Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94244.t1 | XP_003623150.1 | 98.1 | 320 | 6 | 0 | 1 | 320 | 1 | 320 | 8.20E-178 | 632.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94244.t1 | Q54MZ4 | 39.9 | 303 | 164 | 6 | 25 | 319 | 142 | 434 | 5.8e-55 | 216.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94244.t1 | G7L5K1 | 98.1 | 320 | 6 | 0 | 1 | 320 | 1 | 320 | 5.9e-178 | 632.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene94244 | 0.806595 | 7.62E-50 | -1.69E-46 |
| MS.gene049343 | MS.gene94244 | 0.809707 | 1.66E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene94244 | 0.817538 | 3.13E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene94244 | 0.806672 | 7.34E-50 | -1.69E-46 |
| MS.gene049873 | MS.gene94244 | 0.805814 | 1.11E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene94244 | 0.810269 | 1.25E-50 | -1.69E-46 |
| MS.gene050355 | MS.gene94244 | 0.815643 | 8.32E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene94244 | 0.807702 | 4.44E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene94244 | 0.806497 | 7.99E-50 | -1.69E-46 |
| MS.gene050724 | MS.gene94244 | 0.803109 | 4.08E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene94244 | 0.81934 | 1.22E-52 | -1.69E-46 |
| MS.gene052208 | MS.gene94244 | 0.829242 | 5.74E-55 | -1.69E-46 |
| MS.gene052333 | MS.gene94244 | 0.826754 | 2.28E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene94244 | 0.815255 | 1.02E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene94244 | 0.836343 | 9.89E-57 | -1.69E-46 |
| MS.gene052584 | MS.gene94244 | 0.84332 | 1.51E-58 | -1.69E-46 |
| MS.gene052586 | MS.gene94244 | 0.825206 | 5.32E-54 | -1.69E-46 |
| MS.gene052867 | MS.gene94244 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene053006 | MS.gene94244 | 0.823961 | 1.04E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene94244 | 0.83925 | 1.77E-57 | -1.69E-46 |
| MS.gene05414 | MS.gene94244 | 0.817059 | 4.01E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene94244 | 0.815333 | 9.75E-52 | -1.69E-46 |
| MS.gene054291 | MS.gene94244 | -0.832246 | 1.05E-55 | -1.69E-46 |
| MS.gene055166 | MS.gene94244 | 0.880777 | 4.15E-70 | -1.69E-46 |
| MS.gene055222 | MS.gene94244 | 0.817719 | 2.85E-52 | -1.69E-46 |
| MS.gene055586 | MS.gene94244 | 0.818821 | 1.60E-52 | -1.69E-46 |
| MS.gene055589 | MS.gene94244 | 0.812695 | 3.72E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene94244 | 0.829417 | 5.21E-55 | -1.69E-46 |
| MS.gene055818 | MS.gene94244 | 0.805017 | 1.64E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene94244 | 0.852003 | 6.14E-61 | -1.69E-46 |
| MS.gene057026 | MS.gene94244 | 0.814175 | 1.76E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene94244 | 0.813425 | 2.58E-51 | -1.69E-46 |
| MS.gene057314 | MS.gene94244 | 0.808925 | 2.44E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene94244 | 0.801077 | 1.07E-48 | -1.69E-46 |
| MS.gene058548 | MS.gene94244 | 0.800348 | 1.50E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene94244 | 0.81286 | 3.43E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene94244 | 0.83021 | 3.34E-55 | -1.69E-46 |
| MS.gene059935 | MS.gene94244 | 0.801706 | 7.93E-49 | -1.69E-46 |
| MS.gene060521 | MS.gene94244 | 0.805617 | 1.22E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene94244 | 0.800626 | 1.32E-48 | -1.69E-46 |
| MS.gene060879 | MS.gene94244 | 0.807586 | 4.70E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene94244 | -0.831148 | 1.97E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94244.t1 | MTR_7g064980 | 98.125 | 320 | 6 | 0 | 1 | 320 | 1 | 320 | 0.0 | 644 |
| MS.gene94244.t1 | MTR_5g081150 | 69.279 | 319 | 91 | 3 | 1 | 315 | 7 | 322 | 6.18e-151 | 427 |
| MS.gene94244.t1 | MTR_5g081150 | 62.598 | 254 | 88 | 3 | 1 | 250 | 7 | 257 | 4.38e-100 | 295 |
| MS.gene94244.t1 | MTR_5g081150 | 64.082 | 245 | 81 | 3 | 1 | 241 | 7 | 248 | 9.60e-100 | 294 |
| MS.gene94244.t1 | MTR_5g009500 | 36.859 | 312 | 164 | 7 | 25 | 314 | 38 | 338 | 3.22e-56 | 186 |
| MS.gene94244.t1 | MTR_8g027975 | 34.839 | 310 | 175 | 6 | 25 | 314 | 51 | 353 | 8.83e-56 | 185 |
| MS.gene94244.t1 | MTR_6g091800 | 33.550 | 307 | 172 | 5 | 23 | 314 | 17 | 306 | 3.48e-50 | 169 |
| MS.gene94244.t1 | MTR_6g091800 | 31.515 | 330 | 170 | 5 | 24 | 314 | 18 | 330 | 2.34e-47 | 162 |
| MS.gene94244.t1 | MTR_4g119770 | 32.278 | 316 | 184 | 8 | 27 | 316 | 16 | 327 | 2.89e-47 | 162 |
| MS.gene94244.t1 | MTR_4g119770 | 26.108 | 203 | 126 | 5 | 136 | 318 | 16 | 214 | 9.17e-17 | 80.1 |
| MS.gene94244.t1 | MTR_1g012030 | 33.898 | 295 | 175 | 6 | 21 | 314 | 135 | 410 | 3.91e-47 | 164 |
| MS.gene94244.t1 | MTR_1g012030 | 26.733 | 202 | 127 | 6 | 15 | 212 | 223 | 407 | 8.36e-15 | 75.1 |
| MS.gene94244.t1 | MTR_7g068340 | 33.449 | 287 | 167 | 6 | 36 | 320 | 98 | 362 | 1.12e-46 | 162 |
| MS.gene94244.t1 | MTR_3g104600 | 33.123 | 317 | 169 | 9 | 22 | 314 | 32 | 329 | 1.20e-46 | 160 |
| MS.gene94244.t1 | MTR_3g104600 | 26.778 | 239 | 141 | 10 | 11 | 228 | 116 | 341 | 3.74e-12 | 66.6 |
| MS.gene94244.t1 | MTR_3g098460 | 31.329 | 316 | 190 | 8 | 7 | 315 | 186 | 481 | 5.11e-46 | 162 |
| MS.gene94244.t1 | MTR_3g098460 | 29.565 | 230 | 142 | 7 | 98 | 317 | 165 | 384 | 4.13e-22 | 96.7 |
| MS.gene94244.t1 | MTR_3g107510 | 33.898 | 295 | 175 | 7 | 21 | 314 | 118 | 393 | 9.49e-46 | 160 |
| MS.gene94244.t1 | MTR_3g107510 | 26.961 | 204 | 128 | 5 | 15 | 214 | 206 | 392 | 1.96e-18 | 85.5 |
| MS.gene94244.t1 | MTR_7g084400 | 33.221 | 298 | 168 | 7 | 25 | 315 | 213 | 486 | 1.17e-45 | 161 |
| MS.gene94244.t1 | MTR_7g084400 | 31.000 | 200 | 124 | 5 | 14 | 213 | 298 | 483 | 1.55e-22 | 98.2 |
| MS.gene94244.t1 | MTR_7g084400 | 28.947 | 228 | 148 | 4 | 98 | 317 | 173 | 394 | 8.32e-20 | 90.1 |
| MS.gene94244.t1 | MTR_8g096050 | 32.781 | 302 | 167 | 7 | 25 | 315 | 227 | 503 | 2.69e-45 | 161 |
| MS.gene94244.t1 | MTR_8g096050 | 30.594 | 219 | 127 | 5 | 1 | 213 | 301 | 500 | 1.60e-23 | 100 |
| MS.gene94244.t1 | MTR_8g096050 | 28.634 | 227 | 148 | 5 | 98 | 317 | 187 | 406 | 1.03e-20 | 92.8 |
| MS.gene94244.t1 | MTR_4g114320 | 32.698 | 315 | 188 | 8 | 4 | 314 | 100 | 394 | 4.20e-44 | 155 |
| MS.gene94244.t1 | MTR_2g436930 | 31.546 | 317 | 183 | 10 | 27 | 316 | 17 | 326 | 3.92e-43 | 151 |
| MS.gene94244.t1 | MTR_6g091800 | 35.081 | 248 | 129 | 5 | 23 | 255 | 17 | 247 | 5.92e-42 | 146 |
| MS.gene94244.t1 | MTR_6g091800 | 28.947 | 190 | 123 | 3 | 133 | 311 | 18 | 206 | 2.63e-19 | 86.3 |
| MS.gene94244.t1 | MTR_6g091800 | 35.081 | 248 | 129 | 5 | 23 | 255 | 17 | 247 | 6.38e-42 | 146 |
| MS.gene94244.t1 | MTR_6g091800 | 28.947 | 190 | 123 | 3 | 133 | 311 | 18 | 206 | 3.95e-19 | 85.9 |
| MS.gene94244.t1 | MTR_6g091800 | 30.449 | 312 | 161 | 5 | 24 | 296 | 18 | 312 | 4.44e-41 | 145 |
| MS.gene94244.t1 | MTR_4g016730 | 33.803 | 284 | 163 | 8 | 36 | 318 | 100 | 359 | 1.97e-40 | 145 |
| MS.gene94244.t1 | MTR_6g091800 | 32.472 | 271 | 127 | 5 | 24 | 255 | 18 | 271 | 5.64e-39 | 139 |
| MS.gene94244.t1 | MTR_6g091800 | 32.472 | 271 | 127 | 5 | 24 | 255 | 18 | 271 | 6.67e-39 | 139 |
| MS.gene94244.t1 | MTR_6g092210 | 32.400 | 250 | 151 | 4 | 74 | 314 | 6 | 246 | 4.87e-37 | 133 |
