Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91551.t1 | RHN80717.1 | 93.3 | 511 | 34 | 0 | 1 | 511 | 1 | 511 | 3.20E-272 | 947.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91551.t1 | O13633 | 28.8 | 208 | 98 | 4 | 1 | 159 | 1 | 207 | 2.4e-10 | 68.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91551.t1 | A0A396K2H3 | 93.3 | 511 | 34 | 0 | 1 | 511 | 1 | 511 | 2.3e-272 | 947.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene91551 | 0.828491 | 8.73E-55 | -1.69E-46 |
| MS.gene050297 | MS.gene91551 | 0.808834 | 2.55E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene91551 | 0.810397 | 1.18E-50 | -1.69E-46 |
| MS.gene051914 | MS.gene91551 | 0.812527 | 4.05E-51 | -1.69E-46 |
| MS.gene051955 | MS.gene91551 | 0.860873 | 1.52E-63 | -1.69E-46 |
| MS.gene052308 | MS.gene91551 | 0.859869 | 3.07E-63 | -1.69E-46 |
| MS.gene052367 | MS.gene91551 | 0.86182 | 7.84E-64 | -1.69E-46 |
| MS.gene053173 | MS.gene91551 | 0.841357 | 4.99E-58 | -1.69E-46 |
| MS.gene053348 | MS.gene91551 | 0.815381 | 9.52E-52 | -1.69E-46 |
| MS.gene053416 | MS.gene91551 | 0.839194 | 1.83E-57 | -1.69E-46 |
| MS.gene053417 | MS.gene91551 | 0.83806 | 3.60E-57 | -1.69E-46 |
| MS.gene054551 | MS.gene91551 | 0.848605 | 5.51E-60 | -1.69E-46 |
| MS.gene054552 | MS.gene91551 | 0.848688 | 5.22E-60 | -1.69E-46 |
| MS.gene054593 | MS.gene91551 | 0.847757 | 9.45E-60 | -1.69E-46 |
| MS.gene054662 | MS.gene91551 | 0.803706 | 3.07E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene91551 | 0.800329 | 1.52E-48 | -1.69E-46 |
| MS.gene055308 | MS.gene91551 | 0.858367 | 8.65E-63 | -1.69E-46 |
| MS.gene055578 | MS.gene91551 | 0.869789 | 2.38E-66 | -1.69E-46 |
| MS.gene055957 | MS.gene91551 | 0.864381 | 1.27E-64 | -1.69E-46 |
| MS.gene056041 | MS.gene91551 | 0.880951 | 3.59E-70 | -1.69E-46 |
| MS.gene056042 | MS.gene91551 | 0.807444 | 5.04E-50 | -1.69E-46 |
| MS.gene05640 | MS.gene91551 | 0.852804 | 3.63E-61 | -1.69E-46 |
| MS.gene056526 | MS.gene91551 | 0.813576 | 2.39E-51 | -1.69E-46 |
| MS.gene05652 | MS.gene91551 | 0.807105 | 5.95E-50 | -1.69E-46 |
| MS.gene057458 | MS.gene91551 | 0.871572 | 6.17E-67 | -1.69E-46 |
| MS.gene058013 | MS.gene91551 | 0.806273 | 8.91E-50 | -1.69E-46 |
| MS.gene058128 | MS.gene91551 | 0.825399 | 4.79E-54 | -1.69E-46 |
| MS.gene058818 | MS.gene91551 | 0.80019 | 1.62E-48 | -1.69E-46 |
| MS.gene058853 | MS.gene91551 | 0.851464 | 8.73E-61 | -1.69E-46 |
| MS.gene059553 | MS.gene91551 | 0.820097 | 8.21E-53 | -1.69E-46 |
| MS.gene060473 | MS.gene91551 | 0.861003 | 1.39E-63 | -1.69E-46 |
| MS.gene060565 | MS.gene91551 | 0.849245 | 3.66E-60 | -1.69E-46 |
| MS.gene06057 | MS.gene91551 | 0.80024 | 1.58E-48 | -1.69E-46 |
| MS.gene06093 | MS.gene91551 | 0.857802 | 1.27E-62 | -1.69E-46 |
| MS.gene061099 | MS.gene91551 | 0.859741 | 3.35E-63 | -1.69E-46 |
| MS.gene061260 | MS.gene91551 | 0.883628 | 3.82E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91551.t1 | MTR_1g081970 | 97.065 | 511 | 15 | 0 | 1 | 511 | 1 | 511 | 0.0 | 1028 |
| MS.gene91551.t1 | MTR_1g060440 | 68.727 | 534 | 121 | 6 | 1 | 512 | 1 | 510 | 0.0 | 709 |
| MS.gene91551.t1 | MTR_7g114150 | 43.672 | 561 | 250 | 9 | 1 | 510 | 1 | 546 | 6.16e-133 | 412 |
| MS.gene91551.t1 | MTR_1g081960 | 66.016 | 256 | 71 | 4 | 1 | 252 | 51 | 294 | 1.94e-104 | 315 |
| MS.gene91551.t1 | MTR_2g020420 | 37.567 | 559 | 277 | 19 | 1 | 511 | 1 | 535 | 3.41e-89 | 293 |
| MS.gene91551.t1 | MTR_4g118660 | 35.179 | 560 | 273 | 12 | 1 | 510 | 42 | 561 | 4.25e-89 | 294 |
| MS.gene91551.t1 | MTR_4g118660 | 33.898 | 118 | 70 | 3 | 397 | 506 | 739 | 856 | 9.85e-12 | 68.2 |
| MS.gene91551.t1 | MTR_1g051765 | 55.102 | 245 | 58 | 2 | 267 | 511 | 40 | 232 | 2.32e-82 | 261 |
| MS.gene91551.t1 | MTR_8g011080 | 32.567 | 522 | 250 | 14 | 1 | 510 | 54 | 485 | 4.13e-63 | 219 |
| MS.gene91551.t1 | MTR_6g059870 | 29.696 | 559 | 324 | 18 | 1 | 506 | 1 | 543 | 2.03e-58 | 207 |
| MS.gene91551.t1 | MTR_2g020420 | 44.681 | 235 | 118 | 4 | 1 | 224 | 1 | 234 | 4.13e-55 | 199 |
| MS.gene91551.t1 | MTR_3g091040 | 42.609 | 230 | 121 | 6 | 1 | 222 | 1 | 227 | 5.99e-49 | 180 |
| MS.gene91551.t1 | MTR_3g091040 | 37.600 | 125 | 72 | 3 | 383 | 501 | 422 | 546 | 2.88e-18 | 89.0 |
| MS.gene91551.t1 | MTR_5g097170 | 36.239 | 218 | 110 | 6 | 1 | 218 | 1 | 189 | 1.89e-30 | 126 |
| MS.gene91551.t1 | MTR_5g097170 | 39.785 | 93 | 53 | 2 | 416 | 505 | 450 | 542 | 2.71e-17 | 85.5 |
| MS.gene91551.t1 | MTR_1g082220 | 84.848 | 66 | 10 | 0 | 1 | 66 | 1 | 66 | 5.50e-30 | 116 |
| MS.gene91551.t1 | MTR_1g082220 | 69.492 | 59 | 18 | 0 | 257 | 315 | 90 | 148 | 8.49e-20 | 87.8 |
| MS.gene91551.t1 | MTR_3g099170 | 24.045 | 628 | 344 | 19 | 1 | 503 | 15 | 634 | 2.54e-29 | 123 |
| MS.gene91551.t1 | MTR_3g082810 | 32.895 | 228 | 120 | 5 | 1 | 226 | 1 | 197 | 2.42e-28 | 119 |
| MS.gene91551.t1 | MTR_3g082810 | 36.220 | 127 | 74 | 4 | 386 | 505 | 407 | 533 | 2.37e-19 | 92.0 |
