Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88063.t1 | XP_003622131.1 | 99.3 | 431 | 3 | 0 | 1 | 431 | 12 | 442 | 1.80E-244 | 854.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88063.t1 | Q9SGA0 | 68.9 | 427 | 119 | 6 | 1 | 419 | 13 | 433 | 1.6e-156 | 553.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88063.t1 | G7L275 | 99.3 | 431 | 3 | 0 | 1 | 431 | 12 | 442 | 1.3e-244 | 854.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene88063 | 0.823118 | 1.65E-53 | -1.69E-46 |
| MS.gene049669 | MS.gene88063 | 0.806238 | 9.07E-50 | -1.69E-46 |
| MS.gene050029 | MS.gene88063 | 0.805557 | 1.26E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene88063 | 0.802558 | 5.30E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene88063 | 0.825678 | 4.11E-54 | -1.69E-46 |
| MS.gene050228 | MS.gene88063 | 0.830612 | 2.66E-55 | -1.69E-46 |
| MS.gene050750 | MS.gene88063 | 0.832421 | 9.55E-56 | -1.69E-46 |
| MS.gene050820 | MS.gene88063 | 0.80435 | 2.25E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene88063 | 0.814607 | 1.41E-51 | -1.69E-46 |
| MS.gene051368 | MS.gene88063 | 0.807755 | 4.33E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene88063 | 0.814527 | 1.47E-51 | -1.69E-46 |
| MS.gene052190 | MS.gene88063 | 0.825048 | 5.80E-54 | -1.69E-46 |
| MS.gene052333 | MS.gene88063 | 0.869009 | 4.27E-66 | -1.69E-46 |
| MS.gene052389 | MS.gene88063 | 0.835486 | 1.63E-56 | -1.69E-46 |
| MS.gene052586 | MS.gene88063 | 0.822251 | 2.62E-53 | -1.69E-46 |
| MS.gene052867 | MS.gene88063 | 0.802842 | 4.63E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene88063 | 0.836647 | 8.28E-57 | -1.69E-46 |
| MS.gene05415 | MS.gene88063 | 0.806788 | 6.94E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene88063 | -0.852983 | 3.23E-61 | -1.69E-46 |
| MS.gene054405 | MS.gene88063 | 0.809517 | 1.82E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene88063 | 0.827766 | 1.30E-54 | -1.69E-46 |
| MS.gene054559 | MS.gene88063 | 0.823173 | 1.60E-53 | -1.69E-46 |
| MS.gene055367 | MS.gene88063 | 0.826308 | 2.91E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene88063 | 0.84705 | 1.48E-59 | -1.69E-46 |
| MS.gene05595 | MS.gene88063 | 0.847644 | 1.02E-59 | -1.69E-46 |
| MS.gene056506 | MS.gene88063 | 0.830475 | 2.88E-55 | -1.69E-46 |
| MS.gene057026 | MS.gene88063 | 0.847025 | 1.50E-59 | -1.69E-46 |
| MS.gene057156 | MS.gene88063 | -0.824415 | 8.17E-54 | -1.69E-46 |
| MS.gene059247 | MS.gene88063 | 0.800159 | 1.64E-48 | -1.69E-46 |
| MS.gene060572 | MS.gene88063 | 0.813991 | 1.93E-51 | -1.69E-46 |
| MS.gene060879 | MS.gene88063 | 0.850914 | 1.25E-60 | -1.69E-46 |
| MS.gene061040 | MS.gene88063 | -0.828702 | 7.76E-55 | -1.69E-46 |
| MS.gene061114 | MS.gene88063 | -0.832123 | 1.13E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90601 | MS.gene88063 | PPI |
| MS.gene054781 | MS.gene88063 | PPI |
| MS.gene88063 | MS.gene029645 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88063.t1 | MTR_7g028050 | 99.304 | 431 | 3 | 0 | 1 | 431 | 12 | 442 | 0.0 | 885 |
| MS.gene88063.t1 | MTR_7g028050 | 99.115 | 339 | 3 | 0 | 93 | 431 | 1 | 339 | 0.0 | 696 |
| MS.gene88063.t1 | MTR_5g047260 | 59.397 | 431 | 168 | 4 | 1 | 431 | 28 | 451 | 0.0 | 523 |
| MS.gene88063.t1 | MTR_7g022470 | 56.064 | 437 | 180 | 5 | 1 | 431 | 21 | 451 | 2.46e-166 | 475 |
| MS.gene88063.t1 | MTR_5g011580 | 49.886 | 439 | 198 | 5 | 1 | 431 | 17 | 441 | 2.16e-145 | 421 |
| MS.gene88063.t1 | MTR_4g101950 | 49.431 | 439 | 200 | 5 | 1 | 431 | 17 | 441 | 1.70e-143 | 417 |
| MS.gene88063.t1 | MTR_5g047260 | 58.702 | 339 | 134 | 4 | 1 | 339 | 28 | 360 | 1.92e-140 | 406 |
| MS.gene88063.t1 | MTR_3g088885 | 49.306 | 432 | 206 | 7 | 1 | 424 | 20 | 446 | 1.52e-138 | 404 |
| MS.gene88063.t1 | MTR_1g029520 | 48.485 | 429 | 210 | 6 | 6 | 424 | 254 | 681 | 1.08e-132 | 397 |
| MS.gene88063.t1 | MTR_5g047260 | 59.233 | 287 | 112 | 3 | 1 | 287 | 28 | 309 | 1.93e-118 | 348 |
| MS.gene88063.t1 | MTR_5g015170 | 43.237 | 414 | 205 | 6 | 1 | 389 | 20 | 428 | 1.88e-114 | 344 |
| MS.gene88063.t1 | MTR_4g097380 | 40.594 | 404 | 226 | 3 | 1 | 390 | 39 | 442 | 1.74e-103 | 316 |
| MS.gene88063.t1 | MTR_1g012740 | 37.903 | 124 | 70 | 2 | 231 | 353 | 30 | 147 | 4.15e-21 | 90.1 |
| MS.gene88063.t1 | MTR_1g012740 | 41.176 | 102 | 53 | 3 | 5 | 101 | 29 | 128 | 1.05e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88063.t1 | AT3G01990 | 68.150 | 427 | 122 | 6 | 1 | 419 | 27 | 447 | 0.0 | 573 |
| MS.gene88063.t1 | AT3G01990 | 68.150 | 427 | 122 | 6 | 1 | 419 | 27 | 447 | 0.0 | 573 |
| MS.gene88063.t1 | AT3G01990 | 68.150 | 427 | 122 | 6 | 1 | 419 | 13 | 433 | 0.0 | 572 |
| MS.gene88063.t1 | AT3G01990 | 68.150 | 427 | 122 | 6 | 1 | 419 | 13 | 433 | 0.0 | 572 |
| MS.gene88063.t1 | AT3G01990 | 72.610 | 387 | 99 | 4 | 1 | 386 | 27 | 407 | 0.0 | 564 |
| MS.gene88063.t1 | AT3G01990 | 72.610 | 387 | 99 | 4 | 1 | 386 | 13 | 393 | 0.0 | 563 |
| MS.gene88063.t1 | AT1G69040 | 61.697 | 436 | 160 | 4 | 1 | 431 | 22 | 455 | 0.0 | 551 |
| MS.gene88063.t1 | AT1G69040 | 61.697 | 436 | 160 | 4 | 1 | 431 | 18 | 451 | 0.0 | 551 |
| MS.gene88063.t1 | AT2G03730 | 58.314 | 439 | 169 | 6 | 1 | 429 | 22 | 456 | 3.64e-176 | 500 |
| MS.gene88063.t1 | AT2G03730 | 58.314 | 439 | 169 | 6 | 1 | 429 | 22 | 456 | 3.64e-176 | 500 |
| MS.gene88063.t1 | AT3G01990 | 70.846 | 319 | 86 | 4 | 1 | 318 | 27 | 339 | 8.91e-160 | 454 |
| MS.gene88063.t1 | AT3G01990 | 69.753 | 324 | 91 | 4 | 1 | 323 | 27 | 344 | 1.01e-159 | 454 |
