Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91519.t1 | AES77415.2 | 88.7 | 478 | 48 | 2 | 1 | 478 | 1 | 472 | 2.20E-185 | 659.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91519.t1 | G7L0X5 | 88.7 | 478 | 48 | 2 | 1 | 478 | 1 | 472 | 1.6e-185 | 659.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051756 | MS.gene91519 | -0.813021 | 3.16E-51 | -1.69E-46 |
| MS.gene052818 | MS.gene91519 | 0.80324 | 3.83E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene91519 | 0.819764 | 9.78E-53 | -1.69E-46 |
| MS.gene05469 | MS.gene91519 | -0.828511 | 8.63E-55 | -1.69E-46 |
| MS.gene056986 | MS.gene91519 | -0.80437 | 2.23E-49 | -1.69E-46 |
| MS.gene059872 | MS.gene91519 | 0.816634 | 5.00E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene91519 | -0.843801 | 1.12E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene91519 | MS.gene05659 | PPI |
| MS.gene91519 | MS.gene53118 | PPI |
| MS.gene91519 | MS.gene78555 | PPI |
| MS.gene21656 | MS.gene91519 | PPI |
| MS.gene91519 | MS.gene04185 | PPI |
| MS.gene91519 | MS.gene072735 | PPI |
| MS.gene91519 | MS.gene55323 | PPI |
| MS.gene91519 | MS.gene04307 | PPI |
| MS.gene94960 | MS.gene91519 | PPI |
| MS.gene85900 | MS.gene91519 | PPI |
| MS.gene91519 | MS.gene22316 | PPI |
| MS.gene91519 | MS.gene024674 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91519.t1 | MTR_7g010340 | 84.706 | 595 | 56 | 4 | 1 | 595 | 1 | 560 | 0.0 | 979 |
| MS.gene91519.t1 | MTR_7g010340 | 77.165 | 127 | 17 | 2 | 522 | 636 | 434 | 560 | 2.65e-51 | 187 |
| MS.gene91519.t1 | MTR_7g010340 | 80.556 | 108 | 21 | 0 | 553 | 660 | 436 | 543 | 9.91e-47 | 174 |
| MS.gene91519.t1 | MTR_7g010340 | 82.185 | 595 | 55 | 5 | 1 | 595 | 1 | 544 | 0.0 | 936 |
| MS.gene91519.t1 | MTR_7g010340 | 77.165 | 127 | 17 | 2 | 522 | 636 | 418 | 544 | 2.00e-51 | 187 |
| MS.gene91519.t1 | MTR_7g010340 | 80.556 | 108 | 21 | 0 | 553 | 660 | 420 | 527 | 7.53e-47 | 174 |
| MS.gene91519.t1 | MTR_5g008420 | 56.716 | 737 | 167 | 19 | 1 | 603 | 1 | 719 | 0.0 | 650 |
| MS.gene91519.t1 | MTR_7g010360 | 66.275 | 255 | 47 | 6 | 1 | 235 | 1 | 236 | 6.23e-83 | 277 |
| MS.gene91519.t1 | MTR_1g016760 | 28.521 | 284 | 146 | 13 | 121 | 370 | 106 | 366 | 4.37e-14 | 75.9 |
| MS.gene91519.t1 | MTR_3g104280 | 27.798 | 277 | 151 | 12 | 127 | 370 | 86 | 346 | 8.18e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91519.t1 | AT4G10070 | 33.657 | 618 | 275 | 31 | 1 | 528 | 1 | 573 | 5.11e-48 | 180 |
| MS.gene91519.t1 | AT1G33680 | 32.381 | 420 | 195 | 16 | 25 | 377 | 92 | 489 | 1.34e-42 | 165 |
Find 256 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCAATTTGAAGGATCTTT+TGG | 0.224942 | 7.1:+85140983 | MS.gene91519:CDS |
| ACCAGGCGAGATTCCGTATC+AGG | 0.257233 | 7.1:+85146122 | MS.gene91519:CDS |
| ACCAGGCGAGATTCCGTATC+AGG | 0.257233 | 7.1:+85146578 | MS.gene91519:CDS |
| CAGTTTCTCACTTTCTCATT+TGG | 0.272778 | 7.1:-85141728 | None:intergenic |
| ATGTTGTACCTAGGTAATTC+TGG | 0.295808 | 7.1:-85138846 | None:intergenic |