| MS.gene91551.t1 | MTR_1g051815 | 69.014 | 71 | 21 | 1 | 317 | 387 | 23 | 92 | 2.42e-21 | 89.0 |
| MS.gene91551.t1 | MTR_3g100330 | 29.520 | 271 | 134 | 9 | 1 | 260 | 1 | 225 | 2.83e-20 | 90.1 |
| MS.gene91551.t1 | MTR_5g066100 | 29.032 | 217 | 147 | 4 | 1 | 214 | 2 | 214 | 1.36e-18 | 87.8 |
| MS.gene91551.t1 | MTR_2g436560 | 32.530 | 166 | 73 | 2 | 1 | 128 | 1 | 165 | 5.24e-14 | 73.9 |
| MS.gene91551.t1 | MTR_2g435450 | 42.697 | 89 | 45 | 2 | 47 | 129 | 13 | 101 | 3.51e-13 | 70.5 |
| MS.gene91551.t1 | MTR_4g120450 | 49.231 | 65 | 33 | 0 | 66 | 130 | 36 | 100 | 3.49e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91551.t1 | AT5G18750 | 35.496 | 524 | 274 | 15 | 4 | 506 | 3 | 483 | 4.13e-68 | 235 |
| MS.gene91551.t1 | AT5G18750 | 32.039 | 103 | 64 | 2 | 409 | 509 | 649 | 747 | 2.88e-12 | 70.1 |
| MS.gene91551.t1 | AT3G04980 | 31.579 | 608 | 285 | 18 | 1 | 510 | 1 | 575 | 3.34e-66 | 232 |
| MS.gene91551.t1 | AT3G04980 | 31.579 | 608 | 285 | 18 | 1 | 510 | 1 | 575 | 3.34e-66 | 232 |
| MS.gene91551.t1 | AT3G04980 | 30.678 | 590 | 278 | 18 | 19 | 510 | 1 | 557 | 1.18e-57 | 207 |
| MS.gene91551.t1 | AT5G27240 | 31.346 | 587 | 294 | 20 | 1 | 510 | 1 | 555 | 1.50e-57 | 207 |
| MS.gene91551.t1 | AT5G27240 | 31.346 | 587 | 294 | 20 | 1 | 510 | 1 | 555 | 1.50e-57 | 207 |
| MS.gene91551.t1 | AT5G27240 | 31.346 | 587 | 294 | 20 | 1 | 510 | 1 | 555 | 1.50e-57 | 207 |
| MS.gene91551.t1 | AT3G06340 | 40.984 | 244 | 117 | 4 | 1 | 226 | 1 | 235 | 1.04e-48 | 179 |
| MS.gene91551.t1 | AT3G06340 | 40.984 | 244 | 117 | 4 | 1 | 226 | 1 | 235 | 1.04e-48 | 179 |
| MS.gene91551.t1 | AT3G06340 | 40.984 | 244 | 117 | 4 | 1 | 226 | 1 | 235 | 1.04e-48 | 179 |
| MS.gene91551.t1 | AT3G06340 | 40.984 | 244 | 117 | 4 | 1 | 226 | 1 | 235 | 1.04e-48 | 179 |
| MS.gene91551.t1 | AT5G53150 | 36.290 | 248 | 130 | 5 | 1 | 224 | 1 | 244 | 6.57e-44 | 163 |
| MS.gene91551.t1 | AT5G53150 | 36.290 | 248 | 130 | 5 | 1 | 224 | 1 | 244 | 4.36e-43 | 163 |
| MS.gene91551.t1 | AT5G53150 | 37.879 | 132 | 73 | 4 | 380 | 508 | 413 | 538 | 8.02e-18 | 87.4 |
| MS.gene91551.t1 | AT5G53150 | 36.290 | 248 | 130 | 5 | 1 | 224 | 1 | 244 | 4.36e-43 | 163 |
| MS.gene91551.t1 | AT5G53150 | 37.879 | 132 | 73 | 4 | 380 | 508 | 413 | 538 | 8.02e-18 | 87.4 |
| MS.gene91551.t1 | AT5G53150 | 36.290 | 248 | 130 | 5 | 1 | 224 | 1 | 244 | 4.41e-43 | 164 |
| MS.gene91551.t1 | AT5G53150 | 37.879 | 132 | 73 | 4 | 380 | 508 | 442 | 567 | 6.93e-18 | 87.8 |
| MS.gene91551.t1 | AT5G53150 | 36.290 | 248 | 130 | 5 | 1 | 224 | 1 | 244 | 4.41e-43 | 164 |
| MS.gene91551.t1 | AT5G53150 | 37.879 | 132 | 73 | 4 | 380 | 508 | 442 | 567 | 6.93e-18 | 87.8 |
| MS.gene91551.t1 | AT5G53150 | 36.290 | 248 | 130 | 5 | 1 | 224 | 1 | 244 | 4.41e-43 | 164 |
| MS.gene91551.t1 | AT5G53150 | 37.879 | 132 | 73 | 4 | 380 | 508 | 442 | 567 | 6.93e-18 | 87.8 |
| MS.gene91551.t1 | AT2G25560 | 35.593 | 236 | 135 | 3 | 1 | 222 | 1 | 233 | 3.90e-41 | 157 |
| MS.gene91551.t1 | AT2G25560 | 36.364 | 88 | 49 | 3 | 420 | 502 | 423 | 508 | 1.27e-11 | 67.8 |
| MS.gene91551.t1 | AT5G37380 | 33.094 | 278 | 127 | 4 | 1 | 220 | 1 | 277 | 1.04e-38 | 147 |
| MS.gene91551.t1 | AT5G37380 | 33.094 | 278 | 127 | 4 | 1 | 220 | 1 | 277 | 1.04e-38 | 147 |
| MS.gene91551.t1 | AT5G37380 | 33.094 | 278 | 127 | 4 | 1 | 220 | 1 | 277 | 1.04e-38 | 147 |
| MS.gene91551.t1 | AT5G37380 | 33.094 | 278 | 127 | 4 | 1 | 220 | 1 | 277 | 1.04e-38 | 147 |
| MS.gene91551.t1 | AT5G37380 | 33.094 | 278 | 127 | 4 | 1 | 220 | 1 | 277 | 1.04e-38 | 147 |
| MS.gene91551.t1 | AT5G37380 | 33.094 | 278 | 127 | 4 | 1 | 220 | 1 | 277 | 1.04e-38 | 147 |
| MS.gene91551.t1 | AT5G37380 | 33.094 | 278 | 127 | 4 | 1 | 220 | 1 | 277 | 1.04e-38 | 147 |
| MS.gene91551.t1 | AT5G37380 | 33.094 | 278 | 127 | 4 | 1 | 220 | 1 | 277 | 1.04e-38 | 147 |
| MS.gene91551.t1 | AT5G37380 | 33.094 | 278 | 127 | 4 | 1 | 220 | 1 | 277 | 1.04e-38 | 147 |
| MS.gene91551.t1 | AT2G05230 | 32.937 | 252 | 156 | 5 | 1 | 251 | 1 | 240 | 3.50e-35 | 140 |
| MS.gene91551.t1 | AT2G05230 | 35.714 | 112 | 55 | 3 | 421 | 515 | 473 | 584 | 5.76e-15 | 78.2 |
| MS.gene91551.t1 | AT2G05250 | 32.937 | 252 | 156 | 5 | 1 | 251 | 1 | 240 | 3.50e-35 | 140 |
| MS.gene91551.t1 | AT2G05250 | 35.714 | 112 | 55 | 3 | 421 | 515 | 473 | 584 | 5.76e-15 | 78.2 |
| MS.gene91551.t1 | AT4G19570 | 34.118 | 255 | 127 | 6 | 1 | 220 | 1 | 249 | 3.22e-33 | 133 |
| MS.gene91551.t1 | AT4G19590 | 46.212 | 132 | 71 | 0 | 1 | 132 | 1 | 132 | 1.18e-31 | 125 |
| MS.gene91551.t1 | AT5G37750 | 37.799 | 209 | 92 | 6 | 10 | 217 | 22 | 193 | 1.46e-31 | 122 |
| MS.gene91551.t1 | AT4G19590 | 45.522 | 134 | 73 | 0 | 1 | 134 | 1 | 134 | 1.68e-31 | 125 |
| MS.gene91551.t1 | AT4G19580 | 34.322 | 236 | 111 | 8 | 1 | 193 | 1 | 235 | 8.94e-29 | 116 |
| MS.gene91551.t1 | AT5G37440 | 36.239 | 218 | 102 | 6 | 1 | 217 | 16 | 197 | 1.45e-28 | 115 |
| MS.gene91551.t1 | AT4G19590 | 45.378 | 119 | 65 | 0 | 14 | 132 | 3 | 121 | 9.11e-26 | 108 |