| MS.gene88063.t1 | AT3G01990 | 69.753 | 324 | 91 | 4 | 1 | 323 | 13 | 330 | 2.39e-159 | 453 |
| MS.gene88063.t1 | AT1G76990 | 51.054 | 427 | 195 | 6 | 1 | 416 | 20 | 443 | 2.35e-144 | 419 |
| MS.gene88063.t1 | AT1G76990 | 51.054 | 427 | 195 | 6 | 1 | 416 | 20 | 443 | 2.35e-144 | 419 |
| MS.gene88063.t1 | AT1G76990 | 51.054 | 427 | 195 | 6 | 1 | 416 | 20 | 443 | 2.35e-144 | 419 |
| MS.gene88063.t1 | AT1G76990 | 51.054 | 427 | 195 | 6 | 1 | 416 | 20 | 443 | 2.35e-144 | 419 |
| MS.gene88063.t1 | AT1G76990 | 51.054 | 427 | 195 | 6 | 1 | 416 | 20 | 443 | 2.35e-144 | 419 |
| MS.gene88063.t1 | AT1G12420 | 49.772 | 438 | 200 | 5 | 1 | 431 | 17 | 441 | 8.49e-140 | 407 |
| MS.gene88063.t1 | AT4G22780 | 48.884 | 448 | 195 | 7 | 1 | 430 | 17 | 448 | 3.79e-136 | 398 |
| MS.gene88063.t1 | AT4G22780 | 48.884 | 448 | 195 | 7 | 1 | 430 | 17 | 448 | 3.79e-136 | 398 |
| MS.gene88063.t1 | AT3G01990 | 68.662 | 284 | 82 | 4 | 1 | 283 | 27 | 304 | 1.85e-134 | 389 |
| MS.gene88063.t1 | AT3G01990 | 68.662 | 284 | 82 | 4 | 1 | 283 | 13 | 290 | 4.69e-134 | 387 |
| MS.gene88063.t1 | AT5G25320 | 43.448 | 435 | 194 | 5 | 3 | 394 | 24 | 449 | 7.25e-128 | 379 |
| MS.gene88063.t1 | AT5G25320 | 43.301 | 418 | 185 | 5 | 19 | 393 | 1 | 409 | 7.94e-123 | 365 |
| MS.gene88063.t1 | AT5G65890 | 42.056 | 428 | 214 | 6 | 1 | 401 | 21 | 441 | 9.75e-112 | 337 |
| MS.gene88063.t1 | AT5G65890 | 42.056 | 428 | 214 | 6 | 1 | 401 | 21 | 441 | 9.75e-112 | 337 |
| MS.gene88063.t1 | AT1G12420 | 47.906 | 382 | 179 | 5 | 57 | 431 | 1 | 369 | 2.74e-110 | 329 |
| MS.gene88063.t1 | AT5G25320 | 43.094 | 362 | 154 | 6 | 3 | 321 | 24 | 376 | 2.32e-99 | 301 |
| MS.gene88063.t1 | AT5G65890 | 40.657 | 396 | 201 | 6 | 33 | 401 | 1 | 389 | 3.90e-97 | 298 |
| MS.gene88063.t1 | AT5G65890 | 40.657 | 396 | 201 | 6 | 33 | 401 | 1 | 389 | 3.90e-97 | 298 |
| MS.gene88063.t1 | AT5G65890 | 40.317 | 315 | 171 | 4 | 102 | 401 | 15 | 327 | 1.27e-75 | 240 |
| MS.gene88063.t1 | AT5G04740 | 28.000 | 175 | 100 | 5 | 4 | 152 | 95 | 269 | 4.43e-12 | 67.0 |
Find 102 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGATGGAGTTTGGTTTA+TGG | 0.140421 | 7.1:+69526833 | MS.gene88063:CDS |
| TCTCTCAGCCTCTGAGCTTA+TGG | 0.248727 | 7.1:-69528991 | None:intergenic |
| TCAATAATCTTTGGATCAAC+TGG | 0.254312 | 7.1:-69529699 | None:intergenic |
| TATGAACCTTGTGATTAAAA+AGG | 0.256217 | 7.1:+69526800 | MS.gene88063:CDS |
| CGGATTGAATCAATAATCTT+TGG | 0.268125 | 7.1:-69529708 | None:intergenic |
| TTTGCTCTGTAACGTGCTTC+GGG | 0.287780 | 7.1:+69528117 | MS.gene88063:CDS |
| CGTCCCGTCTCTCCACAATA+AGG | 0.298680 | 7.1:+69528092 | MS.gene88063:CDS |
| AGAAAGGACAGGGGCTTATC+AGG | 0.309556 | 7.1:+69528432 | MS.gene88063:CDS |
| ACAACAATTGGATTTCTCTT+TGG | 0.313884 | 7.1:+69529801 | MS.gene88063:CDS |
| CACACTGTTATTGAACTTAC+TGG | 0.318462 | 7.1:+69527917 | MS.gene88063:CDS |
| TGAAAACGCCACTGTTATTC+AGG | 0.320918 | 7.1:+69526558 | MS.gene88063:CDS |
| ATATTTCCTCTGATGGAGTT+TGG | 0.326275 | 7.1:+69526826 | MS.gene88063:CDS |
| ATTTGCTCTGTAACGTGCTT+CGG | 0.330102 | 7.1:+69528116 | MS.gene88063:CDS |
| CTCTCAGCCTCTGAGCTTAT+GGG | 0.354199 | 7.1:-69528990 | None:intergenic |
| ATCAGATTATGTTTGCTGAT+AGG | 0.355750 | 7.1:+69528212 | MS.gene88063:CDS |
| ACATCCTGGAGTTACGTATA+GGG | 0.365344 | 7.1:+69528177 | MS.gene88063:CDS |
| GTTGTTCCTTGAGGTGGTTT+TGG | 0.365505 | 7.1:-69529783 | None:intergenic |
| GGACTTAGAGAAAGAGATAA+AGG | 0.373479 | 7.1:+69528259 | MS.gene88063:CDS |
| TCAGATTATGTTTGCTGATA+GGG | 0.377860 | 7.1:+69528213 | MS.gene88063:CDS |
| AGTTACATCAGTGACGTAAA+AGG | 0.381411 | 7.1:-69529670 | None:intergenic |
| CCACCTCAAGGAACAACAAT+TGG | 0.386888 | 7.1:+69529789 | MS.gene88063:CDS |
| CACATCCTGGAGTTACGTAT+AGG | 0.390969 | 7.1:+69528176 | MS.gene88063:CDS |
| ACGTGGTAACCGCCGAGATT+TGG | 0.405979 | 7.1:+69527999 | MS.gene88063:CDS |
| CGTCGATGAGAGAGTCTGTT+GGG | 0.427819 | 7.1:+69527876 | MS.gene88063:CDS |
| CTCATCGACGTTTCAAAGCT+CGG | 0.431463 | 7.1:-69527863 | None:intergenic |
| GAGACGGGACGGATCCTCTA+TGG | 0.438044 | 7.1:-69528080 | None:intergenic |
| AGTATTATGCGTCCAAATCT+CGG | 0.439323 | 7.1:-69528011 | None:intergenic |
| AAGGCTTATATTTCCTCTGA+TGG | 0.443541 | 7.1:+69526819 | MS.gene88063:CDS |
| GTCCCGTCTCTCCACAATAA+GGG | 0.458534 | 7.1:+69528093 | MS.gene88063:CDS |
| GAGACAGTTACATGTGGAAA+TGG | 0.463913 | 7.1:-69528283 | None:intergenic |
| ATCCTCTATGGCACAACCAC+TGG | 0.470852 | 7.1:-69528068 | None:intergenic |
| CCAATTGTTGTTCCTTGAGG+TGG | 0.481529 | 7.1:-69529789 | None:intergenic |
| ATCCCTTATTGTGGAGAGAC+GGG | 0.482816 | 7.1:-69528095 | None:intergenic |
| TTTAATGTGACGGATCGAAA+TGG | 0.483271 | 7.1:+69527040 | MS.gene88063:CDS |
| GCAGAAATATCAACAGAAAA+CGG | 0.485454 | 7.1:+69529633 | MS.gene88063:CDS |
| GGTTCATATCTGAAATAACT+TGG | 0.492510 | 7.1:-69526785 | None:intergenic |
| TTGCTGATAGGGACTATGAA+AGG | 0.495088 | 7.1:+69528224 | MS.gene88063:CDS |
| CCGTGTCGCCGATCTGTCTA+CGG | 0.499307 | 7.1:-69529728 | None:intergenic |
| AAACAAACACGGGATCCTCT+TGG | 0.504961 | 7.1:+69526755 | MS.gene88063:CDS |
| TGTCTCAGACTGTACTGAAA+GGG | 0.510423 | 7.1:+69528300 | MS.gene88063:CDS |
| AGAATAAATATTACCTAGGT+GGG | 0.511593 | 7.1:-69525568 | None:intergenic |
| GGACTATGAAAGGGTTGAAA+GGG | 0.513027 | 7.1:+69528234 | MS.gene88063:CDS |
| CGGTTACCACGTTGCAGCGA+AGG | 0.514734 | 7.1:-69527988 | None:intergenic |
| TGAAGCGGCAATTGAGAGGC+GGG | 0.524380 | 7.1:+69529034 | MS.gene88063:CDS |
