Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93910.t1 | XP_013455261.1 | 99 | 512 | 5 | 0 | 1 | 512 | 107 | 618 | 4.40E-290 | 1006.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93910.t1 | Q291H5 | 55.8 | 373 | 156 | 2 | 5 | 370 | 130 | 500 | 1.7e-117 | 424.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93910.t1 | A0A072UHZ4 | 99.0 | 512 | 5 | 0 | 1 | 512 | 107 | 618 | 3.2e-290 | 1006.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene93910 | 0.808444 | 3.09E-50 | -1.69E-46 |
| MS.gene049341 | MS.gene93910 | 0.835648 | 1.48E-56 | -1.69E-46 |
| MS.gene049824 | MS.gene93910 | 0.830421 | 2.97E-55 | -1.69E-46 |
| MS.gene049850 | MS.gene93910 | 0.80035 | 1.50E-48 | -1.69E-46 |
| MS.gene050277 | MS.gene93910 | 0.803719 | 3.05E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene93910 | 0.816169 | 6.35E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene93910 | 0.811607 | 6.43E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene93910 | 0.807809 | 4.22E-50 | -1.69E-46 |
| MS.gene051328 | MS.gene93910 | 0.825239 | 5.22E-54 | -1.69E-46 |
| MS.gene05157 | MS.gene93910 | 0.805417 | 1.35E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene93910 | 0.802607 | 5.18E-49 | -1.69E-46 |
| MS.gene052133 | MS.gene93910 | 0.805282 | 1.44E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene93910 | 0.80826 | 3.38E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene93910 | 0.818665 | 1.74E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene93910 | 0.804286 | 2.32E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene93910 | 0.808648 | 2.79E-50 | -1.69E-46 |
| MS.gene05462 | MS.gene93910 | 0.838588 | 2.63E-57 | -1.69E-46 |
| MS.gene055465 | MS.gene93910 | 0.839508 | 1.52E-57 | -1.69E-46 |
| MS.gene055466 | MS.gene93910 | 0.834821 | 2.40E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene93910 | 0.831616 | 1.51E-55 | -1.69E-46 |
| MS.gene055469 | MS.gene93910 | 0.816933 | 4.28E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene93910 | 0.821167 | 4.66E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene93910 | -0.812913 | 3.34E-51 | -1.69E-46 |
| MS.gene055891 | MS.gene93910 | 0.817401 | 3.36E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene93910 | -0.813832 | 2.10E-51 | -1.69E-46 |
| MS.gene057057 | MS.gene93910 | 0.827258 | 1.73E-54 | -1.69E-46 |
| MS.gene058084 | MS.gene93910 | 0.808532 | 2.96E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene93910 | 0.843353 | 1.48E-58 | -1.69E-46 |
| MS.gene060194 | MS.gene93910 | 0.810414 | 1.17E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene93910 | 0.853694 | 2.02E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene36348 | MS.gene93910 | PPI |
| MS.gene85146 | MS.gene93910 | PPI |
| MS.gene93910 | MS.gene025347 | PPI |
| MS.gene93910 | MS.gene062116 | PPI |
| MS.gene85145 | MS.gene93910 | PPI |
| MS.gene93910 | MS.gene85342 | PPI |
| MS.gene93910 | MS.gene76530 | PPI |
| MS.gene93910 | MS.gene069865 | PPI |
| MS.gene93910 | MS.gene070139 | PPI |
| MS.gene36347 | MS.gene93910 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93910.t1 | MTR_4g033210 | 99.023 | 512 | 5 | 0 | 1 | 512 | 107 | 618 | 0.0 | 1046 |
| MS.gene93910.t1 | MTR_5g021230 | 24.939 | 413 | 240 | 12 | 15 | 369 | 186 | 586 | 1.29e-26 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93910.t1 | AT1G72090 | 67.647 | 510 | 135 | 5 | 1 | 509 | 119 | 599 | 0.0 | 701 |
| MS.gene93910.t1 | AT4G36390 | 24.823 | 423 | 246 | 14 | 7 | 369 | 207 | 617 | 2.76e-25 | 110 |
Find 103 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTTGATAAGGCTCTTT+TGG | 0.133036 | 4.4:-70195968 | MS.gene93910:CDS |
| CCAATTAATGTTGGTTGTTT+AGG | 0.201753 | 4.4:-70199640 | MS.gene93910:CDS |
| CCTAAACAACCAACATTAAT+TGG | 0.244538 | 4.4:+70199640 | None:intergenic |
| AAGGCAAAGTGGAAAGAATT+TGG | 0.247160 | 4.4:-70197131 | MS.gene93910:CDS |
| GTCTTAGGTTTAGTGTTCTT+TGG | 0.248640 | 4.4:-70195900 | MS.gene93910:CDS |
| TTGCTTTATTAGTTTGTCTT+AGG | 0.260565 | 4.4:-70195915 | MS.gene93910:CDS |
| CTTCTCTTCACCACATTACT+TGG | 0.264756 | 4.4:+70197207 | None:intergenic |
| TTCAAGTGCTCAAGGATAAA+AGG | 0.293438 | 4.4:+70198998 | None:intergenic |
| GATATAATATGTGGATTTCC+AGG | 0.335774 | 4.4:-70198727 | MS.gene93910:intron |
| TTCCCACAAGCACAAGATTC+TGG | 0.347283 | 4.4:+70196189 | None:intergenic |
| TTCTGAGATTTCACAAGTCT+TGG | 0.354694 | 4.4:+70196215 | None:intergenic |
| ACCTGCGGCAAGAATGAAAA+AGG | 0.355796 | 4.4:-70197232 | MS.gene93910:CDS |
| CTGATGGAGTTAAAGAAATA+TGG | 0.362385 | 4.4:-70199336 | MS.gene93910:CDS |
| TTGCCTTCCATCCCAGAGTA+TGG | 0.378724 | 4.4:+70197147 | None:intergenic |
| CTGAACTGGCACATGCAAAA+AGG | 0.379014 | 4.4:+70198937 | None:intergenic |
| CAAAGACATTTGTCAATTCA+CGG | 0.382984 | 4.4:+70197181 | None:intergenic |
| CTGGAAGGGATCAGCATTGT+AGG | 0.383351 | 4.4:-70199922 | MS.gene93910:CDS |