| MS.gene91551.t1 | AT2G35540 | 31.100 | 209 | 111 | 3 | 7 | 215 | 12 | 187 | 1.30e-22 | 102 |
| MS.gene91551.t1 | AT5G18740 | 47.059 | 85 | 44 | 1 | 428 | 511 | 174 | 258 | 4.19e-19 | 90.1 |
| MS.gene91551.t1 | AT5G18730 | 45.055 | 91 | 48 | 2 | 423 | 511 | 39 | 129 | 3.58e-18 | 87.8 |
| MS.gene91551.t1 | AT2G01710 | 28.384 | 229 | 130 | 6 | 4 | 226 | 7 | 207 | 1.06e-16 | 81.6 |
| MS.gene91551.t1 | AT5G35753 | 35.714 | 112 | 55 | 3 | 421 | 515 | 196 | 307 | 3.25e-16 | 81.3 |
| MS.gene91551.t1 | AT2G01710 | 28.384 | 229 | 130 | 6 | 4 | 226 | 51 | 251 | 3.29e-16 | 80.5 |
| MS.gene91551.t1 | AT5G64360 | 28.962 | 183 | 112 | 6 | 47 | 220 | 58 | 231 | 3.64e-16 | 81.3 |
| MS.gene91551.t1 | AT5G64360 | 28.962 | 183 | 112 | 6 | 47 | 220 | 58 | 231 | 3.64e-16 | 81.3 |
| MS.gene91551.t1 | AT5G64360 | 28.962 | 183 | 112 | 6 | 47 | 220 | 58 | 231 | 3.64e-16 | 81.3 |
| MS.gene91551.t1 | AT5G64360 | 28.962 | 183 | 112 | 6 | 47 | 220 | 58 | 231 | 3.64e-16 | 81.3 |
| MS.gene91551.t1 | AT5G64360 | 28.962 | 183 | 112 | 6 | 47 | 220 | 58 | 231 | 3.64e-16 | 81.3 |
| MS.gene91551.t1 | AT5G64360 | 28.962 | 183 | 112 | 6 | 47 | 220 | 58 | 231 | 3.64e-16 | 81.3 |
| MS.gene91551.t1 | AT5G64360 | 28.962 | 183 | 112 | 6 | 47 | 220 | 58 | 231 | 3.74e-16 | 81.3 |
| MS.gene91551.t1 | AT5G09540 | 25.909 | 220 | 138 | 4 | 2 | 218 | 8 | 205 | 1.84e-13 | 71.2 |
| MS.gene91551.t1 | AT3G04960 | 40.449 | 89 | 40 | 4 | 423 | 509 | 325 | 402 | 3.01e-13 | 72.8 |
| MS.gene91551.t1 | AT3G04960 | 40.449 | 89 | 40 | 4 | 423 | 509 | 276 | 353 | 3.05e-13 | 72.4 |
| MS.gene91551.t1 | AT3G04960 | 40.449 | 89 | 40 | 4 | 423 | 509 | 377 | 454 | 4.29e-13 | 72.4 |
| MS.gene91551.t1 | AT3G04960 | 40.449 | 89 | 40 | 4 | 423 | 509 | 328 | 405 | 5.04e-13 | 72.0 |
| MS.gene91551.t1 | AT3G06778 | 35.577 | 104 | 63 | 2 | 44 | 143 | 15 | 118 | 2.37e-12 | 67.0 |
| MS.gene91551.t1 | AT4G39960 | 45.349 | 86 | 47 | 0 | 63 | 148 | 81 | 166 | 1.63e-11 | 67.0 |
| MS.gene91551.t1 | AT4G39960 | 45.349 | 86 | 47 | 0 | 63 | 148 | 81 | 166 | 1.63e-11 | 67.0 |
| MS.gene91551.t1 | AT5G37760 | 31.788 | 151 | 73 | 2 | 13 | 163 | 79 | 199 | 3.09e-11 | 63.5 |
Find 111 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCTGTTGACTTTGGTTC+TGG | 0.183753 | 1.2:+60676793 | None:intergenic |
| GCCTGCGTTGGAACCTTTAT+CGG | 0.260641 | 1.2:+60677033 | None:intergenic |
| TTCTCAAAATTATTGAAATC+TGG | 0.288044 | 1.2:+60676457 | None:intergenic |
| ACCTCATCCCATCCCTCTAA+TGG | 0.305579 | 1.2:-60677309 | MS.gene91551:CDS |
| ATATATGTAGAACTGGAATT+TGG | 0.311647 | 1.2:+60677155 | None:intergenic |
| AAAGCAACACGTTTCATATA+AGG | 0.319773 | 1.2:-60676674 | MS.gene91551:CDS |
| CTACATATATGTTATAAATA+AGG | 0.331085 | 1.2:-60677142 | MS.gene91551:CDS |
| TGAACCTCGCCATCTTCATC+TGG | 0.334839 | 1.2:+60676295 | None:intergenic |
| CTTTCAAGCTGCAGATTACT+TGG | 0.337948 | 1.2:-60676330 | MS.gene91551:CDS |
| AACCTGCACAGCCGACATTC+TGG | 0.340367 | 1.2:-60677200 | MS.gene91551:CDS |
| TTCCCATCATTTGTACAGTT+TGG | 0.341473 | 1.2:-60677060 | MS.gene91551:CDS |
| AACATCAGCATACAGCCTTT+TGG | 0.350504 | 1.2:+60677632 | None:intergenic |
| CAAGCTGTCTAAGTCTGATA+TGG | 0.352317 | 1.2:-60677556 | MS.gene91551:CDS |
| GAAGCTGCTTTCAAGTTGAT+TGG | 0.361899 | 1.2:-60677420 | MS.gene91551:CDS |
| TTTATCACTCAACACCCTAT+TGG | 0.363699 | 1.2:+60677392 | None:intergenic |
| TTGACAAGAGCATAAAATCT+TGG | 0.369389 | 1.2:+60676367 | None:intergenic |
| TGCTGCAGGTTTCCCATTAG+AGG | 0.373658 | 1.2:+60677296 | None:intergenic |
| CAGCATCATGGTCATCTTCA+TGG | 0.379538 | 1.2:+60676647 | None:intergenic |
| AAGCTGCTTTCAAGTTGATT+GGG | 0.381170 | 1.2:-60677419 | MS.gene91551:CDS |
| TTTCTTTATGATTGCTTCCT+CGG | 0.386358 | 1.2:+60677500 | None:intergenic |
| ACATAAAGATGAGAAGATTA+AGG | 0.390025 | 1.2:-60676890 | MS.gene91551:CDS |
| AGTTGATTGGGGAAGCCAAT+AGG | 0.396668 | 1.2:-60677407 | MS.gene91551:CDS |
| CTTCTGACATTCAATCTTGA+AGG | 0.398614 | 1.2:+60676709 | None:intergenic |
| ACAGTTTGGTGCCCCGATAA+AGG | 0.399142 | 1.2:-60677046 | MS.gene91551:CDS |
| TGTATGAAAACATGTGCTAA+TGG | 0.410801 | 1.2:-60676925 | MS.gene91551:CDS |
| CCTGCGTTGGAACCTTTATC+GGG | 0.418804 | 1.2:+60677034 | None:intergenic |
| GTCCAGAATGTCGGCTGTGC+AGG | 0.420134 | 1.2:+60677198 | None:intergenic |
| ACAATGGTCTCTGGACTAGA+AGG | 0.425187 | 1.2:+60676490 | None:intergenic |
| ATGAAGATGGCGAGGTTCAT+TGG | 0.425997 | 1.2:-60676291 | MS.gene91551:CDS |
| TTATAACATATATGTAGAAC+TGG | 0.429465 | 1.2:+60677148 | None:intergenic |
| CTAGAAGGCATATCTGAATC+TGG | 0.435298 | 1.2:+60676505 | None:intergenic |
| CCTCATCCCATCCCTCTAAT+GGG | 0.437981 | 1.2:-60677308 | MS.gene91551:CDS |
| CAAGTAATCTGCAGCTTGAA+AGG | 0.439819 | 1.2:+60676331 | None:intergenic |
| GTTGATTGGGGAAGCCAATA+GGG | 0.442301 | 1.2:-60677406 | MS.gene91551:CDS |
| TTGAATCTCTCTGTTGACTT+TGG | 0.447760 | 1.2:+60676787 | None:intergenic |
| GCACCAAACTGTACAAATGA+TGG | 0.448703 | 1.2:+60677057 | None:intergenic |
| AGATTGTGACTCCATTGGTT+TGG | 0.455595 | 1.2:+60676849 | None:intergenic |