| CTTACTGGCACAGACAGGCC+TGG | 0.525209 | 7.1:+69527932 | MS.gene88063:CDS |
| GATTCAATCCGTAGACAGAT+CGG | 0.527568 | 7.1:+69529720 | MS.gene88063:CDS |
| TTATATGCAGGGGATGGAGC+TGG | 0.527638 | 7.1:+69529530 | MS.gene88063:intron |
| CAGATTTCAGATAGTAAACC+AGG | 0.531208 | 7.1:-69527950 | None:intergenic |
| AAAACTGCACTTTCACATCC+TGG | 0.532657 | 7.1:+69528163 | MS.gene88063:CDS |
| ACAATATCAAACAACAGCTT+CGG | 0.533003 | 7.1:-69528358 | None:intergenic |
| ATGGTGTGGTTCAGACAGAA+AGG | 0.542138 | 7.1:+69528416 | MS.gene88063:CDS |
| CAATAATCTTTGGATCAACT+GGG | 0.551404 | 7.1:-69529698 | None:intergenic |
| TTCCAGTGGTTGTGCCATAG+AGG | 0.552241 | 7.1:+69528066 | MS.gene88063:CDS |
| AAGAATAAATATTACCTAGG+TGG | 0.554137 | 7.1:-69525569 | None:intergenic |
| GTGGTTCAGACAGAAAGGAC+AGG | 0.555199 | 7.1:+69528421 | MS.gene88063:CDS |
| GCTCAGAGGCTGAGAGAGAA+CGG | 0.556750 | 7.1:+69528997 | MS.gene88063:CDS |
| AATCCAATTGTTGTTCCTTG+AGG | 0.560279 | 7.1:-69529792 | None:intergenic |
| GATCGGCGACACGGTACTGC+AGG | 0.560359 | 7.1:+69529737 | MS.gene88063:CDS |
| GGGACTATGAAAGGGTTGAA+AGG | 0.560708 | 7.1:+69528233 | MS.gene88063:CDS |
| TTGAACTTACTGGCACAGAC+AGG | 0.567860 | 7.1:+69527927 | MS.gene88063:CDS |
| CTGTCTCAGACTGTACTGAA+AGG | 0.574748 | 7.1:+69528299 | MS.gene88063:CDS |
| CTATCCCTATACGTAACTCC+AGG | 0.576701 | 7.1:-69528181 | None:intergenic |
| AGTCATTGATTATATTCAGA+GGG | 0.577703 | 7.1:+69527084 | MS.gene88063:CDS |
| TATGAAAGGGTTGAAAGGGC+AGG | 0.577858 | 7.1:+69528238 | MS.gene88063:CDS |
| AGACCGTGTAGGACTCCTCT+CGG | 0.579915 | 7.1:+69529566 | MS.gene88063:CDS |
| ATCATCTGTTACATGAACTA+CGG | 0.581288 | 7.1:-69528044 | None:intergenic |
| AATTGAGAGGCGGGCATCTG+AGG | 0.581375 | 7.1:+69529043 | MS.gene88063:CDS |
| GATGGAGTTTGGTTTATGGA+TGG | 0.582629 | 7.1:+69526837 | MS.gene88063:CDS |
| CCGTAGACAGATCGGCGACA+CGG | 0.589318 | 7.1:+69529728 | MS.gene88063:CDS |
| GTCTTGAAGCGGCAATTGAG+AGG | 0.589946 | 7.1:+69529030 | MS.gene88063:CDS |
| AATCCCTTATTGTGGAGAGA+CGG | 0.591547 | 7.1:-69528096 | None:intergenic |
| ACAGAGCAAATCCCTTATTG+TGG | 0.596940 | 7.1:-69528104 | None:intergenic |
| TGCTGATAGGGACTATGAAA+GGG | 0.606933 | 7.1:+69528225 | MS.gene88063:CDS |
| AAGTCATTGATTATATTCAG+AGG | 0.614562 | 7.1:+69527083 | MS.gene88063:CDS |
| TTGAAGCGGCAATTGAGAGG+CGG | 0.615320 | 7.1:+69529033 | MS.gene88063:CDS |
| CTTATTGTGGAGAGACGGGA+CGG | 0.622503 | 7.1:-69528091 | None:intergenic |
| TGGTTCAGACAGAAAGGACA+GGG | 0.627734 | 7.1:+69528422 | MS.gene88063:CDS |
| CATAAACCAAACTCCATCAG+AGG | 0.629050 | 7.1:-69526832 | None:intergenic |
| ATAACAGTGTGCTCATCAGT+AGG | 0.632865 | 7.1:-69527905 | None:intergenic |
| AATATCAACAGAAAACGGAA+AGG | 0.638039 | 7.1:+69529638 | MS.gene88063:CDS |
| ACGTCGATGAGAGAGTCTGT+TGG | 0.641528 | 7.1:+69527875 | MS.gene88063:CDS |
| TAAGGAGGATGAACCCACCT+AGG | 0.644112 | 7.1:+69525555 | None:intergenic |
| GACTCCTCTCGGATATCACA+AGG | 0.651775 | 7.1:+69529577 | MS.gene88063:CDS |
| CTTTCACCAAAACCACCTCA+AGG | 0.651932 | 7.1:+69529777 | MS.gene88063:CDS |
| CATGTAACAGATGATTCCAG+TGG | 0.654830 | 7.1:+69528052 | MS.gene88063:CDS |
| GCTTATACAGTGTCTTGAAG+CGG | 0.655208 | 7.1:+69529019 | MS.gene88063:CDS |
| TTGACAGTGTAAACAAACAC+GGG | 0.657246 | 7.1:+69526745 | MS.gene88063:CDS |
| TGATACATAAACTGTTCTCG+CGG | 0.658352 | 7.1:-69529605 | None:intergenic |
| GTTGACAGTGTAAACAAACA+CGG | 0.663549 | 7.1:+69526744 | MS.gene88063:CDS |
| TAACTTGGACTACGTCCAAG+AGG | 0.665875 | 7.1:-69526770 | None:intergenic |
| TATCCGAGAGGAGTCCTACA+CGG | 0.667037 | 7.1:-69529569 | None:intergenic |
| TTGCTCTGTAACGTGCTTCG+GGG | 0.668610 | 7.1:+69528118 | MS.gene88063:CDS |
| CAGTCTGAGACAGTTACATG+TGG | 0.672783 | 7.1:-69528289 | None:intergenic |
| CGCAGACCTTCGCTGCAACG+TGG | 0.674142 | 7.1:+69527982 | MS.gene88063:CDS |
| TGGCTTTCCCATAAGCTCAG+AGG | 0.681534 | 7.1:+69528983 | MS.gene88063:CDS |
| GTCGATGAGAGAGTCTGTTG+GGG | 0.682439 | 7.1:+69527877 | MS.gene88063:CDS |
| TACTGAAAGGGATTATACTG+TGG | 0.689453 | 7.1:+69528312 | MS.gene88063:CDS |
| TTGTGCACAGAAGACCGTGT+AGG | 0.706816 | 7.1:+69529555 | MS.gene88063:CDS |
| AAGCCATACCTGAATAACAG+TGG | 0.722877 | 7.1:-69526566 | None:intergenic |
| AAATCCTTGTGATATCCGAG+AGG | 0.755556 | 7.1:-69529581 | None:intergenic |
| GGTTCAGACAGAAAGGACAG+GGG | 0.787336 | 7.1:+69528423 | MS.gene88063:CDS |
| ATTATGCGTCCAAATCTCGG+CGG | 0.824418 | 7.1:-69528008 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATTATTATTAT+TGG | + | chr7.1:69525647-69525666 | MS.gene88063:intron | 0.0% |
| !! | AATATATAATTGATCAATAA+TGG | - | chr7.1:69527402-69527421 | None:intergenic | 10.0% |
| !!! | ATGTTTTTAAAAATATTGTT+TGG | + | chr7.1:69529429-69529448 | MS.gene88063:intron | 10.0% |
| !!! | TTGTCAATTTTTAATTTTTA+TGG | + | chr7.1:69525813-69525832 | MS.gene88063:intron | 10.0% |
| !! | ACAAAAATCTAATTAATACT+TGG | - | chr7.1:69527009-69527028 | None:intergenic | 15.0% |
| !! | ATTAAGTCTACAAATTAAAT+TGG | - | chr7.1:69527566-69527585 | None:intergenic | 15.0% |
| !! | GTGAATAAAAATTAGTTATA+AGG | - | chr7.1:69529382-69529401 | None:intergenic | 15.0% |
| !!! | AATTCTGCATTTTTATATTA+CGG | - | chr7.1:69527683-69527702 | None:intergenic | 15.0% |
| !!! | ACATATTTATATAGTTTTGT+TGG | - | chr7.1:69526466-69526485 | None:intergenic | 15.0% |
| !!! | GACAATTTTTTTTTTCAAAA+CGG | - | chr7.1:69526940-69526959 | None:intergenic | 15.0% |
| !!! | TTTTGACAATCTATAATTAA+AGG | - | chr7.1:69527782-69527801 | None:intergenic | 15.0% |
| !! | AAGTAAAGTCAAGTTAAAAA+TGG | - | chr7.1:69526380-69526399 | None:intergenic | 20.0% |
