr2.1:48954553-48954572 | MS.gene83623:intron | 50.0% | |
| GGAGTAAACATGGCAAGCGA+AGG | - | chr2.1:48955796-48955815 | MS.gene83623:intron | 50.0% | |
| GGCACAAAGATCCAGAATCC+AGG | + | chr2.1:48954588-48954607 | None:intergenic | 50.0% | |
| GGGAACTATGGTCACCAAAG+TGG | - | chr2.1:48953784-48953803 | MS.gene83623:CDS | 50.0% | |
| TGCCCACACAGATCTTACTG+AGG | - | chr2.1:48953891-48953910 | MS.gene83623:CDS | 50.0% | |
| TTAATTCCTAGGCCACCCCA+TGG | - | chr2.1:48953122-48953141 | MS.gene83623:CDS | 50.0% | |
| TTCGATTGCAGCCCACATAG+GGG | + | chr2.1:48952815-48952834 | None:intergenic | 50.0% | |
| ! | GCACGGCCGAAAACATCTTT+TGG | + | chr2.1:48953167-48953186 | None:intergenic | 50.0% |
| ! | GCTGCAAGGGCAAAACCTTT+TGG | - | chr2.1:48953727-48953746 | MS.gene83623:CDS | 50.0% |
| ! | GGGAGATTTTCCCTGGATTC+TGG | - | chr2.1:48954574-48954593 | MS.gene83623:intron | 50.0% |
| ! | TCGGCAACTATCTGCTGGTT+GGG | + | chr2.1:48955296-48955315 | None:intergenic | 50.0% |
| ! | TCTGGTTTAAACCCTCCACG+AGG | + | chr2.1:48955269-48955288 | None:intergenic | 50.0% |
| ACCGTGGAAGTCAGAAGAGC+AGG | - | chr2.1:48956174-48956193 | MS.gene83623:intron | 55.0% | |
| ACGTGAACGCCGAACTGAAG+AGG | - | chr2.1:48952592-48952611 | MS.gene83623:CDS | 55.0% | |
| CAACCAGCAGATAGTTGCCG+AGG | - | chr2.1:48955295-48955314 | MS.gene83623:intron | 55.0% | |
| CGGCAATGGTGATCTCCAAG+TGG | + | chr2.1:48953435-48953454 | None:intergenic | 55.0% | |
| CTCGGCAACTATCTGCTGGT+TGG | + | chr2.1:48955297-48955316 | None:intergenic | 55.0% | |
| CTTCCTCGGCAACTATCTGC+TGG | + | chr2.1:48955301-48955320 | None:intergenic | 55.0% | |
| GAATCAGTCCTCCTCGTGGA+GGG | - | chr2.1:48955255-48955274 | MS.gene83623:intron | 55.0% | |
| GCAGATAGTTGCCGAGGAAG+AGG | - | chr2.1:48955301-48955320 | MS.gene83623:intron | 55.0% | |
| GGTTTAAACCCTCCACGAGG+AGG | + | chr2.1:48955266-48955285 | None:intergenic | 55.0% | |
| TCTGCAGCCTTGGCACTTTC+AGG | + | chr2.1:48952923-48952942 | None:intergenic | 55.0% | |
| TTCCCCTCTCCCCCAAAAGT+CGG | - | chr2.1:48955149-48955168 | MS.gene83623:intron | 55.0% | |
| ! | AGACGAAATCGGGTACTGCG+TGG | - | chr2.1:48952480-48952499 | MS.gene83623:CDS | 55.0% |
| ! | CGGCAACTATCTGCTGGTTG+GGG | + | chr2.1:48955295-48955314 | None:intergenic | 55.0% |
| !! | GGGGAAAGCCTGTTTTGAGC+AGG | - | chr2.1:48954739-48954758 | MS.gene83623:intron | 55.0% |
| !!! | ATTGCCGACTTTTGGGGGAG+AGG | + | chr2.1:48955156-48955175 | None:intergenic | 55.0% |
| !!! | TTGCCGACTTTTGGGGGAGA+GGG | + | chr2.1:48955155-48955174 | None:intergenic | 55.0% |
| CCAGGAATCAGTCCTCCTCG+TGG | - | chr2.1:48955251-48955270 | MS.gene83623:intron | 60.0% | |