| GAATCATTCACGCCATACTC+TGG | 0.389654 | 4.4:-70197159 | MS.gene93910:CDS |
| AGCTGGTAATTCTGCTACTA+AGG | 0.395120 | 4.4:+70199060 | None:intergenic |
| AAAGGAAGAATCTGCACAAA+AGG | 0.397088 | 4.4:-70196053 | MS.gene93910:CDS |
| GTTGTAGAGGAGACTTTAAA+AGG | 0.399227 | 4.4:-70199871 | MS.gene93910:CDS |
| ACCTTAACTGAGCTTGTGCC+GGG | 0.402416 | 4.4:-70198766 | MS.gene93910:CDS |
| TACAGTGTCCCTTGAATTGT+CGG | 0.404396 | 4.4:+70196128 | None:intergenic |
| CCTTCCCACAGATGTTATCT+TGG | 0.407575 | 4.4:+70196347 | None:intergenic |
| AGATTTCACAAGTCTTGGTT+TGG | 0.413329 | 4.4:+70196220 | None:intergenic |
| CAACAACGCGATCAATTTGC+TGG | 0.415734 | 4.4:+70199896 | None:intergenic |
| AAGCGCTGGCAATGTCTTAC+GGG | 0.416449 | 4.4:+70199828 | None:intergenic |
| AAGAAAGGAGCATGAGAAAG+TGG | 0.418448 | 4.4:-70195993 | MS.gene93910:CDS |
| AATAAACCACTAGTTGTTGC+TGG | 0.419430 | 4.4:-70199979 | MS.gene93910:CDS |
| CAAGCGCTGGCAATGTCTTA+CGG | 0.420275 | 4.4:+70199827 | None:intergenic |
| ACTAAGGCATTCAATAAAGT+TGG | 0.424272 | 4.4:+70199076 | None:intergenic |
| CCCCGGCACAAGCTCAGTTA+AGG | 0.435890 | 4.4:+70198765 | None:intergenic |
| AGCATAGTGCTTGCATCAGC+TGG | 0.438177 | 4.4:+70199043 | None:intergenic |
| TTGAGAAGACCGACAATTCA+AGG | 0.440687 | 4.4:-70196137 | MS.gene93910:CDS |
| AAAGTGGGACTTTGTTGATA+AGG | 0.441838 | 4.4:-70195977 | MS.gene93910:CDS |
| CAATAAAGCTTTGAACAAAC+AGG | 0.443124 | 4.4:-70196277 | MS.gene93910:CDS |
| TTGGATGGATACTGAGGAAA+AGG | 0.450909 | 4.4:-70196071 | MS.gene93910:CDS |
| TTGCATGTGCCAGTTCAGTC+TGG | 0.452847 | 4.4:-70198932 | MS.gene93910:CDS |
| TCACATCTCGACTTCCTTGA+GGG | 0.467101 | 4.4:+70199950 | None:intergenic |
| AGTGAAGATACCGGAGCATA+TGG | 0.472936 | 4.4:-70199307 | MS.gene93910:intron |
| TACCTTAACTGAGCTTGTGC+CGG | 0.473023 | 4.4:-70198767 | MS.gene93910:CDS |
| ATGGATACCATCATAACAAA+AGG | 0.483104 | 4.4:-70200012 | MS.gene93910:CDS |
| GAACTTCCAAGCATATCATC+TGG | 0.486695 | 4.4:+70196378 | None:intergenic |
| GCATCACTTCCAGACTGAAC+TGG | 0.492471 | 4.4:+70198923 | None:intergenic |
| GCAAGCACTATGCTGCGTAT+TGG | 0.495273 | 4.4:-70199034 | MS.gene93910:CDS |
| GATCTGATCTAAAGCAAGAA+AGG | 0.497761 | 4.4:-70196008 | MS.gene93910:CDS |
| CTGAAGGTTGGTCATACAAA+GGG | 0.500724 | 4.4:-70196426 | MS.gene93910:intron |
| CTCAAGGATAAAAGGTGGAT+TGG | 0.509294 | 4.4:+70199006 | None:intergenic |
| TTCACATCTCGACTTCCTTG+AGG | 0.511443 | 4.4:+70199949 | None:intergenic |
| GAGCCAGAATCTTGTGCTTG+TGG | 0.516083 | 4.4:-70196192 | MS.gene93910:CDS |
| AGCCAGAATCTTGTGCTTGT+GGG | 0.517247 | 4.4:-70196191 | MS.gene93910:CDS |
| TGCAACTGATGGAGTTCACT+TGG | 0.521540 | 4.4:-70197097 | MS.gene93910:intron |
| ATTGCCACTGATATAATATG+TGG | 0.524293 | 4.4:-70198736 | MS.gene93910:CDS |
| AATCATTCACGCCATACTCT+GGG | 0.529461 | 4.4:-70197158 | MS.gene93910:CDS |
| AAGTCGAGATGTGAAAGAGC+TGG | 0.532706 | 4.4:-70199941 | MS.gene93910:CDS |
| ATTACTGATATTGCAACTGA+TGG | 0.536300 | 4.4:-70197108 | MS.gene93910:CDS |
| GAACAAACAGGTTCCTACTC+AGG | 0.537765 | 4.4:-70196265 | MS.gene93910:CDS |
| CTTTAAAAGGTCACGAAGTG+AGG | 0.543654 | 4.4:-70199858 | MS.gene93910:CDS |
| ATTGCTCCAGATGATATGCT+TGG | 0.546633 | 4.4:-70196384 | MS.gene93910:CDS |
| CTATCTCTTTCAAGTGCTCA+AGG | 0.546786 | 4.4:+70198990 | None:intergenic |
| TATCTATTGTGTAACTCCCT+AGG | 0.546949 | 4.4:+70199578 | None:intergenic |
| TTTGAATTCATACCTTTGGA+AGG | 0.548972 | 4.4:+70199803 | None:intergenic |
| AGTTTGCTCAAAATCTTCAT+CGG | 0.549560 | 4.4:+70198329 | None:intergenic |
| ATTTGTTTGGATGGATACTG+AGG | 0.551888 | 4.4:-70196077 | MS.gene93910:CDS |
| GTAGAAAGTGAACTTGCCTC+AGG | 0.554829 | 4.4:-70196030 | MS.gene93910:CDS |
| CTCTGGGATGGAAGGCAAAG+TGG | 0.556380 | 4.4:-70197142 | MS.gene93910:CDS |
| GAGATTCTTCCAATTAATGT+TGG | 0.562618 | 4.4:-70199649 | MS.gene93910:CDS |
| ACCTTTGGAAGGTCAAGCGC+TGG | 0.564190 | 4.4:+70199814 | None:intergenic |
| AAGGAAGAATCTGCACAAAA+GGG | 0.564610 | 4.4:-70196052 | MS.gene93910:CDS |
| GTTGCTGGCTGTGTCCCTCA+AGG | 0.566523 | 4.4:-70199964 | MS.gene93910:CDS |
| ACGCCATACTCTGGGATGGA+AGG | 0.569239 | 4.4:-70197150 | MS.gene93910:CDS |
| GTAAAATCTGTGGTATCTGA+TGG | 0.573159 | 4.4:-70199352 | MS.gene93910:CDS |
| CGAGATGTGAAAGAGCTGGA+AGG | 0.575668 | 4.4:-70199937 | MS.gene93910:CDS |
| TCAGTGGCAATCTGCATCCC+CGG | 0.575983 | 4.4:+70198748 | None:intergenic |
| TTAGAAATTACCATATGCTC+CGG | 0.576298 | 4.4:+70199297 | None:intergenic |
| TATGCTTGGAAGTTCAGCTC+TGG | 0.580362 | 4.4:-70196370 | MS.gene93910:CDS |
| AAACATGCTCGAGGTCACCT+AGG | 0.587931 | 4.4:-70199595 | MS.gene93910:CDS |
| TCGCGTTGTTGAAGTTGTAG+AGG | 0.590773 | 4.4:-70199884 | MS.gene93910:CDS |
| CCAGATCACACACCTGGTCG+AGG | 0.591497 | 4.4:+70198252 | None:intergenic |
| GAGATGTGAAAGAGCTGGAA+GGG | 0.591544 | 4.4:-70199936 | MS.gene93910:CDS |
| TGAGAAGACCGACAATTCAA+GGG | 0.600489 | 4.4:-70196136 | MS.gene93910:CDS |