| !! | ATGAAGAATAAATATTACCT+AGG | - | chr7.1:69525575-69525594 | None:intergenic | 20.0% |
| !! | ATGTATTGTTAAGTTTCATT+CGG | + | chr7.1:69528844-69528863 | MS.gene88063:intron | 20.0% |
| !! | CAAAAGAAGAAAAAAAAACT+AGG | - | chr7.1:69529126-69529145 | None:intergenic | 20.0% |
| !! | CTATATAAATATGTTTGTGT+TGG | + | chr7.1:69526472-69526491 | MS.gene88063:intron | 20.0% |
| !! | TAAAGGACAACATATTATTA+TGG | - | chr7.1:69527765-69527784 | None:intergenic | 20.0% |
| !! | TTAATGAACTCAAATCAATT+TGG | + | chr7.1:69525977-69525996 | MS.gene88063:intron | 20.0% |
| !! | TTTCCTAATCAAAATTACAT+TGG | + | chr7.1:69527424-69527443 | MS.gene88063:intron | 20.0% |
| !!! | AAACCAATGTAATTTTGATT+AGG | - | chr7.1:69527430-69527449 | None:intergenic | 20.0% |
| !!! | AATTTTCTCTCTTAAACTAT+TGG | + | chr7.1:69526861-69526880 | MS.gene88063:intron | 20.0% |
| !!! | CTAGTTTTTTTTTCTTCTTT+TGG | + | chr7.1:69529124-69529143 | MS.gene88063:intron | 20.0% |
| !!! | TCTTTTCTTTAAAAGAAGTT+AGG | - | chr7.1:69529455-69529474 | None:intergenic | 20.0% |
| !!! | TTTGAAATTGGTTTTGATTT+TGG | + | chr7.1:69527252-69527271 | MS.gene88063:intron | 20.0% |
| !!! | TTTTCATCAAAGTGAATATT+TGG | + | chr7.1:69527356-69527375 | MS.gene88063:intron | 20.0% |
| ! | AACAATTAACCTAATACCAT+TGG | - | chr7.1:69529242-69529261 | None:intergenic | 25.0% |
| ! | AAGAATAAATATTACCTAGG+TGG | - | chr7.1:69525572-69525591 | None:intergenic | 25.0% |
| ! | AAGTTTGTGAAAATATACAG+AGG | - | chr7.1:69526602-69526621 | None:intergenic | 25.0% |
| ! | ACTAAGATATGTTTATATGC+AGG | + | chr7.1:69529518-69529537 | MS.gene88063:intron | 25.0% |
| ! | AGAATAAATATTACCTAGGT+GGG | - | chr7.1:69525571-69525590 | None:intergenic | 25.0% |
| ! | AGTATACCATTGAAGAATAA+GGG | - | chr7.1:69529501-69529520 | None:intergenic | 25.0% |
| ! | AGTTTGTGAAAATATACAGA+GGG | - | chr7.1:69526601-69526620 | None:intergenic | 25.0% |
| ! | CTAAGATATGTTTATATGCA+GGG | + | chr7.1:69529519-69529538 | MS.gene88063:intron | 25.0% |
| ! | GAAAAAAAAACTAGGCTTAA+CGG | - | chr7.1:69529118-69529137 | None:intergenic | 25.0% |
| ! | GAAGAAGACATTATATCTAA+TGG | - | chr7.1:69527711-69527730 | None:intergenic | 25.0% |
| ! | GATTGTCAAAAAAAGTTTGT+AGG | + | chr7.1:69527791-69527810 | MS.gene88063:intron | 25.0% |
| ! | GTCTACAAATTAAATTGGTA+TGG | - | chr7.1:69527561-69527580 | None:intergenic | 25.0% |
| ! | TAAGATATGTTTATATGCAG+GGG | + | chr7.1:69529520-69529539 | MS.gene88063:intron | 25.0% |
| ! | TAGTATACCATTGAAGAATA+AGG | - | chr7.1:69529502-69529521 | None:intergenic | 25.0% |
| ! | TATGAACCTTGTGATTAAAA+AGG | + | chr7.1:69526800-69526819 | MS.gene88063:CDS | 25.0% |
| ! | TTATACAGCAAATGCAAATT+AGG | - | chr7.1:69528904-69528923 | None:intergenic | 25.0% |
| !! | AAAGATAACAGTTTGACTTT+AGG | - | chr7.1:69528660-69528679 | None:intergenic | 25.0% |
| !! | AAGTCATTGATTATATTCAG+AGG | + | chr7.1:69527083-69527102 | MS.gene88063:CDS | 25.0% |
| !! | AATTGTCCCTTTTTATAAGA+CGG | + | chr7.1:69526953-69526972 | MS.gene88063:intron | 25.0% |
| !! | AGTCATTGATTATATTCAGA+GGG | + | chr7.1:69527084-69527103 | MS.gene88063:CDS | 25.0% |
| !! | GGAATATGTAGATTTGAAAT+TGG | + | chr7.1:69527240-69527259 | MS.gene88063:intron | 25.0% |
| !! | TATAAGCCTTTTTAATCACA+AGG | - | chr7.1:69526809-69526828 | None:intergenic | 25.0% |
| !! | TGGTTTTCTGTATTTGTTTA+GGG | + | chr7.1:69528508-69528527 | MS.gene88063:intron | 25.0% |
| !!! | ATTTACGCTATTTTTTACAG+TGG | + | chr7.1:69525721-69525740 | MS.gene88063:intron | 25.0% |
| !!! | CTACAGTCAAATTTTTTTGA+AGG | - | chr7.1:69525749-69525768 | None:intergenic | 25.0% |
| !!! | TTGGTTTTCTGTATTTGTTT+AGG | + | chr7.1:69528507-69528526 | MS.gene88063:intron | 25.0% |
| !!! | TTGTTCAGGAGTTTTATATT+CGG | + | chr7.1:69528952-69528971 | MS.gene88063:intron | 25.0% |
| !!! | TTTTTCAGTGTTTAATGTGA+CGG | + | chr7.1:69527030-69527049 | MS.gene88063:intron | 25.0% |
| !!! | TTTTTTTTTGAAACAGCCAA+TGG | + | chr7.1:69529223-69529242 | MS.gene88063:intron | 25.0% |
| AACTTAACAATACATAAGCC+TGG | - | chr7.1:69528839-69528858 | None:intergenic | 30.0% | |
| AATATCAACAGAAAACGGAA+AGG | + | chr7.1:69529638-69529657 | MS.gene88063:CDS | 30.0% | |
| ACAACAATTGGATTTCTCTT+TGG | + | chr7.1:69529801-69529820 | MS.gene88063:CDS | 30.0% | |
| ACAATATCAAACAACAGCTT+CGG | - | chr7.1:69528361-69528380 | None:intergenic | 30.0% | |
| ACTTGACTTTACTTACCTTA+TGG | + | chr7.1:69526386-69526405 | MS.gene88063:intron | 30.0% | |
| AGTAACTCCGTCTTATAAAA+AGG | - | chr7.1:69526963-69526982 | None:intergenic | 30.0% | |
| ATATGTTTGTGTTGGAATTG+TGG | + | chr7.1:69526480-69526499 | MS.gene88063:intron | 30.0% | |
| ATCAAAGTGAATATTTGGAG+GGG | + | chr7.1:69527361-69527380 | MS.gene88063:intron | 30.0% | |
| ATCATCTGTTACATGAACTA+CGG | - | chr7.1:69528047-69528066 | None:intergenic | 30.0% | |
| ATTGATTATATTCAGAGGGT+AGG | + | chr7.1:69527088-69527107 | MS.gene88063:intron | 30.0% | |
| CAATAATCTTTGGATCAACT+GGG | - | chr7.1:69529701-69529720 | None:intergenic | 30.0% | |
| CATCAAAGTGAATATTTGGA+GGG | + | chr7.1:69527360-69527379 | MS.gene88063:intron | 30.0% | |
| CGGATTGAATCAATAATCTT+TGG | - | chr7.1:69529711-69529730 | None:intergenic | 30.0% | |
| GCAGAAATATCAACAGAAAA+CGG | + | chr7.1:69529633-69529652 | MS.gene88063:CDS | 30.0% | |
| GTAACTCCGTCTTATAAAAA+GGG | - | chr7.1:69526962-69526981 | None:intergenic | 30.0% | |
| TAATAAGTGCTTACGCTATA+AGG | - | chr7.1:69528593-69528612 | None:intergenic | 30.0% | |