| TTTCAGCATGATACTTCTTC+TGG | 0.297812 | 7.1:+85139533 | MS.gene91519:CDS |
| TCATATGCACCTACTCCTTA+TGG | 0.300051 | 7.1:+85145685 | MS.gene91519:CDS |
| GAAAGGACTGTCCAAGTTAC+TGG | 0.320619 | 7.1:+85142544 | MS.gene91519:CDS |
| CTGAACAGGGGATGGACTTA+TGG | 0.321988 | 7.1:-85145914 | None:intergenic |
| TTCTTTAGAATCATCGGCTT+CGG | 0.324296 | 7.1:-85142524 | None:intergenic |
| CCAAGGAGCAGTTACGGTTC+TGG | 0.331193 | 7.1:+85145730 | MS.gene91519:CDS |
| TAATTGTAATTAATCTGAAC+AGG | 0.338077 | 7.1:-85145928 | None:intergenic |
| AAGTTTATCACCTTCTCATT+TGG | 0.340261 | 7.1:-85141167 | None:intergenic |
| ATAAGGACCGGTACAGTGTT+GGG | 0.343519 | 7.1:-85145881 | None:intergenic |
| GATCTGGTGGTCCACCACTA+TGG | 0.343715 | 7.1:+85145584 | MS.gene91519:CDS |
| AGTTGTTCAATTGATTTAGA+TGG | 0.351055 | 7.1:-85139485 | None:intergenic |
| GGTCAGCAAGGTTCACATTA+TGG | 0.354937 | 7.1:+85145607 | MS.gene91519:CDS |
| TATGGCAGGCCACCATTGTT+TGG | 0.373347 | 7.1:+85146165 | MS.gene91519:CDS |
| TATGGCAGGCCACCATTGTT+TGG | 0.373347 | 7.1:+85146288 | MS.gene91519:CDS |
| TATGGCAGGCCACCATTGTT+TGG | 0.374810 | 7.1:+85146375 | MS.gene91519:CDS |
| TATCTCAGGCCACCATTGTT+TGG | 0.375787 | 7.1:+85146498 | MS.gene91519:CDS |
| TCTTTAGAATCATCGGCTTC+GGG | 0.381660 | 7.1:-85142523 | None:intergenic |
| CGCCTGGTTGAGTGGCTCTA+GGG | 0.386919 | 7.1:-85146230 | None:intergenic |
| CGCCTGGTTGAGTGGCTCTA+GGG | 0.386919 | 7.1:-85146440 | None:intergenic |
| CGCCTGGTTGAGTGGCTCTA+GGG | 0.386919 | 7.1:-85146563 | None:intergenic |
| CTGTGAACATGGCATCCATT+AGG | 0.387204 | 7.1:-85141028 | None:intergenic |
| CTCCCCTGCTCAGGCTATTG+TGG | 0.387651 | 7.1:+85141679 | MS.gene91519:CDS |
| CTCCTCAACGAGAATCTCTT+TGG | 0.388726 | 7.1:-85139462 | None:intergenic |
| AACGAGAATCTCTTTGGTAT+TGG | 0.395832 | 7.1:-85139456 | None:intergenic |
| AATTGAGGTTCCTAGCAATA+AGG | 0.397890 | 7.1:+85139601 | MS.gene91519:CDS |
| AAGGCCTCACCAGAGTTTGC+AGG | 0.398717 | 7.1:+85145762 | MS.gene91519:CDS |
| AGGGGCCGCCCTCACACAAC+AGG | 0.399074 | 7.1:+85145782 | MS.gene91519:CDS |
| ACTTATGGCCGAAGAAGAAT+TGG | 0.406832 | 7.1:+85138723 | None:intergenic |
| ATCTGGTGGTCCACCACTAT+GGG | 0.410501 | 7.1:+85145585 | MS.gene91519:CDS |
| TCCCCTGCTCAGGCTATTGT+GGG | 0.411748 | 7.1:+85141680 | MS.gene91519:CDS |
| TTGCTTGAGCCCAGGCTTGA+GGG | 0.412088 | 7.1:-85145999 | None:intergenic |
| AAGGACAACATCCAGTCTTA+TGG | 0.414360 | 7.1:+85146658 | MS.gene91519:CDS |
| TCGCCTGGTTGAGTGGCTCT+AGG | 0.418678 | 7.1:-85146108 | None:intergenic |
| TCGCCTGGTTGAGTGGCTCT+AGG | 0.418678 | 7.1:-85146231 | None:intergenic |
| TCGCCTGGTTGAGTGGCTCT+AGG | 0.418678 | 7.1:-85146441 | None:intergenic |
| TCGCCTGGTTGAGTGGCTCT+AGG | 0.418678 | 7.1:-85146564 | None:intergenic |
| AACAACAACCAATTCTTCTT+CGG | 0.421576 | 7.1:-85138731 | None:intergenic |
| GCCTCTTATCACCAGTAACT+TGG | 0.424651 | 7.1:-85142555 | None:intergenic |
| AACAGGGGTTATGATCATTA+TGG | 0.425468 | 7.1:+85145799 | MS.gene91519:CDS |