| TCTGAAGATTCTCATGTTCA+AGG | 0.457275 | 1.2:-60676559 | MS.gene91551:CDS |
| TTCAGATGGGGATTCAAAGA+AGG | 0.462344 | 1.2:+60677222 | None:intergenic |
| GGAAATGATTATGAAAAGAA+AGG | 0.462654 | 1.2:-60676760 | MS.gene91551:CDS |
| AGCAGAAACTAAAATGCAAA+GGG | 0.462702 | 1.2:-60677691 | MS.gene91551:CDS |
| CGCACTGAAGTTTGCTAACA+AGG | 0.463840 | 1.2:-60677655 | MS.gene91551:CDS |
| TCAGGACAAACAATGGTCTC+TGG | 0.469282 | 1.2:+60676481 | None:intergenic |
| TGTTCAAGGTGATACGGTAT+TGG | 0.472410 | 1.2:-60676545 | MS.gene91551:CDS |
| CTTACATTTCTGACAGAGTA+GGG | 0.472701 | 1.2:+60677119 | None:intergenic |
| CCCATTAGAGGGATGGGATG+AGG | 0.475230 | 1.2:+60677308 | None:intergenic |
| CAAGCTGCAGATTACTTGGT+TGG | 0.486049 | 1.2:-60676326 | MS.gene91551:CDS |
| GCGGTCTTTATACGACATAA+AGG | 0.497302 | 1.2:-60677364 | MS.gene91551:CDS |
| GACATTCAATCTTGAAGGAT+CGG | 0.499235 | 1.2:+60676714 | None:intergenic |
| TTAGGAACTTGATTTGCTGC+AGG | 0.499707 | 1.2:+60677282 | None:intergenic |
| AAATTATTGAAATCTGGATC+AGG | 0.500522 | 1.2:+60676463 | None:intergenic |
| TTGAACTTACCACAAGCAAT+GGG | 0.504197 | 1.2:+60676253 | None:intergenic |
| TCACAATCTTCAAACAATGT+TGG | 0.509713 | 1.2:-60676835 | MS.gene91551:CDS |
| TAGATGCTGCAGCTCTAACA+TGG | 0.513583 | 1.2:+60677334 | None:intergenic |
| CGGCTGTGCAGGTTTCAGAT+GGG | 0.513871 | 1.2:+60677209 | None:intergenic |
| CAGGTTTCCCATTAGAGGGA+TGG | 0.518826 | 1.2:+60677301 | None:intergenic |
| AGGTTTCCCATTAGAGGGAT+GGG | 0.522178 | 1.2:+60677302 | None:intergenic |
| GGTGGAACACCCGTTGGTAG+TGG | 0.522855 | 1.2:-60676982 | MS.gene91551:CDS |
| TCGGCTGTGCAGGTTTCAGA+TGG | 0.522941 | 1.2:+60677208 | None:intergenic |
| GACTCCATTGGTTTGGACAC+AGG | 0.525130 | 1.2:+60676856 | None:intergenic |
| AAGTAATCTGCAGCTTGAAA+GGG | 0.526697 | 1.2:+60676332 | None:intergenic |
| TTTGAACTTACCACAAGCAA+TGG | 0.531911 | 1.2:+60676252 | None:intergenic |
| TCATCCTTGTTACACTCCAT+TGG | 0.537571 | 1.2:+60677735 | None:intergenic |
| TTCTCATGTTCAAGGTGATA+CGG | 0.537680 | 1.2:-60676551 | MS.gene91551:CDS |
| TTTGAAGATTGTGACTCCAT+TGG | 0.538128 | 1.2:+60676844 | None:intergenic |
| TTCGATGATTCATCTTGTCG+TGG | 0.538609 | 1.2:+60676610 | None:intergenic |
| TCTTACATTTCTGACAGAGT+AGG | 0.540313 | 1.2:+60677118 | None:intergenic |
| TCTGCACATCCACTACCAAC+GGG | 0.540348 | 1.2:+60676973 | None:intergenic |
| CGACATTCTGGACAATGTGC+AGG | 0.540691 | 1.2:-60677188 | MS.gene91551:CDS |
| AAGTCTGATATGGACTGGTA+TGG | 0.542314 | 1.2:-60677546 | MS.gene91551:CDS |
| AGTTTGCTAACAAGGCCAAA+AGG | 0.546529 | 1.2:-60677647 | MS.gene91551:CDS |
| GTCTGCACATCCACTACCAA+CGG | 0.548463 | 1.2:+60676972 | None:intergenic |
| TATTCCTGTGTCCAAACCAA+TGG | 0.549550 | 1.2:-60676860 | MS.gene91551:CDS |
| GCTGCAGGTTTCCCATTAGA+GGG | 0.550927 | 1.2:+60677297 | None:intergenic |
| TAGCAGAAACTAAAATGCAA+AGG | 0.560764 | 1.2:-60677692 | MS.gene91551:CDS |
| AAAACATGTGCTAATGGAGT+TGG | 0.565348 | 1.2:-60676919 | MS.gene91551:CDS |
| TCAGATCCTTGCTGTTTGTG+AGG | 0.565840 | 1.2:-60677598 | MS.gene91551:CDS |
| GAAGCTGACCCAGATGAAGA+TGG | 0.566585 | 1.2:-60676304 | MS.gene91551:CDS |
| TCAGATGGGGATTCAAAGAA+GGG | 0.566815 | 1.2:+60677223 | None:intergenic |
| GGCTGTGCAGGTTTCAGATG+GGG | 0.569621 | 1.2:+60677210 | None:intergenic |
| CCCGATAAAGGTTCCAACGC+AGG | 0.570754 | 1.2:-60677034 | MS.gene91551:CDS |
| TGTCTAAGTCTGATATGGAC+TGG | 0.572481 | 1.2:-60677551 | MS.gene91551:CDS |
| GAACCTCGCCATCTTCATCT+GGG | 0.573701 | 1.2:+60676296 | None:intergenic |
| CCAGCCTCTAAAAGTAATGG+TGG | 0.579951 | 1.2:-60677000 | MS.gene91551:CDS |
| TTCATACATGAAGGATATGA+CGG | 0.584565 | 1.2:+60676940 | None:intergenic |
| AAATCTTGGCATAGCATCAG+TGG | 0.589734 | 1.2:+60676381 | None:intergenic |
| AGGTGATACGGTATTGGAGT+CGG | 0.590303 | 1.2:-60676539 | MS.gene91551:CDS |
| AAACCAGCCTCTAAAAGTAA+TGG | 0.592131 | 1.2:-60677003 | MS.gene91551:CDS |
| CACCAAACTGTACAAATGAT+GGG | 0.592480 | 1.2:+60677058 | None:intergenic |
| ATCTGGATCAGGACAAACAA+TGG | 0.594934 | 1.2:+60676474 | None:intergenic |
| AGCTGCTTTCAAGTTGATTG+GGG | 0.595219 | 1.2:-60677418 | MS.gene91551:CDS |
| CTCACCAATGGAGTGTAACA+AGG | 0.597020 | 1.2:-60677739 | None:intergenic |
| AAAGATGAGAAGATTAAGGA+TGG | 0.602254 | 1.2:-60676886 | MS.gene91551:CDS |
| AGATGCTGCAGCTCTAACAT+GGG | 0.602611 | 1.2:+60677335 | None:intergenic |
| CTTCAAGATTGAATGTCAGA+AGG | 0.611129 | 1.2:-60676708 | MS.gene91551:CDS |
| TAACAAGGATGACGCTGTGA+AGG | 0.611288 | 1.2:-60677724 | MS.gene91551:CDS |
| GAAGGCATATCTGAATCTGG+TGG | 0.636305 | 1.2:+60676508 | None:intergenic |
| GCAGATTTGCCCATTGCTTG+TGG | 0.637267 | 1.2:-60676262 | MS.gene91551:CDS |
| ACAAATGATGGGAAAGTCTG+TGG | 0.637568 | 1.2:+60677069 | None:intergenic |
| CTGCACATTGTCCAGAATGT+CGG | 0.643864 | 1.2:+60677189 | None:intergenic |
| AGTAATGGTGGAACACCCGT+TGG | 0.646014 | 1.2:-60676988 | MS.gene91551:CDS |
| TCTCAGAAAACTACAGATCG+TGG | 0.646401 | 1.2:-60676220 | MS.gene91551:intron |
| CAGATGGGGATTCAAAGAAG+GGG | 0.650743 | 1.2:+60677224 | None:intergenic |