| TATGTAAGTTTGAATCCAAG+TGG | + | chr7.1:69526056-69526075 | MS.gene88063:intron | 30.0% | |
| TCAATAATCTTTGGATCAAC+TGG | - | chr7.1:69529702-69529721 | None:intergenic | 30.0% | |
| TCATCAAAGTGAATATTTGG+AGG | + | chr7.1:69527359-69527378 | MS.gene88063:intron | 30.0% | |
| TGGTTACGCATATTCATATA+TGG | - | chr7.1:69525938-69525957 | None:intergenic | 30.0% | |
| TTAATGAACTCGAATCGATT+TGG | + | chr7.1:69526093-69526112 | MS.gene88063:intron | 30.0% | |
| TTAATGAGCTCAAATCGATT+TGG | + | chr7.1:69526203-69526222 | MS.gene88063:intron | 30.0% | |
| TTCATGAACTTGAATCGATT+AGG | + | chr7.1:69526327-69526346 | MS.gene88063:intron | 30.0% | |
| TTTCTGTATTCTTTGAGCAA+AGG | + | chr7.1:69527448-69527467 | MS.gene88063:intron | 30.0% | |
| ! | AATCTTCAAGTTAAGTAAGC+AGG | + | chr7.1:69527206-69527225 | MS.gene88063:intron | 30.0% |
| ! | ATATAGTTGCGAGACTTTTT+GGG | - | chr7.1:69528782-69528801 | None:intergenic | 30.0% |
| ! | ATCAGATTATGTTTGCTGAT+AGG | + | chr7.1:69528212-69528231 | MS.gene88063:CDS | 30.0% |
| ! | ATGAGCTTTTCAAATCAAGT+AGG | - | chr7.1:69529337-69529356 | None:intergenic | 30.0% |
| ! | ATGCAGTATGTAGTTTTTCA+TGG | + | chr7.1:69528397-69528416 | MS.gene88063:CDS | 30.0% |
| ! | GAAATGATCGTTCAACTTTT+TGG | + | chr7.1:69528488-69528507 | MS.gene88063:intron | 30.0% |
| ! | GCGTTATTGACAAAAGTATA+GGG | - | chr7.1:69527602-69527621 | None:intergenic | 30.0% |
| ! | GGTTCATATCTGAAATAACT+TGG | - | chr7.1:69526788-69526807 | None:intergenic | 30.0% |
| ! | TATATAGTTGCGAGACTTTT+TGG | - | chr7.1:69528783-69528802 | None:intergenic | 30.0% |
| ! | TCAGATTATGTTTGCTGATA+GGG | + | chr7.1:69528213-69528232 | MS.gene88063:CDS | 30.0% |
| ! | TGCGTTATTGACAAAAGTAT+AGG | - | chr7.1:69527603-69527622 | None:intergenic | 30.0% |
| !! | TGAAGATTTCTAGCAAAGAA+CGG | - | chr7.1:69527194-69527213 | None:intergenic | 30.0% |
| !!! | AACAAGATTGTTTGTTTTGC+AGG | + | chr7.1:69526722-69526741 | MS.gene88063:intron | 30.0% |
| !!! | TCTCTTTGGAAGTTTTTTCA+AGG | + | chr7.1:69529815-69529834 | MS.gene88063:CDS | 30.0% |
| AAACAGAACCTATGTTTGAC+GGG | - | chr7.1:69528547-69528566 | None:intergenic | 35.0% | |
| AACACACCCTTATTCTTCAA+TGG | + | chr7.1:69529492-69529511 | MS.gene88063:intron | 35.0% | |
| AACTAGATTGTTGCTATGCA+GGG | + | chr7.1:69526513-69526532 | MS.gene88063:intron | 35.0% | |
| AAGGCTTATATTTCCTCTGA+TGG | + | chr7.1:69526819-69526838 | MS.gene88063:CDS | 35.0% | |
| AGTATTATGCGTCCAAATCT+CGG | - | chr7.1:69528014-69528033 | None:intergenic | 35.0% | |
| AGTTACATCAGTGACGTAAA+AGG | - | chr7.1:69529673-69529692 | None:intergenic | 35.0% | |
| ATACTTGGATCAGAAGCAAA+AGG | - | chr7.1:69526994-69527013 | None:intergenic | 35.0% | |
| ATATGTTTATATGCAGGGGA+TGG | + | chr7.1:69529524-69529543 | MS.gene88063:intron | 35.0% | |
| ATATTTCCTCTGATGGAGTT+TGG | + | chr7.1:69526826-69526845 | MS.gene88063:CDS | 35.0% | |
| CAAACAGAACCTATGTTTGA+CGG | - | chr7.1:69528548-69528567 | None:intergenic | 35.0% | |
| CACACTGTTATTGAACTTAC+TGG | + | chr7.1:69527917-69527936 | MS.gene88063:CDS | 35.0% | |
| CAGATTTCAGATAGTAAACC+AGG | - | chr7.1:69527953-69527972 | None:intergenic | 35.0% | |
| CTTACCTTATGGTTGAAATC+CGG | + | chr7.1:69526397-69526416 | MS.gene88063:intron | 35.0% | |
| GAAATCAGCTGATGTTTGTT+TGG | + | chr7.1:69529191-69529210 | MS.gene88063:intron | 35.0% | |
| GAGAATTGTTCATGTTGTTC+AGG | + | chr7.1:69528938-69528957 | MS.gene88063:intron | 35.0% | |
| GGACTTAGAGAAAGAGATAA+AGG | + | chr7.1:69528259-69528278 | MS.gene88063:CDS | 35.0% | |
| GGTAAAACGATCCTAAAGTT+CGG | - | chr7.1:69527296-69527315 | None:intergenic | 35.0% | |
| GTTGAACGATCATTTCCTAA+CGG | - | chr7.1:69528484-69528503 | None:intergenic | 35.0% | |
| GTTGACAGTGTAAACAAACA+CGG | + | chr7.1:69526744-69526763 | MS.gene88063:CDS | 35.0% | |
| TAACAATACATAAGCCTGGT+TGG | - | chr7.1:69528835-69528854 | None:intergenic | 35.0% | |
| TAACTAGATTGTTGCTATGC+AGG | + | chr7.1:69526512-69526531 | MS.gene88063:intron | 35.0% | |
| TACTGAAAGGGATTATACTG+TGG | + | chr7.1:69528312-69528331 | MS.gene88063:CDS | 35.0% | |
| TATGAATATGCGTAACCAAG+TGG | + | chr7.1:69525940-69525959 | MS.gene88063:intron | 35.0% | |
| TCAAAGTGAATATTTGGAGG+GGG | + | chr7.1:69527362-69527381 | MS.gene88063:intron | 35.0% | |
| TGATACATAAACTGTTCTCG+CGG | - | chr7.1:69529608-69529627 | None:intergenic | 35.0% | |
| TTAATGAGCTCGAATCGATT+TGG | + | chr7.1:69526265-69526284 | MS.gene88063:intron | 35.0% | |
| TTACCTTATGGTTGAAATCC+GGG | + | chr7.1:69526398-69526417 | MS.gene88063:intron | 35.0% | |
| TTCTCTCTTAAACTATTGGC+AGG | + | chr7.1:69526865-69526884 | MS.gene88063:intron | 35.0% | |
| TTGAAACAGCCAATGGTATT+AGG | + | chr7.1:69529230-69529249 | MS.gene88063:intron | 35.0% | |
| TTGACAGTGTAAACAAACAC+GGG | + | chr7.1:69526745-69526764 | MS.gene88063:CDS | 35.0% | |
| TTTGAATCCAAGTGGTTAGT+TGG | + | chr7.1:69526126-69526145 | MS.gene88063:intron | 35.0% | |
| ! | AACGGTCTTATAATTAGCGA+CGG | - | chr7.1:69526922-69526941 | None:intergenic | 35.0% |
| ! | AATCCAATTGTTGTTCCTTG+AGG | - | chr7.1:69529795-69529814 | None:intergenic | 35.0% |
| ! | GTATGTAGTTTTTCATGGTG+TGG | + | chr7.1:69528402-69528421 | MS.gene88063:CDS | 35.0% |
| ! | TATAGTTGCGAGACTTTTTG+GGG | - | chr7.1:69528781-69528800 | None:intergenic | 35.0% |
| ! | TGATTTGGAGTACTTGAGTT+TGG | + | chr7.1:69526156-69526175 | MS.gene88063:intron | 35.0% |
| ! | TGCATTTTTATATTACGGCC+AGG | - | chr7.1:69527678-69527697 | None:intergenic | 35.0% |
| ! | TTTTACGTCACTGATGTAAC+TGG | + | chr7.1:69529672-69529691 | MS.gene88063:CDS | 35.0% |