| CTGGCCAAGATAACATCTGT+GGG | 0.605676 | 4.4:-70196351 | MS.gene93910:CDS |
| AAGTGCTCAAGGATAAAAGG+TGG | 0.609787 | 4.4:+70199001 | None:intergenic |
| AGATAACATCTGTGGGAAGG+TGG | 0.611853 | 4.4:-70196344 | MS.gene93910:CDS |
| AACATGCTCGAGGTCACCTA+GGG | 0.613729 | 4.4:-70199594 | MS.gene93910:CDS |
| ATTCACGCCATACTCTGGGA+TGG | 0.613962 | 4.4:-70197154 | MS.gene93910:CDS |
| AGAAAGGAGCATGAGAAAGT+GGG | 0.617963 | 4.4:-70195992 | MS.gene93910:CDS |
| GCTGAAGGTTGGTCATACAA+AGG | 0.618455 | 4.4:-70196427 | MS.gene93910:intron |
| AGAGAAGACATATCCTGAGT+AGG | 0.619463 | 4.4:+70196252 | None:intergenic |
| TTGCTTTAGATCAGATCCTG+AGG | 0.623187 | 4.4:+70196014 | None:intergenic |
| AAATCCACATATTATATCAG+TGG | 0.624202 | 4.4:+70198732 | None:intergenic |
| CCAAGATAACATCTGTGGGA+AGG | 0.625892 | 4.4:-70196347 | MS.gene93910:CDS |
| TCTGGCCAAGATAACATCTG+TGG | 0.625993 | 4.4:-70196352 | MS.gene93910:CDS |
| GCACTTGAAAGAGATAGCAG+AGG | 0.626453 | 4.4:-70198984 | MS.gene93910:CDS |
| ACACAGCCAGCAACAACTAG+TGG | 0.634478 | 4.4:+70199973 | None:intergenic |
| TGGCTGAGCAGTGAAGATAC+CGG | 0.637316 | 4.4:-70199316 | MS.gene93910:CDS |
| GCCAGCGCTTGACCTTCCAA+AGG | 0.638812 | 4.4:-70199815 | MS.gene93910:intron |
| ATGAATCGAGAATATACTGT+GGG | 0.644518 | 4.4:-70198811 | MS.gene93910:CDS |
| CCTTAACTGAGCTTGTGCCG+GGG | 0.671188 | 4.4:-70198765 | MS.gene93910:CDS |
| TGCAAGACAAAACATGCTCG+AGG | 0.679994 | 4.4:-70199604 | MS.gene93910:CDS |
| GGTTGGGCGTGTAAAATCTG+TGG | 0.710077 | 4.4:-70199362 | MS.gene93910:CDS |
| AATGAATCGAGAATATACTG+TGG | 0.719912 | 4.4:-70198812 | MS.gene93910:CDS |
| AAAATGAATAGGGACACCTG+CGG | 0.776532 | 4.4:-70197247 | MS.gene93910:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATTCCATTAATATT+AGG | - | chr4.4:70198878-70198897 | MS.gene93910:intron | 10.0% |
| !! | ATATTAATGAAAAAATGAAT+AGG | - | chr4.4:70198645-70198664 | MS.gene93910:intron | 10.0% |
| !! | ATTAAATAACATAATACATA+TGG | + | chr4.4:70196171-70196190 | None:intergenic | 10.0% |
| !! | TATTAATGAAAAAATGAATA+GGG | - | chr4.4:70198646-70198665 | MS.gene93910:intron | 10.0% |
| !!! | ATAAACATTTTTCTAATTTT+TGG | - | chr4.4:70198101-70198120 | MS.gene93910:intron | 10.0% |
| !!! | TTGTTTTTTGTTTTTTTTTT+TGG | - | chr4.4:70197809-70197828 | MS.gene93910:intron | 10.0% |
| !! | TAATATAATGCATTCATTTA+TGG | - | chr4.4:70199423-70199442 | MS.gene93910:intron | 15.0% |
| !!! | AAATCATAACTTCATTTTTT+AGG | - | chr4.4:70197690-70197709 | MS.gene93910:intron | 15.0% |
| !!! | ATTTTTTTTCTTGCAATAAA+AGG | - | chr4.4:70197854-70197873 | MS.gene93910:intron | 15.0% |
| !!! | CAAAATAACAAAAATTTGTT+TGG | - | chr4.4:70199813-70199832 | MS.gene93910:intron | 15.0% |
| !!! | CTTGTCATTTATTATTATAT+TGG | + | chr4.4:70197355-70197374 | None:intergenic | 15.0% |
| !!! | TTTTATTGCAAGAAAAAAAA+TGG | + | chr4.4:70197855-70197874 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTTTTTTTGGA+AGG | - | chr4.4:70197813-70197832 | MS.gene93910:intron | 15.0% |
| !!! | TTTTTTTTCTTGCAATAAAA+GGG | - | chr4.4:70197855-70197874 | MS.gene93910:intron | 15.0% |
| !! | AAAGTTTAGAAACAAATAAC+TGG | + | chr4.4:70199033-70199052 | None:intergenic | 20.0% |
| !! | AACTGATGAAATCTTATAAT+TGG | - | chr4.4:70197377-70197396 | MS.gene93910:intron | 20.0% |
| !! | ACTGATGAAATCTTATAATT+GGG | - | chr4.4:70197378-70197397 | MS.gene93910:intron | 20.0% |
| !! | ATGTATGAACAAAATATCTA+CGG | - | chr4.4:70199212-70199231 | MS.gene93910:intron | 20.0% |
| !! | ATTGATATAGATAATCTAGA+TGG | - | chr4.4:70197491-70197510 | MS.gene93910:intron | 20.0% |
| !! | CATATGGTAATTTCTAATAT+TGG | - | chr4.4:70196612-70196631 | MS.gene93910:intron | 20.0% |
| !! | GTTGTATCATTAACAAAAAA+AGG | + | chr4.4:70198151-70198170 | None:intergenic | 20.0% |
| !! | TTAATTCTATGTGTAACAAA+TGG | - | chr4.4:70197237-70197256 | MS.gene93910:CDS | 20.0% |
| !!! | ATAACAAAAATTTGTTTGGA+TGG | - | chr4.4:70199817-70199836 | MS.gene93910:CDS | 20.0% |
| !!! | TATGATAGTATTTTTTAGTC+AGG | + | chr4.4:70198084-70198103 | None:intergenic | 20.0% |
| !!! | TTTTTGTTATTTTGATTCTG+TGG | + | chr4.4:70199807-70199826 | None:intergenic | 20.0% |
| ! | AAATCCACATATTATATCAG+TGG | + | chr4.4:70197174-70197193 | None:intergenic | 25.0% |
| ! | ATATTGTCAGTTTGAAGATA+AGG | + | chr4.4:70198629-70198648 | None:intergenic | 25.0% |
| ! | ATCACATGATTAAAATGATC+TGG | - | chr4.4:70197467-70197486 | MS.gene93910:intron | 25.0% |
| ! | CTGATGAAATCTTATAATTG+GGG | - | chr4.4:70197379-70197398 | MS.gene93910:intron | 25.0% |
| ! | GTAGATATTGAATCATGATT+TGG | - | chr4.4:70198841-70198860 | MS.gene93910:intron | 25.0% |
| ! | TATTAATTCATCACTAATGC+AGG | - | chr4.4:70196520-70196539 | MS.gene93910:intron | 25.0% |
| ! | TCCATTAATATTAGGATTTG+TGG | - | chr4.4:70198886-70198905 | MS.gene93910:intron | 25.0% |
| ! | TGTTACACATAGAATTAAGA+AGG | + | chr4.4:70197235-70197254 | None:intergenic | 25.0% |
| ! | TTAGTAACTATTCAAAAGGA+AGG | + | chr4.4:70198025-70198044 | None:intergenic | 25.0% |