| MS.gene94244.t1 | MTR_6g092210 | 29.252 | 147 | 98 | 3 | 170 | 311 | 1 | 146 | 1.00e-14 | 73.2 |
| MS.gene94244.t1 | MTR_6g034145 | 31.641 | 256 | 151 | 4 | 74 | 314 | 6 | 252 | 1.35e-36 | 132 |
| MS.gene94244.t1 | MTR_6g034145 | 30.065 | 153 | 95 | 3 | 170 | 311 | 1 | 152 | 9.63e-15 | 73.2 |
| MS.gene94244.t1 | MTR_4g119770 | 31.048 | 248 | 150 | 5 | 27 | 256 | 16 | 260 | 3.55e-33 | 123 |
| MS.gene94244.t1 | MTR_4g119770 | 26.108 | 203 | 126 | 5 | 136 | 318 | 16 | 214 | 3.67e-17 | 80.1 |
| MS.gene94244.t1 | MTR_3g104500 | 29.097 | 299 | 196 | 7 | 24 | 315 | 33 | 322 | 1.05e-32 | 124 |
| MS.gene94244.t1 | MTR_8g090210 | 27.660 | 329 | 196 | 6 | 6 | 314 | 91 | 397 | 7.97e-32 | 123 |
| MS.gene94244.t1 | MTR_3g074490 | 28.485 | 330 | 189 | 8 | 5 | 314 | 101 | 403 | 2.46e-30 | 119 |
| MS.gene94244.t1 | MTR_2g436930 | 30.672 | 238 | 143 | 7 | 97 | 316 | 3 | 236 | 4.22e-28 | 109 |
| MS.gene94244.t1 | MTR_2g436930 | 29.870 | 154 | 93 | 4 | 76 | 215 | 81 | 233 | 1.07e-11 | 64.3 |
| MS.gene94244.t1 | MTR_7g109135 | 28.956 | 297 | 194 | 7 | 27 | 317 | 24 | 309 | 2.67e-27 | 109 |
| MS.gene94244.t1 | MTR_7g109135 | 38.202 | 89 | 52 | 2 | 230 | 316 | 23 | 110 | 2.48e-11 | 63.9 |
| MS.gene94244.t1 | MTR_7g109135 | 27.225 | 191 | 128 | 4 | 39 | 227 | 137 | 318 | 3.10e-11 | 63.5 |
| MS.gene94244.t1 | MTR_4g005330 | 25.325 | 308 | 198 | 6 | 22 | 314 | 63 | 353 | 4.26e-27 | 109 |
| MS.gene94244.t1 | MTR_4g005330 | 25.329 | 304 | 195 | 6 | 26 | 314 | 1 | 287 | 1.18e-26 | 107 |
| MS.gene94244.t1 | MTR_5g055410 | 29.655 | 290 | 177 | 8 | 37 | 315 | 33 | 306 | 2.57e-26 | 107 |
| MS.gene94244.t1 | MTR_5g055410 | 27.604 | 192 | 119 | 6 | 39 | 222 | 133 | 312 | 7.00e-12 | 65.9 |
| MS.gene94244.t1 | MTR_6g091800 | 33.702 | 181 | 94 | 3 | 23 | 190 | 17 | 184 | 2.22e-25 | 100 |
| MS.gene94244.t1 | MTR_6g091800 | 28.571 | 168 | 108 | 3 | 133 | 289 | 18 | 184 | 7.49e-15 | 72.0 |
| MS.gene94244.t1 | MTR_7g084400 | 31.364 | 220 | 127 | 6 | 25 | 237 | 207 | 409 | 1.53e-24 | 103 |
| MS.gene94244.t1 | MTR_7g084400 | 28.947 | 228 | 148 | 4 | 98 | 317 | 167 | 388 | 7.71e-20 | 89.7 |
| MS.gene94244.t1 | MTR_8g107270 | 26.948 | 308 | 200 | 10 | 23 | 319 | 16 | 309 | 4.54e-24 | 100 |
| MS.gene94244.t1 | MTR_3g028590 | 28.618 | 304 | 192 | 8 | 22 | 314 | 90 | 379 | 4.75e-24 | 101 |
| MS.gene94244.t1 | MTR_3g028590 | 28.618 | 304 | 192 | 8 | 22 | 314 | 94 | 383 | 5.32e-24 | 101 |
| MS.gene94244.t1 | MTR_8g036880 | 28.053 | 303 | 192 | 8 | 24 | 314 | 101 | 389 | 1.53e-23 | 100 |
| MS.gene94244.t1 | MTR_6g091800 | 38.732 | 142 | 74 | 2 | 24 | 165 | 18 | 146 | 1.92e-23 | 96.3 |
| MS.gene94244.t1 | MTR_6g091800 | 30.328 | 122 | 84 | 1 | 133 | 253 | 18 | 139 | 1.43e-11 | 63.5 |
| MS.gene94244.t1 | MTR_7g109135 | 28.231 | 294 | 193 | 7 | 27 | 317 | 24 | 302 | 4.10e-23 | 97.4 |
| MS.gene94244.t1 | MTR_7g109135 | 38.202 | 89 | 52 | 2 | 230 | 316 | 23 | 110 | 2.56e-11 | 63.9 |
| MS.gene94244.t1 | MTR_8g098240 | 26.897 | 290 | 190 | 6 | 26 | 315 | 321 | 588 | 1.20e-22 | 98.6 |
| MS.gene94244.t1 | MTR_8g098240 | 28.342 | 187 | 119 | 4 | 133 | 316 | 319 | 493 | 5.46e-13 | 69.7 |
| MS.gene94244.t1 | MTR_2g098070 | 27.885 | 312 | 200 | 8 | 14 | 314 | 55 | 352 | 1.45e-22 | 97.1 |
| MS.gene94244.t1 | MTR_3g025800 | 27.187 | 320 | 185 | 11 | 24 | 312 | 27 | 329 | 4.16e-22 | 95.5 |
| MS.gene94244.t1 | MTR_3g025800 | 23.645 | 203 | 135 | 2 | 130 | 312 | 24 | 226 | 2.50e-13 | 70.1 |
| MS.gene94244.t1 | MTR_7g109135 | 29.289 | 239 | 155 | 6 | 85 | 317 | 1 | 231 | 1.24e-21 | 92.0 |
| MS.gene94244.t1 | MTR_7g117030 | 28.517 | 263 | 163 | 7 | 75 | 319 | 85 | 340 | 1.51e-21 | 94.0 |
| MS.gene94244.t1 | MTR_5g073040 | 26.421 | 299 | 200 | 4 | 25 | 320 | 39 | 320 | 2.59e-21 | 92.8 |
| MS.gene94244.t1 | MTR_4g078545 | 27.653 | 311 | 200 | 8 | 15 | 314 | 65 | 361 | 3.88e-21 | 92.8 |
| MS.gene94244.t1 | MTR_1g087840 | 29.032 | 248 | 161 | 6 | 75 | 316 | 67 | 305 | 7.28e-21 | 91.3 |
| MS.gene94244.t1 | MTR_1g087840 | 28.251 | 223 | 148 | 5 | 3 | 222 | 97 | 310 | 1.82e-12 | 67.4 |
| MS.gene94244.t1 | MTR_1g087840 | 29.167 | 168 | 111 | 3 | 150 | 311 | 35 | 200 | 1.48e-11 | 64.7 |
| MS.gene94244.t1 | MTR_6g091910 | 29.744 | 195 | 120 | 4 | 133 | 314 | 18 | 208 | 1.43e-20 | 88.6 |
| MS.gene94244.t1 | MTR_6g091910 | 27.488 | 211 | 134 | 6 | 23 | 224 | 17 | 217 | 2.91e-18 | 82.4 |
| MS.gene94244.t1 | MTR_7g066690 | 24.038 | 312 | 218 | 7 | 14 | 319 | 6 | 304 | 3.76e-20 | 89.4 |
| MS.gene94244.t1 | MTR_3g090820 | 26.316 | 266 | 168 | 5 | 75 | 319 | 134 | 392 | 7.14e-20 | 89.7 |
| MS.gene94244.t1 | MTR_4g018750 | 25.503 | 298 | 199 | 8 | 30 | 319 | 20 | 302 | 1.26e-19 | 87.8 |
| MS.gene94244.t1 | MTR_8g076760 | 32.323 | 198 | 118 | 5 | 132 | 315 | 111 | 306 | 2.19e-19 | 87.4 |
| MS.gene94244.t1 | MTR_8g076760 | 32.768 | 177 | 113 | 3 | 148 | 320 | 28 | 202 | 1.96e-18 | 84.7 |
| MS.gene94244.t1 | MTR_7g109135 | 29.032 | 217 | 140 | 6 | 107 | 317 | 2 | 210 | 5.99e-19 | 84.3 |
| MS.gene94244.t1 | MTR_7g109135 | 27.225 | 191 | 128 | 4 | 39 | 227 | 38 | 219 | 1.58e-11 | 63.5 |
| MS.gene94244.t1 | MTR_1g090330 | 23.226 | 310 | 208 | 6 | 21 | 317 | 10 | 302 | 6.42e-19 | 85.9 |
| MS.gene94244.t1 | MTR_4g057850 | 24.752 | 303 | 198 | 11 | 13 | 304 | 10 | 293 | 1.01e-18 | 85.5 |
| MS.gene94244.t1 | MTR_4g057850 | 27.957 | 186 | 130 | 4 | 131 | 314 | 19 | 202 | 9.03e-13 | 68.2 |
| MS.gene94244.t1 | MTR_1g097890 | 27.350 | 234 | 156 | 3 | 82 | 315 | 86 | 305 | 1.61e-18 | 84.7 |
| MS.gene94244.t1 | MTR_1g097890 | 28.814 | 177 | 104 | 4 | 135 | 311 | 52 | 206 | 1.42e-14 | 73.6 |
| MS.gene94244.t1 | MTR_6g034515 | 27.148 | 291 | 182 | 8 | 38 | 320 | 80 | 348 | 3.85e-18 | 84.3 |
| MS.gene94244.t1 | MTR_6g034515 | 27.711 | 166 | 110 | 4 | 146 | 311 | 79 | 234 | 3.01e-12 | 67.0 |
| MS.gene94244.t1 | MTR_4g012850 | 29.730 | 185 | 120 | 3 | 26 | 209 | 111 | 286 | 1.36e-16 | 79.3 |
| MS.gene94244.t1 | MTR_4g012850 | 29.891 | 184 | 123 | 4 | 133 | 314 | 15 | 194 | 1.94e-15 | 75.9 |
| MS.gene94244.t1 | MTR_2g102010 | 30.409 | 171 | 111 | 3 | 40 | 209 | 125 | 288 | 6.28e-16 | 77.4 |
| MS.gene94244.t1 | MTR_4g094578 | 27.174 | 184 | 118 | 4 | 132 | 308 | 27 | 201 | 2.05e-15 | 75.9 |
| MS.gene94244.t1 | MTR_3g462140 | 25.246 | 305 | 208 | 6 | 14 | 311 | 4 | 295 | 3.16e-15 | 75.1 |
| MS.gene94244.t1 | MTR_8g092080 | 26.360 | 239 | 154 | 5 | 82 | 316 | 87 | 307 | 7.20e-15 | 74.3 |
| MS.gene94244.t1 | MTR_8g092080 | 25.000 | 220 | 147 | 4 | 1 | 220 | 109 | 310 | 5.62e-13 | 68.9 |
| MS.gene94244.t1 | MTR_8g092080 | 28.261 | 184 | 106 | 4 | 130 | 311 | 48 | 207 | 2.97e-12 | 66.6 |
| MS.gene94244.t1 | MTR_7g015870 | 24.125 | 257 | 175 | 6 | 73 | 315 | 65 | 315 | 7.53e-15 | 74.3 |
| MS.gene94244.t1 | MTR_1g088995 | 24.211 | 285 | 201 | 6 | 29 | 313 | 37 | 306 | 3.10e-14 | 72.4 |
| MS.gene94244.t1 | MTR_1g088995 | 30.102 | 196 | 115 | 8 | 24 | 214 | 128 | 306 | 1.44e-11 | 64.7 |
| MS.gene94244.t1 | MTR_1g088995 | 26.316 | 209 | 122 | 8 | 120 | 314 | 19 | 209 | 9.84e-11 | 62.0 |
| MS.gene94244.t1 | MTR_6g015860 | 22.148 | 298 | 204 | 6 | 31 | 313 | 21 | 305 | 3.39e-14 | 72.4 |
| MS.gene94244.t1 | MTR_7g015870 | 23.735 | 257 | 176 | 6 | 73 | 315 | 61 | 311 | 4.88e-14 | 72.0 |