| ! | TTTTATATTCGGCACGTTGA+TGG | + | chr7.1:69528963-69528982 | MS.gene88063:CDS | 35.0% |
| !! | ATATTTTGTTGTCTGCCGTT+AGG | + | chr7.1:69528466-69528485 | MS.gene88063:intron | 35.0% |
| !! | GCTGTTTTATTAAGCTATCC+TGG | + | chr7.1:69528691-69528710 | MS.gene88063:intron | 35.0% |
| !! | GTTAATTTGTTCGTATTCGC+TGG | + | chr7.1:69529259-69529278 | MS.gene88063:intron | 35.0% |
| !! | TTAGTTGGCTCGAATTGATT+TGG | + | chr7.1:69526141-69526160 | MS.gene88063:intron | 35.0% |
| !! | TTTAATGTGACGGATCGAAA+TGG | + | chr7.1:69527040-69527059 | MS.gene88063:CDS | 35.0% |
| AAAACGATCCTAAAGTTCGG+AGG | - | chr7.1:69527293-69527312 | None:intergenic | 40.0% | |
| AAAACTGCACTTTCACATCC+TGG | + | chr7.1:69528163-69528182 | MS.gene88063:CDS | 40.0% | |
| AAATCCTTGTGATATCCGAG+AGG | - | chr7.1:69529584-69529603 | None:intergenic | 40.0% | |
| AACCACTTCGATTCAAACTC+AGG | - | chr7.1:69526233-69526252 | None:intergenic | 40.0% | |
| AACCACTTGGATTCAAACTC+AGG | - | chr7.1:69526123-69526142 | None:intergenic | 40.0% | |
| AAGACAATCCCGTCAAACAT+AGG | + | chr7.1:69528536-69528555 | MS.gene88063:intron | 40.0% | |
| AAGCCATACCTGAATAACAG+TGG | - | chr7.1:69526569-69526588 | None:intergenic | 40.0% | |
| AATCCCGGATTTCAACCATA+AGG | - | chr7.1:69526404-69526423 | None:intergenic | 40.0% | |
| AATCCCTTATTGTGGAGAGA+CGG | - | chr7.1:69528099-69528118 | None:intergenic | 40.0% | |
| ACAGAGCAAATCCCTTATTG+TGG | - | chr7.1:69528107-69528126 | None:intergenic | 40.0% | |
| ACATCCTGGAGTTACGTATA+GGG | + | chr7.1:69528177-69528196 | MS.gene88063:CDS | 40.0% | |
| AGTAAGCAGGACAACGATAT+TGG | + | chr7.1:69527219-69527238 | MS.gene88063:intron | 40.0% | |
| ATAACAGTGTGCTCATCAGT+AGG | - | chr7.1:69527908-69527927 | None:intergenic | 40.0% | |
| ATATGCGTAACCAAGTGGTT+TGG | + | chr7.1:69525945-69525964 | MS.gene88063:intron | 40.0% | |
| ATTTGCTCTGTAACGTGCTT+CGG | + | chr7.1:69528116-69528135 | MS.gene88063:CDS | 40.0% | |
| CAAAGTGAATATTTGGAGGG+GGG | + | chr7.1:69527363-69527382 | MS.gene88063:intron | 40.0% | |
| CATAAACCAAACTCCATCAG+AGG | - | chr7.1:69526835-69526854 | None:intergenic | 40.0% | |
| CATCAGGATGCAGAAAATGA+GGG | - | chr7.1:69527317-69527336 | None:intergenic | 40.0% | |
| CATGTAACAGATGATTCCAG+TGG | + | chr7.1:69528052-69528071 | MS.gene88063:CDS | 40.0% | |
| CGTCAAACATAGGTTCTGTT+TGG | + | chr7.1:69528546-69528565 | MS.gene88063:intron | 40.0% | |
| CTATTAGCTGGAAATTCGCA+TGG | - | chr7.1:69527634-69527653 | None:intergenic | 40.0% | |
| CTTATTTCAAGAAGCTCTCC+AGG | - | chr7.1:69528712-69528731 | None:intergenic | 40.0% | |
| GAGACAGTTACATGTGGAAA+TGG | - | chr7.1:69528286-69528305 | None:intergenic | 40.0% | |
| GAGTTTGAATCCAAGTGGTT+AGG | + | chr7.1:69526123-69526142 | MS.gene88063:intron | 40.0% | |
| GAGTTTGAATCGAAGTGGTT+TGG | + | chr7.1:69526233-69526252 | MS.gene88063:intron | 40.0% | |
| GATTCAATCCGTAGACAGAT+CGG | + | chr7.1:69529720-69529739 | MS.gene88063:CDS | 40.0% | |
| GCTTATACAGTGTCTTGAAG+CGG | + | chr7.1:69529019-69529038 | MS.gene88063:CDS | 40.0% | |
| GGACTATGAAAGGGTTGAAA+GGG | + | chr7.1:69528234-69528253 | MS.gene88063:CDS | 40.0% | |
| GGACTTCATAATTTCCTCTC+TGG | + | chr7.1:69525834-69525853 | MS.gene88063:intron | 40.0% | |
| TACCTGAGTTTGAACATAGC+TGG | + | chr7.1:69526352-69526371 | MS.gene88063:intron | 40.0% | |
| TACCTGAGTTTGAATCCAAG+TGG | + | chr7.1:69526002-69526021 | MS.gene88063:intron | 40.0% | |
| TACCTGAGTTTGAATCGAAG+TGG | + | chr7.1:69526228-69526247 | MS.gene88063:intron | 40.0% | |
| TACTTGAGTTTGGATCCTAG+TGG | + | chr7.1:69526166-69526185 | MS.gene88063:intron | 40.0% | |
| TCTCTTAAACTATTGGCAGG+CGG | + | chr7.1:69526868-69526887 | MS.gene88063:intron | 40.0% | |
| TGAAAACGCCACTGTTATTC+AGG | + | chr7.1:69526558-69526577 | MS.gene88063:CDS | 40.0% | |
| TGAAACAAGTCATTCCAACC+AGG | + | chr7.1:69528818-69528837 | MS.gene88063:intron | 40.0% | |
| TGCTGATAGGGACTATGAAA+GGG | + | chr7.1:69528225-69528244 | MS.gene88063:CDS | 40.0% | |
| TGTCTCAGACTGTACTGAAA+GGG | + | chr7.1:69528300-69528319 | MS.gene88063:CDS | 40.0% | |
| TTCCAGCTATGTTCAAACTC+AGG | - | chr7.1:69526357-69526376 | None:intergenic | 40.0% | |
| TTGCTGATAGGGACTATGAA+AGG | + | chr7.1:69528224-69528243 | MS.gene88063:CDS | 40.0% | |
| ! | CTCTGATGGAGTTTGGTTTA+TGG | + | chr7.1:69526833-69526852 | MS.gene88063:CDS | 40.0% |
| ! | GATGGAGTTTGGTTTATGGA+TGG | + | chr7.1:69526837-69526856 | MS.gene88063:CDS | 40.0% |
| ! | TTTTATATTACGGCCAGGTC+AGG | - | chr7.1:69527673-69527692 | None:intergenic | 40.0% |
| ! | TTTTTGTTGCTCCATCTCTG+TGG | + | chr7.1:69527155-69527174 | MS.gene88063:intron | 40.0% |
| !! | AGTGCAGTTTTTGCTGTCTT+CGG | - | chr7.1:69528154-69528173 | None:intergenic | 40.0% |
| !! | CCTCTCTGGAATGATAATCT+GGG | + | chr7.1:69525848-69525867 | MS.gene88063:intron | 40.0% |
| !! | CTGGGTTTGTTGCATGTATT+TGG | + | chr7.1:69525866-69525885 | MS.gene88063:intron | 40.0% |
| !! | GGTTTGTTGCATGTATTTGG+TGG | + | chr7.1:69525869-69525888 | MS.gene88063:intron | 40.0% |
| !! | TCCTCTCTGGAATGATAATC+TGG | + | chr7.1:69525847-69525866 | MS.gene88063:intron | 40.0% |
| !!! | GACTTTTTGGGGAGTGTTTA+TGG | - | chr7.1:69528770-69528789 | None:intergenic | 40.0% |
| AAACAAACACGGGATCCTCT+TGG | + | chr7.1:69526755-69526774 | MS.gene88063:CDS | 45.0% | |
| AAATCACCCTTCCACAGAGA+TGG | - | chr7.1:69527169-69527188 | None:intergenic | 45.0% | |
| ACCACTTGAACCTAACCACT+TGG | - | chr7.1:69526308-69526327 | None:intergenic | 45.0% | |
| ACCACTTGAGCTTAACCACT+TGG | - | chr7.1:69526074-69526093 | None:intergenic | 45.0% | |
