Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88044.t1 | XP_003605420.2 | 94.5 | 343 | 17 | 1 | 1 | 341 | 1 | 343 | 5.50E-180 | 640.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88044.t1 | Q9SJZ2 | 73.1 | 316 | 85 | 0 | 12 | 327 | 7 | 322 | 1.0e-134 | 481.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88044.t1 | G7JKV1 | 94.5 | 343 | 17 | 1 | 1 | 341 | 1 | 343 | 4.0e-180 | 640.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene35931 | MS.gene88044 | PPI |
MS.gene20276 | MS.gene88044 | PPI |
MS.gene24236 | MS.gene88044 | PPI |
MS.gene67066 | MS.gene88044 | PPI |
MS.gene88044 | MS.gene015231 | PPI |
MS.gene27263 | MS.gene88044 | PPI |
MS.gene35853 | MS.gene88044 | PPI |
MS.gene57204 | MS.gene88044 | PPI |
MS.gene35795 | MS.gene88044 | PPI |
MS.gene072888 | MS.gene88044 | PPI |
MS.gene27001 | MS.gene88044 | PPI |
MS.gene029047 | MS.gene88044 | PPI |
MS.gene014924 | MS.gene88044 | PPI |
MS.gene90718 | MS.gene88044 | PPI |
MS.gene32715 | MS.gene88044 | PPI |
MS.gene80170 | MS.gene88044 | PPI |
MS.gene014836 | MS.gene88044 | PPI |
MS.gene09575 | MS.gene88044 | PPI |
MS.gene32635 | MS.gene88044 | PPI |
MS.gene44482 | MS.gene88044 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88044.t1 | MTR_4g031140 | 94.461 | 343 | 17 | 1 | 1 | 341 | 1 | 343 | 0.0 | 644 |
MS.gene88044.t1 | MTR_4g030890 | 85.948 | 306 | 43 | 0 | 21 | 326 | 93 | 398 | 0.0 | 565 |
MS.gene88044.t1 | MTR_8g076820 | 48.505 | 301 | 151 | 3 | 28 | 324 | 30 | 330 | 7.60e-98 | 293 |
MS.gene88044.t1 | MTR_3g094650 | 46.688 | 317 | 156 | 5 | 10 | 321 | 11 | 319 | 2.31e-97 | 291 |
MS.gene88044.t1 | MTR_3g072190 | 45.652 | 322 | 160 | 5 | 11 | 324 | 4 | 318 | 1.49e-95 | 286 |
MS.gene88044.t1 | MTR_3g466200 | 45.963 | 322 | 161 | 5 | 9 | 324 | 6 | 320 | 2.33e-94 | 283 |
MS.gene88044.t1 | MTR_5g021060 | 46.844 | 301 | 156 | 3 | 28 | 324 | 30 | 330 | 2.37e-93 | 281 |
MS.gene88044.t1 | MTR_2g029800 | 46.078 | 306 | 160 | 3 | 26 | 326 | 27 | 332 | 8.25e-93 | 281 |
MS.gene88044.t1 | MTR_5g074970 | 45.509 | 334 | 162 | 6 | 1 | 324 | 3 | 326 | 3.36e-92 | 278 |
MS.gene88044.t1 | MTR_2g040000 | 46.602 | 309 | 155 | 4 | 25 | 325 | 26 | 332 | 4.89e-91 | 275 |
MS.gene88044.t1 | MTR_1g101830 | 45.110 | 317 | 171 | 3 | 9 | 324 | 8 | 322 | 9.05e-91 | 275 |
MS.gene88044.t1 | MTR_5g074860 | 46.605 | 324 | 153 | 7 | 12 | 323 | 9 | 324 | 1.18e-90 | 274 |
MS.gene88044.t1 | MTR_2g029740 | 44.805 | 308 | 165 | 3 | 24 | 326 | 25 | 332 | 1.99e-90 | 275 |
MS.gene88044.t1 | MTR_5g083860 | 45.625 | 320 | 162 | 4 | 10 | 324 | 13 | 325 | 2.00e-90 | 274 |
MS.gene88044.t1 | MTR_7g093370 | 42.857 | 322 | 176 | 5 | 10 | 325 | 53 | 372 | 3.23e-89 | 272 |
MS.gene88044.t1 | MTR_2g029750 | 44.481 | 308 | 166 | 3 | 24 | 326 | 25 | 332 | 3.61e-89 | 271 |
MS.gene88044.t1 | MTR_2g028980 | 44.194 | 310 | 168 | 3 | 22 | 326 | 23 | 332 | 5.93e-89 | 271 |
MS.gene88044.t1 | MTR_4g122640 | 44.590 | 305 | 163 | 4 | 24 | 324 | 34 | 336 | 1.32e-88 | 270 |
MS.gene88044.t1 | MTR_3g466180 | 45.141 | 319 | 165 | 3 | 9 | 324 | 12 | 323 | 4.04e-88 | 268 |
MS.gene88044.t1 | MTR_5g074760 | 44.444 | 324 | 163 | 6 | 11 | 324 | 5 | 321 | 7.41e-88 | 267 |
MS.gene88044.t1 | MTR_5g074740 | 45.625 | 320 | 160 | 5 | 12 | 324 | 9 | 321 | 1.29e-87 | 266 |
MS.gene88044.t1 | MTR_1g022970 | 46.885 | 305 | 157 | 3 | 25 | 324 | 43 | 347 | 1.97e-87 | 267 |
MS.gene88044.t1 | MTR_3g094670 | 44.479 | 326 | 168 | 5 | 4 | 324 | 5 | 322 | 1.29e-86 | 264 |
MS.gene88044.t1 | MTR_4g029170 | 44.548 | 321 | 166 | 5 | 9 | 324 | 8 | 321 | 1.90e-86 | 263 |
MS.gene88044.t1 | MTR_2g029815 | 42.547 | 322 | 176 | 4 | 14 | 326 | 11 | 332 | 2.78e-86 | 264 |
MS.gene88044.t1 | MTR_4g125940 | 41.925 | 322 | 178 | 4 | 11 | 325 | 11 | 330 | 6.70e-86 | 262 |
MS.gene88044.t1 | MTR_3g094630 | 44.860 | 321 | 163 | 5 | 11 | 324 | 9 | 322 | 7.71e-86 | 262 |
MS.gene88044.t1 | MTR_7g026990 | 42.767 | 318 | 173 | 2 | 10 | 325 | 13 | 323 | 2.92e-85 | 260 |
MS.gene88044.t1 | MTR_2g084010 | 43.653 | 323 | 171 | 4 | 6 | 324 | 3 | 318 | 4.69e-85 | 259 |
MS.gene88044.t1 | MTR_2g084080 | 43.614 | 321 | 167 | 4 | 11 | 324 | 4 | 317 | 6.29e-85 | 259 |
MS.gene88044.t1 | MTR_4g083710 | 42.105 | 323 | 171 | 6 | 12 | 324 | 8 | 324 | 8.72e-85 | 259 |
MS.gene88044.t1 | MTR_5g074710 | 44.410 | 322 | 165 | 5 | 10 | 324 | 7 | 321 | 1.05e-84 | 259 |
MS.gene88044.t1 | MTR_1g054205 | 40.252 | 318 | 184 | 4 | 14 | 325 | 10 | 327 | 3.83e-84 | 258 |
MS.gene88044.t1 | MTR_2g029820 | 42.532 | 308 | 172 | 3 | 24 | 326 | 25 | 332 | 5.22e-84 | 258 |
MS.gene88044.t1 | MTR_5g049280 | 42.378 | 328 | 176 | 6 | 10 | 325 | 12 | 338 | 8.23e-84 | 257 |