| MS.gene94244.t1 | MTR_5g030530 | 26.131 | 199 | 134 | 4 | 129 | 315 | 3 | 200 | 4.98e-14 | 71.6 |
| MS.gene94244.t1 | MTR_6g033280 | 27.907 | 172 | 112 | 5 | 147 | 314 | 76 | 239 | 1.31e-13 | 71.2 |
| MS.gene94244.t1 | MTR_8g019480 | 25.342 | 292 | 179 | 7 | 63 | 318 | 60 | 348 | 1.33e-13 | 70.9 |
| MS.gene94244.t1 | MTR_4g018750 | 25.106 | 235 | 160 | 6 | 27 | 253 | 17 | 243 | 1.88e-13 | 70.1 |
| MS.gene94244.t1 | MTR_8g066975 | 27.835 | 194 | 129 | 4 | 129 | 311 | 3 | 196 | 6.18e-13 | 68.6 |
| MS.gene94244.t1 | MTR_8g066975 | 24.759 | 311 | 204 | 10 | 19 | 314 | 1 | 296 | 4.62e-11 | 63.2 |
| MS.gene94244.t1 | MTR_5g081910 | 25.180 | 278 | 167 | 9 | 75 | 316 | 53 | 325 | 2.48e-12 | 67.0 |
| MS.gene94244.t1 | MTR_3g100570 | 22.257 | 319 | 217 | 9 | 22 | 317 | 3 | 313 | 3.50e-12 | 66.6 |
| MS.gene94244.t1 | MTR_8g099910 | 27.322 | 183 | 117 | 6 | 136 | 314 | 79 | 249 | 3.58e-12 | 66.6 |
| MS.gene94244.t1 | MTR_2g032610 | 31.818 | 154 | 94 | 6 | 143 | 288 | 37 | 187 | 8.22e-12 | 65.5 |
| MS.gene94244.t1 | MTR_2g032610 | 22.414 | 290 | 195 | 7 | 47 | 312 | 34 | 317 | 4.06e-11 | 63.5 |
| MS.gene94244.t1 | MTR_3g090820 | 25.123 | 203 | 126 | 4 | 75 | 256 | 134 | 331 | 3.51e-11 | 63.5 |
| MS.gene94244.t1 | MTR_5g032420 | 21.818 | 330 | 214 | 7 | 22 | 317 | 3 | 322 | 4.48e-11 | 63.2 |
| MS.gene94244.t1 | MTR_1g088995 | 26.316 | 209 | 122 | 8 | 120 | 314 | 19 | 209 | 5.22e-11 | 62.0 |
| MS.gene94244.t1 | MTR_8g076690 | 29.016 | 193 | 104 | 6 | 135 | 310 | 17 | 193 | 5.89e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94244.t1 | AT3G53940 | 71.246 | 313 | 84 | 3 | 6 | 316 | 54 | 362 | 4.76e-165 | 464 |
| MS.gene94244.t1 | AT3G53940 | 30.457 | 197 | 121 | 4 | 134 | 318 | 73 | 265 | 4.42e-17 | 81.3 |
| MS.gene94244.t1 | AT3G55640 | 70.227 | 309 | 88 | 2 | 4 | 311 | 17 | 322 | 2.02e-156 | 441 |
| MS.gene94244.t1 | AT3G55640 | 28.899 | 218 | 127 | 5 | 115 | 312 | 15 | 224 | 5.95e-16 | 77.8 |
| MS.gene94244.t1 | AT3G55640 | 27.000 | 200 | 124 | 4 | 24 | 217 | 144 | 327 | 1.49e-14 | 73.6 |
| MS.gene94244.t1 | AT3G55640 | 70.227 | 309 | 88 | 2 | 4 | 311 | 17 | 322 | 2.02e-156 | 441 |
| MS.gene94244.t1 | AT3G55640 | 28.899 | 218 | 127 | 5 | 115 | 312 | 15 | 224 | 5.95e-16 | 77.8 |
| MS.gene94244.t1 | AT3G55640 | 27.000 | 200 | 124 | 4 | 24 | 217 | 144 | 327 | 1.49e-14 | 73.6 |
| MS.gene94244.t1 | AT2G37890 | 62.236 | 331 | 107 | 4 | 1 | 316 | 7 | 334 | 1.71e-147 | 418 |
| MS.gene94244.t1 | AT2G37890 | 29.302 | 215 | 136 | 3 | 116 | 318 | 27 | 237 | 2.86e-18 | 84.3 |
| MS.gene94244.t1 | AT3G53940 | 67.647 | 238 | 71 | 3 | 6 | 241 | 54 | 287 | 1.03e-114 | 333 |
| MS.gene94244.t1 | AT3G53940 | 30.457 | 197 | 121 | 4 | 134 | 318 | 73 | 265 | 1.15e-17 | 82.0 |
| MS.gene94244.t1 | AT3G55640 | 67.364 | 239 | 74 | 2 | 4 | 241 | 17 | 252 | 3.89e-113 | 328 |
| MS.gene94244.t1 | AT3G55640 | 28.899 | 218 | 127 | 5 | 115 | 312 | 15 | 224 | 2.19e-16 | 77.8 |
| MS.gene94244.t1 | AT3G55640 | 67.364 | 239 | 74 | 2 | 4 | 241 | 17 | 252 | 3.89e-113 | 328 |
| MS.gene94244.t1 | AT3G55640 | 28.899 | 218 | 127 | 5 | 115 | 312 | 15 | 224 | 2.19e-16 | 77.8 |
| MS.gene94244.t1 | AT4G01100 | 35.484 | 310 | 173 | 7 | 25 | 314 | 42 | 344 | 2.82e-55 | 184 |
| MS.gene94244.t1 | AT4G01100 | 34.877 | 324 | 170 | 9 | 25 | 314 | 42 | 358 | 1.68e-54 | 182 |
| MS.gene94244.t1 | AT5G51050 | 36.677 | 319 | 166 | 9 | 7 | 315 | 204 | 496 | 4.46e-52 | 179 |
| MS.gene94244.t1 | AT5G51050 | 30.319 | 188 | 123 | 3 | 133 | 317 | 222 | 404 | 2.61e-18 | 85.9 |
| MS.gene94244.t1 | AT4G01100 | 34.783 | 299 | 168 | 7 | 36 | 314 | 3 | 294 | 1.10e-51 | 173 |
| MS.gene94244.t1 | AT4G32400 | 35.932 | 295 | 169 | 8 | 21 | 314 | 110 | 385 | 1.09e-46 | 162 |
| MS.gene94244.t1 | AT4G32400 | 29.412 | 204 | 119 | 5 | 15 | 212 | 198 | 382 | 6.55e-17 | 81.3 |
| MS.gene94244.t1 | AT4G32400 | 24.000 | 200 | 141 | 3 | 123 | 320 | 103 | 293 | 5.51e-14 | 72.4 |
| MS.gene94244.t1 | AT3G51870 | 33.798 | 287 | 166 | 7 | 36 | 320 | 102 | 366 | 1.79e-46 | 161 |
| MS.gene94244.t1 | AT4G26180 | 33.660 | 306 | 168 | 7 | 23 | 311 | 19 | 306 | 1.16e-45 | 158 |
| MS.gene94244.t1 | AT5G61810 | 32.268 | 313 | 183 | 6 | 7 | 315 | 46 | 333 | 1.37e-45 | 158 |
| MS.gene94244.t1 | AT5G61810 | 32.268 | 313 | 183 | 6 | 7 | 315 | 189 | 476 | 5.18e-44 | 157 |
| MS.gene94244.t1 | AT1G14560 | 33.000 | 300 | 163 | 8 | 36 | 314 | 38 | 320 | 1.81e-42 | 149 |
| MS.gene94244.t1 | AT1G14560 | 27.358 | 212 | 131 | 7 | 20 | 216 | 118 | 321 | 6.49e-16 | 77.8 |
| MS.gene94244.t1 | AT5G01500 | 31.690 | 284 | 172 | 6 | 36 | 318 | 130 | 392 | 5.99e-41 | 147 |
| MS.gene94244.t1 | AT3G21390 | 32.258 | 310 | 176 | 8 | 27 | 308 | 21 | 324 | 6.16e-41 | 145 |
| MS.gene94244.t1 | AT3G21390 | 26.368 | 201 | 128 | 4 | 136 | 320 | 21 | 217 | 6.65e-16 | 77.8 |
| MS.gene94244.t1 | AT4G26180 | 32.990 | 291 | 160 | 7 | 23 | 296 | 19 | 291 | 8.27e-41 | 144 |
| MS.gene94244.t1 | AT4G26180 | 29.630 | 189 | 123 | 2 | 133 | 311 | 20 | 208 | 1.41e-22 | 95.9 |
| MS.gene94244.t1 | AT3G21390 | 32.258 | 310 | 176 | 8 | 27 | 308 | 43 | 346 | 9.35e-41 | 145 |
| MS.gene94244.t1 | AT3G21390 | 26.368 | 201 | 128 | 4 | 136 | 320 | 43 | 239 | 8.08e-16 | 77.8 |
| MS.gene94244.t1 | AT5G64970 | 31.193 | 327 | 183 | 6 | 8 | 314 | 118 | 422 | 2.15e-39 | 144 |
| MS.gene94244.t1 | AT5G48970 | 31.546 | 317 | 186 | 10 | 27 | 316 | 24 | 336 | 2.66e-39 | 141 |
| MS.gene94244.t1 | AT5G07320 | 31.449 | 283 | 160 | 7 | 36 | 312 | 220 | 474 | 1.08e-38 | 143 |
| MS.gene94244.t1 | AT5G07320 | 31.792 | 173 | 109 | 4 | 146 | 317 | 221 | 385 | 3.32e-18 | 85.5 |
| MS.gene94244.t1 | AT5G07320 | 27.941 | 204 | 131 | 4 | 11 | 213 | 286 | 474 | 3.64e-18 | 85.1 |
| MS.gene94244.t1 | AT5G64970 | 30.844 | 308 | 171 | 6 | 28 | 315 | 14 | 299 | 2.50e-36 | 132 |
| MS.gene94244.t1 | AT1G14560 | 32.270 | 282 | 153 | 8 | 36 | 296 | 38 | 302 | 3.26e-36 | 132 |
| MS.gene94244.t1 | AT1G14560 | 29.775 | 178 | 113 | 4 | 146 | 311 | 39 | 216 | 2.03e-16 | 79.0 |
| MS.gene94244.t1 | AT5G64970 | 31.068 | 309 | 171 | 6 | 8 | 296 | 118 | 404 | 1.13e-34 | 130 |
| MS.gene94244.t1 | AT5G48970 | 31.599 | 269 | 159 | 8 | 69 | 316 | 1 | 265 | 1.31e-33 | 124 |
| MS.gene94244.t1 | AT5G56450 | 30.293 | 307 | 186 | 10 | 24 | 315 | 33 | 326 | 7.53e-33 | 124 |
| MS.gene94244.t1 | AT1G14560 | 34.783 | 230 | 120 | 7 | 106 | 314 | 2 | 222 | 1.54e-31 | 118 |
| MS.gene94244.t1 | AT1G14560 | 26.887 | 212 | 132 | 6 | 20 | 216 | 20 | 223 | 1.88e-16 | 77.8 |
| MS.gene94244.t1 | AT1G78180 | 30.284 | 317 | 179 | 8 | 19 | 315 | 122 | 416 | 4.22e-30 | 118 |
| MS.gene94244.t1 | AT1G25380 | 30.279 | 251 | 155 | 6 | 69 | 310 | 63 | 302 | 7.97e-29 | 114 |
| MS.gene94244.t1 | AT1G25380 | 25.000 | 220 | 152 | 5 | 9 | 224 | 105 | 315 | 9.25e-12 | 65.5 |
| MS.gene94244.t1 | AT1G25380 | 30.279 | 251 | 155 | 6 | 69 | 310 | 63 | 302 | 7.97e-29 | 114 |
| MS.gene94244.t1 | AT1G25380 | 25.000 | 220 | 152 | 5 | 9 | 224 | 105 | 315 | 9.25e-12 | 65.5 |
| MS.gene94244.t1 | AT3G20240 | 24.759 | 311 | 204 | 5 | 24 | 320 | 51 | 345 | 4.48e-28 | 112 |
| MS.gene94244.t1 | AT4G27940 | 28.788 | 264 | 163 | 6 | 75 | 319 | 155 | 412 | 1.65e-24 | 103 |