| ! | TTTGTTCAAATAATTGCCAT+CGG | - | chr4.4:70198296-70198315 | MS.gene93910:CDS | 25.0% |
| !! | ACAGTATTTGAGACTTTAAT+TGG | - | chr4.4:70199088-70199107 | MS.gene93910:CDS | 25.0% |
| !! | AGAACTTGTATTCTTTTATG+AGG | + | chr4.4:70197605-70197624 | None:intergenic | 25.0% |
| !! | ATTTTCCATACAAAATGAAC+AGG | + | chr4.4:70196138-70196157 | None:intergenic | 25.0% |
| !! | TAATTCCTGTTCATTTTGTA+TGG | - | chr4.4:70196130-70196149 | MS.gene93910:CDS | 25.0% |
| !! | TATTTGAGACTTTAATTGGT+TGG | - | chr4.4:70199092-70199111 | MS.gene93910:CDS | 25.0% |
| !! | TATTTTGTTCATACATCCAA+CGG | + | chr4.4:70199208-70199227 | None:intergenic | 25.0% |
| !!! | AATGTTTTGATGTTGAGTTT+AGG | - | chr4.4:70196742-70196761 | MS.gene93910:intron | 25.0% |
| !!! | AATTTTTTCTTCAATGCTGA+AGG | - | chr4.4:70199461-70199480 | MS.gene93910:intron | 25.0% |
| !!! | AGATTTTCCTTTTGTTATGA+TGG | + | chr4.4:70195901-70195920 | None:intergenic | 25.0% |
| !!! | GAGTTTAGGTTTTATATCAA+TGG | - | chr4.4:70196756-70196775 | MS.gene93910:intron | 25.0% |
| !!! | TCATACTAACAGTTATTTCT+TGG | - | chr4.4:70197535-70197554 | MS.gene93910:intron | 25.0% |
| !!! | TTGCTTTATTAGTTTGTCTT+AGG | - | chr4.4:70199988-70200007 | MS.gene93910:CDS | 25.0% |
| !!! | TTTTTTTGGAAGGAAGATTT+AGG | - | chr4.4:70197823-70197842 | MS.gene93910:intron | 25.0% |
| AAGCTACTATGATAGTTTAG+AGG | - | chr4.4:70197733-70197752 | MS.gene93910:intron | 30.0% | |
| AATGAATCGAGAATATACTG+TGG | - | chr4.4:70197091-70197110 | MS.gene93910:intron | 30.0% | |
| ATGAATCGAGAATATACTGT+GGG | - | chr4.4:70197092-70197111 | MS.gene93910:intron | 30.0% | |
| ATGGATACCATCATAACAAA+AGG | - | chr4.4:70195891-70195910 | MS.gene93910:CDS | 30.0% | |
| ATGTATATGCACTAGTCAAA+AGG | + | chr4.4:70196701-70196720 | None:intergenic | 30.0% | |
| ATTACTGATATTGCAACTGA+TGG | - | chr4.4:70198795-70198814 | MS.gene93910:CDS | 30.0% | |
| ATTGCCACTGATATAATATG+TGG | - | chr4.4:70197167-70197186 | MS.gene93910:CDS | 30.0% | |
| CAAAGACATTTGTCAATTCA+CGG | + | chr4.4:70198725-70198744 | None:intergenic | 30.0% | |
| CAAGTTTGAATTCATACCTT+TGG | + | chr4.4:70196107-70196126 | None:intergenic | 30.0% | |
| CCACTTAGTAACTATTCAAA+AGG | + | chr4.4:70198029-70198048 | None:intergenic | 30.0% | |
| CCTAAACAACCAACATTAAT+TGG | + | chr4.4:70196266-70196285 | None:intergenic | 30.0% | |
| CTCTTGAATTTGTGAATAAG+AGG | - | chr4.4:70197274-70197293 | MS.gene93910:intron | 30.0% | |
| CTGATGGAGTTAAAGAAATA+TGG | - | chr4.4:70196567-70196586 | MS.gene93910:intron | 30.0% | |
| GAAAAACCCTTACAATACTA+TGG | - | chr4.4:70197021-70197040 | MS.gene93910:intron | 30.0% | |
| GAGATTCTTCCAATTAATGT+TGG | - | chr4.4:70196254-70196273 | MS.gene93910:CDS | 30.0% | |
| GATATAATATGTGGATTTCC+AGG | - | chr4.4:70197176-70197195 | MS.gene93910:CDS | 30.0% | |
| GCCACAAATCCTAATATTAA+TGG | + | chr4.4:70198890-70198909 | None:intergenic | 30.0% | |
| GGGTTTCAACAAAATAATCA+CGG | + | chr4.4:70198915-70198934 | None:intergenic | 30.0% | |
| GTGATGAATTAATAGATGTG+AGG | + | chr4.4:70196514-70196533 | None:intergenic | 30.0% | |
| TAACTATTCAAAAGGAAGGA+TGG | + | chr4.4:70198021-70198040 | None:intergenic | 30.0% | |
| TCTTATTCGTAAGCTATTTG+AGG | - | chr4.4:70198409-70198428 | MS.gene93910:intron | 30.0% | |
| TGCCTAATATTAAGTCATGT+CGG | + | chr4.4:70197904-70197923 | None:intergenic | 30.0% | |
| TGTATATGCACTAGTCAAAA+GGG | + | chr4.4:70196700-70196719 | None:intergenic | 30.0% | |
| TGTTGAGAAAAAAGAAAGAG+AGG | - | chr4.4:70199296-70199315 | MS.gene93910:intron | 30.0% | |
| TTAGAAATTACCATATGCTC+CGG | + | chr4.4:70196609-70196628 | None:intergenic | 30.0% | |
| TTGTTCAAATAATTGCCATC+GGG | - | chr4.4:70198297-70198316 | MS.gene93910:CDS | 30.0% | |
| TTTGAATTCATACCTTTGGA+AGG | + | chr4.4:70196103-70196122 | None:intergenic | 30.0% | |
| ! | ACTAAGGCATTCAATAAAGT+TGG | + | chr4.4:70196830-70196849 | None:intergenic | 30.0% |
| ! | AGTTTGCTCAAAATCTTCAT+CGG | + | chr4.4:70197577-70197596 | None:intergenic | 30.0% |
| ! | CCAATTAATGTTGGTTGTTT+AGG | - | chr4.4:70196263-70196282 | MS.gene93910:CDS | 30.0% |
| ! | CCTTTTGAATAGTTACTAAG+TGG | - | chr4.4:70198026-70198045 | MS.gene93910:intron | 30.0% |
| ! | CTTAGATCATGATGTTTTAC+AGG | - | chr4.4:70196782-70196801 | MS.gene93910:intron | 30.0% |
| ! | TCACTACTAAAGTACTTACA+AGG | + | chr4.4:70196352-70196371 | None:intergenic | 30.0% |
| ! | TTTTGCATAACCTAATTGCT+TGG | + | chr4.4:70196724-70196743 | None:intergenic | 30.0% |
| !! | AATTTGCTGTTCATATGCTA+AGG | - | chr4.4:70198257-70198276 | MS.gene93910:intron | 30.0% |
| !! | CAATAAAGCTTTGAACAAAC+AGG | - | chr4.4:70199626-70199645 | MS.gene93910:CDS | 30.0% |
| !! | GCTTACAATAAACTTTTTCC+TGG | + | chr4.4:70198965-70198984 | None:intergenic | 30.0% |
| !! | TTTGTTGATAAGGCTCTTTT+GGG | - | chr4.4:70199936-70199955 | MS.gene93910:CDS | 30.0% |
| !!! | CTTTCTTTTTTCTCAACAAG+AGG | + | chr4.4:70199294-70199313 | None:intergenic | 30.0% |