MS.gene88044.t1 | MTR_2g084110 | 44.201 | 319 | 166 | 5 | 10 | 324 | 7 | 317 | 2.71e-83 | 255 |
MS.gene88044.t1 | MTR_5g017850 | 42.683 | 328 | 178 | 6 | 2 | 324 | 4 | 326 | 3.08e-83 | 255 |
MS.gene88044.t1 | MTR_2g029830 | 42.623 | 305 | 170 | 3 | 26 | 325 | 26 | 330 | 4.45e-83 | 256 |
MS.gene88044.t1 | MTR_2g084020 | 42.415 | 323 | 175 | 4 | 6 | 324 | 3 | 318 | 8.72e-83 | 254 |
MS.gene88044.t1 | MTR_4g029180 | 45.973 | 298 | 149 | 5 | 32 | 324 | 31 | 321 | 9.67e-83 | 254 |
MS.gene88044.t1 | MTR_2g084090 | 42.547 | 322 | 170 | 5 | 11 | 324 | 4 | 318 | 1.73e-82 | 253 |
MS.gene88044.t1 | MTR_5g014100 | 45.066 | 304 | 154 | 5 | 32 | 324 | 30 | 331 | 5.10e-82 | 252 |
MS.gene88044.t1 | MTR_2g029560 | 42.623 | 305 | 170 | 3 | 26 | 325 | 22 | 326 | 5.26e-82 | 253 |
MS.gene88044.t1 | MTR_7g072510 | 42.089 | 316 | 173 | 3 | 12 | 324 | 4 | 312 | 1.17e-81 | 251 |
MS.gene88044.t1 | MTR_4g029200 | 43.377 | 302 | 161 | 3 | 26 | 324 | 44 | 338 | 1.17e-81 | 252 |
MS.gene88044.t1 | MTR_2g029860 | 39.752 | 322 | 188 | 4 | 11 | 326 | 11 | 332 | 1.42e-81 | 252 |
MS.gene88044.t1 | MTR_2g084000 | 41.401 | 314 | 173 | 4 | 15 | 324 | 13 | 319 | 6.43e-81 | 249 |
MS.gene88044.t1 | MTR_2g029850 | 40.810 | 321 | 185 | 3 | 24 | 339 | 25 | 345 | 6.49e-81 | 250 |
MS.gene88044.t1 | MTR_4g029190 | 42.540 | 315 | 168 | 5 | 16 | 324 | 33 | 340 | 1.58e-80 | 249 |
MS.gene88044.t1 | MTR_5g017860 | 41.768 | 328 | 181 | 6 | 2 | 324 | 4 | 326 | 1.94e-80 | 248 |
MS.gene88044.t1 | MTR_2g029730 | 44.118 | 306 | 164 | 4 | 26 | 325 | 23 | 327 | 3.45e-80 | 248 |
MS.gene88044.t1 | MTR_2g029910 | 39.815 | 324 | 189 | 4 | 24 | 341 | 26 | 349 | 8.49e-80 | 247 |
MS.gene88044.t1 | MTR_4g074995 | 41.379 | 319 | 158 | 7 | 16 | 324 | 9 | 308 | 2.65e-79 | 244 |
MS.gene88044.t1 | MTR_3g467600 | 41.975 | 324 | 171 | 7 | 11 | 324 | 8 | 324 | 3.28e-79 | 245 |
MS.gene88044.t1 | MTR_1g025980 | 40.635 | 315 | 182 | 5 | 10 | 323 | 7 | 317 | 1.02e-78 | 243 |
MS.gene88044.t1 | MTR_4g125940 | 44.203 | 276 | 145 | 4 | 57 | 325 | 2 | 275 | 4.05e-78 | 240 |
MS.gene88044.t1 | MTR_7g072480 | 42.722 | 316 | 171 | 3 | 12 | 324 | 8 | 316 | 1.95e-77 | 240 |
MS.gene88044.t1 | MTR_3g072190 | 46.693 | 257 | 127 | 3 | 71 | 324 | 2 | 251 | 3.19e-77 | 237 |
MS.gene88044.t1 | MTR_8g075100 | 41.639 | 305 | 171 | 5 | 22 | 324 | 20 | 319 | 3.44e-77 | 239 |
MS.gene88044.t1 | MTR_4g074990 | 40.625 | 320 | 161 | 6 | 11 | 324 | 9 | 305 | 5.26e-77 | 239 |
MS.gene88044.t1 | MTR_1g115900 | 40.483 | 331 | 182 | 6 | 1 | 325 | 1 | 322 | 5.40e-77 | 239 |
MS.gene88044.t1 | MTR_4g133800 | 42.953 | 298 | 158 | 7 | 31 | 324 | 44 | 333 | 7.15e-77 | 239 |
MS.gene88044.t1 | MTR_4g046713 | 38.889 | 324 | 190 | 5 | 8 | 324 | 4 | 326 | 3.74e-76 | 237 |
MS.gene88044.t1 | MTR_5g022870 | 40.694 | 317 | 182 | 5 | 10 | 324 | 4 | 316 | 4.74e-76 | 236 |
MS.gene88044.t1 | MTR_0155s0040 | 40.125 | 319 | 173 | 6 | 14 | 324 | 7 | 315 | 9.59e-76 | 236 |
MS.gene88044.t1 | MTR_1g077000 | 39.506 | 324 | 177 | 6 | 10 | 324 | 14 | 327 | 2.47e-74 | 233 |
MS.gene88044.t1 | MTR_7g029030 | 39.498 | 319 | 184 | 5 | 10 | 324 | 7 | 320 | 1.31e-73 | 230 |
MS.gene88044.t1 | MTR_1g009750 | 37.654 | 324 | 189 | 6 | 13 | 324 | 6 | 328 | 1.43e-72 | 228 |
MS.gene88044.t1 | MTR_4g087965 | 39.296 | 341 | 169 | 9 | 10 | 320 | 10 | 342 | 3.01e-72 | 228 |
MS.gene88044.t1 | MTR_3g092990 | 37.730 | 326 | 199 | 3 | 4 | 325 | 2 | 327 | 5.34e-72 | 226 |
MS.gene88044.t1 | MTR_7g086820 | 38.511 | 309 | 170 | 6 | 26 | 326 | 18 | 314 | 1.03e-71 | 225 |
MS.gene88044.t1 | MTR_2g088770 | 39.077 | 325 | 190 | 7 | 5 | 324 | 4 | 325 | 2.09e-71 | 225 |
MS.gene88044.t1 | MTR_2g437770 | 41.275 | 298 | 162 | 6 | 32 | 325 | 54 | 342 | 3.70e-71 | 225 |
MS.gene88044.t1 | MTR_7g107520 | 38.889 | 306 | 180 | 5 | 22 | 324 | 19 | 320 | 9.21e-71 | 223 |
MS.gene88044.t1 | MTR_5g016010 | 37.582 | 306 | 185 | 4 | 24 | 323 | 23 | 328 | 3.70e-70 | 222 |
MS.gene88044.t1 | MTR_4g074980 | 37.931 | 319 | 163 | 6 | 12 | 324 | 5 | 294 | 4.53e-69 | 218 |
MS.gene88044.t1 | MTR_4g074980 | 43.137 | 255 | 131 | 4 | 12 | 258 | 5 | 253 | 1.67e-68 | 215 |
MS.gene88044.t1 | MTR_2g008710 | 38.509 | 322 | 186 | 6 | 10 | 324 | 9 | 325 | 6.24e-68 | 216 |
MS.gene88044.t1 | MTR_7g086870 | 37.540 | 309 | 168 | 6 | 26 | 325 | 20 | 312 | 9.17e-68 | 215 |
MS.gene88044.t1 | MTR_8g062780 | 36.875 | 320 | 195 | 4 | 11 | 324 | 6 | 324 | 3.45e-67 | 214 |
MS.gene88044.t1 | MTR_5g074860 | 39.009 | 323 | 140 | 6 | 12 | 323 | 9 | 285 | 7.06e-67 | 212 |
MS.gene88044.t1 | MTR_4g114210 | 37.618 | 319 | 186 | 6 | 14 | 324 | 7 | 320 | 1.19e-66 | 213 |
MS.gene88044.t1 | MTR_1g038680 | 42.193 | 301 | 167 | 6 | 31 | 324 | 32 | 332 | 7.03e-66 | 211 |