| GATGCACCTCCACAGCAGTA+TGG | 0.435538 | 7.1:+85146024 | MS.gene91519:CDS |
| ATATGAGTTCGAAAACCTAA+TGG | 0.435925 | 7.1:+85141013 | MS.gene91519:CDS |
| TACCGTCCGCCACAAGGATC+TGG | 0.447453 | 7.1:+85145568 | MS.gene91519:CDS |
| GTGGCGGACGGTAGGCCTGC+TGG | 0.447974 | 7.1:-85145558 | None:intergenic |
| GATTGATTATGAGAGGGATA+TGG | 0.448365 | 7.1:-85145664 | None:intergenic |
| CTTTAAGGAGTTCAATTTGA+AGG | 0.450357 | 7.1:+85140974 | MS.gene91519:intron |
| CATGGCAGGCCACCATTGTA+TGG | 0.454068 | 7.1:+85146621 | MS.gene91519:CDS |
| GAAATTCCACAGGCTGATGC+TGG | 0.457417 | 7.1:+85141122 | MS.gene91519:intron |
| TAGGGTGGCCGCCATAAGAC+TGG | 0.458568 | 7.1:-85146669 | None:intergenic |
| GACAAAGGAAGCCTTGAGTC+AGG | 0.459926 | 7.1:+85142600 | MS.gene91519:CDS |
| GCCAGAGGAAAATGCTCATT+CGG | 0.461954 | 7.1:+85139382 | MS.gene91519:CDS |
| TGCATCATTTGCTTGAGCCC+AGG | 0.464220 | 7.1:-85146007 | None:intergenic |
| TATGGAAAGCCACCATTGTA+TGG | 0.466268 | 7.1:+85146042 | MS.gene91519:CDS |
| GAAATTCCACAGGCTGATGC+TGG | 0.467198 | 7.1:+85141626 | MS.gene91519:intron |
| TGATCATTATGGTGGACAAA+GGG | 0.467199 | 7.1:+85145810 | MS.gene91519:CDS |
| GAGCAGTTACGGTTCTGGTT+GGG | 0.467510 | 7.1:+85145735 | MS.gene91519:CDS |
| TCGAGGCCTCTCCCCTGCTC+AGG | 0.468246 | 7.1:+85141670 | MS.gene91519:CDS |
| TGGAAATTATCCTCAACATA+TGG | 0.468726 | 7.1:+85145705 | MS.gene91519:CDS |
| GATAGATCTGGGATGCGGGG+CGG | 0.470004 | 7.1:-85145857 | None:intergenic |
| CCTCCATATGGATATTGTGC+AGG | 0.471773 | 7.1:-85145964 | None:intergenic |
| CCCTGATACGGAATCTCGCC+TGG | 0.475637 | 7.1:-85146123 | None:intergenic |
| CCCTGATACGGAATCTCGCC+TGG | 0.475637 | 7.1:-85146579 | None:intergenic |
| GGACAACATCCAGAGTCTTA+TGG | 0.475815 | 7.1:+85146204 | MS.gene91519:CDS |
| GGACAACATCCAGAGTCTTA+TGG | 0.475815 | 7.1:+85146414 | MS.gene91519:CDS |
| TAAAGATAATTCAGAAGAAA+CGG | 0.480498 | 7.1:+85139424 | MS.gene91519:CDS |
| GGGGATAGATCTGGGATGCG+GGG | 0.482378 | 7.1:-85145860 | None:intergenic |
| GGCCTGCCATGTGATTGTGC+TGG | 0.483736 | 7.1:-85146609 | None:intergenic |
| TCATTTGGAACTTCACGTGC+AGG | 0.483750 | 7.1:-85141152 | None:intergenic |
| ATCAGGTGGTTTCAGCCAGC+AGG | 0.484565 | 7.1:+85145543 | MS.gene91519:CDS |
| CCAGAACCGTAACTGCTCCT+TGG | 0.490935 | 7.1:-85145730 | None:intergenic |
| AGTCCTTTCTTTAGAATCAT+CGG | 0.492156 | 7.1:-85142530 | None:intergenic |
| GTTGTGTCAGACCTGGATAT+AGG | 0.492547 | 7.1:-85139566 | None:intergenic |
| GCCCAGGCTTGAGGGTAGGT+TGG | 0.492941 | 7.1:-85145991 | None:intergenic |
| TAGCCTGTCAAGTCATCATC+AGG | 0.494848 | 7.1:+85145526 | MS.gene91519:intron |
| ATCCAACCTACCCTCAAGCC+TGG | 0.495983 | 7.1:+85145989 | MS.gene91519:CDS |
| CTCCAGCACAATCATATCTC+AGG | 0.497449 | 7.1:+85146484 | MS.gene91519:CDS |
| AGGGCGGCCCCTGCAAACTC+TGG | 0.497694 | 7.1:-85145771 | None:intergenic |
| GTATCTAACCTCTGCACTCA+TGG | 0.499696 | 7.1:-85141414 | None:intergenic |
| CGCCTGGTTGAGTGGCTCTA+GGG | 0.500281 | 7.1:-85146107 | None:intergenic |