| MS.gene94244.t1 | AT4G11440 | 27.458 | 295 | 188 | 6 | 26 | 315 | 331 | 604 | 9.57e-24 | 102 |
| MS.gene94244.t1 | AT4G11440 | 27.458 | 295 | 188 | 6 | 26 | 315 | 331 | 604 | 9.57e-24 | 102 |
| MS.gene94244.t1 | AT4G28390 | 28.155 | 309 | 197 | 8 | 14 | 311 | 72 | 366 | 1.03e-23 | 100 |
| MS.gene94244.t1 | AT4G28390 | 28.155 | 309 | 197 | 8 | 14 | 311 | 72 | 366 | 1.03e-23 | 100 |
| MS.gene94244.t1 | AT3G08580 | 27.740 | 292 | 186 | 7 | 24 | 303 | 83 | 361 | 1.94e-23 | 99.8 |
| MS.gene94244.t1 | AT3G08580 | 27.740 | 292 | 186 | 7 | 24 | 303 | 83 | 361 | 1.94e-23 | 99.8 |
| MS.gene94244.t1 | AT2G30160 | 25.559 | 313 | 209 | 5 | 11 | 316 | 28 | 323 | 2.28e-23 | 98.6 |
| MS.gene94244.t1 | AT5G13490 | 27.055 | 292 | 188 | 7 | 24 | 303 | 87 | 365 | 1.66e-22 | 97.1 |
| MS.gene94244.t1 | AT5G13490 | 27.055 | 292 | 188 | 7 | 24 | 303 | 87 | 365 | 1.66e-22 | 97.1 |
| MS.gene94244.t1 | AT1G07030 | 27.815 | 302 | 187 | 7 | 25 | 317 | 40 | 319 | 2.64e-22 | 95.5 |
| MS.gene94244.t1 | AT1G07030 | 30.769 | 156 | 102 | 2 | 74 | 225 | 173 | 326 | 1.96e-12 | 67.4 |
| MS.gene94244.t1 | AT1G34065 | 30.279 | 251 | 151 | 5 | 77 | 320 | 101 | 334 | 1.02e-21 | 94.4 |
| MS.gene94244.t1 | AT1G34065 | 29.891 | 184 | 103 | 3 | 130 | 311 | 71 | 230 | 5.52e-16 | 77.8 |
| MS.gene94244.t1 | AT1G34065 | 26.126 | 222 | 138 | 5 | 8 | 225 | 139 | 338 | 1.16e-12 | 68.2 |
| MS.gene94244.t1 | AT1G34065 | 30.279 | 251 | 151 | 5 | 77 | 320 | 108 | 341 | 1.14e-21 | 94.4 |
| MS.gene94244.t1 | AT1G34065 | 29.891 | 184 | 103 | 3 | 130 | 311 | 78 | 237 | 5.41e-16 | 78.2 |
| MS.gene94244.t1 | AT1G34065 | 26.126 | 222 | 138 | 5 | 8 | 225 | 146 | 345 | 1.40e-12 | 68.2 |
| MS.gene94244.t1 | AT2G47490 | 27.083 | 288 | 190 | 9 | 37 | 317 | 29 | 303 | 2.16e-20 | 90.1 |
| MS.gene94244.t1 | AT2G47490 | 29.082 | 196 | 118 | 6 | 39 | 227 | 131 | 312 | 6.81e-12 | 65.9 |
| MS.gene94244.t1 | AT5G17400 | 27.336 | 289 | 192 | 7 | 23 | 303 | 12 | 290 | 3.76e-20 | 89.4 |
| MS.gene94244.t1 | AT5G01340 | 23.718 | 312 | 209 | 10 | 13 | 313 | 5 | 298 | 1.23e-18 | 85.1 |
| MS.gene94244.t1 | AT1G74240 | 27.215 | 316 | 187 | 11 | 24 | 312 | 35 | 334 | 3.80e-18 | 84.3 |
| MS.gene94244.t1 | AT1G74240 | 24.020 | 204 | 135 | 3 | 130 | 313 | 32 | 235 | 4.44e-12 | 66.6 |
| MS.gene94244.t1 | AT2G46320 | 26.792 | 265 | 163 | 7 | 75 | 320 | 109 | 361 | 4.08e-18 | 84.3 |
| MS.gene94244.t1 | AT3G54110 | 24.913 | 289 | 196 | 7 | 31 | 312 | 21 | 295 | 7.25e-18 | 82.8 |
| MS.gene94244.t1 | AT1G14140 | 24.290 | 317 | 209 | 10 | 8 | 313 | 3 | 299 | 8.45e-18 | 82.8 |
| MS.gene94244.t1 | AT1G14140 | 38.554 | 83 | 51 | 0 | 232 | 314 | 19 | 101 | 9.61e-11 | 62.4 |
| MS.gene94244.t1 | AT5G66380 | 29.500 | 200 | 134 | 4 | 126 | 320 | 2 | 199 | 7.25e-17 | 80.1 |
| MS.gene94244.t1 | AT5G66380 | 31.068 | 206 | 116 | 7 | 132 | 319 | 108 | 305 | 1.88e-16 | 79.0 |
| MS.gene94244.t1 | AT2G46320 | 26.820 | 261 | 160 | 7 | 79 | 320 | 14 | 262 | 7.70e-17 | 79.3 |
| MS.gene94244.t1 | AT2G46320 | 26.820 | 261 | 160 | 7 | 79 | 320 | 14 | 262 | 7.70e-17 | 79.3 |
| MS.gene94244.t1 | AT2G46320 | 26.820 | 261 | 160 | 7 | 79 | 320 | 14 | 262 | 7.70e-17 | 79.3 |
| MS.gene94244.t1 | AT5G58970 | 23.701 | 308 | 204 | 7 | 18 | 313 | 9 | 297 | 3.44e-16 | 78.2 |
| MS.gene94244.t1 | AT4G03115 | 21.975 | 314 | 222 | 7 | 4 | 313 | 14 | 308 | 6.05e-15 | 74.7 |
| MS.gene94244.t1 | AT1G79900 | 28.934 | 197 | 120 | 6 | 28 | 221 | 112 | 291 | 8.30e-15 | 73.9 |
| MS.gene94244.t1 | AT4G03115 | 21.975 | 314 | 222 | 7 | 4 | 313 | 46 | 340 | 8.31e-15 | 74.7 |
| MS.gene94244.t1 | AT4G39460 | 30.055 | 183 | 102 | 3 | 130 | 310 | 54 | 212 | 1.98e-14 | 73.2 |
| MS.gene94244.t1 | AT4G39460 | 27.311 | 238 | 151 | 6 | 82 | 315 | 93 | 312 | 4.08e-14 | 72.4 |
| MS.gene94244.t1 | AT4G39460 | 26.147 | 218 | 135 | 6 | 8 | 221 | 122 | 317 | 6.86e-14 | 71.6 |
| MS.gene94244.t1 | AT4G39460 | 30.055 | 183 | 102 | 3 | 130 | 310 | 54 | 212 | 1.98e-14 | 73.2 |
| MS.gene94244.t1 | AT4G39460 | 27.311 | 238 | 151 | 6 | 82 | 315 | 93 | 312 | 4.08e-14 | 72.4 |
| MS.gene94244.t1 | AT4G39460 | 26.147 | 218 | 135 | 6 | 8 | 221 | 122 | 317 | 6.86e-14 | 71.6 |
| MS.gene94244.t1 | AT4G39460 | 30.055 | 183 | 102 | 3 | 130 | 310 | 54 | 212 | 1.98e-14 | 73.2 |
| MS.gene94244.t1 | AT4G39460 | 27.311 | 238 | 151 | 6 | 82 | 315 | 93 | 312 | 4.08e-14 | 72.4 |
| MS.gene94244.t1 | AT4G39460 | 26.147 | 218 | 135 | 6 | 8 | 221 | 122 | 317 | 6.86e-14 | 71.6 |
| MS.gene94244.t1 | AT5G42130 | 26.190 | 252 | 169 | 5 | 75 | 320 | 160 | 400 | 2.04e-14 | 73.9 |
| MS.gene94244.t1 | AT2G17270 | 25.000 | 172 | 121 | 2 | 137 | 308 | 25 | 188 | 2.38e-14 | 72.8 |
| MS.gene94244.t1 | AT1G74240 | 26.277 | 274 | 164 | 9 | 66 | 312 | 24 | 286 | 6.40e-14 | 71.6 |
| MS.gene94244.t1 | AT3G48850 | 27.717 | 184 | 121 | 4 | 135 | 314 | 72 | 247 | 6.51e-14 | 72.0 |
| MS.gene94244.t1 | AT5G46800 | 26.136 | 264 | 168 | 7 | 67 | 314 | 47 | 299 | 9.69e-14 | 70.9 |
| MS.gene94244.t1 | AT5G46800 | 26.136 | 264 | 168 | 7 | 67 | 314 | 47 | 299 | 9.69e-14 | 70.9 |
| MS.gene94244.t1 | AT5G46800 | 26.136 | 264 | 168 | 7 | 67 | 314 | 47 | 299 | 9.69e-14 | 70.9 |
| MS.gene94244.t1 | AT4G03115 | 21.339 | 239 | 176 | 3 | 75 | 313 | 19 | 245 | 2.36e-13 | 69.3 |
| MS.gene94244.t1 | AT4G03115 | 24.742 | 194 | 125 | 3 | 24 | 214 | 70 | 245 | 3.42e-11 | 62.8 |
| MS.gene94244.t1 | AT4G03115 | 21.339 | 239 | 176 | 3 | 75 | 313 | 11 | 237 | 2.37e-13 | 68.9 |
| MS.gene94244.t1 | AT4G03115 | 24.742 | 194 | 125 | 3 | 24 | 214 | 62 | 237 | 3.28e-11 | 62.8 |
| MS.gene94244.t1 | AT5G26200 | 24.627 | 268 | 172 | 7 | 76 | 318 | 79 | 341 | 3.24e-13 | 69.7 |
| MS.gene94244.t1 | AT5G15640 | 24.809 | 262 | 159 | 9 | 76 | 313 | 71 | 318 | 1.06e-12 | 68.2 |
| MS.gene94244.t1 | AT2G35800 | 23.129 | 294 | 197 | 6 | 26 | 319 | 546 | 810 | 1.09e-12 | 69.3 |
| MS.gene94244.t1 | AT5G15640 | 27.273 | 198 | 120 | 7 | 135 | 313 | 119 | 311 | 1.21e-12 | 67.8 |
| MS.gene94244.t1 | AT2G33820 | 24.468 | 188 | 134 | 4 | 131 | 311 | 15 | 201 | 1.34e-12 | 67.8 |
| MS.gene94244.t1 | AT2G33820 | 24.468 | 188 | 134 | 4 | 131 | 311 | 15 | 201 | 1.56e-12 | 67.0 |
| MS.gene94244.t1 | AT2G22500 | 23.975 | 317 | 202 | 11 | 28 | 318 | 9 | 312 | 5.28e-12 | 65.9 |
| MS.gene94244.t1 | AT2G26360 | 23.529 | 289 | 193 | 6 | 26 | 314 | 116 | 376 | 6.79e-12 | 66.2 |
| MS.gene94244.t1 | AT5G14040 | 27.749 | 191 | 122 | 5 | 131 | 317 | 83 | 261 | 1.05e-11 | 65.5 |
| MS.gene94244.t1 | AT2G46320 | 26.697 | 221 | 131 | 7 | 79 | 280 | 14 | 222 | 1.50e-11 | 63.5 |
| MS.gene94244.t1 | AT5G09470 | 24.747 | 198 | 140 | 3 | 22 | 219 | 148 | 336 | 4.54e-11 | 63.5 |
| MS.gene94244.t1 | AT2G33820 | 23.469 | 196 | 134 | 5 | 131 | 311 | 15 | 209 | 7.98e-11 | 62.4 |
Find 72 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGCTATTGCATTCTGTTC+TGG | 0.145852 | 7.3:+40950326 | MS.gene94244:intron |
| CTTGCTTGTGGAAGTCTTTC+GGG | 0.161989 | 7.3:+40951077 | MS.gene94244:CDS |
| AAGAAGGATTTAGAGCATTT+TGG | 0.183919 | 7.3:+40950127 | MS.gene94244:CDS |
| GGTGGTTTGGCTGGTGCTTT+TGG | 0.222835 | 7.3:+40948157 | MS.gene94244:CDS |
| TAGAAATTGACTGCAGAATA+AGG | 0.230373 | 7.3:-40950183 | None:intergenic |