MS.gene88044.t1 | MTR_0286s0010 | 38.080 | 323 | 187 | 8 | 10 | 324 | 17 | 334 | 4.78e-65 | 209 |
MS.gene88044.t1 | MTR_6g008075 | 38.080 | 323 | 187 | 8 | 10 | 324 | 17 | 334 | 4.78e-65 | 209 |
MS.gene88044.t1 | MTR_1g086320 | 38.629 | 321 | 190 | 5 | 11 | 324 | 13 | 333 | 1.01e-64 | 208 |
MS.gene88044.t1 | MTR_6g043280 | 38.796 | 299 | 170 | 7 | 32 | 326 | 45 | 334 | 2.42e-64 | 207 |
MS.gene88044.t1 | MTR_1g090760 | 36.677 | 319 | 196 | 5 | 12 | 324 | 12 | 330 | 7.18e-64 | 206 |
MS.gene88044.t1 | MTR_6g027440 | 35.962 | 317 | 196 | 4 | 10 | 324 | 3 | 314 | 7.85e-64 | 205 |
MS.gene88044.t1 | MTR_2g029830 | 41.245 | 257 | 146 | 3 | 74 | 325 | 6 | 262 | 3.93e-63 | 202 |
MS.gene88044.t1 | MTR_1g086490 | 38.110 | 328 | 189 | 5 | 11 | 324 | 13 | 340 | 6.20e-63 | 204 |
MS.gene88044.t1 | MTR_6g043240 | 38.235 | 306 | 172 | 8 | 28 | 328 | 42 | 335 | 9.38e-63 | 204 |
MS.gene88044.t1 | MTR_5g033470 | 38.188 | 309 | 175 | 6 | 28 | 324 | 73 | 377 | 2.94e-62 | 203 |
MS.gene88044.t1 | MTR_4g031040 | 60.920 | 174 | 25 | 2 | 87 | 260 | 1 | 131 | 3.03e-62 | 195 |
MS.gene88044.t1 | MTR_4g132490 | 34.641 | 306 | 194 | 3 | 23 | 324 | 24 | 327 | 3.57e-62 | 201 |
MS.gene88044.t1 | MTR_3g092990 | 35.890 | 326 | 194 | 4 | 4 | 325 | 2 | 316 | 8.71e-62 | 200 |
MS.gene88044.t1 | MTR_6g043460 | 35.455 | 330 | 189 | 9 | 12 | 326 | 10 | 330 | 3.05e-61 | 199 |
MS.gene88044.t1 | MTR_1g009750 | 34.783 | 322 | 184 | 7 | 13 | 324 | 6 | 311 | 1.84e-60 | 196 |
MS.gene88044.t1 | MTR_4g095450 | 35.161 | 310 | 190 | 5 | 20 | 323 | 19 | 323 | 3.55e-60 | 196 |
MS.gene88044.t1 | MTR_2g067440 | 36.391 | 338 | 179 | 7 | 22 | 325 | 54 | 389 | 5.53e-60 | 197 |
MS.gene88044.t1 | MTR_1g066380 | 35.505 | 307 | 184 | 5 | 26 | 325 | 25 | 324 | 2.20e-59 | 194 |
MS.gene88044.t1 | MTR_4g127670 | 36.789 | 299 | 180 | 5 | 28 | 320 | 24 | 319 | 4.09e-59 | 193 |
MS.gene88044.t1 | MTR_1g066640 | 34.202 | 307 | 188 | 5 | 26 | 325 | 25 | 324 | 1.21e-57 | 189 |
MS.gene88044.t1 | MTR_2g077990 | 36.127 | 346 | 184 | 7 | 16 | 325 | 64 | 408 | 2.32e-57 | 191 |
MS.gene88044.t1 | MTR_2g099175 | 34.426 | 305 | 187 | 5 | 28 | 324 | 36 | 335 | 2.88e-57 | 189 |
MS.gene88044.t1 | MTR_1g066710 | 34.202 | 307 | 188 | 6 | 26 | 325 | 25 | 324 | 3.73e-57 | 188 |
MS.gene88044.t1 | MTR_2g078280 | 36.196 | 326 | 174 | 5 | 16 | 308 | 64 | 388 | 1.45e-56 | 189 |
MS.gene88044.t1 | MTR_1g066680 | 34.853 | 307 | 185 | 6 | 26 | 325 | 25 | 323 | 3.86e-56 | 186 |
MS.gene88044.t1 | MTR_2g078610 | 35.549 | 346 | 186 | 7 | 16 | 325 | 64 | 408 | 1.14e-55 | 187 |
MS.gene88044.t1 | MTR_4g132110 | 32.523 | 329 | 200 | 7 | 11 | 324 | 7 | 328 | 1.78e-54 | 182 |
MS.gene88044.t1 | MTR_2g008160 | 36.246 | 309 | 184 | 8 | 24 | 324 | 20 | 323 | 3.90e-53 | 178 |
MS.gene88044.t1 | MTR_4g132110 | 32.440 | 336 | 200 | 9 | 11 | 326 | 7 | 335 | 1.25e-52 | 177 |
MS.gene88044.t1 | MTR_2g008730 | 34.783 | 322 | 174 | 7 | 10 | 324 | 9 | 301 | 1.03e-50 | 171 |
MS.gene88044.t1 | MTR_3g105790 | 33.231 | 325 | 208 | 6 | 5 | 324 | 2 | 322 | 3.34e-49 | 167 |
MS.gene88044.t1 | MTR_2g067450 | 34.921 | 315 | 187 | 7 | 22 | 325 | 5 | 312 | 2.34e-48 | 165 |
MS.gene88044.t1 | MTR_1g066380 | 34.866 | 261 | 156 | 5 | 72 | 325 | 3 | 256 | 7.14e-46 | 157 |
MS.gene88044.t1 | MTR_0147s0010 | 31.975 | 319 | 180 | 7 | 28 | 323 | 77 | 381 | 4.99e-45 | 158 |
MS.gene88044.t1 | MTR_3g072210 | 43.005 | 193 | 94 | 5 | 139 | 324 | 55 | 238 | 5.27e-42 | 146 |
MS.gene88044.t1 | MTR_5g074700 | 40.611 | 229 | 112 | 6 | 101 | 324 | 5 | 214 | 6.55e-42 | 145 |
MS.gene88044.t1 | MTR_2g008160 | 32.039 | 309 | 162 | 8 | 24 | 324 | 20 | 288 | 5.04e-40 | 142 |
MS.gene88044.t1 | MTR_2g008160 | 41.379 | 174 | 98 | 3 | 24 | 197 | 20 | 189 | 2.15e-39 | 138 |
MS.gene88044.t1 | MTR_3g072260 | 50.388 | 129 | 60 | 1 | 11 | 135 | 5 | 133 | 3.64e-38 | 133 |
MS.gene88044.t1 | MTR_7g072490 | 36.325 | 234 | 89 | 4 | 74 | 307 | 2 | 175 | 1.98e-35 | 128 |
MS.gene88044.t1 | MTR_2g029880 | 38.421 | 190 | 104 | 4 | 140 | 325 | 9 | 189 | 5.76e-34 | 124 |
MS.gene88044.t1 | MTR_3g105790 | 34.615 | 234 | 142 | 6 | 99 | 324 | 16 | 246 | 3.07e-31 | 118 |
MS.gene88044.t1 | MTR_7g086790 | 34.555 | 191 | 104 | 5 | 75 | 265 | 17 | 186 | 2.10e-25 | 101 |
MS.gene88044.t1 | MTR_2g077980 | 32.042 | 284 | 137 | 12 | 90 | 325 | 11 | 286 | 1.67e-24 | 101 |
MS.gene88044.t1 | MTR_5g058120 | 35.625 | 160 | 89 | 4 | 164 | 320 | 7 | 155 | 1.43e-21 | 92.8 |
MS.gene88044.t1 | MTR_2g078560 | 30.734 | 218 | 117 | 4 | 137 | 320 | 99 | 316 | 1.78e-21 | 93.6 |
MS.gene88044.t1 | MTR_6g048160 | 55.556 | 72 | 28 | 2 | 66 | 137 | 21 | 88 | 1.47e-18 | 79.7 |
MS.gene88044.t1 | MTR_3g462850 | 36.364 | 143 | 81 | 5 | 192 | 325 | 9 | 150 | 2.06e-18 | 81.3 |