| TGACCCAGATGAAGATGGCG+AGG | 0.654361 | 1.2:-60676299 | MS.gene91551:CDS |
| TCAACAGAGAGATTCAACAC+TGG | 0.681122 | 1.2:-60676781 | MS.gene91551:CDS |
| CTGCGTTGGAACCTTTATCG+GGG | 0.681163 | 1.2:+60677035 | None:intergenic |
| TGTGAACCTCACAAACAGCA+AGG | 0.689042 | 1.2:+60677592 | None:intergenic |
| AATCTGCAGCTTGAAAGGGA+AGG | 0.703720 | 1.2:+60676336 | None:intergenic |
| TGTGTAGCAGATACGAAACA+AGG | 0.710715 | 1.2:-60675241 | MS.gene91551:CDS |
| GCAGAAACTAAAATGCAAAG+GGG | 0.741214 | 1.2:-60677690 | MS.gene91551:CDS |
| TGTTGAGTGATAAAGCAACG+CGG | 0.847765 | 1.2:-60677383 | MS.gene91551:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATACATAAAGACAATTA+AGG | + | chr1.2:60677426-60677445 | None:intergenic | 15.0% |
| !! | CTACATATATGTTATAAATA+AGG | - | chr1.2:60675827-60675846 | MS.gene91551:intron | 15.0% |
| !! | TGATTAAATCCATTTCTTAA+AGG | - | chr1.2:60677288-60677307 | MS.gene91551:CDS | 20.0% |
| !! | TTATAACATATATGTAGAAC+TGG | + | chr1.2:60675824-60675843 | None:intergenic | 20.0% |
| !! | TTCTCAAAATTATTGAAATC+TGG | + | chr1.2:60676515-60676534 | None:intergenic | 20.0% |
| !!! | AGATTTCAATAATTTTGAGA+AGG | - | chr1.2:60676514-60676533 | MS.gene91551:CDS | 20.0% |
| !!! | TTTTGCTGTAAATCAATTAT+GGG | - | chr1.2:60676553-60676572 | MS.gene91551:CDS | 20.0% |
| ! | AAATTATTGAAATCTGGATC+AGG | + | chr1.2:60676509-60676528 | None:intergenic | 25.0% |
| ! | ACATAAAGATGAGAAGATTA+AGG | - | chr1.2:60676079-60676098 | MS.gene91551:intron | 25.0% |
| ! | ATATATGTAGAACTGGAATT+TGG | + | chr1.2:60675817-60675836 | None:intergenic | 25.0% |
| ! | ATCAAAAAACTTGAGGAAAA+AGG | + | chr1.2:60677272-60677291 | None:intergenic | 25.0% |
| ! | CATCAGATTCAGTTTATAAA+AGG | - | chr1.2:60676782-60676801 | MS.gene91551:CDS | 25.0% |
| ! | GAAAATCTGTACAATTCATT+CGG | + | chr1.2:60677043-60677062 | None:intergenic | 25.0% |
| ! | GGAAATGATTATGAAAAGAA+AGG | - | chr1.2:60676209-60676228 | MS.gene91551:intron | 25.0% |
| ! | GGATTTAATCAAAAAACTTG+AGG | + | chr1.2:60677279-60677298 | None:intergenic | 25.0% |
| ! | TTTGACAATATATAACAGAC+AGG | - | chr1.2:60677585-60677604 | MS.gene91551:CDS | 25.0% |
| !! | TTGATAGTAATATAGTATCG+TGG | + | chr1.2:60677544-60677563 | None:intergenic | 25.0% |
| !!! | GTTTTGCTGTAAATCAATTA+TGG | - | chr1.2:60676552-60676571 | MS.gene91551:CDS | 25.0% |
| AAAGATGAGAAGATTAAGGA+TGG | - | chr1.2:60676083-60676102 | MS.gene91551:intron | 30.0% | |
| AAAGCAACACGTTTCATATA+AGG | - | chr1.2:60676295-60676314 | MS.gene91551:CDS | 30.0% | |
| AGCAGAAACTAAAATGCAAA+GGG | - | chr1.2:60675278-60675297 | MS.gene91551:intron | 30.0% | |
| CCTGATAAAAATAAATCTGC+TGG | - | chr1.2:60675522-60675541 | MS.gene91551:intron | 30.0% | |
| GAAAAAGATTCCTCAATCTT+TGG | - | chr1.2:60677169-60677188 | MS.gene91551:CDS | 30.0% | |
| GTAACAAAAAACACAAGACT+AGG | + | chr1.2:60677373-60677392 | None:intergenic | 30.0% | |
| TAGCAGAAACTAAAATGCAA+AGG | - | chr1.2:60675277-60675296 | MS.gene91551:intron | 30.0% | |
| TCACAATCTTCAAACAATGT+TGG | - | chr1.2:60676134-60676153 | MS.gene91551:intron | 30.0% | |
| TCAGAAATTGGGATATCAAT+TGG | - | chr1.2:60676861-60676880 | MS.gene91551:CDS | 30.0% | |
| TGTATGAAAACATGTGCTAA+TGG | - | chr1.2:60676044-60676063 | MS.gene91551:intron | 30.0% | |
| TTCATACATGAAGGATATGA+CGG | + | chr1.2:60676032-60676051 | None:intergenic | 30.0% | |
| TTCTAGATTAAACAGTGTGT+AGG | + | chr1.2:60677345-60677364 | None:intergenic | 30.0% | |
| TTTCCTCCACTATTTAATAC+TGG | + | chr1.2:60677248-60677267 | None:intergenic | 30.0% | |
| TTTCTTTATGATTGCTTCCT+CGG | + | chr1.2:60675472-60675491 | None:intergenic | 30.0% | |
| ! | AAAGTAGCACCTTTAAGAAA+TGG | + | chr1.2:60677300-60677319 | None:intergenic | 30.0% |
| ! | TTGACAAGAGCATAAAATCT+TGG | + | chr1.2:60676605-60676624 | None:intergenic | 30.0% |
| ! | TTGGGCAATTTTCAGAAATT+GGG | - | chr1.2:60676850-60676869 | MS.gene91551:CDS | 30.0% |
| !! | CAATAATTTTGAGAAGGACA+AGG | - | chr1.2:60676520-60676539 | MS.gene91551:CDS | 30.0% |
| !! | TTCTGATGTTTTGTTGCATT+AGG | + | chr1.2:60675708-60675727 | None:intergenic | 30.0% |
| !!! | CCAGCAGATTTATTTTTATC+AGG | + | chr1.2:60675525-60675544 | None:intergenic | 30.0% |
| AAAACATGTGCTAATGGAGT+TGG | - | chr1.2:60676050-60676069 | MS.gene91551:intron | 35.0% | |
| AACAACCATACGACAGAAAT+TGG | + | chr1.2:60677455-60677474 | None:intergenic | 35.0% | |
| AAGTAATCTGCAGCTTGAAA+GGG | + | chr1.2:60676640-60676659 | None:intergenic | 35.0% | |
| AATCTGTACAATTCATTCGG+TGG | + | chr1.2:60677040-60677059 | None:intergenic | 35.0% | |
| ACAACCATACGACAGAAATT+GGG | + | chr1.2:60677454-60677473 | None:intergenic | 35.0% | |
| ACGAACTCAATCTTGTATTG+TGG | - | chr1.2:60677391-60677410 | MS.gene91551:CDS | 35.0% | |
| ATTTCCCAATTTCTGTCGTA+TGG | - | chr1.2:60677447-60677466 | MS.gene91551:CDS | 35.0% | |
| CACCAAACTGTACAAATGAT+GGG | + | chr1.2:60675914-60675933 | None:intergenic | 35.0% | |
| CCAGCTCAAACTTGTAAAAT+TGG | + | chr1.2:60677673-60677692 | None:intergenic | 35.0% | |