| TGTTGAGGATAATTTCCATA+AGG | 0.501436 | 7.1:-85145700 | None:intergenic |
| GATCCCACAATAGCCTGAGC+AGG | 0.502943 | 7.1:-85141683 | None:intergenic |
| TCCAAGTTACTGGTGATAAG+AGG | 0.505553 | 7.1:+85142554 | MS.gene91519:CDS |
| TCTACTCCAGCACAATCATA+TGG | 0.505828 | 7.1:+85146147 | MS.gene91519:CDS |
| GCCTGGTTGAGTGGCTCTAG+GGG | 0.506058 | 7.1:-85146229 | None:intergenic |
| GCCTGGTTGAGTGGCTCTAG+GGG | 0.506058 | 7.1:-85146439 | None:intergenic |
| GCCTGGTTGAGTGGCTCTAG+GGG | 0.506058 | 7.1:-85146562 | None:intergenic |
| CTTATGGAGGGTAAAGGATA+AGG | 0.506258 | 7.1:-85145898 | None:intergenic |
| TTTGCTTGAGCCCAGGCTTG+AGG | 0.508013 | 7.1:-85146000 | None:intergenic |
| GGTTCTACTCCAGCACCATA+TGG | 0.508243 | 7.1:+85146357 | MS.gene91519:CDS |
| CCATGATACGGAATCTCGCC+TGG | 0.509473 | 7.1:-85146336 | None:intergenic |
| CCATGATACGGAATCTCGCC+TGG | 0.509473 | 7.1:-85146456 | None:intergenic |
| AGACAAGGCAGAAAAGCTAT+TGG | 0.511880 | 7.1:+85141388 | MS.gene91519:CDS |
| TGTACTCCAGCACAATCATA+TGG | 0.513671 | 7.1:+85146270 | MS.gene91519:CDS |
| ATGGCTCCAAGGAGCAGTTA+CGG | 0.518058 | 7.1:+85145724 | MS.gene91519:CDS |
| AACAATGGTGGCCTGCCATA+TGG | 0.518454 | 7.1:-85146372 | None:intergenic |
| TGTGGATGCTGCCCTTGTGA+AGG | 0.518910 | 7.1:-85146072 | None:intergenic |
| CCAGGCGAGATTCCGTATCA+TGG | 0.519439 | 7.1:+85146336 | MS.gene91519:CDS |
| CCAGGCGAGATTCCGTATCA+TGG | 0.519439 | 7.1:+85146456 | MS.gene91519:CDS |
| TGTGGTTGTTGTGTCAGACC+TGG | 0.519580 | 7.1:-85139573 | None:intergenic |
| CCATGATACGGAATCTCGCC+TGG | 0.519692 | 7.1:-85146246 | None:intergenic |
| CATATTACTATCAGCATCGC+TGG | 0.520981 | 7.1:+85145641 | MS.gene91519:CDS |
| TAACAGACATGATGAAAAGA+AGG | 0.521017 | 7.1:+85139352 | MS.gene91519:CDS |
| AGGCCTCGAGCTACAAGTGC+AGG | 0.522201 | 7.1:-85141656 | None:intergenic |
| GAAGTATCATGCTGAAAGGT+GGG | 0.522280 | 7.1:-85139527 | None:intergenic |
| CGGAATCTCGCCTGGTTGAG+TGG | 0.522392 | 7.1:-85146115 | None:intergenic |
| CGGAATCTCGCCTGGTTGAG+TGG | 0.522392 | 7.1:-85146238 | None:intergenic |
| CGGAATCTCGCCTGGTTGAG+TGG | 0.522392 | 7.1:-85146328 | None:intergenic |
| CGGAATCTCGCCTGGTTGAG+TGG | 0.522392 | 7.1:-85146448 | None:intergenic |
| CGGAATCTCGCCTGGTTGAG+TGG | 0.522392 | 7.1:-85146571 | None:intergenic |
| CACCCTAGAGCCACTCAACC+AGG | 0.523349 | 7.1:+85146105 | MS.gene91519:CDS |
| GATAAGGACCGGTACAGTGT+TGG | 0.525106 | 7.1:-85145882 | None:intergenic |
| GGATGTTGTCCTTGTGAAGG+TGG | 0.528344 | 7.1:-85146192 | None:intergenic |
| GGATGTTGTCCTTGTGAAGG+TGG | 0.528344 | 7.1:-85146402 | None:intergenic |
| GGATGTTGTCCTTGTGAAGG+TGG | 0.528344 | 7.1:-85146525 | None:intergenic |
| CCACCTGATGATGACTTGAC+AGG | 0.529512 | 7.1:-85145529 | None:intergenic |
| GATGTACATACCTTATTGCT+AGG | 0.530908 | 7.1:-85139611 | None:intergenic |
| AGGCCTCACCAGAGTTTGCA+GGG | 0.531736 | 7.1:+85145763 | MS.gene91519:CDS |
| CAATAGCCTGAGCAGGGGAG+AGG | 0.532008 | 7.1:-85141676 | None:intergenic |
| TAGGTTGGATGTCCTCCATA+TGG | 0.532711 | 7.1:-85145976 | None:intergenic |