| TCTTGCTTGTGGAAGTCTTT+CGG | 0.252979 | 7.3:+40951076 | MS.gene94244:CDS |
| TGCAGAGATGAAGGATTCTT+TGG | 0.285844 | 7.3:+40950708 | MS.gene94244:CDS |
| CAGCTATTGCATTCTGTTCT+GGG | 0.287641 | 7.3:+40950327 | MS.gene94244:intron |
| GTCTATAACACCAGTTTGTT+CGG | 0.316408 | 7.3:+40951736 | MS.gene94244:CDS |
| TACTAAATCCAAAGGATATA+AGG | 0.336341 | 7.3:-40950433 | None:intergenic |
| CATTTCCATTGGATCTTGTA+AGG | 0.350945 | 7.3:+40951674 | MS.gene94244:CDS |
| TTTGTCAGTGGTGGTTTGTC+AGG | 0.352435 | 7.3:+40950393 | MS.gene94244:CDS |
| ACCAGTTTGTTCGGGACATT+TGG | 0.356764 | 7.3:+40951745 | MS.gene94244:CDS |
| TGCCTCGGCCTTATATCCTT+TGG | 0.364990 | 7.3:+40950425 | MS.gene94244:CDS |
| TTTATTTGGTACAGGGTGTT+GGG | 0.368968 | 7.3:+40950850 | MS.gene94244:intron |
| AGGCGAAGGATGCAGTTAGA+AGG | 0.394424 | 7.3:+40951694 | MS.gene94244:CDS |
| CTTTATTTGGTACAGGGTGT+TGG | 0.407611 | 7.3:+40950849 | MS.gene94244:intron |
| GAGTACTACAAGGTTGTTCC+CGG | 0.420365 | 7.3:+40951820 | MS.gene94244:CDS |
| TCGGGCATTGTATCAGCAAC+AGG | 0.423302 | 7.3:+40951095 | MS.gene94244:CDS |
| TCTATAACACCAGTTTGTTC+GGG | 0.440219 | 7.3:+40951737 | MS.gene94244:CDS |
| GGTCACATATTTCGTAATGA+AGG | 0.441576 | 7.3:+40951766 | MS.gene94244:CDS |
| ACCACAATTTGCAGAGATGA+AGG | 0.444778 | 7.3:+40950699 | MS.gene94244:CDS |
| AATAATCAACAATCACAGAT+TGG | 0.462372 | 7.3:+40948112 | MS.gene94244:CDS |
| TACGTTGAGCCTCGTACAAA+AGG | 0.474022 | 7.3:-40950095 | None:intergenic |
| TTTGGAATGTACAAGGGACT+TGG | 0.480495 | 7.3:+40950726 | MS.gene94244:CDS |
| ACCATAGCATTTGAATCATC+CGG | 0.481287 | 7.3:-40951050 | None:intergenic |
| CAACGTATTGTCAAAGAAGA+AGG | 0.485056 | 7.3:+40950111 | MS.gene94244:CDS |
| GTCACATATTTCGTAATGAA+GGG | 0.495694 | 7.3:+40951767 | MS.gene94244:CDS |
| GACTTTGATAGCTGGAAAGA+AGG | 0.498891 | 7.3:-40951882 | None:intergenic |
| TGCAAATTGTGGTAAAAGCA+TGG | 0.499020 | 7.3:-40950689 | None:intergenic |
| ACTCGCAGCAACATTTCCAT+TGG | 0.506341 | 7.3:+40951663 | MS.gene94244:intron |
| AGCTATTGCATTCTGTTCTG+GGG | 0.509006 | 7.3:+40950328 | MS.gene94244:intron |
| TACAAGGTTGTTCCCGGCGT+CGG | 0.515767 | 7.3:+40951826 | MS.gene94244:CDS |
| GGGATACGAGGTTTGTATAG+AGG | 0.518603 | 7.3:+40951787 | MS.gene94244:CDS |
| AGAAATTGACTGCAGAATAA+GGG | 0.520568 | 7.3:-40950182 | None:intergenic |
| ACCAAATGTCCCGAACAAAC+TGG | 0.525065 | 7.3:-40951746 | None:intergenic |
| AGGATTCTTTGGAATGTACA+AGG | 0.526697 | 7.3:+40950719 | MS.gene94244:CDS |
| CTGCTAACGACTTTGATAGC+TGG | 0.529004 | 7.3:-40951890 | None:intergenic |
| AGAATGGGAACGGTGGTTGA+AGG | 0.534250 | 7.3:+40948073 | None:intergenic |
| GGCGAAGGATGCAGTTAGAA+GGG | 0.535534 | 7.3:+40951695 | MS.gene94244:CDS |
| AAGAACACGACTTGCAGCAC+AGG | 0.536771 | 7.3:+40950455 | MS.gene94244:CDS |
| GCCGGATGATTCAAATGCTA+TGG | 0.537566 | 7.3:+40951049 | MS.gene94244:CDS |
| GTCAGGTATGACAGCTGCCT+CGG | 0.538131 | 7.3:+40950410 | MS.gene94244:CDS |
| CATTGGATCTTGTAAGGCGA+AGG | 0.543797 | 7.3:+40951680 | MS.gene94244:CDS |
| GGGACTTGGTGCAACATTGT+TGG | 0.554068 | 7.3:+40950740 | MS.gene94244:CDS |
| GGGAACAACCTTGTAGTACT+CGG | 0.569629 | 7.3:-40951818 | None:intergenic |
| GCAAATTGTGGTAAAAGCAT+GGG | 0.570098 | 7.3:-40950688 | None:intergenic |
| TCCTTCATCTCTGCAAATTG+TGG | 0.571747 | 7.3:-40950700 | None:intergenic |
| AGAACGCAAGCTCTCGTAAG+CGG | 0.572360 | 7.3:-40950895 | None:intergenic |
| GAGAAATGTCATATACTACA+AGG | 0.573100 | 7.3:+40950659 | MS.gene94244:intron |
| CGTGTTCTTACTAAATCCAA+AGG | 0.576341 | 7.3:-40950441 | None:intergenic |
| GCTATTGCATTCTGTTCTGG+GGG | 0.579315 | 7.3:+40950329 | MS.gene94244:intron |
| CTTCGCCTTACAAGATCCAA+TGG | 0.583481 | 7.3:-40951679 | None:intergenic |
| ATGCAGTTAGAAGGGGTTGG+TGG | 0.587387 | 7.3:+40951703 | MS.gene94244:CDS |
| ACTTTGATAGCTGGAAAGAA+GGG | 0.587563 | 7.3:-40951881 | None:intergenic |
| TCTTAACTTTATCAGGTGCA+AGG | 0.588477 | 7.3:+40950027 | MS.gene94244:intron |
| AGAATGGTGAGTCTAGAAAG+AGG | 0.588606 | 7.3:-40948196 | None:intergenic |
| GTCTTTGTGCACTTTGTCAG+TGG | 0.597276 | 7.3:+40950381 | MS.gene94244:CDS |
| TCTTGCTCAGTGCTGTGACA+TGG | 0.598701 | 7.3:-40950068 | None:intergenic |
| TTTGTGCACTTTGTCAGTGG+TGG | 0.601534 | 7.3:+40950384 | MS.gene94244:CDS |
| GGAACAACCTTGTAGTACTC+GGG | 0.601730 | 7.3:-40951817 | None:intergenic |
| GAGAATCATAGAGCAAAGGC+TGG | 0.603864 | 7.3:+40950351 | MS.gene94244:CDS |
| ATCCAAAGGATATAAGGCCG+AGG | 0.606885 | 7.3:-40950427 | None:intergenic |
| GAGAAACTTAAAGCTATGCA+AGG | 0.615073 | 7.3:-40950873 | None:intergenic |
| GCGGTGTGTGAGAATGGGAA+CGG | 0.634844 | 7.3:+40948063 | None:intergenic |
| AGGATGCAGTTAGAAGGGGT+TGG | 0.644529 | 7.3:+40951700 | MS.gene94244:CDS |
| GCTATGGTCAGTCTTGCTTG+TGG | 0.645026 | 7.3:+40951065 | MS.gene94244:CDS |
| TTTCGTAATGAAGGGATACG+AGG | 0.650259 | 7.3:+40951775 | MS.gene94244:CDS |
| GGATTCTTTGGAATGTACAA+GGG | 0.652394 | 7.3:+40950720 | MS.gene94244:CDS |
| GCGAAGGATGCAGTTAGAAG+GGG | 0.654784 | 7.3:+40951696 | MS.gene94244:CDS |
| AGAAATGTCATATACTACAA+GGG | 0.672751 | 7.3:+40950660 | MS.gene94244:CDS |
| GTGTGTGAGAATGGGAACGG+TGG | 0.688037 | 7.3:+40948066 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTGTTTGATATTTATAT+GGG | + | chr7.3:40949535-40949554 | MS.gene94244:intron | 10.0% |
| !! | TTTATTGTTTGATATTTATA+TGG | + | chr7.3:40949534-40949553 | MS.gene94244:intron | 10.0% |
| !!! | TACATTTTAGTATTATAAAA+TGG | - | chr7.3:40949892-40949911 | None:intergenic | 10.0% |
| !!! | TATGGTTTTTTAAATAATTA+CGG | + | chr7.3:40951004-40951023 | MS.gene94244:intron | 10.0% |
| !!! | TTTCAATTTATTTCATTTTT+TGG | - | chr7.3:40948610-40948629 | None:intergenic | 10.0% |
| !! | AAAATTCCATTTCTATATTA+TGG | + | chr7.3:40949457-40949476 | MS.gene94244:intron | 15.0% |
| !! | AATTACAAGAAAAGAATAAA+AGG | - | chr7.3:40948233-40948252 | None:intergenic | 15.0% |
| !! | AATTTATCTGAATAACTTAT+GGG | + | chr7.3:40950004-40950023 | MS.gene94244:intron | 15.0% |
| !! | ATATTATCACATACTTTATT+TGG | + | chr7.3:40950836-40950855 | MS.gene94244:intron | 15.0% |
| !! | ATTAAATAATAAGCAATTCT+TGG | + | chr7.3:40950536-40950555 | MS.gene94244:intron | 15.0% |
| !!! | TCTATTTTATTTTTTGATTC+AGG | + | chr7.3:40951027-40951046 | MS.gene94244:intron | 15.0% |
| !!! | TGAATTTGATAACAAATTTT+AGG | + | chr7.3:40948729-40948748 | MS.gene94244:intron | 15.0% |
| !!! | TGATTTTATCATATTATTAG+CGG | - | chr7.3:40949134-40949153 | None:intergenic | 15.0% |
| !!! | TTTAAGTGATGTTTAATTTT+AGG | + | chr7.3:40948939-40948958 | MS.gene94244:intron | 15.0% |
| !! | AATATGCAGTAAACAATATA+AGG | + | chr7.3:40949327-40949346 | MS.gene94244:intron | 20.0% |
| !! | ATACTAAAATGTAATGTAAC+TGG | + | chr7.3:40949899-40949918 | MS.gene94244:intron | 20.0% |
| !! | ATTAAATGTAATGACATATG+CGG | - | chr7.3:40948317-40948336 | None:intergenic | 20.0% |
| !! | GAATAACCATAATATAGAAA+TGG | - | chr7.3:40949466-40949485 | None:intergenic | 20.0% |
| !! | GAATTTATCTGAATAACTTA+TGG | + | chr7.3:40950003-40950022 | MS.gene94244:intron | 20.0% |
| !! | TACTAAAATGTAATGTAACT+GGG | + | chr7.3:40949900-40949919 | MS.gene94244:intron | 20.0% |
| !! | TATATTGTTTACTGCATATT+TGG | - | chr7.3:40949327-40949346 | None:intergenic | 20.0% |
| !! | TATTTAATGCATACCATTAA+GGG | - | chr7.3:40950524-40950543 | None:intergenic | 20.0% |