MS.gene88044.t1 | MTR_7g086810 | 34.167 | 120 | 53 | 2 | 26 | 145 | 4 | 97 | 4.69e-17 | 79.7 |
MS.gene88044.t1 | MTR_4g114220 | 46.429 | 84 | 35 | 2 | 54 | 137 | 29 | 102 | 5.68e-17 | 77.0 |
MS.gene88044.t1 | MTR_1g089005 | 32.331 | 133 | 83 | 2 | 14 | 140 | 1 | 132 | 4.01e-16 | 75.1 |
MS.gene88044.t1 | MTR_1g098320 | 43.902 | 82 | 44 | 1 | 249 | 328 | 47 | 128 | 7.47e-14 | 68.6 |
MS.gene88044.t1 | MTR_7g086785 | 30.935 | 139 | 90 | 2 | 74 | 212 | 4 | 136 | 2.47e-13 | 67.0 |
MS.gene88044.t1 | MTR_4g012865 | 39.726 | 73 | 35 | 1 | 28 | 91 | 77 | 149 | 1.10e-12 | 65.5 |
MS.gene88044.t1 | MTR_2g029930 | 33.333 | 108 | 43 | 3 | 14 | 106 | 1 | 94 | 3.18e-12 | 62.8 |
MS.gene88044.t1 | MTR_3g107060 | 29.878 | 164 | 91 | 6 | 43 | 198 | 91 | 238 | 1.17e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88044.t1 | AT2G22420 | 73.101 | 316 | 85 | 0 | 12 | 327 | 7 | 322 | 1.33e-177 | 495 |
MS.gene88044.t1 | AT2G18150 | 44.817 | 328 | 168 | 4 | 10 | 324 | 9 | 336 | 1.76e-97 | 292 |
MS.gene88044.t1 | AT4G36430 | 47.351 | 302 | 155 | 3 | 28 | 325 | 30 | 331 | 1.71e-96 | 289 |
MS.gene88044.t1 | AT5G19890 | 46.341 | 328 | 166 | 5 | 3 | 324 | 4 | 327 | 1.97e-96 | 289 |
MS.gene88044.t1 | AT5G06730 | 43.598 | 328 | 173 | 4 | 16 | 331 | 14 | 341 | 9.21e-96 | 288 |
MS.gene88044.t1 | AT5G06720 | 44.892 | 323 | 166 | 4 | 15 | 325 | 12 | 334 | 8.61e-95 | 285 |
MS.gene88044.t1 | AT5G66390 | 45.847 | 301 | 159 | 3 | 28 | 324 | 33 | 333 | 1.43e-93 | 282 |
MS.gene88044.t1 | AT2G18140 | 44.954 | 327 | 168 | 4 | 10 | 324 | 9 | 335 | 5.94e-93 | 281 |
MS.gene88044.t1 | AT2G38390 | 44.762 | 315 | 168 | 4 | 24 | 332 | 27 | 341 | 1.40e-91 | 278 |
MS.gene88044.t1 | AT4G08780 | 43.987 | 316 | 170 | 4 | 21 | 329 | 17 | 332 | 2.04e-90 | 275 |
MS.gene88044.t1 | AT4G16270 | 47.475 | 297 | 152 | 4 | 31 | 324 | 53 | 348 | 2.42e-90 | 274 |
MS.gene88044.t1 | AT2G38380 | 44.444 | 315 | 169 | 4 | 24 | 332 | 27 | 341 | 1.06e-89 | 273 |
MS.gene88044.t1 | AT4G08770 | 43.671 | 316 | 171 | 4 | 21 | 329 | 17 | 332 | 2.85e-89 | 271 |
MS.gene88044.t1 | AT3G50990 | 44.224 | 303 | 165 | 3 | 26 | 324 | 39 | 341 | 1.18e-88 | 270 |
MS.gene88044.t1 | AT1G44970 | 45.724 | 304 | 160 | 3 | 26 | 324 | 43 | 346 | 5.39e-88 | 268 |
MS.gene88044.t1 | AT5G05340 | 44.156 | 308 | 158 | 4 | 23 | 324 | 25 | 324 | 2.32e-87 | 266 |
MS.gene88044.t1 | AT5G19880 | 45.171 | 321 | 168 | 5 | 12 | 324 | 9 | 329 | 6.40e-87 | 265 |
MS.gene88044.t1 | AT3G32980 | 43.354 | 316 | 172 | 4 | 23 | 331 | 26 | 341 | 5.34e-86 | 263 |
MS.gene88044.t1 | AT5G51890 | 42.991 | 321 | 179 | 3 | 6 | 324 | 4 | 322 | 7.40e-86 | 262 |
MS.gene88044.t1 | AT5G58400 | 44.375 | 320 | 165 | 5 | 11 | 324 | 13 | 325 | 2.51e-85 | 261 |
MS.gene88044.t1 | AT1G68850 | 41.071 | 336 | 174 | 7 | 11 | 325 | 4 | 336 | 6.15e-85 | 260 |
MS.gene88044.t1 | AT3G49110 | 43.131 | 313 | 171 | 4 | 26 | 331 | 31 | 343 | 1.09e-84 | 260 |
MS.gene88044.t1 | AT3G49120 | 41.456 | 316 | 178 | 4 | 23 | 331 | 27 | 342 | 9.05e-83 | 255 |
MS.gene88044.t1 | AT5G42180 | 41.325 | 317 | 182 | 4 | 8 | 323 | 3 | 316 | 2.78e-81 | 250 |
MS.gene88044.t1 | AT1G14540 | 40.125 | 319 | 181 | 4 | 10 | 324 | 3 | 315 | 7.79e-81 | 249 |
MS.gene88044.t1 | AT2G35380 | 46.078 | 306 | 156 | 5 | 28 | 324 | 30 | 335 | 1.31e-80 | 249 |
MS.gene88044.t1 | AT5G58390 | 42.633 | 319 | 170 | 5 | 12 | 324 | 5 | 316 | 6.23e-80 | 246 |
MS.gene88044.t1 | AT1G49570 | 43.377 | 302 | 165 | 4 | 25 | 320 | 45 | 346 | 1.10e-79 | 247 |
MS.gene88044.t1 | AT5G17820 | 39.875 | 321 | 180 | 6 | 7 | 324 | 3 | 313 | 3.07e-79 | 244 |
MS.gene88044.t1 | AT5G17820 | 39.692 | 325 | 183 | 6 | 3 | 324 | 52 | 366 | 2.01e-78 | 244 |
MS.gene88044.t1 | AT1G14550 | 40.625 | 320 | 176 | 6 | 13 | 324 | 8 | 321 | 6.02e-78 | 242 |
MS.gene88044.t1 | AT3G49960 | 39.130 | 322 | 189 | 5 | 10 | 324 | 8 | 329 | 1.18e-74 | 233 |
MS.gene88044.t1 | AT3G03670 | 38.006 | 321 | 187 | 4 | 11 | 324 | 6 | 321 | 5.53e-74 | 231 |
MS.gene88044.t1 | AT4G33420 | 42.373 | 295 | 158 | 5 | 32 | 324 | 41 | 325 | 2.09e-73 | 230 |
MS.gene88044.t1 | AT5G64120 | 39.024 | 328 | 180 | 8 | 11 | 324 | 7 | 328 | 2.34e-73 | 230 |
MS.gene88044.t1 | AT4G33420 | 42.373 | 295 | 158 | 5 | 32 | 324 | 88 | 372 | 8.04e-73 | 230 |
MS.gene88044.t1 | AT5G39580 | 39.432 | 317 | 182 | 7 | 12 | 324 | 9 | 319 | 5.13e-72 | 226 |
MS.gene88044.t1 | AT1G05260 | 39.683 | 315 | 183 | 6 | 16 | 325 | 14 | 326 | 6.89e-72 | 226 |
MS.gene88044.t1 | AT3G01190 | 42.857 | 322 | 165 | 10 | 10 | 324 | 12 | 321 | 9.55e-72 | 226 |
MS.gene88044.t1 | AT4G37520 | 38.361 | 305 | 182 | 4 | 26 | 324 | 25 | 329 | 2.01e-71 | 225 |