| CTTACATTTCTGACAGAGTA+GGG | + | chr1.2:60675853-60675872 | None:intergenic | 35.0% | |
| CTTCAAGATTGAATGTCAGA+AGG | - | chr1.2:60676261-60676280 | MS.gene91551:CDS | 35.0% | |
| CTTCTGACATTCAATCTTGA+AGG | + | chr1.2:60676263-60676282 | None:intergenic | 35.0% | |
| GACATTCAATCTTGAAGGAT+CGG | + | chr1.2:60676258-60676277 | None:intergenic | 35.0% | |
| GCAGAAACTAAAATGCAAAG+GGG | - | chr1.2:60675279-60675298 | MS.gene91551:intron | 35.0% | |
| GGAAATGATCTTAGATATGG+AGG | + | chr1.2:60677479-60677498 | None:intergenic | 35.0% | |
| TCAGACTGAAAAATTATCCG+AGG | - | chr1.2:60675452-60675471 | MS.gene91551:intron | 35.0% | |
| TCAGCTTCAAATATCTCAGT+TGG | + | chr1.2:60677151-60677170 | None:intergenic | 35.0% | |
| TCTGAAGATTCTCATGTTCA+AGG | - | chr1.2:60676410-60676429 | MS.gene91551:CDS | 35.0% | |
| TCTTACATTTCTGACAGAGT+AGG | + | chr1.2:60675854-60675873 | None:intergenic | 35.0% | |
| TTCCCATCATTTGTACAGTT+TGG | - | chr1.2:60675909-60675928 | MS.gene91551:intron | 35.0% | |
| TTCTCATGTTCAAGGTGATA+CGG | - | chr1.2:60676418-60676437 | MS.gene91551:CDS | 35.0% | |
| TTGAACTTACCACAAGCAAT+GGG | + | chr1.2:60676719-60676738 | None:intergenic | 35.0% | |
| TTTATCACTCAACACCCTAT+TGG | + | chr1.2:60675580-60675599 | None:intergenic | 35.0% | |
| TTTGAACTTACCACAAGCAA+TGG | + | chr1.2:60676720-60676739 | None:intergenic | 35.0% | |
| TTTGAAGATTGTGACTCCAT+TGG | + | chr1.2:60676128-60676147 | None:intergenic | 35.0% | |
| ! | AAACCAGCCTCTAAAAGTAA+TGG | - | chr1.2:60675966-60675985 | MS.gene91551:intron | 35.0% |
| ! | AACATGAATGCCGACATTTT+CGG | + | chr1.2:60676951-60676970 | None:intergenic | 35.0% |
| ! | AGAGCACCAGTATTAAATAG+TGG | - | chr1.2:60677239-60677258 | MS.gene91551:CDS | 35.0% |
| ! | ATTAGCCTCTTTGAGAAAAC+TGG | - | chr1.2:60676998-60677017 | MS.gene91551:CDS | 35.0% |
| ! | CCAATTTTACAAGTTTGAGC+TGG | - | chr1.2:60677670-60677689 | MS.gene91551:CDS | 35.0% |
| ! | CTCAATCTTTGGAAGATCAA+GGG | - | chr1.2:60677180-60677199 | MS.gene91551:CDS | 35.0% |
| ! | CTTGGGCAATTTTCAGAAAT+TGG | - | chr1.2:60676849-60676868 | MS.gene91551:CDS | 35.0% |
| ! | GCACATGTTTTCATACATGA+AGG | + | chr1.2:60676041-60676060 | None:intergenic | 35.0% |
| ! | TCACGCTTCAGATAATTTTC+TGG | + | chr1.2:60676896-60676915 | None:intergenic | 35.0% |
| ! | TCAGATTTTGCCGAAAATGT+CGG | - | chr1.2:60676938-60676957 | MS.gene91551:CDS | 35.0% |
| ! | TTTCTCCAGTTTTCTCAAAG+AGG | + | chr1.2:60677006-60677025 | None:intergenic | 35.0% |
| !! | AAGCTGCTTTCAAGTTGATT+GGG | - | chr1.2:60675550-60675569 | MS.gene91551:intron | 35.0% |
| !! | ATCTGTAGTTTTCTGAGAGT+TGG | + | chr1.2:60676747-60676766 | None:intergenic | 35.0% |
| !! | TGTTCCACCATTACTTTTAG+AGG | + | chr1.2:60675976-60675995 | None:intergenic | 35.0% |
| !! | TTGAATCTCTCTGTTGACTT+TGG | + | chr1.2:60676185-60676204 | None:intergenic | 35.0% |
| !! | TTTTAGAAGGAACAGCATCA+TGG | + | chr1.2:60676337-60676356 | None:intergenic | 35.0% |
| !!! | TTACTTTTAGAGGCTGGTTT+TGG | + | chr1.2:60675966-60675985 | None:intergenic | 35.0% |
| AAATCTTGGCATAGCATCAG+TGG | + | chr1.2:60676591-60676610 | None:intergenic | 40.0% | |
| ATCTGGATCAGGACAAACAA+TGG | + | chr1.2:60676498-60676517 | None:intergenic | 40.0% | |
| CAAGCTGTCTAAGTCTGATA+TGG | - | chr1.2:60675413-60675432 | MS.gene91551:intron | 40.0% | |
| CAAGTAATCTGCAGCTTGAA+AGG | + | chr1.2:60676641-60676660 | None:intergenic | 40.0% | |
| CCTTGATCTTCCAAAGATTG+AGG | + | chr1.2:60677182-60677201 | None:intergenic | 40.0% | |
| CGTGTATGAGGGAATTTGAT+GGG | + | chr1.2:60677065-60677084 | None:intergenic | 40.0% | |
| CTTACCTAGGAAAAGTGAAG+GGG | - | chr1.2:60676972-60676991 | MS.gene91551:CDS | 40.0% | |
| CTTCAAATATCTCAGTTGGC+AGG | + | chr1.2:60677147-60677166 | None:intergenic | 40.0% | |
| CTTTCAAGCTGCAGATTACT+TGG | - | chr1.2:60676639-60676658 | MS.gene91551:CDS | 40.0% | |
| GCACCAAACTGTACAAATGA+TGG | + | chr1.2:60675915-60675934 | None:intergenic | 40.0% | |
| GCACCAGTATTAAATAGTGG+AGG | - | chr1.2:60677242-60677261 | MS.gene91551:CDS | 40.0% | |
| GCGGTCTTTATACGACATAA+AGG | - | chr1.2:60675605-60675624 | MS.gene91551:intron | 40.0% | |
| GCTTACCTAGGAAAAGTGAA+GGG | - | chr1.2:60676971-60676990 | MS.gene91551:CDS | 40.0% | |
| GGGGGAAATGATCTTAGATA+TGG | + | chr1.2:60677482-60677501 | None:intergenic | 40.0% | |
| TACCTAGTGTTTCCCAAGAA+GGG | - | chr1.2:60676821-60676840 | MS.gene91551:CDS | 40.0% | |
| TATTCCTGTGTCCAAACCAA+TGG | - | chr1.2:60676109-60676128 | MS.gene91551:intron | 40.0% | |
| TCAACAGAGAGATTCAACAC+TGG | - | chr1.2:60676188-60676207 | MS.gene91551:intron | 40.0% | |
| TCAGATGGGGATTCAAAGAA+GGG | + | chr1.2:60675749-60675768 | None:intergenic | 40.0% | |
| TCGAATTCAAAGCAACCTCT+TGG | + | chr1.2:60677115-60677134 | None:intergenic | 40.0% | |
| TCGTGTATGAGGGAATTTGA+TGG | + | chr1.2:60677066-60677085 | None:intergenic | 40.0% | |
| TCTCAGAAAACTACAGATCG+TGG | - | chr1.2:60676749-60676768 | MS.gene91551:CDS | 40.0% | |