| GGTGGCCTGCCATATGGTGC+TGG | 0.532857 | 7.1:-85146366 | None:intergenic |
| ACGGTTCTGGTTGGGAGCAA+AGG | 0.533493 | 7.1:+85145743 | MS.gene91519:CDS |
| GACAAAAGCAACCTATATCC+AGG | 0.533532 | 7.1:+85139555 | MS.gene91519:CDS |
| GGATGCTGCCCTTGTGAAGG+TGG | 0.534828 | 7.1:-85146069 | None:intergenic |
| TAATTAATCTGAACAGGGGA+TGG | 0.535256 | 7.1:-85145922 | None:intergenic |
| CCAGGCGAGATTCCGTATCA+TGG | 0.541393 | 7.1:+85146246 | MS.gene91519:CDS |
| TTGAGCCCAGGCTTGAGGGT+AGG | 0.542149 | 7.1:-85145995 | None:intergenic |
| CTACTCCAGCACCATATGGC+AGG | 0.542173 | 7.1:+85146361 | MS.gene91519:CDS |
| AGGAACCTCAATTTCTTGTG+TGG | 0.543235 | 7.1:-85139591 | None:intergenic |
| CCTTCACGAGCCACTCAACC+AGG | 0.543885 | 7.1:+85146318 | MS.gene91519:CDS |
| CTCCATATGGATATTGTGCA+GGG | 0.544808 | 7.1:-85145963 | None:intergenic |
| GGCCTGCCATATGATTGTGC+TGG | 0.545310 | 7.1:-85146153 | None:intergenic |
| GGCCTGCCATATGATTGTGC+TGG | 0.545310 | 7.1:-85146276 | None:intergenic |
| AAGCCGATGATTCTAAAGAA+AGG | 0.546417 | 7.1:+85142527 | MS.gene91519:CDS |
| CTCCAGCACAATCATATGGC+AGG | 0.546666 | 7.1:+85146274 | MS.gene91519:CDS |
| CTCCAGCACAATCATATGGC+AGG | 0.547509 | 7.1:+85146151 | MS.gene91519:CDS |
| AGATCCTTGTGGCGGACGGT+AGG | 0.547916 | 7.1:-85145566 | None:intergenic |
| AGAATCTCTTTGGTATTGGT+AGG | 0.550145 | 7.1:-85139452 | None:intergenic |
| TGCATATGATTGATTATGAG+AGG | 0.551522 | 7.1:-85145671 | None:intergenic |
| AACAACCACACAAGAAATTG+AGG | 0.552466 | 7.1:+85139586 | MS.gene91519:CDS |
| GGCTTTCCATACTGCTGTGG+AGG | 0.552499 | 7.1:-85146030 | None:intergenic |
| TAAGGACCGGTACAGTGTTG+GGG | 0.552946 | 7.1:-85145880 | None:intergenic |
| TTCACAAGGGCAGCATCCAC+AGG | 0.553792 | 7.1:+85146074 | MS.gene91519:CDS |
| CCTGGTTGAGTGGCTCGTGA+AGG | 0.555763 | 7.1:-85146318 | None:intergenic |
| GTATCTAACCTCTGTGAACA+TGG | 0.556597 | 7.1:-85141039 | None:intergenic |
| AGAAGTATCATGCTGAAAGG+TGG | 0.557514 | 7.1:-85139528 | None:intergenic |
| GGAGCAGTTACGGTTCTGGT+TGG | 0.559653 | 7.1:+85145734 | MS.gene91519:CDS |
| CAGGCCTACCGTCCGCCACA+AGG | 0.560264 | 7.1:+85145562 | MS.gene91519:CDS |
| TCTGGATGTTGTCCTTGTGA+AGG | 0.560326 | 7.1:-85146528 | None:intergenic |
| TCCAACCTACCCTCAAGCCT+GGG | 0.561080 | 7.1:+85145990 | MS.gene91519:CDS |
| CCTGGTTGAGTGGCTCTAGG+GGG | 0.564374 | 7.1:-85146228 | None:intergenic |
| CCTGGTTGAGTGGCTCTAGG+GGG | 0.564374 | 7.1:-85146438 | None:intergenic |
| CCTGGTTGAGTGGCTCTAGG+GGG | 0.564374 | 7.1:-85146561 | None:intergenic |
| GGCCTGAGATATGATTGTGC+TGG | 0.566446 | 7.1:-85146486 | None:intergenic |
| CTCCAGCACAATCACATGGC+AGG | 0.569765 | 7.1:+85146607 | MS.gene91519:CDS |
| GGATGTTGTCCTTGTGAAGG+TGG | 0.573281 | 7.1:-85146648 | None:intergenic |
| CTCCTTGGAGCCATATGTTG+AGG | 0.573692 | 7.1:-85145715 | None:intergenic |
| AAAGGTGGGATCATTCGAGC+TGG | 0.574288 | 7.1:-85139513 | None:intergenic |
| GGACAACATCCAGAGTCCTA+TGG | 0.576552 | 7.1:+85146537 | MS.gene91519:CDS |