| !!! | TTATCATGCTTTTTTACCGT+TGG | - | chr4.4:70199189-70199208 | MS.gene93910:intron | 30.0% |
| AAAAACATTGTGCGACTATC+GGG | + | chr4.4:70199062-70199081 | None:intergenic | 35.0% | |
| AAAAGAAAGAGAGGTTGTGA+TGG | - | chr4.4:70199305-70199324 | MS.gene93910:intron | 35.0% | |
| AAAGAAAGAGAGGTTGTGAT+GGG | - | chr4.4:70199306-70199325 | MS.gene93910:intron | 35.0% | |
| AAAGGAAGAATCTGCACAAA+AGG | - | chr4.4:70199850-70199869 | MS.gene93910:CDS | 35.0% | |
| AAAGTGGGACTTTGTTGATA+AGG | - | chr4.4:70199926-70199945 | MS.gene93910:CDS | 35.0% | |
| AACCCTTACAATACTATGGA+TGG | - | chr4.4:70197025-70197044 | MS.gene93910:intron | 35.0% | |
| AAGGAAGAATCTGCACAAAA+GGG | - | chr4.4:70199851-70199870 | MS.gene93910:CDS | 35.0% | |
| AAGGCAAAGTGGAAAGAATT+TGG | - | chr4.4:70198772-70198791 | MS.gene93910:CDS | 35.0% | |
| AATAAACCACTAGTTGTTGC+TGG | - | chr4.4:70195924-70195943 | MS.gene93910:CDS | 35.0% | |
| AATGAATGCAAGATAACCTC+TGG | + | chr4.4:70198594-70198613 | None:intergenic | 35.0% | |
| AATTCATCACTAATGCAGGT+TGG | - | chr4.4:70196524-70196543 | MS.gene93910:intron | 35.0% | |
| ACAATAGCACCTAGAAAAAG+TGG | + | chr4.4:70197960-70197979 | None:intergenic | 35.0% | |
| ACTATGATAGTTTAGAGGCA+GGG | - | chr4.4:70197738-70197757 | MS.gene93910:intron | 35.0% | |
| AGATTTCACAAGTCTTGGTT+TGG | + | chr4.4:70199686-70199705 | None:intergenic | 35.0% | |
| ATAAGCATCTTACACAAAGG+GGG | + | chr4.4:70198570-70198589 | None:intergenic | 35.0% | |
| ATATTCTCGATTCATTGCCT+GGG | + | chr4.4:70197087-70197106 | None:intergenic | 35.0% | |
| ATTAAGACTATGCACTAACC+TGG | + | chr4.4:70197197-70197216 | None:intergenic | 35.0% | |
| ATTCATCACTAATGCAGGTT+GGG | - | chr4.4:70196525-70196544 | MS.gene93910:intron | 35.0% | |
| ATTTGTTTGGATGGATACTG+AGG | - | chr4.4:70199826-70199845 | MS.gene93910:CDS | 35.0% | |
| CACCATCCATAGTATTGTAA+GGG | + | chr4.4:70197030-70197049 | None:intergenic | 35.0% | |
| CACCGACATGACTTAATATT+AGG | - | chr4.4:70197899-70197918 | MS.gene93910:intron | 35.0% | |
| CATAAGCATCTTACACAAAG+GGG | + | chr4.4:70198571-70198590 | None:intergenic | 35.0% | |
| CTAATATTAAGTCATGTCGG+TGG | + | chr4.4:70197901-70197920 | None:intergenic | 35.0% | |
| GAAAAACATTGTGCGACTAT+CGG | + | chr4.4:70199063-70199082 | None:intergenic | 35.0% | |
| GAAAAAGGTTCCAAGTAATG+TGG | - | chr4.4:70198686-70198705 | MS.gene93910:intron | 35.0% | |
| GCAGGTTCATGACAATTAAA+GGG | + | chr4.4:70198935-70198954 | None:intergenic | 35.0% | |
| GCATAAGCATCTTACACAAA+GGG | + | chr4.4:70198572-70198591 | None:intergenic | 35.0% | |
| GCATATACATCCAAGCAATT+AGG | - | chr4.4:70196711-70196730 | MS.gene93910:intron | 35.0% | |
| GGGTGCTCCAAATAAATTTA+AGG | - | chr4.4:70197875-70197894 | MS.gene93910:intron | 35.0% | |
| GTAAAATCTGTGGTATCTGA+TGG | - | chr4.4:70196551-70196570 | MS.gene93910:intron | 35.0% | |
| GTCTTAGGTTTAGTGTTCTT+TGG | - | chr4.4:70200003-70200022 | MS.gene93910:CDS | 35.0% | |
| GTTGTAGAGGAGACTTTAAA+AGG | - | chr4.4:70196032-70196051 | MS.gene93910:CDS | 35.0% | |
| TACTATGATAGTTTAGAGGC+AGG | - | chr4.4:70197737-70197756 | MS.gene93910:intron | 35.0% | |
| TATATTCTCGATTCATTGCC+TGG | + | chr4.4:70197088-70197107 | None:intergenic | 35.0% | |
| TATCTATTGTGTAACTCCCT+AGG | + | chr4.4:70196328-70196347 | None:intergenic | 35.0% | |
| TCACCATCCATAGTATTGTA+AGG | + | chr4.4:70197031-70197050 | None:intergenic | 35.0% | |
| TGCAAAAAGGAGTAAACACA+TGG | + | chr4.4:70196956-70196975 | None:intergenic | 35.0% | |
| TTAATATTCACTACCTCCCA+TGG | - | chr4.4:70199260-70199279 | MS.gene93910:intron | 35.0% | |
| TTCAAGTGCTCAAGGATAAA+AGG | + | chr4.4:70196908-70196927 | None:intergenic | 35.0% | |
| TTCTTTCTCACCTGTTACAA+AGG | + | chr4.4:70196224-70196243 | None:intergenic | 35.0% | |
| TTGTAAGTGTACTCAAACAC+TGG | - | chr4.4:70198481-70198500 | MS.gene93910:intron | 35.0% | |
| ! | AAGAGATAGCAGAGGTTTTA+CGG | - | chr4.4:70196927-70196946 | MS.gene93910:intron | 35.0% |
| ! | GATCTGATCTAAAGCAAGAA+AGG | - | chr4.4:70199895-70199914 | MS.gene93910:CDS | 35.0% |
| ! | TCGGTGGCCTTAAATTTATT+TGG | + | chr4.4:70197885-70197904 | None:intergenic | 35.0% |
| ! | TTTTCTTCAATGCTGAAGGT+TGG | - | chr4.4:70199465-70199484 | MS.gene93910:intron | 35.0% |
| !! | CTTTGTTGATAAGGCTCTTT+TGG | - | chr4.4:70199935-70199954 | MS.gene93910:CDS | 35.0% |
| !! | GCCTACTCACTTGTTATAAA+GGG | - | chr4.4:70197982-70198001 | MS.gene93910:intron | 35.0% |
| !! | TAAACTTTTTCCTGGCACTT+AGG | + | chr4.4:70198957-70198976 | None:intergenic | 35.0% |
| !! | TGCCTACTCACTTGTTATAA+AGG | - | chr4.4:70197981-70198000 | MS.gene93910:intron | 35.0% |
| !! | TTCTGAGATTTCACAAGTCT+TGG | + | chr4.4:70199691-70199710 | None:intergenic | 35.0% |
| !!! | CTTTCAGTTCCACTTTTTCT+AGG | - | chr4.4:70197948-70197967 | MS.gene93910:intron | 35.0% |
| !!! | GTTATTTCTTGGCCTTTTTC+AGG | - | chr4.4:70197546-70197565 | MS.gene93910:intron | 35.0% |