| TGCTTACCTAGGAAAAGTGA+AGG | - | chr1.2:60676970-60676989 | MS.gene91551:CDS | 40.0% | |
| TGTCTAAGTCTGATATGGAC+TGG | - | chr1.2:60675418-60675437 | MS.gene91551:intron | 40.0% | |
| TGTGTAGCAGATACGAAACA+AGG | - | chr1.2:60677728-60677747 | MS.gene91551:CDS | 40.0% | |
| TGTTCAAGGTGATACGGTAT+TGG | - | chr1.2:60676424-60676443 | MS.gene91551:CDS | 40.0% | |
| TGTTGAGTGATAAAGCAACG+CGG | - | chr1.2:60675586-60675605 | MS.gene91551:intron | 40.0% | |
| TTACCTAGTGTTTCCCAAGA+AGG | - | chr1.2:60676820-60676839 | MS.gene91551:CDS | 40.0% | |
| TTCAGATGGGGATTCAAAGA+AGG | + | chr1.2:60675750-60675769 | None:intergenic | 40.0% | |
| TTCGATGATTCATCTTGTCG+TGG | + | chr1.2:60676362-60676381 | None:intergenic | 40.0% | |
| ! | AACATCAGCATACAGCCTTT+TGG | + | chr1.2:60675340-60675359 | None:intergenic | 40.0% |
| ! | ACAAATGATGGGAAAGTCTG+TGG | + | chr1.2:60675903-60675922 | None:intergenic | 40.0% |
| ! | AGATTGTGACTCCATTGGTT+TGG | + | chr1.2:60676123-60676142 | None:intergenic | 40.0% |
| ! | CCTCAATCTTTGGAAGATCA+AGG | - | chr1.2:60677179-60677198 | MS.gene91551:CDS | 40.0% |
| ! | CTAGAAGGCATATCTGAATC+TGG | + | chr1.2:60676467-60676486 | None:intergenic | 40.0% |
| ! | TCTTGTCGTGGCTTTTTAGA+AGG | + | chr1.2:60676350-60676369 | None:intergenic | 40.0% |
| !! | AAGTCTGATATGGACTGGTA+TGG | - | chr1.2:60675423-60675442 | MS.gene91551:intron | 40.0% |
| !! | AGCTGCTTTCAAGTTGATTG+GGG | - | chr1.2:60675551-60675570 | MS.gene91551:intron | 40.0% |
| !! | AGTTTGCTAACAAGGCCAAA+AGG | - | chr1.2:60675322-60675341 | MS.gene91551:intron | 40.0% |
| !! | GAAGCGTGAATTTGCTTTTG+TGG | - | chr1.2:60676907-60676926 | MS.gene91551:CDS | 40.0% |
| !! | GAAGCTGCTTTCAAGTTGAT+TGG | - | chr1.2:60675549-60675568 | MS.gene91551:intron | 40.0% |
| !! | TAAACCCCTTCACTTTTCCT+AGG | + | chr1.2:60676979-60676998 | None:intergenic | 40.0% |
| !! | TTAGGAACTTGATTTGCTGC+AGG | + | chr1.2:60675690-60675709 | None:intergenic | 40.0% |
| !!! | TGAAACGTGTTGCTTTTGTC+TGG | + | chr1.2:60676291-60676310 | None:intergenic | 40.0% |
| AATCTGCAGCTTGAAAGGGA+AGG | + | chr1.2:60676636-60676655 | None:intergenic | 45.0% | |
| ACGTCATGTGGATACCTCTT+TGG | + | chr1.2:60677614-60677633 | None:intergenic | 45.0% | |
| AGGTATCCACATGACGTTAG+TGG | - | chr1.2:60677617-60677636 | MS.gene91551:CDS | 45.0% | |
| AGGTTTCCCATTAGAGGGAT+GGG | + | chr1.2:60675670-60675689 | None:intergenic | 45.0% | |
| AGTTGATTGGGGAAGCCAAT+AGG | - | chr1.2:60675562-60675581 | MS.gene91551:intron | 45.0% | |
| ATGAAGATGGCGAGGTTCAT+TGG | - | chr1.2:60676678-60676697 | MS.gene91551:CDS | 45.0% | |
| ATTCCCTCATACACGATGAG+TGG | - | chr1.2:60677070-60677089 | MS.gene91551:CDS | 45.0% | |
| CAAGCTGCAGATTACTTGGT+TGG | - | chr1.2:60676643-60676662 | MS.gene91551:CDS | 45.0% | |
| CAGATGGGGATTCAAAGAAG+GGG | + | chr1.2:60675748-60675767 | None:intergenic | 45.0% | |
| CAGCATCATGGTCATCTTCA+TGG | + | chr1.2:60676325-60676344 | None:intergenic | 45.0% | |
| CTGCACATTGTCCAGAATGT+CGG | + | chr1.2:60675783-60675802 | None:intergenic | 45.0% | |
| GTTGATTGGGGAAGCCAATA+GGG | - | chr1.2:60675563-60675582 | MS.gene91551:intron | 45.0% | |
| TAACAAGGATGACGCTGTGA+AGG | - | chr1.2:60675245-60675264 | MS.gene91551:CDS | 45.0% | |
| TCACATCCACTAACGTCATG+TGG | + | chr1.2:60677626-60677645 | None:intergenic | 45.0% | |
| TCAGGACAAACAATGGTCTC+TGG | + | chr1.2:60676491-60676510 | None:intergenic | 45.0% | |
| TCCCAAGAAGGGAGAAACTT+GGG | - | chr1.2:60676832-60676851 | MS.gene91551:CDS | 45.0% | |
| TGTGAACCTCACAAACAGCA+AGG | + | chr1.2:60675380-60675399 | None:intergenic | 45.0% | |
| TTCCCAAGAAGGGAGAAACT+TGG | - | chr1.2:60676831-60676850 | MS.gene91551:CDS | 45.0% | |
| TTCCCTCATACACGATGAGT+GGG | - | chr1.2:60677071-60677090 | MS.gene91551:CDS | 45.0% | |
| ! | ACAATGGTCTCTGGACTAGA+AGG | + | chr1.2:60676482-60676501 | None:intergenic | 45.0% |
| ! | AGATGCTGCAGCTCTAACAT+GGG | + | chr1.2:60675637-60675656 | None:intergenic | 45.0% |
| ! | AGGTGATACGGTATTGGAGT+CGG | - | chr1.2:60676430-60676449 | MS.gene91551:CDS | 45.0% |
| ! | ATCTAAGATCATTTCCCCCC+AGG | - | chr1.2:60677483-60677502 | MS.gene91551:CDS | 45.0% |
| ! | CCAGCCTCTAAAAGTAATGG+TGG | - | chr1.2:60675969-60675988 | MS.gene91551:intron | 45.0% |
| ! | GAAGGCATATCTGAATCTGG+TGG | + | chr1.2:60676464-60676483 | None:intergenic | 45.0% |
| ! | GGCATTCATGTTGCTTACCT+AGG | - | chr1.2:60676959-60676978 | MS.gene91551:CDS | 45.0% |
| ! | TAGATGCTGCAGCTCTAACA+TGG | + | chr1.2:60675638-60675657 | None:intergenic | 45.0% |
| ! | TCTAAGATCATTTCCCCCCA+GGG | - | chr1.2:60677484-60677503 | MS.gene91551:CDS | 45.0% |
| ! | TCTTTGGAAGATCAAGGGAG+AGG | - | chr1.2:60677185-60677204 | MS.gene91551:CDS | 45.0% |
| ! | TGCTTTGAATTCGATCCTGC+TGG | - | chr1.2:60677121-60677140 | MS.gene91551:CDS | 45.0% |
| !! | CCACCATTACTTTTAGAGGC+TGG | + | chr1.2:60675972-60675991 | None:intergenic | 45.0% |
| !! | CGCACTGAAGTTTGCTAACA+AGG | - | chr1.2:60675314-60675333 | MS.gene91551:intron | 45.0% |