| GGTTGAGTGGCTCGTGAAGG+TGG | 0.577723 | 7.1:-85146315 | None:intergenic |
| GAGGCAAATTGAAATTGCAC+AGG | 0.580541 | 7.1:+85142573 | MS.gene91519:CDS |
| GGCCCCTGCAAACTCTGGTG+AGG | 0.583174 | 7.1:-85145766 | None:intergenic |
| ATGATCATTATGGTGGACAA+AGG | 0.586741 | 7.1:+85145809 | MS.gene91519:CDS |
| GGATAATTTCCATAAGGAGT+AGG | 0.588588 | 7.1:-85145694 | None:intergenic |
| TCTGGATGTTGTCCTTGTGA+AGG | 0.589660 | 7.1:-85146195 | None:intergenic |
| TCTGGATGTTGTCCTTGTGA+AGG | 0.589660 | 7.1:-85146405 | None:intergenic |
| GATGGACTTATGGAGGGTAA+AGG | 0.592593 | 7.1:-85145904 | None:intergenic |
| CACCAGATCCTTGTGGCGGA+CGG | 0.592623 | 7.1:-85145570 | None:intergenic |
| ATCCCACAATAGCCTGAGCA+GGG | 0.592936 | 7.1:-85141682 | None:intergenic |
| AACAGGGGATGGACTTATGG+AGG | 0.593055 | 7.1:-85145911 | None:intergenic |
| CTGGTTGAGTGGCTCTAGGG+GGG | 0.596393 | 7.1:-85146227 | None:intergenic |
| CTGGTTGAGTGGCTCTAGGG+GGG | 0.596393 | 7.1:-85146437 | None:intergenic |
| CTGGTTGAGTGGCTCTAGGG+GGG | 0.596393 | 7.1:-85146560 | None:intergenic |
| GAACTTGCGCTTACAATCAG+AGG | 0.601991 | 7.1:-85138767 | None:intergenic |
| ATCCTCAACATATGGCTCCA+AGG | 0.603445 | 7.1:+85145713 | MS.gene91519:CDS |
| GGTGGCTTTCCATACTGCTG+TGG | 0.604041 | 7.1:-85146033 | None:intergenic |
| TACCAAAGAGATTCTCGTTG+AGG | 0.605338 | 7.1:+85139460 | MS.gene91519:CDS |
| AGTCAAACAAACCTGACTCA+AGG | 0.609370 | 7.1:-85142611 | None:intergenic |
| CCAGGCGAGATTCCGTATCA+GGG | 0.609811 | 7.1:+85146123 | MS.gene91519:CDS |
| CCAGGCGAGATTCCGTATCA+GGG | 0.609811 | 7.1:+85146579 | MS.gene91519:CDS |
| TTTGGCATGCCACCTTCACA+AGG | 0.611493 | 7.1:+85146183 | MS.gene91519:CDS |
| TTTGGCATGCCACCTTCACA+AGG | 0.611493 | 7.1:+85146393 | MS.gene91519:CDS |
| TTTGGCATGCCACCTTCACA+AGG | 0.611493 | 7.1:+85146516 | MS.gene91519:CDS |
| CCACCACTATGGGGTCAGCA+AGG | 0.612728 | 7.1:+85145595 | MS.gene91519:CDS |
| TATGGCGTGCCACCTTCACA+AGG | 0.616928 | 7.1:+85146060 | MS.gene91519:CDS |
| CGATGCTGATAGTAATATGA+TGG | 0.617010 | 7.1:-85145637 | None:intergenic |
| TCGGCTTCGGGAAGATGTTG+AGG | 0.617094 | 7.1:-85142511 | None:intergenic |
| TAACCCCTGTTGTGTGAGGG+CGG | 0.617324 | 7.1:-85145787 | None:intergenic |
| CTGGTTGAGTGGCTCTAGGG+TGG | 0.617348 | 7.1:-85146104 | None:intergenic |
| AAGGACCGGTACAGTGTTGG+GGG | 0.617380 | 7.1:-85145879 | None:intergenic |
| AGAAGAAGTATCATGCTGAA+AGG | 0.621992 | 7.1:-85139531 | None:intergenic |
| GGGGCCGCCCTCACACAACA+GGG | 0.626489 | 7.1:+85145783 | MS.gene91519:CDS |
| GGAGGGTAAAGGATAAGGAC+CGG | 0.627635 | 7.1:-85145893 | None:intergenic |
| AGGGGTTATGATCATTATGG+TGG | 0.627740 | 7.1:+85145802 | MS.gene91519:CDS |
| TGCTGATAGTAATATGATGG+TGG | 0.628397 | 7.1:-85145634 | None:intergenic |
| GAAGATCAACACTCTGATGA+CGG | 0.628431 | 7.1:+85138790 | MS.gene91519:CDS |
| ACGTGAAGTTCCAAATGAGA+AGG | 0.630318 | 7.1:+85141157 | MS.gene91519:CDS |
| GCTGGAGTAGAACCCTGATA+CGG | 0.630359 | 7.1:-85146135 | None:intergenic |
| GCTGGAGTAGAACCCTGATA+CGG | 0.630359 | 7.1:-85146591 | None:intergenic |