| !!! | TTTTAGGATGAAACTGATGC+AGG | - | chr4.4:70197706-70197725 | MS.gene93910:intron | 35.0% |
| AAAATGAATAGGGACACCTG+CGG | - | chr4.4:70198656-70198675 | MS.gene93910:intron | 40.0% | |
| AAGTGCTCAAGGATAAAAGG+TGG | + | chr4.4:70196905-70196924 | None:intergenic | 40.0% | |
| AATCATTCACGCCATACTCT+GGG | - | chr4.4:70198745-70198764 | MS.gene93910:CDS | 40.0% | |
| ACAGTCACTCACCAAATAGA+GGG | + | chr4.4:70199358-70199377 | None:intergenic | 40.0% | |
| ACCTAAGATAGCGAGATTAG+GGG | + | chr4.4:70198198-70198217 | None:intergenic | 40.0% | |
| AGAAGTCACATGTTCAGAGT+AGG | + | chr4.4:70199400-70199419 | None:intergenic | 40.0% | |
| AGAGAAGACATATCCTGAGT+AGG | + | chr4.4:70199654-70199673 | None:intergenic | 40.0% | |
| AGCTGGTAATTCTGCTACTA+AGG | + | chr4.4:70196846-70196865 | None:intergenic | 40.0% | |
| ATTGCCTGGGATATTCAGAT+TGG | + | chr4.4:70197074-70197093 | None:intergenic | 40.0% | |
| ATTGCTCCAGATGATATGCT+TGG | - | chr4.4:70199519-70199538 | MS.gene93910:intron | 40.0% | |
| CACCTAAGATAGCGAGATTA+GGG | + | chr4.4:70198199-70198218 | None:intergenic | 40.0% | |
| CACCTGTTACAAAGGTTGAA+AGG | + | chr4.4:70196216-70196235 | None:intergenic | 40.0% | |
| CAGACCATCCAAATTCTATC+GGG | + | chr4.4:70198330-70198349 | None:intergenic | 40.0% | |
| CCAGACCATCCAAATTCTAT+CGG | + | chr4.4:70198331-70198350 | None:intergenic | 40.0% | |
| CTCAAGGATAAAAGGTGGAT+TGG | + | chr4.4:70196900-70196919 | None:intergenic | 40.0% | |
| CTTCTCTTCACCACATTACT+TGG | + | chr4.4:70198699-70198718 | None:intergenic | 40.0% | |
| GAACTTCCAAGCATATCATC+TGG | + | chr4.4:70199528-70199547 | None:intergenic | 40.0% | |
| GAGATTAGGGGAGGAAAAAA+AGG | + | chr4.4:70198186-70198205 | None:intergenic | 40.0% | |
| GCCCTTTATAACAAGTGAGT+AGG | + | chr4.4:70197986-70198005 | None:intergenic | 40.0% | |
| GGCAGGTTCATGACAATTAA+AGG | + | chr4.4:70198936-70198955 | None:intergenic | 40.0% | |
| GGCATAAGCATCTTACACAA+AGG | + | chr4.4:70198573-70198592 | None:intergenic | 40.0% | |
| TACAGTGTCCCTTGAATTGT+CGG | + | chr4.4:70199778-70199797 | None:intergenic | 40.0% | |
| TACTCTGAACATGTGACTTC+TGG | - | chr4.4:70199399-70199418 | MS.gene93910:intron | 40.0% | |
| TCACATGTGTGTGATATGTG+AGG | + | chr4.4:70196476-70196495 | None:intergenic | 40.0% | |
| TCACCTAAGATAGCGAGATT+AGG | + | chr4.4:70198200-70198219 | None:intergenic | 40.0% | |
| TGAGAAGACCGACAATTCAA+GGG | - | chr4.4:70199767-70199786 | MS.gene93910:intron | 40.0% | |
| TGCCTTTCAACCTTTGTAAC+AGG | - | chr4.4:70196211-70196230 | MS.gene93910:CDS | 40.0% | |
| TTGACCAATCTGAATATCCC+AGG | - | chr4.4:70197067-70197086 | MS.gene93910:intron | 40.0% | |
| TTGAGAAGACCGACAATTCA+AGG | - | chr4.4:70199766-70199785 | MS.gene93910:intron | 40.0% | |
| TTGGATGGATACTGAGGAAA+AGG | - | chr4.4:70199832-70199851 | MS.gene93910:CDS | 40.0% | |
| ! | AAGAAAGGAGCATGAGAAAG+TGG | - | chr4.4:70199910-70199929 | MS.gene93910:CDS | 40.0% |
| ! | AGAAAGGAGCATGAGAAAGT+GGG | - | chr4.4:70199911-70199930 | MS.gene93910:CDS | 40.0% |
| ! | CTATCTCTTTCAAGTGCTCA+AGG | + | chr4.4:70196916-70196935 | None:intergenic | 40.0% |
| ! | CTGAAGGTTGGTCATACAAA+GGG | - | chr4.4:70199477-70199496 | MS.gene93910:intron | 40.0% |
| ! | CTTTAAAAGGTCACGAAGTG+AGG | - | chr4.4:70196045-70196064 | MS.gene93910:CDS | 40.0% |
| ! | TCACAATTTTATCCTCGACC+AGG | - | chr4.4:70197639-70197658 | MS.gene93910:intron | 40.0% |
| ! | TGTTTTACAGGTCGTGACAT+TGG | - | chr4.4:70196794-70196813 | MS.gene93910:intron | 40.0% |
| !! | TCATCGGTTTCACCTGAAAA+AGG | + | chr4.4:70197561-70197580 | None:intergenic | 40.0% |
| AAGGCCCGATAGAATTTGGA+TGG | - | chr4.4:70198323-70198342 | MS.gene93910:CDS | 45.0% | |
| AAGTCGAGATGTGAAAGAGC+TGG | - | chr4.4:70195962-70195981 | MS.gene93910:CDS | 45.0% | |
| AATAATTGCCATCGGGCCAA+AGG | - | chr4.4:70198304-70198323 | MS.gene93910:CDS | 45.0% | |
| ACCAAATAGAGGGTGGTGTA+GGG | + | chr4.4:70199348-70199367 | None:intergenic | 45.0% | |
| ACCTGCGGCAAGAATGAAAA+AGG | - | chr4.4:70198671-70198690 | MS.gene93910:intron | 45.0% | |
| AGATAACATCTGTGGGAAGG+TGG | - | chr4.4:70199559-70199578 | MS.gene93910:intron | 45.0% | |
| AGCCAGAATCTTGTGCTTGT+GGG | - | chr4.4:70199712-70199731 | MS.gene93910:intron | 45.0% | |
| AGTGAAGATACCGGAGCATA+TGG | - | chr4.4:70196596-70196615 | MS.gene93910:intron | 45.0% | |
| CAACAACGCGATCAATTTGC+TGG | + | chr4.4:70196010-70196029 | None:intergenic | 45.0% | |
| CACAGTCACTCACCAAATAG+AGG | + | chr4.4:70199359-70199378 | None:intergenic | 45.0% | |
| CCAAGATAACATCTGTGGGA+AGG | - | chr4.4:70199556-70199575 | MS.gene93910:intron | 45.0% | |
| CCGATAGAATTTGGATGGTC+TGG | - | chr4.4:70198328-70198347 | MS.gene93910:CDS | 45.0% | |
| CCTCACATTTCACACACATG+CGG | - | chr4.4:70196435-70196454 | MS.gene93910:intron | 45.0% | |
| CCTTCCCACAGATGTTATCT+TGG | + | chr4.4:70199559-70199578 | None:intergenic | 45.0% | |