MS.gene88044.t1 | AT1G71695 | 40.129 | 309 | 172 | 6 | 28 | 330 | 44 | 345 | 3.34e-71 | 226 |
MS.gene88044.t1 | AT2G41480 | 39.628 | 323 | 177 | 7 | 15 | 324 | 11 | 328 | 6.97e-71 | 224 |
MS.gene88044.t1 | AT4G37530 | 38.710 | 310 | 184 | 4 | 21 | 324 | 20 | 329 | 1.59e-70 | 223 |
MS.gene88044.t1 | AT4G11290 | 38.037 | 326 | 194 | 7 | 6 | 324 | 2 | 326 | 2.61e-70 | 222 |
MS.gene88044.t1 | AT5G67400 | 38.436 | 307 | 183 | 4 | 24 | 324 | 23 | 329 | 8.04e-70 | 221 |
MS.gene88044.t1 | AT5G15180 | 41.447 | 304 | 165 | 7 | 28 | 324 | 32 | 329 | 1.10e-69 | 221 |
MS.gene88044.t1 | AT2G34060 | 38.348 | 339 | 175 | 11 | 12 | 322 | 12 | 344 | 2.62e-68 | 218 |
MS.gene88044.t1 | AT4G37520 | 37.705 | 305 | 181 | 5 | 26 | 324 | 25 | 326 | 2.94e-68 | 217 |
MS.gene88044.t1 | AT3G21770 | 38.730 | 315 | 184 | 6 | 17 | 325 | 18 | 329 | 1.33e-67 | 215 |
MS.gene88044.t1 | AT4G30170 | 37.097 | 310 | 177 | 6 | 25 | 324 | 24 | 325 | 1.20e-66 | 213 |
MS.gene88044.t1 | AT1G05240 | 39.799 | 299 | 171 | 6 | 32 | 324 | 30 | 325 | 3.40e-66 | 212 |
MS.gene88044.t1 | AT1G05250 | 39.799 | 299 | 171 | 6 | 32 | 324 | 30 | 325 | 3.40e-66 | 212 |
MS.gene88044.t1 | AT1G77100 | 38.110 | 328 | 176 | 9 | 10 | 324 | 6 | 319 | 8.77e-66 | 210 |
MS.gene88044.t1 | AT5G14130 | 34.043 | 329 | 191 | 5 | 10 | 324 | 14 | 330 | 1.32e-64 | 207 |
MS.gene88044.t1 | AT2G18980 | 35.890 | 326 | 182 | 6 | 12 | 324 | 12 | 323 | 1.33e-64 | 207 |
MS.gene88044.t1 | AT3G28200 | 37.624 | 303 | 176 | 5 | 28 | 324 | 21 | 316 | 1.44e-64 | 207 |
MS.gene88044.t1 | AT5G47000 | 38.462 | 325 | 186 | 6 | 9 | 324 | 11 | 330 | 1.60e-64 | 207 |
MS.gene88044.t1 | AT4G17690 | 39.145 | 304 | 173 | 6 | 27 | 324 | 25 | 322 | 2.33e-64 | 207 |
MS.gene88044.t1 | AT5G14130 | 34.043 | 329 | 191 | 5 | 10 | 324 | 55 | 371 | 3.25e-64 | 208 |
MS.gene88044.t1 | AT1G30870 | 40.532 | 301 | 165 | 7 | 32 | 326 | 55 | 347 | 4.58e-64 | 207 |
MS.gene88044.t1 | AT1G24110 | 34.069 | 317 | 201 | 5 | 14 | 324 | 8 | 322 | 2.36e-62 | 202 |
MS.gene88044.t1 | AT5G40150 | 37.584 | 298 | 176 | 4 | 32 | 324 | 36 | 328 | 2.73e-62 | 202 |
MS.gene88044.t1 | AT4G26010 | 38.614 | 303 | 169 | 7 | 26 | 324 | 20 | 309 | 3.05e-62 | 201 |
MS.gene88044.t1 | AT2G39040 | 37.785 | 307 | 179 | 7 | 28 | 324 | 46 | 350 | 3.48e-62 | 202 |
MS.gene88044.t1 | AT4G37530 | 40.769 | 260 | 150 | 3 | 21 | 276 | 20 | 279 | 3.63e-62 | 200 |
MS.gene88044.t1 | AT4G26010 | 38.614 | 303 | 169 | 7 | 26 | 324 | 48 | 337 | 4.32e-62 | 201 |
MS.gene88044.t1 | AT4G25980 | 36.774 | 310 | 184 | 6 | 23 | 324 | 21 | 326 | 5.58e-62 | 201 |
MS.gene88044.t1 | AT5G64110 | 38.411 | 302 | 174 | 6 | 29 | 324 | 35 | 330 | 1.85e-60 | 197 |
MS.gene88044.t1 | AT5G64100 | 35.030 | 334 | 188 | 9 | 10 | 324 | 8 | 331 | 2.57e-60 | 197 |
MS.gene88044.t1 | AT4G21960 | 33.535 | 331 | 200 | 7 | 7 | 324 | 4 | 327 | 1.03e-59 | 195 |
MS.gene88044.t1 | AT3G17070 | 33.631 | 336 | 207 | 5 | 2 | 324 | 7 | 339 | 1.30e-57 | 190 |
MS.gene88044.t1 | AT4G33870 | 32.934 | 334 | 179 | 4 | 28 | 320 | 68 | 397 | 2.82e-57 | 191 |
MS.gene88044.t1 | AT1G34510 | 36.111 | 324 | 174 | 10 | 11 | 324 | 9 | 309 | 4.81e-57 | 187 |
MS.gene88044.t1 | AT2G24800 | 36.066 | 305 | 185 | 5 | 26 | 324 | 29 | 329 | 7.84e-57 | 187 |
MS.gene88044.t1 | AT5G22410 | 37.338 | 308 | 178 | 7 | 28 | 327 | 28 | 328 | 9.71e-57 | 187 |
MS.gene88044.t1 | AT2G35380 | 44.534 | 247 | 128 | 5 | 87 | 324 | 1 | 247 | 3.62e-56 | 183 |
MS.gene88044.t1 | AT2G37130 | 33.758 | 314 | 193 | 7 | 19 | 324 | 21 | 327 | 3.90e-56 | 186 |
MS.gene88044.t1 | AT2G37130 | 34.551 | 301 | 182 | 7 | 32 | 324 | 3 | 296 | 1.48e-55 | 183 |
MS.gene88044.t1 | AT2G43480 | 35.644 | 303 | 179 | 6 | 32 | 324 | 39 | 335 | 6.42e-54 | 180 |
MS.gene88044.t1 | AT5G24070 | 33.882 | 304 | 185 | 6 | 32 | 325 | 39 | 336 | 6.01e-52 | 175 |
MS.gene88044.t1 | AT4G31760 | 32.919 | 322 | 201 | 7 | 11 | 324 | 12 | 326 | 6.42e-52 | 175 |
MS.gene88044.t1 | AT5G39580 | 40.722 | 194 | 110 | 3 | 12 | 205 | 9 | 197 | 4.94e-44 | 151 |
MS.gene88044.t1 | AT3G17070 | 33.955 | 268 | 165 | 5 | 65 | 324 | 13 | 276 | 1.12e-42 | 149 |
MS.gene88044.t1 | AT4G25980 | 42.197 | 173 | 96 | 3 | 23 | 195 | 66 | 234 | 2.00e-39 | 141 |
MS.gene88044.t1 | AT2G24800 | 39.175 | 194 | 108 | 4 | 26 | 213 | 29 | 218 | 3.35e-34 | 126 |
MS.gene88044.t1 | AT1G77490 | 26.599 | 297 | 168 | 10 | 62 | 338 | 106 | 372 | 5.01e-18 | 85.1 |
MS.gene88044.t1 | AT1G77490 | 26.599 | 297 | 168 | 10 | 62 | 338 | 106 | 372 | 6.69e-18 | 84.7 |
MS.gene88044.t1 | AT4G08390 | 26.022 | 269 | 148 | 9 | 62 | 311 | 126 | 362 | 5.86e-15 | 75.5 |
MS.gene88044.t1 | AT4G08390 | 26.022 | 269 | 148 | 9 | 62 | 311 | 127 | 363 | 6.41e-15 | 75.5 |