| !! | TTATTTAATGCATACCATTA+AGG | - | chr7.3:40950525-40950544 | None:intergenic | 20.0% |
| !!! | ATAACAAATTTTAGGTTGAA+AGG | + | chr7.3:40948737-40948756 | MS.gene94244:intron | 20.0% |
| !!! | TCTATTTGATTTCAATCAAT+AGG | + | chr7.3:40949597-40949616 | MS.gene94244:intron | 20.0% |
| !!! | TTAGTGTGTATTTTGTTTTA+TGG | + | chr7.3:40948642-40948661 | MS.gene94244:intron | 20.0% |
| ! | AAAATTCAACCAACAAAAAG+TGG | - | chr7.3:40950487-40950506 | None:intergenic | 25.0% |
| ! | AATAATCAACAATCACAGAT+TGG | + | chr7.3:40948112-40948131 | MS.gene94244:CDS | 25.0% |
| ! | AGAAATGTCATATACTACAA+GGG | + | chr7.3:40950660-40950679 | MS.gene94244:CDS | 25.0% |
| ! | ATATTTGGATTCAACCTATT+TGG | - | chr7.3:40949312-40949331 | None:intergenic | 25.0% |
| ! | ATGAGATCAATTCAAACTTA+AGG | - | chr7.3:40950289-40950308 | None:intergenic | 25.0% |
| ! | ATTAAGTTTAAGTGTGTGAT+TGG | + | chr7.3:40948567-40948586 | MS.gene94244:intron | 25.0% |
| ! | CAAAATAAAGAAGCAATAAG+AGG | - | chr7.3:40950793-40950812 | None:intergenic | 25.0% |
| ! | CTATATTATGGTTATTCTGA+AGG | + | chr7.3:40949469-40949488 | MS.gene94244:intron | 25.0% |
| ! | CTTCATAGTCTTTAAACATA+CGG | - | chr7.3:40949076-40949095 | None:intergenic | 25.0% |
| ! | GAAAAAATATACTCACAAAC+AGG | - | chr7.3:40950603-40950622 | None:intergenic | 25.0% |
| ! | TAAGTTCAATGATTCACAAT+GGG | + | chr7.3:40949386-40949405 | MS.gene94244:intron | 25.0% |
| ! | TACTAAATCCAAAGGATATA+AGG | - | chr7.3:40950436-40950455 | None:intergenic | 25.0% |
| ! | TGGAAAATACATGATTTAGT+GGG | + | chr7.3:40949573-40949592 | MS.gene94244:intron | 25.0% |
| ! | TTAAATGTAATGACATATGC+GGG | - | chr7.3:40948316-40948335 | None:intergenic | 25.0% |
| ! | TTAAGTTTGAATTGATCTCA+TGG | + | chr7.3:40950288-40950307 | MS.gene94244:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | + | chr7.3:40949159-40949178 | MS.gene94244:intron | 25.0% |
| ! | TTGGAAAATACATGATTTAG+TGG | + | chr7.3:40949572-40949591 | MS.gene94244:intron | 25.0% |
| ! | TTGTAAAAATTGCTTGTGAT+TGG | + | chr7.3:40951436-40951455 | MS.gene94244:intron | 25.0% |
| ! | TTGTAATTTATGAAGCTATG+TGG | + | chr7.3:40948245-40948264 | MS.gene94244:intron | 25.0% |
| !! | ATTAGTTCTTACTTCTTAAG+AGG | + | chr7.3:40949361-40949380 | MS.gene94244:intron | 25.0% |
| !! | TAAGTGATGTTCAATTTTGA+AGG | + | chr7.3:40949261-40949280 | MS.gene94244:intron | 25.0% |
| !! | TTCTTTTTGCTTCATACATA+TGG | + | chr7.3:40950986-40951005 | MS.gene94244:intron | 25.0% |
| !!! | AAATTTTAGGTTGAAAGGTT+AGG | + | chr7.3:40948742-40948761 | MS.gene94244:intron | 25.0% |
| !!! | ATCAATAGGAGAGTTTTTTA+TGG | + | chr7.3:40949611-40949630 | MS.gene94244:intron | 25.0% |
| !!! | CAGTTTTGAAATATCATGTT+TGG | + | chr7.3:40948999-40949018 | MS.gene94244:intron | 25.0% |
| !!! | TTTTATTTTTTGATTCAGGC+CGG | + | chr7.3:40951031-40951050 | MS.gene94244:intron | 25.0% |
| AAAGGAAACCTGAAAAAGAA+TGG | - | chr7.3:40948215-40948234 | None:intergenic | 30.0% | |
| AACATGATGTGTTTCAAACA+TGG | - | chr7.3:40951568-40951587 | None:intergenic | 30.0% | |
| AACCAAGCTACAGAAATAAT+AGG | - | chr7.3:40949782-40949801 | None:intergenic | 30.0% | |
| ACATGATGTGTTTCAAACAT+GGG | - | chr7.3:40951567-40951586 | None:intergenic | 30.0% | |
| AGAAATTGACTGCAGAATAA+GGG | - | chr7.3:40950185-40950204 | None:intergenic | 30.0% | |
| ATGGGTCTCACTAAATTTAT+TGG | + | chr7.3:40949553-40949572 | MS.gene94244:intron | 30.0% | |
| CACAAACAAAAACAACTAGT+TGG | + | chr7.3:40951378-40951397 | MS.gene94244:intron | 30.0% | |
| CACACTTAAACTTAATTGTC+CGG | - | chr7.3:40948563-40948582 | None:intergenic | 30.0% | |
| GAGAAATGTCATATACTACA+AGG | + | chr7.3:40950659-40950678 | MS.gene94244:intron | 30.0% | |
| GGTTGAAAAGTTATGTTTGA+AGG | + | chr7.3:40948960-40948979 | MS.gene94244:intron | 30.0% | |
| GTAAGTACAATTCAGTTAGA+TGG | + | chr7.3:40948486-40948505 | MS.gene94244:intron | 30.0% | |
| GTAAGTTCAATGATTCACAA+TGG | + | chr7.3:40949385-40949404 | MS.gene94244:intron | 30.0% | |
| GTCACATATTTCGTAATGAA+GGG | + | chr7.3:40951767-40951786 | MS.gene94244:CDS | 30.0% | |
| TAGAAATTGACTGCAGAATA+AGG | - | chr7.3:40950186-40950205 | None:intergenic | 30.0% | |
| TATATGACATTTCTCTGCAT+TGG | - | chr7.3:40950654-40950673 | None:intergenic | 30.0% | |
| TATCAGTTGTAAGATAAAGC+AGG | - | chr7.3:40950819-40950838 | None:intergenic | 30.0% | |
| TATCATATTATTAGCGGTGT+CGG | - | chr7.3:40949128-40949147 | None:intergenic | 30.0% | |
| TATCCACATTAAAACCTTGT+TGG | + | chr7.3:40949957-40949976 | MS.gene94244:intron | 30.0% | |
| TCAGATAAATTCCAGTTGAA+CGG | - | chr7.3:40949995-40950014 | None:intergenic | 30.0% | |
| TGTTTAAAGACTATGAAGCA+CGG | + | chr7.3:40949078-40949097 | MS.gene94244:intron | 30.0% | |
| TTATGGGTCTTAACTTTATC+AGG | + | chr7.3:40950020-40950039 | MS.gene94244:intron | 30.0% | |
| ! | CACATACTTTATTTGGTACA+GGG | + | chr7.3:40950843-40950862 | MS.gene94244:intron | 30.0% |
| ! | CTACTCTAGAAAAACCAAAT+AGG | + | chr7.3:40949295-40949314 | MS.gene94244:intron | 30.0% |
| ! | GCTTTAAGTGTTATGTTTGA+AGG | + | chr7.3:40949042-40949061 | MS.gene94244:intron | 30.0% |
| ! | TCACATACTTTATTTGGTAC+AGG | + | chr7.3:40950842-40950861 | MS.gene94244:intron | 30.0% |
| !! | AAGAAGGATTTAGAGCATTT+TGG | + | chr7.3:40950127-40950146 | MS.gene94244:CDS | 30.0% |
| !!! | ATAGGAGAGTTTTTTATGGA+AGG | + | chr7.3:40949615-40949634 | MS.gene94244:intron | 30.0% |
| !!! | CGGTTTTGAAATATCATGTT+TGG | + | chr7.3:40948789-40948808 | MS.gene94244:intron | 30.0% |
| !!! | GAATTCATCTTTTTTCCCAA+GGG | - | chr7.3:40951289-40951308 | None:intergenic | 30.0% |
| !!! | GTGTATTTTGTTTTATGGTG+AGG | + | chr7.3:40948647-40948666 | MS.gene94244:intron | 30.0% |
| !!! | TGAATTCATCTTTTTTCCCA+AGG | - | chr7.3:40951290-40951309 | None:intergenic | 30.0% |
| !!! | TGCGATTCAATAGTTTTGTT+TGG | + | chr7.3:40951409-40951428 | MS.gene94244:intron | 30.0% |
| !!! | TTTTTTGGTCAAATAGCTAC+CGG | - | chr7.3:40948595-40948614 | None:intergenic | 30.0% |
| AAATTGAAGAGATTGTCTGC+TGG | + | chr7.3:40949813-40949832 | MS.gene94244:intron | 35.0% | |
| AAGGTAGAAGCTCTGTATTT+CGG | + | chr7.3:40948872-40948891 | MS.gene94244:intron | 35.0% | |
| ACCATAGCATTTGAATCATC+CGG | - | chr7.3:40951053-40951072 | None:intergenic | 35.0% | |
| CAACGTATTGTCAAAGAAGA+AGG | + | chr7.3:40950111-40950130 | MS.gene94244:CDS | 35.0% | |
| CATTTCCATTGGATCTTGTA+AGG | + | chr7.3:40951674-40951693 | MS.gene94244:CDS | 35.0% | |
| CGTGTTCTTACTAAATCCAA+AGG | - | chr7.3:40950444-40950463 | None:intergenic | 35.0% | |
| CTCCTAGTCTAGTAATAACA+GGG | - | chr7.3:40949723-40949742 | None:intergenic | 35.0% | |
| GACACTAATTAAGCCCTTAA+TGG | + | chr7.3:40950508-40950527 | MS.gene94244:intron | 35.0% | |
| GAGAAACTTAAAGCTATGCA+AGG | - | chr7.3:40950876-40950895 | None:intergenic | 35.0% | |
| GGTCACATATTTCGTAATGA+AGG | + | chr7.3:40951766-40951785 | MS.gene94244:CDS | 35.0% | |
| GTACAATTCAGTTAGATGGA+AGG | + | chr7.3:40948490-40948509 | MS.gene94244:intron | 35.0% | |
| GTGATTGGTGTAAACAGATT+TGG | + | chr7.3:40951451-40951470 | MS.gene94244:intron | 35.0% | |
| GTTATTACTAGACTAGGAGA+CGG | + | chr7.3:40949724-40949743 | MS.gene94244:intron | 35.0% | |
| TATGAAACAAAGACACTCCT+CGG | - | chr7.3:40949212-40949231 | None:intergenic | 35.0% | |