| AATTGTAATTAATCTGAACA+GGG | 0.630538 | 7.1:-85145927 | None:intergenic |
| CCATATGGATATTGTGCAGG+GGG | 0.630768 | 7.1:-85145961 | None:intergenic |
| GATGATAACCAGAATTACCT+AGG | 0.632946 | 7.1:+85138838 | MS.gene91519:CDS |
| AACTTGCGCTTACAATCAGA+GGG | 0.633621 | 7.1:-85138766 | None:intergenic |
| GCTGGAGTAGAACCATGATA+CGG | 0.633938 | 7.1:-85146348 | None:intergenic |
| AAAGAAGGTTGCTGAGCCAG+AGG | 0.634204 | 7.1:+85139367 | MS.gene91519:CDS |
| GCATATGATTGATTATGAGA+GGG | 0.634444 | 7.1:-85145670 | None:intergenic |
| CTGGTTGAGTGGCTCTAGGG+TGG | 0.634984 | 7.1:-85146684 | None:intergenic |
| GAACCTTGCTGACCCCATAG+TGG | 0.636422 | 7.1:-85145598 | None:intergenic |
| CGTCCGCCACAAGGATCTGG+TGG | 0.637608 | 7.1:+85145571 | MS.gene91519:CDS |
| GCTGGAGTACAACCATGATA+CGG | 0.638390 | 7.1:-85146258 | None:intergenic |
| ATTCCACAGGCTGATGCTGG+AGG | 0.639608 | 7.1:+85141629 | MS.gene91519:intron |
| GATCATTATGGTGGACAAAG+GGG | 0.641676 | 7.1:+85145811 | MS.gene91519:CDS |
| GGTGGCACGCCATACAATGG+TGG | 0.642515 | 7.1:-85146630 | None:intergenic |
| TCTCCTGCACTTGTAGCTCG+AGG | 0.645902 | 7.1:+85141653 | MS.gene91519:CDS |
| ATCATAACCCCTGTTGTGTG+AGG | 0.648263 | 7.1:-85145791 | None:intergenic |
| GCTGGAGTAGAACCATGATA+CGG | 0.649951 | 7.1:-85146468 | None:intergenic |
| GGACCACCAGATCCTTGTGG+CGG | 0.656693 | 7.1:-85145574 | None:intergenic |
| TGGTTATCATCGTCAAGACA+AGG | 0.656873 | 7.1:-85138826 | None:intergenic |
| GGTGGCACGCCATACAATGG+TGG | 0.659754 | 7.1:-85146051 | None:intergenic |
| TATGGCGTGCCACCTTCACA+AGG | 0.660463 | 7.1:+85146639 | MS.gene91519:CDS |
| CTAGGGTGGACATAAGCCTG+TGG | 0.661544 | 7.1:-85146090 | None:intergenic |
| GACAACATCCAGTCTTATGG+CGG | 0.662824 | 7.1:+85146661 | MS.gene91519:CDS |
| AATTGCACAGGAAATGACAA+AGG | 0.663160 | 7.1:+85142585 | MS.gene91519:CDS |
| TCCCACAATAGCCTGAGCAG+GGG | 0.667257 | 7.1:-85141681 | None:intergenic |
| GGCCTCACCAGAGTTTGCAG+GGG | 0.668815 | 7.1:+85145764 | MS.gene91519:CDS |
| TCATAACCCCTGTTGTGTGA+GGG | 0.668905 | 7.1:-85145790 | None:intergenic |
| TCCATATGGATATTGTGCAG+GGG | 0.669519 | 7.1:-85145962 | None:intergenic |
| AGAGGAAAATGCTCATTCGG+AGG | 0.674893 | 7.1:+85139385 | MS.gene91519:CDS |
| ACTGGATGTTGTCCTTGTGA+AGG | 0.675212 | 7.1:-85146651 | None:intergenic |
| CCTGCACAATATCCATATGG+AGG | 0.675215 | 7.1:+85145964 | MS.gene91519:CDS |
| GCTGATAGTAATATGATGGT+GGG | 0.679017 | 7.1:-85145633 | None:intergenic |
| ATTGTAATTAATCTGAACAG+GGG | 0.679692 | 7.1:-85145926 | None:intergenic |
| TCTACTCCAGCACAATCACA+TGG | 0.682255 | 7.1:+85146603 | MS.gene91519:CDS |
| CCTTGCTGACCCCATAGTGG+TGG | 0.683281 | 7.1:-85145595 | None:intergenic |
| ATTGGATGCCATGAGTGCAG+AGG | 0.684700 | 7.1:+85141406 | MS.gene91519:CDS |
| CCTGTCAAGTCATCATCAGG+TGG | 0.685141 | 7.1:+85145529 | MS.gene91519:CDS |
| GGGCCGCCCTCACACAACAG+GGG | 0.685494 | 7.1:+85145784 | MS.gene91519:CDS |
| GAAGGTGGCACGCCATACAA+TGG | 0.687612 | 7.1:-85146054 | None:intergenic |