MS.gene88044.t1 | AT4G08390 | 26.022 | 269 | 148 | 9 | 62 | 311 | 127 | 363 | 6.41e-15 | 75.5 |
MS.gene88044.t1 | AT4G08390 | 26.022 | 269 | 148 | 9 | 62 | 311 | 127 | 363 | 6.41e-15 | 75.5 |
MS.gene88044.t1 | AT3G42570 | 36.842 | 95 | 59 | 1 | 100 | 193 | 53 | 147 | 1.13e-14 | 70.9 |
Find 60 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGCTGATATCATAATTA+TGG | 0.210247 | 4.3:+69454710 | MS.gene88044:CDS |
TGAAGTTGTTGATGAGATTA+AGG | 0.231611 | 4.3:+69454653 | MS.gene88044:CDS |
TGTTGAAGGAATGTTGAAAT+TGG | 0.241814 | 4.3:+69455861 | MS.gene88044:CDS |
CAACCAAGTCCTTGAAATAT+TGG | 0.258540 | 4.3:-69455732 | None:intergenic |
CCTAACCTCACTTCCCAATT+AGG | 0.274883 | 4.3:-69455388 | None:intergenic |
TGCAGACAGGAGGACCTAAT+TGG | 0.285329 | 4.3:+69455374 | MS.gene88044:intron |
AACTATGCTTGGAGAGAAAT+TGG | 0.290246 | 4.3:+69454599 | MS.gene88044:CDS |
ATAACAGAGGCAACACTTCT+TGG | 0.295424 | 4.3:-69454212 | None:intergenic |
CCTAACTTCACCAGGCTTAT+CGG | 0.331197 | 4.3:-69455896 | None:intergenic |
CTAAATACTGGATCAATTGC+AGG | 0.334629 | 4.3:-69455625 | None:intergenic |
CTCTTGTCTTCAGACAATTT+CGG | 0.335453 | 4.3:-69455946 | None:intergenic |
GGAAGTGAGGTTAGGAAGAT+TGG | 0.339310 | 4.3:+69455396 | MS.gene88044:CDS |
TCAAGTTCTGCTCTAAATAC+TGG | 0.343444 | 4.3:-69455637 | None:intergenic |
CTCACAAACCCCTTTGTTTG+AGG | 0.385011 | 4.3:-69455799 | None:intergenic |
TTCACTTTCCCTCAAACAAA+GGG | 0.399642 | 4.3:+69455790 | MS.gene88044:CDS |
CCGATAAGCCTGGTGAAGTT+AGG | 0.401902 | 4.3:+69455896 | MS.gene88044:CDS |
TTCTAGAGATGTTGTAGCAC+TGG | 0.411817 | 4.3:+69454734 | MS.gene88044:CDS |
CTGACGATTGTTTCAGCTTG+TGG | 0.419242 | 4.3:-69454158 | None:intergenic |
GTTGAAGGAATGTTGAAATT+GGG | 0.420650 | 4.3:+69455862 | MS.gene88044:CDS |
AAGGACTTGGTTGGTGGAAG+AGG | 0.432566 | 4.3:+69455742 | MS.gene88044:CDS |
TTTCGATAACCAATATTTCA+AGG | 0.438590 | 4.3:+69455723 | MS.gene88044:CDS |
TCACAAACCCCTTTGTTTGA+GGG | 0.448085 | 4.3:-69455798 | None:intergenic |
CAATTCTTCCTAACTTCACC+AGG | 0.452043 | 4.3:-69455904 | None:intergenic |
GCAGACAGGAGGACCTAATT+GGG | 0.460309 | 4.3:+69455375 | MS.gene88044:intron |
TAACCAATATTTCAAGGACT+TGG | 0.464692 | 4.3:+69455729 | MS.gene88044:CDS |
AGGGTCAGGCTTTCCGCTAC+CGG | 0.465665 | 4.3:-69455605 | None:intergenic |
AAAGACCTTGTAGCACTCTC+AGG | 0.475027 | 4.3:+69455523 | MS.gene88044:CDS |
TTTCACTTTCCCTCAAACAA+AGG | 0.488533 | 4.3:+69455789 | MS.gene88044:CDS |
GAGGAAGAATAGTGATCAAT+CGG | 0.491248 | 4.3:+69455966 | MS.gene88044:CDS |
ACTGGATCAATTGCAGGGTC+AGG | 0.499134 | 4.3:-69455619 | None:intergenic |
CCTAATTGGGAAGTGAGGTT+AGG | 0.501427 | 4.3:+69455388 | MS.gene88044:CDS |
CAATATTTCAAGGACTTGGT+TGG | 0.502030 | 4.3:+69455733 | MS.gene88044:CDS |
AGAGCGGTAGCATTAGATCT+TGG | 0.511490 | 4.3:-69455466 | None:intergenic |
AATTTCTCTCCAAGCATAGT+TGG | 0.513582 | 4.3:-69454597 | None:intergenic |
ACATCAGCTGATCTTCGACC+TGG | 0.522951 | 4.3:+69454116 | MS.gene88044:CDS |
ATGGTTCAAAACAAAACTAA+AGG | 0.529098 | 4.3:+69454047 | MS.gene88044:CDS |
GTAGCATTAGATCTTGGACT+TGG | 0.533618 | 4.3:-69455460 | None:intergenic |
GATGATACACCAACTATGCT+TGG | 0.538107 | 4.3:+69454588 | MS.gene88044:CDS |
TATTTCAAGGACTTGGTTGG+TGG | 0.538804 | 4.3:+69455736 | MS.gene88044:CDS |
TAATTTGTGAAGGGTTGTGA+TGG | 0.543375 | 4.3:+69454552 | MS.gene88044:intron |
AAATCACAGGAGTTGCATCA+AGG | 0.548807 | 4.3:-69455702 | None:intergenic |
GATGTCGATCAAAATAAGAC+AGG | 0.549535 | 4.3:+69455676 | MS.gene88044:CDS |
TGCCTTTCATTGCAGACAGG+AGG | 0.557468 | 4.3:+69455364 | MS.gene88044:intron |
TTTAGGCTATACAATCAATC+CGG | 0.565740 | 4.3:+69455586 | MS.gene88044:CDS |
GCATTAGAGAAAGCTTGTCC+TGG | 0.567211 | 4.3:+69454678 | MS.gene88044:CDS |
CGAAATTGTCTGAAGACAAG+AGG | 0.581931 | 4.3:+69455947 | MS.gene88044:CDS |
CTATACAATCAATCCGGTAG+CGG | 0.583155 | 4.3:+69455592 | MS.gene88044:CDS |
GACTTGCAGTCCGATAAGCC+TGG | 0.584575 | 4.3:+69455886 | MS.gene88044:CDS |
TCAGCACAAGAAACAACTCC+AGG | 0.586737 | 4.3:-69454696 | None:intergenic |
CTCTCAGGATCACACTCTAT+CGG | 0.590516 | 4.3:+69455538 | MS.gene88044:CDS |
CATCAGCTGATCTTCGACCT+GGG | 0.592449 | 4.3:+69454117 | MS.gene88044:CDS |
TATTGGTTATCGAAAATCAC+AGG | 0.593232 | 4.3:-69455715 | None:intergenic |
AGTTGTTGATGAGATTAAGG+AGG | 0.604842 | 4.3:+69454656 | MS.gene88044:CDS |
TTGGAAGAGATTAATGAGAG+CGG | 0.614681 | 4.3:-69455482 | None:intergenic |
GTGATCCTGAGAGTGCTACA+AGG | 0.617824 | 4.3:-69455528 | None:intergenic |
TAAATACTGGATCAATTGCA+GGG | 0.638216 | 4.3:-69455624 | None:intergenic |
TCACTTTCCCTCAAACAAAG+GGG | 0.650198 | 4.3:+69455791 | MS.gene88044:CDS |
GAGGACCTAATTGGGAAGTG+AGG | 0.676683 | 4.3:+69455383 | MS.gene88044:CDS |
AAATTGAAATCTCATAACAG+AGG | 0.697630 | 4.3:-69454225 | None:intergenic |