| CCAGGGAAAATCTCCCTCCC+CGG | + | chr2.1:48954570-48954589 | None:intergenic | 60.0% | |
| GAGGTTGCTCGTGAGGCAAG+TGG | - | chr2.1:48952611-48952630 | MS.gene83623:CDS | 60.0% | |
| GGAATCAGTCCTCCTCGTGG+AGG | - | chr2.1:48955254-48955273 | MS.gene83623:intron | 60.0% | |
| TGGGAGCTCAAGCAGAAGCC+AGG | - | chr2.1:48955233-48955252 | MS.gene83623:intron | 60.0% | |
| TTCTCTCCATGGGGTGGCCT+AGG | + | chr2.1:48953131-48953150 | None:intergenic | 60.0% | |
| ! | AGGGTGAGGAAGGAGGTGTG+AGG | - | chr2.1:48952408-48952427 | MS.gene83623:CDS | 60.0% |
| ! | ATCTGCTGGTTGGGGTCGTC+TGG | + | chr2.1:48955287-48955306 | None:intergenic | 60.0% |
| ! | CCACGAGGAGGACTGATTCC+TGG | + | chr2.1:48955254-48955273 | None:intergenic | 60.0% |
| !!! | TGCCGACTTTTGGGGGAGAG+GGG | + | chr2.1:48955154-48955173 | None:intergenic | 60.0% |
| ! | CCGGGGAGGGAGATTTTCCC+TGG | - | chr2.1:48954567-48954586 | MS.gene83623:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 48952404 | 48957060 | 48952404 | ID=MS.gene83623 |
| chr2.1 | mRNA | 48952404 | 48957060 | 48952404 | ID=MS.gene83623.t1;Parent=MS.gene83623 |
| chr2.1 | exon | 48956851 | 48957060 | 48956851 | ID=MS.gene83623.t1.exon1;Parent=MS.gene83623.t1 |
| chr2.1 | CDS | 48956851 | 48957060 | 48956851 | ID=cds.MS.gene83623.t1;Parent=MS.gene83623.t1 |
| chr2.1 | exon | 48956692 | 48956754 | 48956692 | ID=MS.gene83623.t1.exon2;Parent=MS.gene83623.t1 |
| chr2.1 | CDS | 48956692 | 48956754 | 48956692 | ID=cds.MS.gene83623.t1;Parent=MS.gene83623.t1 |
| chr2.1 | exon | 48956441 | 48956598 | 48956441 | ID=MS.gene83623.t1.exon3;Parent=MS.gene83623.t1 |
| chr2.1 | CDS | 48956441 | 48956598 | 48956441 | ID=cds.MS.gene83623.t1;Parent=MS.gene83623.t1 |
| chr2.1 | exon | 48956233 | 48956331 | 48956233 | ID=MS.gene83623.t1.exon4;Parent=MS.gene83623.t1 |
| chr2.1 | CDS | 48956233 | 48956331 | 48956233 | ID=cds.MS.gene83623.t1;Parent=MS.gene83623.t1 |
| chr2.1 | exon | 48955552 | 48955753 | 48955552 | ID=MS.gene83623.t1.exon5;Parent=MS.gene83623.t1 |
| chr2.1 | CDS | 48955552 | 48955753 | 48955552 | ID=cds.MS.gene83623.t1;Parent=MS.gene83623.t1 |
| chr2.1 | exon | 48954120 | 48954240 | 48954120 | ID=MS.gene83623.t1.exon6;Parent=MS.gene83623.t1 |
| chr2.1 | CDS | 48954120 | 48954240 | 48954120 | ID=cds.MS.gene83623.t1;Parent=MS.gene83623.t1 |
| chr2.1 | exon | 48952404 | 48954016 | 48952404 | ID=MS.gene83623.t1.exon7;Parent=MS.gene83623.t1 |
| chr2.1 | CDS | 48952404 | 48954016 | 48952404 | ID=cds.MS.gene83623.t1;Parent=MS.gene83623.t1 |
| Gene Sequence |
| Protein sequence |