| ACGCCACTGTTATTCAGGTA+TGG | + | chr7.1:69526563-69526582 | MS.gene88063:intron | 45.0% | |
| AGCCAATTAACCACTTGAGC+CGG | - | chr7.1:69526029-69526048 | None:intergenic | 45.0% | |
| AGGTTGTGTGTATGAACCTG+CGG | + | chr7.1:69527468-69527487 | MS.gene88063:intron | 45.0% | |
| AGTTTCATTCGGTCAGAGCA+TGG | + | chr7.1:69528855-69528874 | MS.gene88063:intron | 45.0% | |
| ATCAATCGCCTCCGAACTTT+AGG | + | chr7.1:69527282-69527301 | MS.gene88063:intron | 45.0% | |
| ATCCCTTATTGTGGAGAGAC+GGG | - | chr7.1:69528098-69528117 | None:intergenic | 45.0% | |
| ATGGTGTGGTTCAGACAGAA+AGG | + | chr7.1:69528416-69528435 | MS.gene88063:CDS | 45.0% | |
| ATGGTTGAAATCCGGGATTC+CGG | + | chr7.1:69526405-69526424 | MS.gene88063:intron | 45.0% | |
| ATTATGCGTCCAAATCTCGG+CGG | - | chr7.1:69528011-69528030 | None:intergenic | 45.0% | |
| ATTCGAGCCAACTAACCACT+TGG | - | chr7.1:69526136-69526155 | None:intergenic | 45.0% | |
| CACATCCTGGAGTTACGTAT+AGG | + | chr7.1:69528176-69528195 | MS.gene88063:CDS | 45.0% | |
| CATCTCGGCTAACTATTAGC+TGG | - | chr7.1:69527646-69527665 | None:intergenic | 45.0% | |
| CCACCTCAAGGAACAACAAT+TGG | + | chr7.1:69529789-69529808 | MS.gene88063:CDS | 45.0% | |
| CCCAGATTATCATTCCAGAG+AGG | - | chr7.1:69525851-69525870 | None:intergenic | 45.0% | |
| CTATCCCTATACGTAACTCC+AGG | - | chr7.1:69528184-69528203 | None:intergenic | 45.0% | |
| CTCATCGACGTTTCAAAGCT+CGG | - | chr7.1:69527866-69527885 | None:intergenic | 45.0% | |
| CTCTTAAACTATTGGCAGGC+GGG | + | chr7.1:69526869-69526888 | MS.gene88063:intron | 45.0% | |
| CTGTCTCAGACTGTACTGAA+AGG | + | chr7.1:69528299-69528318 | MS.gene88063:CDS | 45.0% | |
| CTTTCACCAAAACCACCTCA+AGG | + | chr7.1:69529777-69529796 | MS.gene88063:CDS | 45.0% | |
| GACCACTTGGATTCAAACTC+AGG | - | chr7.1:69526007-69526026 | None:intergenic | 45.0% | |
| GAGTTTGAATCCAAGTGGTC+CGG | + | chr7.1:69526007-69526026 | MS.gene88063:intron | 45.0% | |
| GAGTTTGGATCCTAGTGGTT+CGG | + | chr7.1:69526171-69526190 | MS.gene88063:intron | 45.0% | |
| GCATCAGGATGCAGAAAATG+AGG | - | chr7.1:69527318-69527337 | None:intergenic | 45.0% | |
| GGGACTATGAAAGGGTTGAA+AGG | + | chr7.1:69528233-69528252 | MS.gene88063:CDS | 45.0% | |
| GTTTCATTCGGTCAGAGCAT+GGG | + | chr7.1:69528856-69528875 | MS.gene88063:intron | 45.0% | |
| TAACTTGGACTACGTCCAAG+AGG | - | chr7.1:69526773-69526792 | None:intergenic | 45.0% | |
| TATGAAAGGGTTGAAAGGGC+AGG | + | chr7.1:69528238-69528257 | MS.gene88063:CDS | 45.0% | |
| TCCAAGTGGTTAAGCTCAAG+TGG | + | chr7.1:69526070-69526089 | MS.gene88063:intron | 45.0% | |
| TCCAAGTGGTTAGGTTCAAG+TGG | + | chr7.1:69526304-69526323 | MS.gene88063:intron | 45.0% | |
| TGGTTCAGACAGAAAGGACA+GGG | + | chr7.1:69528422-69528441 | MS.gene88063:CDS | 45.0% | |
| TTGAACTTACTGGCACAGAC+AGG | + | chr7.1:69527927-69527946 | MS.gene88063:CDS | 45.0% | |
| TTTGCTCTGTAACGTGCTTC+GGG | + | chr7.1:69528117-69528136 | MS.gene88063:CDS | 45.0% | |
| ! | CAGTCTGAGACAGTTACATG+TGG | - | chr7.1:69528292-69528311 | None:intergenic | 45.0% |
| ! | CCAATTGTTGTTCCTTGAGG+TGG | - | chr7.1:69529792-69529811 | None:intergenic | 45.0% |
| ! | GGTCTTATAATTAGCGACGG+AGG | - | chr7.1:69526919-69526938 | None:intergenic | 45.0% |
| ! | GTTGTTCCTTGAGGTGGTTT+TGG | - | chr7.1:69529786-69529805 | None:intergenic | 45.0% |
| !! | AAAATAGATAAAATTATAAA+AGG | + | chr7.1:69529308-69529327 | MS.gene88063:intron | 5.0% |
| ACCACTTGAGCCAAACCACT+TGG | - | chr7.1:69525958-69525977 | None:intergenic | 50.0% | |
| ACGTCGATGAGAGAGTCTGT+TGG | + | chr7.1:69527875-69527894 | MS.gene88063:CDS | 50.0% | |
| AGAAAGGACAGGGGCTTATC+AGG | + | chr7.1:69528432-69528451 | MS.gene88063:CDS | 50.0% | |
| ATCCTCTATGGCACAACCAC+TGG | - | chr7.1:69528071-69528090 | None:intergenic | 50.0% | |
| ATGAACCTGCGGGATTCATC+TGG | + | chr7.1:69527479-69527498 | MS.gene88063:intron | 50.0% | |
| CATGCGCTTGAAACTGTGTG+CGG | - | chr7.1:69527506-69527525 | None:intergenic | 50.0% | |
| CGACAGCTAGATCATGCATC+AGG | - | chr7.1:69527333-69527352 | None:intergenic | 50.0% | |
| CGTCGATGAGAGAGTCTGTT+GGG | + | chr7.1:69527876-69527895 | MS.gene88063:CDS | 50.0% | |
| CTCTCAGCCTCTGAGCTTAT+GGG | - | chr7.1:69528993-69529012 | None:intergenic | 50.0% | |
| CTTATTGTGGAGAGACGGGA+CGG | - | chr7.1:69528094-69528113 | None:intergenic | 50.0% | |
| GACTCCTCTCGGATATCACA+AGG | + | chr7.1:69529577-69529596 | MS.gene88063:CDS | 50.0% | |
| GGTTCAGACAGAAAGGACAG+GGG | + | chr7.1:69528423-69528442 | MS.gene88063:CDS | 50.0% | |
| GGTTGTGTGTATGAACCTGC+GGG | + | chr7.1:69527469-69527488 | MS.gene88063:intron | 50.0% | |
| GTCCCGTCTCTCCACAATAA+GGG | + | chr7.1:69528093-69528112 | MS.gene88063:CDS | 50.0% | |
| GTCCGGCTCAAGTGGTTAAT+TGG | + | chr7.1:69526024-69526043 | MS.gene88063:intron | 50.0% | |
| GTCGATGAGAGAGTCTGTTG+GGG | + | chr7.1:69527877-69527896 | MS.gene88063:CDS | 50.0% | |
| GTCTTGAAGCGGCAATTGAG+AGG | + | chr7.1:69529030-69529049 | MS.gene88063:CDS | 50.0% | |
| GTGGTTCAGACAGAAAGGAC+AGG | + | chr7.1:69528421-69528440 | MS.gene88063:CDS | 50.0% | |
| GTTGCTCCATCTCTGTGGAA+GGG | + | chr7.1:69527160-69527179 | MS.gene88063:intron | 50.0% | |
| TATCCGAGAGGAGTCCTACA+CGG | - | chr7.1:69529572-69529591 | None:intergenic | 50.0% | |
| TCTCTCAGCCTCTGAGCTTA+TGG | - | chr7.1:69528994-69529013 | None:intergenic | 50.0% | |
| TGGCTTTCCCATAAGCTCAG+AGG | + | chr7.1:69528983-69529002 | MS.gene88063:CDS | 50.0% | |
| TGTTGCTCCATCTCTGTGGA+AGG | + | chr7.1:69527159-69527178 | MS.gene88063:intron | 50.0% | |