CTACAAGGTCTTTAACACTG+AGG | 0.746017 | 4.3:-69455513 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTATTTAAAAAAATAAT+CGG | - | chr4.3:69454463-69454482 | None:intergenic | 0.0% |
!!! | TTCTTTTATGATTTATGAAA+AGG | + | chr4.3:69454788-69454807 | MS.gene88044:intron | 15.0% |
!!! | TTTTATTTTAAAACTGAAAG+TGG | + | chr4.3:69454966-69454985 | MS.gene88044:intron | 15.0% |
!! | AATGAAAGGCAAAAAAAAAT+AGG | - | chr4.3:69455355-69455374 | None:intergenic | 20.0% |
!! | ATGAAAGGCAAAAAAAAATA+GGG | - | chr4.3:69455354-69455373 | None:intergenic | 20.0% |
!! | CTAATTTATATGGACAATAT+TGG | - | chr4.3:69455135-69455154 | None:intergenic | 20.0% |
!! | GAGTATAAATTAGATCAATA+TGG | - | chr4.3:69455065-69455084 | None:intergenic | 20.0% |
!! | TTGAATATGAAGTTTCAATA+AGG | - | chr4.3:69455328-69455347 | None:intergenic | 20.0% |
!!! | TGGCAAAATAAATCTATTTT+AGG | + | chr4.3:69454986-69455005 | MS.gene88044:intron | 20.0% |
!!! | TTGAAAAGATAGAATTTTGA+TGG | - | chr4.3:69454295-69454314 | None:intergenic | 20.0% |
! | AAATTGAAATCTCATAACAG+AGG | - | chr4.3:69454228-69454247 | None:intergenic | 25.0% |
! | ATATGGACAATATTGGAAAA+GGG | - | chr4.3:69455128-69455147 | None:intergenic | 25.0% |
! | ATGGTTCAAAACAAAACTAA+AGG | + | chr4.3:69454047-69454066 | MS.gene88044:CDS | 25.0% |
! | TATATGGACAATATTGGAAA+AGG | - | chr4.3:69455129-69455148 | None:intergenic | 25.0% |
! | TTTCGATAACCAATATTTCA+AGG | + | chr4.3:69455723-69455742 | MS.gene88044:CDS | 25.0% |
!! | TTGTGCTGATATCATAATTA+TGG | + | chr4.3:69454710-69454729 | MS.gene88044:CDS | 25.0% |
!!! | ATGAGTTGTTTAATTTGTGA+AGG | + | chr4.3:69454542-69454561 | MS.gene88044:intron | 25.0% |
!!! | GTGTAATTTTGCTGTTTTTT+TGG | + | chr4.3:69455089-69455108 | MS.gene88044:intron | 25.0% |
!!! | GTTGTTTTTCAATCATGTTT+AGG | + | chr4.3:69455569-69455588 | MS.gene88044:CDS | 25.0% |
!!! | TATGGTAAACATTTTAGCAT+CGG | - | chr4.3:69455047-69455066 | None:intergenic | 25.0% |
!!! | TGAGTTGTTTAATTTGTGAA+GGG | + | chr4.3:69454543-69454562 | MS.gene88044:intron | 25.0% |
!!! | TTTTTCAAAGCATTTGTTGA+AGG | + | chr4.3:69455847-69455866 | MS.gene88044:CDS | 25.0% |
ATGAAGTTTCAATAAGGATC+TGG | - | chr4.3:69455322-69455341 | None:intergenic | 30.0% | |
GTTGAAGGAATGTTGAAATT+GGG | + | chr4.3:69455862-69455881 | MS.gene88044:CDS | 30.0% | |
TAAATACTGGATCAATTGCA+GGG | - | chr4.3:69455627-69455646 | None:intergenic | 30.0% | |
TAACCAATATTTCAAGGACT+TGG | + | chr4.3:69455729-69455748 | MS.gene88044:CDS | 30.0% | |
TCCTTTAATTCAAGGTCAAA+CGG | - | chr4.3:69455214-69455233 | None:intergenic | 30.0% | |
TCGTCTGTGTCTAATTTATA+TGG | - | chr4.3:69455145-69455164 | None:intergenic | 30.0% | |
TGTTGAAGGAATGTTGAAAT+TGG | + | chr4.3:69455861-69455880 | MS.gene88044:CDS | 30.0% | |
TTTAGGCTATACAATCAATC+CGG | + | chr4.3:69455586-69455605 | MS.gene88044:CDS | 30.0% | |
! | TAACACTGAGGTTGTATTTT+TGG | - | chr4.3:69455504-69455523 | None:intergenic | 30.0% |
! | TATTGGTTATCGAAAATCAC+AGG | - | chr4.3:69455718-69455737 | None:intergenic | 30.0% |
! | TGAAGTTGTTGATGAGATTA+AGG | + | chr4.3:69454653-69454672 | MS.gene88044:CDS | 30.0% |
AACTATGCTTGGAGAGAAAT+TGG | + | chr4.3:69454599-69454618 | MS.gene88044:CDS | 35.0% | |
AATTTCTCTCCAAGCATAGT+TGG | - | chr4.3:69454600-69454619 | None:intergenic | 35.0% | |
ACAGACGAAAATAGATTTGG+TGG | + | chr4.3:69455157-69455176 | MS.gene88044:intron | 35.0% | |
ACCGTTTGACCTTGAATTAA+AGG | + | chr4.3:69455210-69455229 | MS.gene88044:intron | 35.0% | |
AGATGTCGTCCTTTAATTCA+AGG | - | chr4.3:69455222-69455241 | None:intergenic | 35.0% | |
CAACCAAGTCCTTGAAATAT+TGG | - | chr4.3:69455735-69455754 | None:intergenic | 35.0% | |
CGGAGAAACACACAAAATAT+TGG | - | chr4.3:69455027-69455046 | None:intergenic | 35.0% | |
CTAAATACTGGATCAATTGC+AGG | - | chr4.3:69455628-69455647 | None:intergenic | 35.0% | |
CTCTTGTCTTCAGACAATTT+CGG | - | chr4.3:69455949-69455968 | None:intergenic | 35.0% | |
GACACAGACGAAAATAGATT+TGG | + | chr4.3:69455154-69455173 | MS.gene88044:intron | 35.0% | |
GAGGAAGAATAGTGATCAAT+CGG | + | chr4.3:69455966-69455985 | MS.gene88044:CDS | 35.0% | |
GATGTCGATCAAAATAAGAC+AGG | + | chr4.3:69455676-69455695 | MS.gene88044:CDS | 35.0% | |
TTCACTTTCCCTCAAACAAA+GGG | + | chr4.3:69455790-69455809 | MS.gene88044:CDS | 35.0% | |
TTGGAAGAGATTAATGAGAG+CGG | - | chr4.3:69455485-69455504 | None:intergenic | 35.0% | |
TTTCACTTTCCCTCAAACAA+AGG | + | chr4.3:69455789-69455808 | MS.gene88044:CDS | 35.0% | |
! | AGTTGTTGATGAGATTAAGG+AGG | + | chr4.3:69454656-69454675 | MS.gene88044:CDS | 35.0% |
! | CAATATTTCAAGGACTTGGT+TGG | + | chr4.3:69455733-69455752 | MS.gene88044:CDS | 35.0% |
! | TAATTTGTGAAGGGTTGTGA+TGG | + | chr4.3:69454552-69454571 | MS.gene88044:intron | 35.0% |