| TATGTACTTGCACTGAATTG+AGG | + | chr7.3:40950942-40950961 | MS.gene94244:intron | 35.0% | |
| TCTCCTAGTCTAGTAATAAC+AGG | - | chr7.3:40949724-40949743 | None:intergenic | 35.0% | |
| TCTTAACTTTATCAGGTGCA+AGG | + | chr7.3:40950027-40950046 | MS.gene94244:intron | 35.0% | |
| TGCAAATTGTGGTAAAAGCA+TGG | - | chr7.3:40950692-40950711 | None:intergenic | 35.0% | |
| TGGGAATGTAATTTATCAGC+CGG | + | chr7.3:40949405-40949424 | MS.gene94244:intron | 35.0% | |
| TGTACGTGTACTTCAGAATT+TGG | + | chr7.3:40950253-40950272 | MS.gene94244:intron | 35.0% | |
| TGTCGAAAAGTTGTGTTTGA+AGG | + | chr7.3:40948853-40948872 | MS.gene94244:intron | 35.0% | |
| TTATTACTAGACTAGGAGAC+GGG | + | chr7.3:40949725-40949744 | MS.gene94244:intron | 35.0% | |
| ! | ACTTTGATAGCTGGAAAGAA+GGG | - | chr7.3:40951884-40951903 | None:intergenic | 35.0% |
| ! | ATGTAACTGGGTTGTTTCAT+TGG | + | chr7.3:40949912-40949931 | MS.gene94244:intron | 35.0% |
| ! | ATGTGCTGTTATTAAACCCT+TGG | + | chr7.3:40951270-40951289 | MS.gene94244:intron | 35.0% |
| ! | GCAAATTGTGGTAAAAGCAT+GGG | - | chr7.3:40950691-40950710 | None:intergenic | 35.0% |
| ! | GTCTATAACACCAGTTTGTT+CGG | + | chr7.3:40951736-40951755 | MS.gene94244:CDS | 35.0% |
| ! | TAACTGCCACTTATCGAAAA+AGG | + | chr7.3:40950567-40950586 | MS.gene94244:intron | 35.0% |
| ! | TAGACTCACCATTCTTTTTC+AGG | + | chr7.3:40948204-40948223 | MS.gene94244:CDS | 35.0% |
| ! | TCTATAACACCAGTTTGTTC+GGG | + | chr7.3:40951737-40951756 | MS.gene94244:CDS | 35.0% |
| ! | TGTAACTGGGTTGTTTCATT+GGG | + | chr7.3:40949913-40949932 | MS.gene94244:intron | 35.0% |
| ! | TGTGCTGTTATTAAACCCTT+GGG | + | chr7.3:40951271-40951290 | MS.gene94244:intron | 35.0% |
| ! | TTTATTTGGTACAGGGTGTT+GGG | + | chr7.3:40950850-40950869 | MS.gene94244:intron | 35.0% |
| !! | AGCATTTTGGAAAGGCAATT+TGG | + | chr7.3:40950140-40950159 | MS.gene94244:CDS | 35.0% |
| !! | AGCCTATTATTTCTGTAGCT+TGG | + | chr7.3:40949777-40949796 | MS.gene94244:intron | 35.0% |
| !! | AGGATTCTTTGGAATGTACA+AGG | + | chr7.3:40950719-40950738 | MS.gene94244:CDS | 35.0% |
| !! | CAAGGTATGCATTTTGATGT+CGG | + | chr7.3:40950045-40950064 | MS.gene94244:CDS | 35.0% |
| !! | GAAGGACATTTGATTTGTTG+GGG | + | chr7.3:40948508-40948527 | MS.gene94244:intron | 35.0% |
| !! | GGAAGGACATTTGATTTGTT+GGG | + | chr7.3:40948507-40948526 | MS.gene94244:intron | 35.0% |
| !! | GGATTCTTTGGAATGTACAA+GGG | + | chr7.3:40950720-40950739 | MS.gene94244:CDS | 35.0% |
| !! | GGATTTAGAGCATTTTGGAA+AGG | + | chr7.3:40950132-40950151 | MS.gene94244:CDS | 35.0% |
| !! | GTACCAACAAGGTTTTAATG+TGG | - | chr7.3:40949963-40949982 | None:intergenic | 35.0% |
| !! | GTTCTTTTTGGAAGTCTCAA+AGG | + | chr7.3:40950913-40950932 | MS.gene94244:CDS | 35.0% |
| !! | TGGAAGGACATTTGATTTGT+TGG | + | chr7.3:40948506-40948525 | MS.gene94244:intron | 35.0% |
| !!! | AGGTAATTGCCACTTTTTGT+TGG | + | chr7.3:40950475-40950494 | MS.gene94244:intron | 35.0% |
| !!! | TTGTTTTTGTTTGTGCGTTC+CGG | - | chr7.3:40951373-40951392 | None:intergenic | 35.0% |
| AACTTAATTGTCCGGAGAAG+TGG | - | chr7.3:40948555-40948574 | None:intergenic | 40.0% | |
| ACCACAATTTGCAGAGATGA+AGG | + | chr7.3:40950699-40950718 | MS.gene94244:CDS | 40.0% | |
| ACTTAATTGTCCGGAGAAGT+GGG | - | chr7.3:40948554-40948573 | None:intergenic | 40.0% | |
| AGAATGGTGAGTCTAGAAAG+AGG | - | chr7.3:40948199-40948218 | None:intergenic | 40.0% | |
| AGCATAACAGTCTCAACTCT+CGG | - | chr7.3:40950625-40950644 | None:intergenic | 40.0% | |
| AGCCCTGTTATTACTAGACT+AGG | + | chr7.3:40949718-40949737 | MS.gene94244:intron | 40.0% | |
| AGCTATTGCATTCTGTTCTG+GGG | + | chr7.3:40950328-40950347 | MS.gene94244:intron | 40.0% | |
| AGTCTAGTAATAACAGGGCT+TGG | - | chr7.3:40949718-40949737 | None:intergenic | 40.0% | |
| ATAAAAACAATACCGACGCC+GGG | - | chr7.3:40951841-40951860 | None:intergenic | 40.0% | |
| ATGGCAGAAGCTCTGTATTT+CGG | + | chr7.3:40948769-40948788 | MS.gene94244:intron | 40.0% | |
| CAGCTATTGCATTCTGTTCT+GGG | + | chr7.3:40950327-40950346 | MS.gene94244:intron | 40.0% | |
| CATAAAAACAATACCGACGC+CGG | - | chr7.3:40951842-40951861 | None:intergenic | 40.0% | |
| GCTGTTATAAGTTGCATGCT+TGG | + | chr7.3:40951475-40951494 | MS.gene94244:intron | 40.0% | |
| GGTTGAAAGGTTAGGTTTGA+TGG | + | chr7.3:40948750-40948769 | MS.gene94244:intron | 40.0% | |
| TATTACTAGACTAGGAGACG+GGG | + | chr7.3:40949726-40949745 | MS.gene94244:intron | 40.0% | |
| TCCTTCATCTCTGCAAATTG+TGG | - | chr7.3:40950703-40950722 | None:intergenic | 40.0% | |
| TCTTGCTTGTGGAAGTCTTT+CGG | + | chr7.3:40951076-40951095 | MS.gene94244:CDS | 40.0% | |
| TGCAGAGATGAAGGATTCTT+TGG | + | chr7.3:40950708-40950727 | MS.gene94244:CDS | 40.0% | |
| TGTGCATCATGCAAGAAAGT+TGG | - | chr7.3:40951251-40951270 | None:intergenic | 40.0% | |
| TTTAAGTGTGTGATTGGTGC+CGG | + | chr7.3:40948573-40948592 | MS.gene94244:intron | 40.0% | |
| TTTCGTAATGAAGGGATACG+AGG | + | chr7.3:40951775-40951794 | MS.gene94244:CDS | 40.0% | |
| ! | AGTTTTACCAGTGTCGTGTT+CGG | + | chr7.3:40948355-40948374 | MS.gene94244:intron | 40.0% |
| ! | CTTTATTTGGTACAGGGTGT+TGG | + | chr7.3:40950849-40950868 | MS.gene94244:intron | 40.0% |
| ! | GACTTTGATAGCTGGAAAGA+AGG | - | chr7.3:40951885-40951904 | None:intergenic | 40.0% |
| ! | TTTGGAATGTACAAGGGACT+TGG | + | chr7.3:40950726-40950745 | MS.gene94244:CDS | 40.0% |
| !! | ACTGTTTCTCAGCTTTTAGC+TGG | + | chr7.3:40948136-40948155 | MS.gene94244:CDS | 40.0% |
| !!! | GTTGCTCCTTTTTCGATAAG+TGG | - | chr7.3:40950576-40950595 | None:intergenic | 40.0% |
| AAGACTATGAAGCACGGACA+CGG | + | chr7.3:40949084-40949103 | MS.gene94244:intron | 45.0% | |
| ACAAAGACACTCCTCGGATT+AGG | - | chr7.3:40949206-40949225 | None:intergenic | 45.0% | |
| ACCAAATGTCCCGAACAAAC+TGG | - | chr7.3:40951749-40951768 | None:intergenic | 45.0% | |
| ACTACGAAGCAATGACACAC+AGG | - | chr7.3:40948384-40948403 | None:intergenic | 45.0% | |
| ACTCGCAGCAACATTTCCAT+TGG | + | chr7.3:40951663-40951682 | MS.gene94244:intron | 45.0% | |
| ACTGTTGTAGTCCGTTCAAC+TGG | + | chr7.3:40949981-40950000 | MS.gene94244:intron | 45.0% | |
| ATCCAAAGGATATAAGGCCG+AGG | - | chr7.3:40950430-40950449 | None:intergenic | 45.0% | |
| CAACACATTAAACCAACCCG+TGG | - | chr7.3:40949437-40949456 | None:intergenic | 45.0% | |
| CATTGGATCTTGTAAGGCGA+AGG | + | chr7.3:40951680-40951699 | MS.gene94244:CDS | 45.0% | |
| CCAGAACAGAATGCAATAGC+TGG | - | chr7.3:40950329-40950348 | None:intergenic | 45.0% | |
| CCAGCTATTGCATTCTGTTC+TGG | + | chr7.3:40950326-40950345 | MS.gene94244:intron | 45.0% | |
| CTAGCTCCCAAGAAACAATC+AGG | + | chr7.3:40951331-40951350 | MS.gene94244:intron | 45.0% | |
| CTTCGCCTTACAAGATCCAA+TGG | - | chr7.3:40951682-40951701 | None:intergenic | 45.0% | |
| CTTGCTTGTGGAAGTCTTTC+GGG | + | chr7.3:40951077-40951096 | MS.gene94244:CDS | 45.0% | |
| GAGAATCATAGAGCAAAGGC+TGG | + | chr7.3:40950351-40950370 | MS.gene94244:CDS | 45.0% | |
| GAGTACTACAAGGTTGTTCC+CGG | + | chr7.3:40951820-40951839 | MS.gene94244:CDS | 45.0% | |
| GCATTGTATCAGCAACAGGT+GGG | + | chr7.3:40951099-40951118 | MS.gene94244:intron | 45.0% | |
| GCCGGATGATTCAAATGCTA+TGG | + | chr7.3:40951049-40951068 | MS.gene94244:CDS | 45.0% | |
| GCTATTGCATTCTGTTCTGG+GGG | + | chr7.3:40950329-40950348 | MS.gene94244:intron | 45.0% | |