| CTCACATTTCACACACATGC+GGG | - | chr4.4:70196436-70196455 | MS.gene93910:intron | 45.0% | |
| CTGAACTGGCACATGCAAAA+AGG | + | chr4.4:70196969-70196988 | None:intergenic | 45.0% | |
| CTGATGGAGTTCACTTGGTA+AGG | - | chr4.4:70198811-70198830 | MS.gene93910:CDS | 45.0% | |
| CTGGCCAAGATAACATCTGT+GGG | - | chr4.4:70199552-70199571 | MS.gene93910:intron | 45.0% | |
| GAACAAACAGGTTCCTACTC+AGG | - | chr4.4:70199638-70199657 | MS.gene93910:CDS | 45.0% | |
| GAATCATTCACGCCATACTC+TGG | - | chr4.4:70198744-70198763 | MS.gene93910:CDS | 45.0% | |
| GAGATGTGAAAGAGCTGGAA+GGG | - | chr4.4:70195967-70195986 | MS.gene93910:CDS | 45.0% | |
| GCACTTGAAAGAGATAGCAG+AGG | - | chr4.4:70196919-70196938 | MS.gene93910:intron | 45.0% | |
| GTGCGCAAATTTGTGCAAGA+GGG | + | chr4.4:70196402-70196421 | None:intergenic | 45.0% | |
| GTGTAAGATGCTTATGCCAG+AGG | - | chr4.4:70198575-70198594 | MS.gene93910:intron | 45.0% | |
| GTTCTCCAATAGCATAGCCA+TGG | - | chr4.4:70199119-70199138 | MS.gene93910:intron | 45.0% | |
| TAAGATAGCGAGATTAGGGG+AGG | + | chr4.4:70198195-70198214 | None:intergenic | 45.0% | |
| TACCTTAACTGAGCTTGTGC+CGG | - | chr4.4:70197136-70197155 | MS.gene93910:CDS | 45.0% | |
| TATGCTTGGAAGTTCAGCTC+TGG | - | chr4.4:70199533-70199552 | MS.gene93910:intron | 45.0% | |
| TCACATCTCGACTTCCTTGA+GGG | + | chr4.4:70195956-70195975 | None:intergenic | 45.0% | |
| TCCAAATTCTATCGGGCCTT+TGG | + | chr4.4:70198323-70198342 | None:intergenic | 45.0% | |
| TCCCCTAATCTCGCTATCTT+AGG | - | chr4.4:70198194-70198213 | MS.gene93910:intron | 45.0% | |
| TCGCGTTGTTGAAGTTGTAG+AGG | - | chr4.4:70196019-70196038 | MS.gene93910:CDS | 45.0% | |
| TCTGGCCAAGATAACATCTG+TGG | - | chr4.4:70199551-70199570 | MS.gene93910:intron | 45.0% | |
| TGCAACTGATGGAGTTCACT+TGG | - | chr4.4:70198806-70198825 | MS.gene93910:CDS | 45.0% | |
| TGCAAGACAAAACATGCTCG+AGG | - | chr4.4:70196299-70196318 | MS.gene93910:CDS | 45.0% | |
| TGTGCGCAAATTTGTGCAAG+AGG | + | chr4.4:70196403-70196422 | None:intergenic | 45.0% | |
| TGTTCATGCACAGAACCTAG+TGG | + | chr4.4:70197774-70197793 | None:intergenic | 45.0% | |
| TTCACATCTCGACTTCCTTG+AGG | + | chr4.4:70195957-70195976 | None:intergenic | 45.0% | |
| TTCCCACAAGCACAAGATTC+TGG | + | chr4.4:70199717-70199736 | None:intergenic | 45.0% | |
| ! | AGTTTAGAGGCAGGGTATCT+TGG | - | chr4.4:70197746-70197765 | MS.gene93910:intron | 45.0% |
| ! | GCTGAAGGTTGGTCATACAA+AGG | - | chr4.4:70199476-70199495 | MS.gene93910:intron | 45.0% |
| ! | TGGGAAGGTGGTCAGTTTTT+GGG | - | chr4.4:70199571-70199590 | MS.gene93910:intron | 45.0% |
| !! | ACCTTTTTCATTCTTGCCGC+AGG | + | chr4.4:70198675-70198694 | None:intergenic | 45.0% |
| !! | AGATTTTGACGCGCAGGTTA+AGG | - | chr4.4:70199237-70199256 | MS.gene93910:intron | 45.0% |
| !! | GTTGATAAGGCTCTTTTGGG+TGG | - | chr4.4:70199939-70199958 | MS.gene93910:CDS | 45.0% |
| !!! | TATGTTATTTAATTTAATTT+GGG | - | chr4.4:70196178-70196197 | MS.gene93910:CDS | 5.0% |
| !!! | TTATGTTATTTAATTTAATT+TGG | - | chr4.4:70196177-70196196 | MS.gene93910:CDS | 5.0% |
| AAACATGCTCGAGGTCACCT+AGG | - | chr4.4:70196308-70196327 | MS.gene93910:CDS | 50.0% | |
| AACATGCTCGAGGTCACCTA+GGG | - | chr4.4:70196309-70196328 | MS.gene93910:CDS | 50.0% | |
| ACACAGCCAGCAACAACTAG+TGG | + | chr4.4:70195933-70195952 | None:intergenic | 50.0% | |
| ACCTTAACTGAGCTTGTGCC+GGG | - | chr4.4:70197137-70197156 | MS.gene93910:CDS | 50.0% | |
| AGCATAGTGCTTGCATCAGC+TGG | + | chr4.4:70196863-70196882 | None:intergenic | 50.0% | |
| ATAGCATAGCCATGGTCTGG+AGG | - | chr4.4:70199127-70199146 | MS.gene93910:intron | 50.0% | |
| CACCAAATAGAGGGTGGTGT+AGG | + | chr4.4:70199349-70199368 | None:intergenic | 50.0% | |
| CCAATAGCATAGCCATGGTC+TGG | - | chr4.4:70199124-70199143 | MS.gene93910:intron | 50.0% | |
| CCAGACCATGGCTATGCTAT+TGG | + | chr4.4:70199127-70199146 | None:intergenic | 50.0% | |
| CCGCATGTGTGTGAAATGTG+AGG | + | chr4.4:70196438-70196457 | None:intergenic | 50.0% | |
| CGAGATGTGAAAGAGCTGGA+AGG | - | chr4.4:70195966-70195985 | MS.gene93910:CDS | 50.0% | |
| CTGGAAGGGATCAGCATTGT+AGG | - | chr4.4:70195981-70196000 | MS.gene93910:CDS | 50.0% | |
| GAGCCAGAATCTTGTGCTTG+TGG | - | chr4.4:70199711-70199730 | MS.gene93910:intron | 50.0% | |
| GCAAGCACTATGCTGCGTAT+TGG | - | chr4.4:70196869-70196888 | MS.gene93910:intron | 50.0% | |
| GCATCACTTCCAGACTGAAC+TGG | + | chr4.4:70196983-70197002 | None:intergenic | 50.0% | |
| GCCAAAGGCCCGATAGAATT+TGG | - | chr4.4:70198319-70198338 | MS.gene93910:CDS | 50.0% | |
| GGTTGGGCGTGTAAAATCTG+TGG | - | chr4.4:70196541-70196560 | MS.gene93910:intron | 50.0% | |
| GTCACTCACCAAATAGAGGG+TGG | + | chr4.4:70199355-70199374 | None:intergenic | 50.0% | |
| TAGCATAGCCATGGTCTGGA+GGG | - | chr4.4:70199128-70199147 | MS.gene93910:intron | 50.0% | |
| TCCCTACACCACCCTCTATT+TGG | - | chr4.4:70199344-70199363 | MS.gene93910:CDS | 50.0% | |
| TGGCTGAGCAGTGAAGATAC+CGG | - | chr4.4:70196587-70196606 | MS.gene93910:intron | 50.0% | |