| GAAGGTGGCACGCCATACAA+TGG | 0.687612 | 7.1:-85146633 | None:intergenic |
| GGTGGACCACCAGATCCTTG+TGG | 0.688140 | 7.1:-85145577 | None:intergenic |
| TCTGGTGGTCCACCACTATG+GGG | 0.696904 | 7.1:+85145586 | MS.gene91519:CDS |
| GAAGGTGGCATGCCAAACAA+TGG | 0.699502 | 7.1:-85146300 | None:intergenic |
| GGTGGCATGCCAAACAATGG+TGG | 0.699630 | 7.1:-85146174 | None:intergenic |
| GGTGGCATGCCAAACAATGG+TGG | 0.699630 | 7.1:-85146297 | None:intergenic |
| GGTGGCATGCCAAACAATGG+TGG | 0.699630 | 7.1:-85146384 | None:intergenic |
| GGTGGCATGCCAAACAATGG+TGG | 0.699630 | 7.1:-85146507 | None:intergenic |
| ACAGGGGATGGACTTATGGA+GGG | 0.703309 | 7.1:-85145910 | None:intergenic |
| GAAGGTGGCATGCCAAACAA+TGG | 0.715515 | 7.1:-85146177 | None:intergenic |
| GAAGGTGGCATGCCAAACAA+TGG | 0.715515 | 7.1:-85146387 | None:intergenic |
| GAAGGTGGCATGCCAAACAA+TGG | 0.715515 | 7.1:-85146510 | None:intergenic |
| GATAGTAATATGATGGTGGG+TGG | 0.723828 | 7.1:-85145630 | None:intergenic |
| ATGGCGTGCCACCTTCACAA+GGG | 0.726964 | 7.1:+85146061 | MS.gene91519:CDS |
| AATGGATGCCATGTTCACAG+AGG | 0.777271 | 7.1:+85141031 | MS.gene91519:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 85138727 | 85146692 | 85138727 | ID=MS.gene91519 |
| chr7.1 | mRNA | 85138727 | 85146692 | 85138727 | ID=MS.gene91519.t1;Parent=MS.gene91519 |
| chr7.1 | exon | 85138727 | 85138859 | 85138727 | ID=MS.gene91519.t1.exon1;Parent=MS.gene91519.t1 |
| chr7.1 | CDS | 85138727 | 85138859 | 85138727 | ID=cds.MS.gene91519.t1;Parent=MS.gene91519.t1 |
| chr7.1 | exon | 85139345 | 85139622 | 85139345 | ID=MS.gene91519.t1.exon2;Parent=MS.gene91519.t1 |
| chr7.1 | CDS | 85139345 | 85139622 | 85139345 | ID=cds.MS.gene91519.t1;Parent=MS.gene91519.t1 |
| chr7.1 | exon | 85140981 | 85141052 | 85140981 | ID=MS.gene91519.t1.exon3;Parent=MS.gene91519.t1 |
| chr7.1 | CDS | 85140981 | 85141052 | 85140981 | ID=cds.MS.gene91519.t1;Parent=MS.gene91519.t1 |
| chr7.1 | exon | 85141134 | 85141178 | 85141134 | ID=MS.gene91519.t1.exon4;Parent=MS.gene91519.t1 |
| chr7.1 | CDS | 85141134 | 85141178 | 85141134 | ID=cds.MS.gene91519.t1;Parent=MS.gene91519.t1 |
| chr7.1 | exon | 85141356 | 85141427 | 85141356 | ID=MS.gene91519.t1.exon5;Parent=MS.gene91519.t1 |
| chr7.1 | CDS | 85141356 | 85141427 | 85141356 | ID=cds.MS.gene91519.t1;Parent=MS.gene91519.t1 |
| chr7.1 | exon | 85141638 | 85141739 | 85141638 | ID=MS.gene91519.t1.exon6;Parent=MS.gene91519.t1 |
| chr7.1 | CDS | 85141638 | 85141739 | 85141638 | ID=cds.MS.gene91519.t1;Parent=MS.gene91519.t1 |
| chr7.1 | exon | 85142505 | 85142621 | 85142505 | ID=MS.gene91519.t1.exon7;Parent=MS.gene91519.t1 |
| chr7.1 | CDS | 85142505 | 85142621 | 85142505 | ID=cds.MS.gene91519.t1;Parent=MS.gene91519.t1 |
| chr7.1 | exon | 85145529 | 85146692 | 85145529 | ID=MS.gene91519.t1.exon8;Parent=MS.gene91519.t1 |
| chr7.1 | CDS | 85145529 | 85146692 | 85145529 | ID=cds.MS.gene91519.t1;Parent=MS.gene91519.t1 |
| Gene Sequence |
| Protein sequence |