| !! | CTCTCTGTTGACTTTGGTTC+TGG | + | chr1.2:60676179-60676198 | None:intergenic | 45.0% |
| !! | TCAGATCCTTGCTGTTTGTG+AGG | - | chr1.2:60675371-60675390 | MS.gene91551:intron | 45.0% |
| !!! | CTTTTAGAGGCTGGTTTTGG+TGG | + | chr1.2:60675963-60675982 | None:intergenic | 45.0% |
| ACACGATGAGTGGGACTGAA+AGG | - | chr1.2:60677080-60677099 | MS.gene91551:CDS | 50.0% | |
| ACCTCATCCCATCCCTCTAA+TGG | - | chr1.2:60675660-60675679 | MS.gene91551:intron | 50.0% | |
| AGTCCCACTCATCGTGTATG+AGG | + | chr1.2:60677077-60677096 | None:intergenic | 50.0% | |
| ATGAGTGGGACTGAAAGGGA+AGG | - | chr1.2:60677085-60677104 | MS.gene91551:CDS | 50.0% | |
| ATGTAACAATAGCGCCCCTG+GGG | + | chr1.2:60677502-60677521 | None:intergenic | 50.0% | |
| CACGATGAGTGGGACTGAAA+GGG | - | chr1.2:60677081-60677100 | MS.gene91551:CDS | 50.0% | |
| CAGGTTTCCCATTAGAGGGA+TGG | + | chr1.2:60675671-60675690 | None:intergenic | 50.0% | |
| CATGTAACAATAGCGCCCCT+GGG | + | chr1.2:60677503-60677522 | None:intergenic | 50.0% | |
| CCTCATCCCATCCCTCTAAT+GGG | - | chr1.2:60675661-60675680 | MS.gene91551:intron | 50.0% | |
| CCTGCGTTGGAACCTTTATC+GGG | + | chr1.2:60675938-60675957 | None:intergenic | 50.0% | |
| CGACATTCTGGACAATGTGC+AGG | - | chr1.2:60675781-60675800 | MS.gene91551:intron | 50.0% | |
| CTAAGATCATTTCCCCCCAG+GGG | - | chr1.2:60677485-60677504 | MS.gene91551:CDS | 50.0% | |
| CTCCCTTCTTGGGAAACACT+AGG | + | chr1.2:60676826-60676845 | None:intergenic | 50.0% | |
| CTGCGTTGGAACCTTTATCG+GGG | + | chr1.2:60675937-60675956 | None:intergenic | 50.0% | |
| GAACCTCGCCATCTTCATCT+GGG | + | chr1.2:60676676-60676695 | None:intergenic | 50.0% | |
| GAAGCTGACCCAGATGAAGA+TGG | - | chr1.2:60676665-60676684 | MS.gene91551:CDS | 50.0% | |
| GCAGATTTGCCCATTGCTTG+TGG | - | chr1.2:60676707-60676726 | MS.gene91551:CDS | 50.0% | |
| GCCCAAGTTTCTCCCTTCTT+GGG | + | chr1.2:60676836-60676855 | None:intergenic | 50.0% | |
| GCCTGCGTTGGAACCTTTAT+CGG | + | chr1.2:60675939-60675958 | None:intergenic | 50.0% | |
| GCTGCAGGTTTCCCATTAGA+GGG | + | chr1.2:60675675-60675694 | None:intergenic | 50.0% | |
| GTCCCACTCATCGTGTATGA+GGG | + | chr1.2:60677076-60677095 | None:intergenic | 50.0% | |
| GTCTGCACATCCACTACCAA+CGG | + | chr1.2:60676000-60676019 | None:intergenic | 50.0% | |
| TAACAGACAGGTCGCCAAAG+AGG | - | chr1.2:60677597-60677616 | MS.gene91551:CDS | 50.0% | |
| TCATGTAACAATAGCGCCCC+TGG | + | chr1.2:60677504-60677523 | None:intergenic | 50.0% | |
| TCTGCACATCCACTACCAAC+GGG | + | chr1.2:60675999-60676018 | None:intergenic | 50.0% | |
| TGAACCTCGCCATCTTCATC+TGG | + | chr1.2:60676677-60676696 | None:intergenic | 50.0% | |
| TGCCCAAGTTTCTCCCTTCT+TGG | + | chr1.2:60676837-60676856 | None:intergenic | 50.0% | |
| TGCTGCAGGTTTCCCATTAG+AGG | + | chr1.2:60675676-60675695 | None:intergenic | 50.0% | |
| ! | AGTAATGGTGGAACACCCGT+TGG | - | chr1.2:60675981-60676000 | MS.gene91551:intron | 50.0% |
| !! | ACAGTTTGGTGCCCCGATAA+AGG | - | chr1.2:60675923-60675942 | MS.gene91551:intron | 50.0% |
| !! | GAAAGGGAAGGTGTTCCAAG+AGG | - | chr1.2:60677097-60677116 | MS.gene91551:CDS | 50.0% |
| !! | GACTCCATTGGTTTGGACAC+AGG | + | chr1.2:60676116-60676135 | None:intergenic | 50.0% |
| AACCTGCACAGCCGACATTC+TGG | - | chr1.2:60675769-60675788 | MS.gene91551:intron | 55.0% | |
| CCCATTAGAGGGATGGGATG+AGG | + | chr1.2:60675664-60675683 | None:intergenic | 55.0% | |
| CCCGATAAAGGTTCCAACGC+AGG | - | chr1.2:60675935-60675954 | MS.gene91551:intron | 55.0% | |
| CGGCTGTGCAGGTTTCAGAT+GGG | + | chr1.2:60675763-60675782 | None:intergenic | 55.0% | |
| GGCTGTGCAGGTTTCAGATG+GGG | + | chr1.2:60675762-60675781 | None:intergenic | 55.0% | |
| TCGGCTGTGCAGGTTTCAGA+TGG | + | chr1.2:60675764-60675783 | None:intergenic | 55.0% | |
| TGACCCAGATGAAGATGGCG+AGG | - | chr1.2:60676670-60676689 | MS.gene91551:CDS | 55.0% | |
| TGTAACAATAGCGCCCCTGG+GGG | + | chr1.2:60677501-60677520 | None:intergenic | 55.0% | |
| ATCTCAGTTGGCAGGCCAGC+AGG | + | chr1.2:60677139-60677158 | None:intergenic | 60.0% | |
| GTAACAATAGCGCCCCTGGG+GGG | + | chr1.2:60677500-60677519 | None:intergenic | 60.0% | |
| ! | GGTGGAACACCCGTTGGTAG+TGG | - | chr1.2:60675987-60676006 | MS.gene91551:intron | 60.0% |
| ! | GTCCAGAATGTCGGCTGTGC+AGG | + | chr1.2:60675774-60675793 | None:intergenic | 60.0% |
| !! | GGTTTTGGTGGAGCCTGCGT+TGG | + | chr1.2:60675951-60675970 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 60675237 | 60677754 | 60675237 | ID=MS.gene91551 |
| chr1.2 | mRNA | 60675237 | 60677754 | 60675237 | ID=MS.gene91551.t1;Parent=MS.gene91551 |
| chr1.2 | exon | 60676221 | 60677754 | 60676221 | ID=MS.gene91551.t1.exon1;Parent=MS.gene91551.t1 |
| chr1.2 | CDS | 60676221 | 60677754 | 60676221 | ID=cds.MS.gene91551.t1;Parent=MS.gene91551.t1 |
| chr1.2 | exon | 60675237 | 60675268 | 60675237 | ID=MS.gene91551.t1.exon2;Parent=MS.gene91551.t1 |
| chr1.2 | CDS | 60675237 | 60675268 | 60675237 | ID=cds.MS.gene91551.t1;Parent=MS.gene91551.t1 |
| Gene Sequence |
| Protein sequence |