| TTGCATGTGCCAGTTCAGTC+TGG | - | chr4.4:70196971-70196990 | MS.gene93910:intron | 50.0% | |
| TTGCCTTCCATCCCAGAGTA+TGG | + | chr4.4:70198759-70198778 | None:intergenic | 50.0% | |
| ! | ATTCACGCCATACTCTGGGA+TGG | - | chr4.4:70198749-70198768 | MS.gene93910:CDS | 50.0% |
| ! | CTTTTTCCTGGCACTTAGGC+AGG | + | chr4.4:70198953-70198972 | None:intergenic | 50.0% |
| ! | GAAAGAGAGGTTGTGATGGG+AGG | - | chr4.4:70199309-70199328 | MS.gene93910:CDS | 50.0% |
| ! | GGGAAGGTGGTCAGTTTTTG+GGG | - | chr4.4:70199572-70199591 | MS.gene93910:intron | 50.0% |
| ! | GTGGGAAGGTGGTCAGTTTT+TGG | - | chr4.4:70199570-70199589 | MS.gene93910:intron | 50.0% |
| !! | AAGCGCTGGCAATGTCTTAC+GGG | + | chr4.4:70196078-70196097 | None:intergenic | 50.0% |
| !! | CAAGCGCTGGCAATGTCTTA+CGG | + | chr4.4:70196079-70196098 | None:intergenic | 50.0% |
| AACAAGAGGCCCTGAGACCA+TGG | + | chr4.4:70199280-70199299 | None:intergenic | 55.0% | |
| ACAAGAGGCCCTGAGACCAT+GGG | + | chr4.4:70199279-70199298 | None:intergenic | 55.0% | |
| CACTACCTCCCATGGTCTCA+GGG | - | chr4.4:70199268-70199287 | MS.gene93910:intron | 55.0% | |
| CATGAACCTGCCTAAGTGCC+AGG | - | chr4.4:70198944-70198963 | MS.gene93910:CDS | 55.0% | |
| CCTTAACTGAGCTTGTGCCG+GGG | - | chr4.4:70197138-70197157 | MS.gene93910:CDS | 55.0% | |
| GATGTGCCAGATCACACACC+TGG | + | chr4.4:70197660-70197679 | None:intergenic | 55.0% | |
| TCACTACCTCCCATGGTCTC+AGG | - | chr4.4:70199267-70199286 | MS.gene93910:intron | 55.0% | |
| TCAGTGGCAATCTGCATCCC+CGG | + | chr4.4:70197158-70197177 | None:intergenic | 55.0% | |
| ! | ACCTTTGGAAGGTCAAGCGC+TGG | + | chr4.4:70196092-70196111 | None:intergenic | 55.0% |
| ! | CAGGGTATCTTGGCTCCACT+AGG | - | chr4.4:70197756-70197775 | MS.gene93910:intron | 55.0% |
| !! | ACGCCATACTCTGGGATGGA+AGG | - | chr4.4:70198753-70198772 | MS.gene93910:CDS | 55.0% |
| !! | ACGGTCAGATTTTGACGCGC+AGG | - | chr4.4:70199231-70199250 | MS.gene93910:intron | 55.0% |
| !! | CTCTGGGATGGAAGGCAAAG+TGG | - | chr4.4:70198761-70198780 | MS.gene93910:CDS | 55.0% |
| !! | GAGGGTGCTGTCTAGGATGT+GGG | - | chr4.4:70199146-70199165 | MS.gene93910:intron | 55.0% |
| AGACAGCACCCTCCAGACCA+TGG | + | chr4.4:70199139-70199158 | None:intergenic | 60.0% | |
| CCAGATCACACACCTGGTCG+AGG | + | chr4.4:70197654-70197673 | None:intergenic | 60.0% | |
| CCCCGGCACAAGCTCAGTTA+AGG | + | chr4.4:70197141-70197160 | None:intergenic | 60.0% | |
| CCTCGACCAGGTGTGTGATC+TGG | - | chr4.4:70197651-70197670 | MS.gene93910:intron | 60.0% | |
| GCCAGCGCTTGACCTTCCAA+AGG | - | chr4.4:70196088-70196107 | MS.gene93910:CDS | 60.0% | |
| ! | GTTGCTGGCTGTGTCCCTCA+AGG | - | chr4.4:70195939-70195958 | MS.gene93910:CDS | 60.0% |
| !! | GGAGGGTGCTGTCTAGGATG+TGG | - | chr4.4:70199145-70199164 | MS.gene93910:intron | 60.0% |
| !! | TGGTCTGGAGGGTGCTGTCT+AGG | - | chr4.4:70199139-70199158 | MS.gene93910:intron | 60.0% |
| AGAGGCCCTGAGACCATGGG+AGG | + | chr4.4:70199276-70199295 | None:intergenic | 65.0% | |
| CTATCGGGCCTTTGGCCCGA+TGG | + | chr4.4:70198315-70198334 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 70195891 | 70200034 | 70195891 | ID=MS.gene93910 |
| chr4.4 | mRNA | 70195891 | 70200034 | 70195891 | ID=MS.gene93910.t1;Parent=MS.gene93910 |
| chr4.4 | exon | 70199816 | 70200034 | 70199816 | ID=MS.gene93910.t1.exon1;Parent=MS.gene93910.t1 |
| chr4.4 | CDS | 70199816 | 70200034 | 70199816 | ID=cds.MS.gene93910.t1;Parent=MS.gene93910.t1 |
| chr4.4 | exon | 70199573 | 70199692 | 70199573 | ID=MS.gene93910.t1.exon2;Parent=MS.gene93910.t1 |
| chr4.4 | CDS | 70199573 | 70199692 | 70199573 | ID=cds.MS.gene93910.t1;Parent=MS.gene93910.t1 |
| chr4.4 | exon | 70199308 | 70199383 | 70199308 | ID=MS.gene93910.t1.exon3;Parent=MS.gene93910.t1 |
| chr4.4 | CDS | 70199308 | 70199383 | 70199308 | ID=cds.MS.gene93910.t1;Parent=MS.gene93910.t1 |
| chr4.4 | exon | 70198913 | 70199121 | 70198913 | ID=MS.gene93910.t1.exon4;Parent=MS.gene93910.t1 |
| chr4.4 | CDS | 70198913 | 70199121 | 70198913 | ID=cds.MS.gene93910.t1;Parent=MS.gene93910.t1 |
| chr4.4 | exon | 70198728 | 70198836 | 70198728 | ID=MS.gene93910.t1.exon5;Parent=MS.gene93910.t1 |
| chr4.4 | CDS | 70198728 | 70198836 | 70198728 | ID=cds.MS.gene93910.t1;Parent=MS.gene93910.t1 |
| chr4.4 | exon | 70198265 | 70198357 | 70198265 | ID=MS.gene93910.t1.exon6;Parent=MS.gene93910.t1 |
| chr4.4 | CDS | 70198265 | 70198357 | 70198265 | ID=cds.MS.gene93910.t1;Parent=MS.gene93910.t1 |
| chr4.4 | exon | 70197098 | 70197258 | 70197098 | ID=MS.gene93910.t1.exon7;Parent=MS.gene93910.t1 |
| chr4.4 | CDS | 70197098 | 70197258 | 70197098 | ID=cds.MS.gene93910.t1;Parent=MS.gene93910.t1 |
| chr4.4 | exon | 70195891 | 70196442 | 70195891 | ID=MS.gene93910.t1.exon8;Parent=MS.gene93910.t1 |
| chr4.4 | CDS | 70195891 | 70196442 | 70195891 | ID=cds.MS.gene93910.t1;Parent=MS.gene93910.t1 |
| Gene Sequence |
| Protein sequence |