| GCTGTTAGAAGTTGCCTACT+TGG | + | chr7.3:40951199-40951218 | MS.gene94244:intron | 45.0% | |
| GGAACAACCTTGTAGTACTC+GGG | - | chr7.3:40951820-40951839 | None:intergenic | 45.0% | |
| GGACTACAACAGTACCAACA+AGG | - | chr7.3:40949974-40949993 | None:intergenic | 45.0% | |
| GGGAACAACCTTGTAGTACT+CGG | - | chr7.3:40951821-40951840 | None:intergenic | 45.0% | |
| GGGATACGAGGTTTGTATAG+AGG | + | chr7.3:40951787-40951806 | MS.gene94244:CDS | 45.0% | |
| GTCTTTGTGCACTTTGTCAG+TGG | + | chr7.3:40950381-40950400 | MS.gene94244:CDS | 45.0% | |
| GTTAGAAGTTGCCTACTTGG+TGG | + | chr7.3:40951202-40951221 | MS.gene94244:intron | 45.0% | |
| TACGTTGAGCCTCGTACAAA+AGG | - | chr7.3:40950098-40950117 | None:intergenic | 45.0% | |
| TTTGTGCACTTTGTCAGTGG+TGG | + | chr7.3:40950384-40950403 | MS.gene94244:CDS | 45.0% | |
| ! | ACCAGTTTGTTCGGGACATT+TGG | + | chr7.3:40951745-40951764 | MS.gene94244:CDS | 45.0% |
| ! | ACGAGAGCTTGCGTTCTTTT+TGG | + | chr7.3:40950901-40950920 | MS.gene94244:CDS | 45.0% |
| ! | CATTTTGCCCGAGTACTACA+AGG | + | chr7.3:40951810-40951829 | MS.gene94244:CDS | 45.0% |
| ! | GCATGCTTGGTGAGTTAATG+TGG | + | chr7.3:40951488-40951507 | MS.gene94244:intron | 45.0% |
| ! | GGTCAGCCTGATTGTTTCTT+GGG | - | chr7.3:40951340-40951359 | None:intergenic | 45.0% |
| ! | TTTGTCAGTGGTGGTTTGTC+AGG | + | chr7.3:40950393-40950412 | MS.gene94244:CDS | 45.0% |
| !! | GGGCTTGGTTAGTTTGAATG+AGG | - | chr7.3:40949703-40949722 | None:intergenic | 45.0% |
| !! | GTTTCTCAGCTTTTAGCTGG+TGG | + | chr7.3:40948139-40948158 | MS.gene94244:CDS | 45.0% |
| !! | TCAGCTTTTAGCTGGTGGTT+TGG | + | chr7.3:40948144-40948163 | MS.gene94244:CDS | 45.0% |
| !!! | CAAGACTAGCCTTTTGTACG+AGG | + | chr7.3:40950086-40950105 | MS.gene94244:CDS | 45.0% |
| AAGAACACGACTTGCAGCAC+AGG | + | chr7.3:40950455-40950474 | MS.gene94244:CDS | 50.0% | |
| AGAACGCAAGCTCTCGTAAG+CGG | - | chr7.3:40950898-40950917 | None:intergenic | 50.0% | |
| AGGATGCAGTTAGAAGGGGT+TGG | + | chr7.3:40951700-40951719 | MS.gene94244:CDS | 50.0% | |
| AGGCGAAGGATGCAGTTAGA+AGG | + | chr7.3:40951694-40951713 | MS.gene94244:CDS | 50.0% | |
| AGGCTGACCCTGTGTTAATC+CGG | + | chr7.3:40951351-40951370 | MS.gene94244:intron | 50.0% | |
| ATGCAGTTAGAAGGGGTTGG+TGG | + | chr7.3:40951703-40951722 | MS.gene94244:CDS | 50.0% | |
| CCTGTGATTTCCCACTTCTC+CGG | + | chr7.3:40948541-40948560 | MS.gene94244:intron | 50.0% | |
| GCGAAGGATGCAGTTAGAAG+GGG | + | chr7.3:40951696-40951715 | MS.gene94244:CDS | 50.0% | |
| GCTATGGTCAGTCTTGCTTG+TGG | + | chr7.3:40951065-40951084 | MS.gene94244:CDS | 50.0% | |
| GGCATTGTATCAGCAACAGG+TGG | + | chr7.3:40951098-40951117 | MS.gene94244:intron | 50.0% | |
| GGCGAAGGATGCAGTTAGAA+GGG | + | chr7.3:40951695-40951714 | MS.gene94244:CDS | 50.0% | |
| GGGGGAGAATCATAGAGCAA+AGG | + | chr7.3:40950347-40950366 | MS.gene94244:CDS | 50.0% | |
| GTGCGTTCCGGATTAACACA+GGG | - | chr7.3:40951361-40951380 | None:intergenic | 50.0% | |
| TCTTGCTCAGTGCTGTGACA+TGG | - | chr7.3:40950071-40950090 | None:intergenic | 50.0% | |
| TGTGCGTTCCGGATTAACAC+AGG | - | chr7.3:40951362-40951381 | None:intergenic | 50.0% | |
| ! | GGGTCAGCCTGATTGTTTCT+TGG | - | chr7.3:40951341-40951360 | None:intergenic | 50.0% |
| ! | TCGGGCATTGTATCAGCAAC+AGG | + | chr7.3:40951095-40951114 | MS.gene94244:CDS | 50.0% |
| ! | TGCCTCGGCCTTATATCCTT+TGG | + | chr7.3:40950425-40950444 | MS.gene94244:CDS | 50.0% |
| !! | AAGTTGCCTACTTGGTGGTG+CGG | + | chr7.3:40951207-40951226 | MS.gene94244:intron | 50.0% |
| !! | ACTAGGAGACGGGGTTTTGA+AGG | + | chr7.3:40949735-40949754 | MS.gene94244:intron | 50.0% |
| !! | CTTTTAGCTGGTGGTTTGGC+TGG | + | chr7.3:40948148-40948167 | MS.gene94244:CDS | 50.0% |
| !! | GGGACTTGGTGCAACATTGT+TGG | + | chr7.3:40950740-40950759 | MS.gene94244:CDS | 50.0% |
| CCGGAGAAGTGGGAAATCAC+AGG | - | chr7.3:40948544-40948563 | None:intergenic | 55.0% | |
| GTCAGGTATGACAGCTGCCT+CGG | + | chr7.3:40950410-40950429 | MS.gene94244:CDS | 55.0% | |
| TACAAGGTTGTTCCCGGCGT+CGG | + | chr7.3:40951826-40951845 | MS.gene94244:CDS | 55.0% | |
| TTATCAGCCGGTGCTTGCCA+CGG | + | chr7.3:40949417-40949436 | MS.gene94244:intron | 55.0% | |
| !! | GGTGGTTTGGCTGGTGCTTT+TGG | + | chr7.3:40948157-40948176 | MS.gene94244:CDS | 55.0% |
| !! | TATGTGTCGGTGTCGTGTCG+CGG | + | chr7.3:40949172-40949191 | MS.gene94244:intron | 55.0% |
| !!! | CGGGGTTTTGAAGGCAAGAG+TGG | + | chr7.3:40949744-40949763 | MS.gene94244:intron | 55.0% |
| AACCAACCCGTGGCAAGCAC+CGG | - | chr7.3:40949427-40949446 | None:intergenic | 60.0% | |
| AACGCACCGCACCACCAAGT+AGG | - | chr7.3:40951216-40951235 | None:intergenic | 60.0% | |
| CAGGACACCGAACACGACAC+TGG | - | chr7.3:40948365-40948384 | None:intergenic | 60.0% | |
| TATCAGCCGGTGCTTGCCAC+GGG | + | chr7.3:40949418-40949437 | MS.gene94244:intron | 60.0% | |
| TGAAGCACGGACACGGACAC+CGG | + | chr7.3:40949091-40949110 | MS.gene94244:intron | 60.0% | |
| !! | ATGTGTCGGTGTCGTGTCGC+GGG | + | chr7.3:40949173-40949192 | MS.gene94244:intron | 60.0% |
| ACGGACACGGACACCGGACA+CGG | + | chr7.3:40949097-40949116 | MS.gene94244:intron | 65.0% | |
| !! | TGTGTCGGTGTCGTGTCGCG+GGG | + | chr7.3:40949174-40949193 | MS.gene94244:intron | 65.0% |
| AGCCGGTGCTTGCCACGGGT+TGG | + | chr7.3:40949422-40949441 | MS.gene94244:intron | 70.0% | |
| CGGGGGACACGCCTAATCCG+AGG | + | chr7.3:40949192-40949211 | MS.gene94244:intron | 70.0% | |
| !! | GGTGTCGGCGTGTCCGTGTC+CGG | - | chr7.3:40949113-40949132 | None:intergenic | 70.0% |
| !! | GTGTCGGTGTCGTGTCGCGG+GGG | + | chr7.3:40949175-40949194 | MS.gene94244:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 40948076 | 40951909 | 40948076 | ID=MS.gene94244 |
| chr7.3 | mRNA | 40948076 | 40951909 | 40948076 | ID=MS.gene94244.t1;Parent=MS.gene94244 |
| chr7.3 | exon | 40948076 | 40948225 | 40948076 | ID=MS.gene94244.t1.exon1;Parent=MS.gene94244.t1 |
| chr7.3 | CDS | 40948076 | 40948225 | 40948076 | ID=cds.MS.gene94244.t1;Parent=MS.gene94244.t1 |
| chr7.3 | exon | 40950042 | 40950227 | 40950042 | ID=MS.gene94244.t1.exon2;Parent=MS.gene94244.t1 |
| chr7.3 | CDS | 40950042 | 40950227 | 40950042 | ID=cds.MS.gene94244.t1;Parent=MS.gene94244.t1 |
| chr7.3 | exon | 40950330 | 40950476 | 40950330 | ID=MS.gene94244.t1.exon3;Parent=MS.gene94244.t1 |
| chr7.3 | CDS | 40950330 | 40950476 | 40950330 | ID=cds.MS.gene94244.t1;Parent=MS.gene94244.t1 |
| chr7.3 | exon | 40950660 | 40950761 | 40950660 | ID=MS.gene94244.t1.exon4;Parent=MS.gene94244.t1 |
| chr7.3 | CDS | 40950660 | 40950761 | 40950660 | ID=cds.MS.gene94244.t1;Parent=MS.gene94244.t1 |
| chr7.3 | exon | 40950864 | 40950934 | 40950864 | ID=MS.gene94244.t1.exon5;Parent=MS.gene94244.t1 |
| chr7.3 | CDS | 40950864 | 40950934 | 40950864 | ID=cds.MS.gene94244.t1;Parent=MS.gene94244.t1 |
| chr7.3 | exon | 40951049 | 40951116 | 40951049 | ID=MS.gene94244.t1.exon6;Parent=MS.gene94244.t1 |
| chr7.3 | CDS | 40951049 | 40951116 | 40951049 | ID=cds.MS.gene94244.t1;Parent=MS.gene94244.t1 |
| chr7.3 | exon | 40951671 | 40951909 | 40951671 | ID=MS.gene94244.t1.exon7;Parent=MS.gene94244.t1 |
| chr7.3 | CDS | 40951671 | 40951909 | 40951671 | ID=cds.MS.gene94244.t1;Parent=MS.gene94244.t1 |
| Gene Sequence |
| Protein sequence |