! | TCAAGTTCTGCTCTAAATAC+TGG | - | chr4.3:69455640-69455659 | None:intergenic | 35.0% |
!!! | CATGTTTTTGAGTAATACCC+AGG | - | chr4.3:69454137-69454156 | None:intergenic | 35.0% |
!!! | TTATTTTGATCGACATCTCG+TGG | - | chr4.3:69455673-69455692 | None:intergenic | 35.0% |
AAATCACAGGAGTTGCATCA+AGG | - | chr4.3:69455705-69455724 | None:intergenic | 40.0% | |
ATAACAGAGGCAACACTTCT+TGG | - | chr4.3:69454215-69454234 | None:intergenic | 40.0% | |
CAATTCTTCCTAACTTCACC+AGG | - | chr4.3:69455907-69455926 | None:intergenic | 40.0% | |
CGAAATTGTCTGAAGACAAG+AGG | + | chr4.3:69455947-69455966 | MS.gene88044:CDS | 40.0% | |
CTACAAGGTCTTTAACACTG+AGG | - | chr4.3:69455516-69455535 | None:intergenic | 40.0% | |
CTATACAATCAATCCGGTAG+CGG | + | chr4.3:69455592-69455611 | MS.gene88044:CDS | 40.0% | |
GATGATACACCAACTATGCT+TGG | + | chr4.3:69454588-69454607 | MS.gene88044:CDS | 40.0% | |
GTAGCATTAGATCTTGGACT+TGG | - | chr4.3:69455463-69455482 | None:intergenic | 40.0% | |
TCACTTTCCCTCAAACAAAG+GGG | + | chr4.3:69455791-69455810 | MS.gene88044:CDS | 40.0% | |
! | TATTTCAAGGACTTGGTTGG+TGG | + | chr4.3:69455736-69455755 | MS.gene88044:CDS | 40.0% |
! | TCACAAACCCCTTTGTTTGA+GGG | - | chr4.3:69455801-69455820 | None:intergenic | 40.0% |
! | TTCTAGAGATGTTGTAGCAC+TGG | + | chr4.3:69454734-69454753 | MS.gene88044:CDS | 40.0% |
! | TTTTGCCTTTCATTGCAGAC+AGG | + | chr4.3:69455361-69455380 | MS.gene88044:intron | 40.0% |
AAAGACCTTGTAGCACTCTC+AGG | + | chr4.3:69455523-69455542 | MS.gene88044:CDS | 45.0% | |
AGAGCGGTAGCATTAGATCT+TGG | - | chr4.3:69455469-69455488 | None:intergenic | 45.0% | |
CCTAACCTCACTTCCCAATT+AGG | - | chr4.3:69455391-69455410 | None:intergenic | 45.0% | |
CCTAACTTCACCAGGCTTAT+CGG | - | chr4.3:69455899-69455918 | None:intergenic | 45.0% | |
CCTAATTGGGAAGTGAGGTT+AGG | + | chr4.3:69455388-69455407 | MS.gene88044:CDS | 45.0% | |
CTCTCAGGATCACACTCTAT+CGG | + | chr4.3:69455538-69455557 | MS.gene88044:CDS | 45.0% | |
CTGACGATTGTTTCAGCTTG+TGG | - | chr4.3:69454161-69454180 | None:intergenic | 45.0% | |
GCATTAGAGAAAGCTTGTCC+TGG | + | chr4.3:69454678-69454697 | MS.gene88044:CDS | 45.0% | |
GGAAGTGAGGTTAGGAAGAT+TGG | + | chr4.3:69455396-69455415 | MS.gene88044:CDS | 45.0% | |
TCAGCACAAGAAACAACTCC+AGG | - | chr4.3:69454699-69454718 | None:intergenic | 45.0% | |
! | CTCACAAACCCCTTTGTTTG+AGG | - | chr4.3:69455802-69455821 | None:intergenic | 45.0% |
!!! | TTTATAAAATTATTTTTCTT+TGG | + | chr4.3:69454515-69454534 | MS.gene88044:intron | 5.0% |
!!! | TTTTATTTAAAAAAATAATC+GGG | - | chr4.3:69454462-69454481 | None:intergenic | 5.0% |
!!! | TTTTTAAATAAAATAATGAT+AGG | + | chr4.3:69454469-69454488 | MS.gene88044:intron | 5.0% |
ACATCAGCTGATCTTCGACC+TGG | + | chr4.3:69454116-69454135 | MS.gene88044:CDS | 50.0% | |
ACTGGATCAATTGCAGGGTC+AGG | - | chr4.3:69455622-69455641 | None:intergenic | 50.0% | |
CATCAGCTGATCTTCGACCT+GGG | + | chr4.3:69454117-69454136 | MS.gene88044:CDS | 50.0% | |
CCGATAAGCCTGGTGAAGTT+AGG | + | chr4.3:69455896-69455915 | MS.gene88044:CDS | 50.0% | |
GAGGACCTAATTGGGAAGTG+AGG | + | chr4.3:69455383-69455402 | MS.gene88044:CDS | 50.0% | |
GCAGACAGGAGGACCTAATT+GGG | + | chr4.3:69455375-69455394 | MS.gene88044:intron | 50.0% | |
GTCCTCCTGTCTGCAATGAA+AGG | - | chr4.3:69455369-69455388 | None:intergenic | 50.0% | |
TGCAGACAGGAGGACCTAAT+TGG | + | chr4.3:69455374-69455393 | MS.gene88044:intron | 50.0% | |
TGCCTTTCATTGCAGACAGG+AGG | + | chr4.3:69455364-69455383 | MS.gene88044:intron | 50.0% | |
!! | AAGGACTTGGTTGGTGGAAG+AGG | + | chr4.3:69455742-69455761 | MS.gene88044:CDS | 50.0% |
!! | GTGATCCTGAGAGTGCTACA+AGG | - | chr4.3:69455531-69455550 | None:intergenic | 50.0% |
GACTTGCAGTCCGATAAGCC+TGG | + | chr4.3:69455886-69455905 | MS.gene88044:CDS | 55.0% | |
AGGGTCAGGCTTTCCGCTAC+CGG | - | chr4.3:69455608-69455627 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 69454047 | 69455993 | 69454047 | ID=MS.gene88044 |
chr4.3 | mRNA | 69454047 | 69455993 | 69454047 | ID=MS.gene88044.t1;Parent=MS.gene88044 |
chr4.3 | exon | 69454047 | 69454265 | 69454047 | ID=MS.gene88044.t1.exon1;Parent=MS.gene88044.t1 |
chr4.3 | CDS | 69454047 | 69454265 | 69454047 | ID=cds.MS.gene88044.t1;Parent=MS.gene88044.t1 |
chr4.3 | exon | 69454564 | 69454755 | 69454564 | ID=MS.gene88044.t1.exon2;Parent=MS.gene88044.t1 |
chr4.3 | CDS | 69454564 | 69454755 | 69454564 | ID=cds.MS.gene88044.t1;Parent=MS.gene88044.t1 |
chr4.3 | exon | 69455379 | 69455993 | 69455379 | ID=MS.gene88044.t1.exon3;Parent=MS.gene88044.t1 |
chr4.3 | CDS | 69455379 | 69455993 | 69455379 | ID=cds.MS.gene88044.t1;Parent=MS.gene88044.t1 |
Gene Sequence |
Protein sequence |