| TTATATGCAGGGGATGGAGC+TGG | + | chr7.1:69529530-69529549 | MS.gene88063:intron | 50.0% | |
| TTCCAGTGGTTGTGCCATAG+AGG | + | chr7.1:69528066-69528085 | MS.gene88063:CDS | 50.0% | |
| TTGAAGCGGCAATTGAGAGG+CGG | + | chr7.1:69529033-69529052 | MS.gene88063:CDS | 50.0% | |
| TTGCTCTGTAACGTGCTTCG+GGG | + | chr7.1:69528118-69528137 | MS.gene88063:CDS | 50.0% | |
| TTGGTCCTAACCCTCTGACT+CGG | - | chr7.1:69526447-69526466 | None:intergenic | 50.0% | |
| ! | ACCAAGTGGTTTGGCTCAAG+TGG | + | chr7.1:69525954-69525973 | MS.gene88063:intron | 50.0% |
| ! | TCGAAGTGGTTTGGCTCAAG+TGG | + | chr7.1:69526242-69526261 | MS.gene88063:intron | 50.0% |
| AATTGAGAGGCGGGCATCTG+AGG | + | chr7.1:69529043-69529062 | MS.gene88063:CDS | 55.0% | |
| ACCACTTGAGCCGAACCACT+AGG | - | chr7.1:69526184-69526203 | None:intergenic | 55.0% | |
| ACGTGGTAACCGCCGAGATT+TGG | + | chr7.1:69527999-69528018 | MS.gene88063:CDS | 55.0% | |
| AGACCGTGTAGGACTCCTCT+CGG | + | chr7.1:69529566-69529585 | MS.gene88063:CDS | 55.0% | |
| CATTCGGTCAGAGCATGGGT+TGG | + | chr7.1:69528860-69528879 | MS.gene88063:intron | 55.0% | |
| CGTCCCGTCTCTCCACAATA+AGG | + | chr7.1:69528092-69528111 | MS.gene88063:CDS | 55.0% | |
| CTTAACGGCCTCAAAGAGCG+AGG | - | chr7.1:69529103-69529122 | None:intergenic | 55.0% | |
| GCCAGGTCAGGTCAACATCT+CGG | - | chr7.1:69527661-69527680 | None:intergenic | 55.0% | |
| GCTCAGAGGCTGAGAGAGAA+CGG | + | chr7.1:69528997-69529016 | MS.gene88063:CDS | 55.0% | |
| GGGCTACTAATCCGGAATCC+CGG | - | chr7.1:69526419-69526438 | None:intergenic | 55.0% | |
| TGAAGCGGCAATTGAGAGGC+GGG | + | chr7.1:69529034-69529053 | MS.gene88063:CDS | 55.0% | |
| TGGTCCTAACCCTCTGACTC+GGG | - | chr7.1:69526446-69526465 | None:intergenic | 55.0% | |
| ! | TCCTAGTGGTTCGGCTCAAG+TGG | + | chr7.1:69526180-69526199 | MS.gene88063:intron | 55.0% |
| !! | CTAACCCTCTGACTCGGGAA+GGG | - | chr7.1:69526441-69526460 | None:intergenic | 55.0% |
| !! | TAACCCTCTGACTCGGGAAG+GGG | - | chr7.1:69526440-69526459 | None:intergenic | 55.0% |
| ACCACTTGAGCCGGACCACT+TGG | - | chr7.1:69526020-69526039 | None:intergenic | 60.0% | |
| CCGTAGACAGATCGGCGACA+CGG | + | chr7.1:69529728-69529747 | MS.gene88063:CDS | 60.0% | |
| CCGTGTCGCCGATCTGTCTA+CGG | - | chr7.1:69529731-69529750 | None:intergenic | 60.0% | |
| CCTTCCCGAGTCAGAGGGTT+AGG | + | chr7.1:69526439-69526458 | MS.gene88063:intron | 60.0% | |
| CGGGAAGGGGGCTACTAATC+CGG | - | chr7.1:69526427-69526446 | None:intergenic | 60.0% | |
| CGGTTACCACGTTGCAGCGA+AGG | - | chr7.1:69527991-69528010 | None:intergenic | 60.0% | |
| CTTACTGGCACAGACAGGCC+TGG | + | chr7.1:69527932-69527951 | MS.gene88063:CDS | 60.0% | |
| GAGACGGGACGGATCCTCTA+TGG | - | chr7.1:69528083-69528102 | None:intergenic | 60.0% | |
| GAGCGAGGTGTGGAGCTTCT+AGG | - | chr7.1:69529088-69529107 | None:intergenic | 60.0% | |
| GCCGAGATGTTGACCTGACC+TGG | + | chr7.1:69527657-69527676 | MS.gene88063:intron | 60.0% | |
| GCTCCACACCTCGCTCTTTG+AGG | + | chr7.1:69529092-69529111 | MS.gene88063:intron | 60.0% | |
| TCCAAGTGGTCCGGCTCAAG+TGG | + | chr7.1:69526016-69526035 | MS.gene88063:intron | 60.0% | |
| !! | AACCCTCTGACTCGGGAAGG+GGG | - | chr7.1:69526439-69526458 | None:intergenic | 60.0% |
| !! | CCTAACCCTCTGACTCGGGA+AGG | - | chr7.1:69526442-69526461 | None:intergenic | 60.0% |
| AGCCCCCTTCCCGAGTCAGA+GGG | + | chr7.1:69526434-69526453 | MS.gene88063:intron | 65.0% | |
| CGCAGACCTTCGCTGCAACG+TGG | + | chr7.1:69527982-69528001 | MS.gene88063:CDS | 65.0% | |
| CGGCCTCAAAGAGCGAGGTG+TGG | - | chr7.1:69529098-69529117 | None:intergenic | 65.0% | |
| GATCGGCGACACGGTACTGC+AGG | + | chr7.1:69529737-69529756 | MS.gene88063:CDS | 65.0% | |
| GCGGACCAGATGAATCCCGC+AGG | - | chr7.1:69527487-69527506 | None:intergenic | 65.0% | |
| TAGCCCCCTTCCCGAGTCAG+AGG | + | chr7.1:69526433-69526452 | MS.gene88063:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 69525563 | 69529881 | 69525563 | ID=MS.gene88063 |
| chr7.1 | mRNA | 69525563 | 69529881 | 69525563 | ID=MS.gene88063.t1;Parent=MS.gene88063 |
| chr7.1 | exon | 69525563 | 69525576 | 69525563 | ID=MS.gene88063.t1.exon1;Parent=MS.gene88063.t1 |
| chr7.1 | CDS | 69525563 | 69525576 | 69525563 | ID=cds.MS.gene88063.t1;Parent=MS.gene88063.t1 |
| chr7.1 | exon | 69526534 | 69526579 | 69526534 | ID=MS.gene88063.t1.exon2;Parent=MS.gene88063.t1 |
| chr7.1 | CDS | 69526534 | 69526579 | 69526534 | ID=cds.MS.gene88063.t1;Parent=MS.gene88063.t1 |
| chr7.1 | exon | 69526744 | 69526858 | 69526744 | ID=MS.gene88063.t1.exon3;Parent=MS.gene88063.t1 |
| chr7.1 | CDS | 69526744 | 69526858 | 69526744 | ID=cds.MS.gene88063.t1;Parent=MS.gene88063.t1 |
| chr7.1 | exon | 69527038 | 69527105 | 69527038 | ID=MS.gene88063.t1.exon4;Parent=MS.gene88063.t1 |
| chr7.1 | CDS | 69527038 | 69527105 | 69527038 | ID=cds.MS.gene88063.t1;Parent=MS.gene88063.t1 |
| chr7.1 | exon | 69527848 | 69528453 | 69527848 | ID=MS.gene88063.t1.exon5;Parent=MS.gene88063.t1 |
| chr7.1 | CDS | 69527848 | 69528453 | 69527848 | ID=cds.MS.gene88063.t1;Parent=MS.gene88063.t1 |
| chr7.1 | exon | 69528960 | 69529064 | 69528960 | ID=MS.gene88063.t1.exon6;Parent=MS.gene88063.t1 |
| chr7.1 | CDS | 69528960 | 69529064 | 69528960 | ID=cds.MS.gene88063.t1;Parent=MS.gene88063.t1 |
| chr7.1 | exon | 69529540 | 69529881 | 69529540 | ID=MS.gene88063.t1.exon7;Parent=MS.gene88063.t1 |
| chr7.1 | CDS | 69529540 | 69529881 | 69529540 | ID=cds.MS.gene88063.t1;Parent=MS.gene88063.t1 |
| Gene Sequence |
| Protein sequence |
