Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94420.t1 | RHN44099.1 | 86.5 | 444 | 36 | 3 | 1 | 422 | 3 | 444 | 2.70E-200 | 708 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94420.t1 | A0A396GSG1 | 86.5 | 444 | 36 | 3 | 1 | 422 | 3 | 444 | 1.9e-200 | 708.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene94420 | 0.803367 | 3.61E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene94420 | 0.809865 | 1.53E-50 | -1.69E-46 |
| MS.gene049669 | MS.gene94420 | 0.810959 | 8.89E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene94420 | 0.801119 | 1.05E-48 | -1.69E-46 |
| MS.gene050750 | MS.gene94420 | 0.812609 | 3.89E-51 | -1.69E-46 |
| MS.gene050953 | MS.gene94420 | 0.802874 | 4.56E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene94420 | 0.824563 | 7.54E-54 | -1.69E-46 |
| MS.gene052674 | MS.gene94420 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene052675 | MS.gene94420 | 0.802598 | 5.20E-49 | -1.69E-46 |
| MS.gene052677 | MS.gene94420 | 0.81028 | 1.25E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene94420 | 0.830614 | 2.66E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene94420 | 0.817192 | 3.75E-52 | -1.69E-46 |
| MS.gene054093 | MS.gene94420 | 0.814565 | 1.44E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene94420 | 0.80632 | 8.71E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene94420 | 0.801206 | 1.00E-48 | -1.69E-46 |
| MS.gene054467 | MS.gene94420 | 0.81134 | 7.35E-51 | -1.69E-46 |
| MS.gene054468 | MS.gene94420 | 0.820821 | 5.60E-53 | -1.69E-46 |
| MS.gene054559 | MS.gene94420 | 0.81239 | 4.34E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene94420 | 0.813855 | 2.07E-51 | -1.69E-46 |
| MS.gene055367 | MS.gene94420 | 0.806782 | 6.96E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene94420 | 0.83654 | 8.82E-57 | -1.69E-46 |
| MS.gene05595 | MS.gene94420 | 0.801481 | 8.82E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene94420 | 0.805957 | 1.04E-49 | -1.69E-46 |
| MS.gene057156 | MS.gene94420 | -0.820003 | 8.63E-53 | -1.69E-46 |
| MS.gene05761 | MS.gene94420 | 0.812174 | 4.84E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene94420 | 0.847144 | 1.39E-59 | -1.69E-46 |
| MS.gene060167 | MS.gene94420 | 0.82072 | 5.91E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene94420 | 0.821485 | 3.94E-53 | -1.69E-46 |
| MS.gene060683 | MS.gene94420 | 0.814678 | 1.36E-51 | -1.69E-46 |
| MS.gene060685 | MS.gene94420 | 0.815961 | 7.07E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene94420 | 0.819072 | 1.41E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94420.t1 | MTR_7g007590 | 80.405 | 444 | 38 | 5 | 1 | 422 | 1 | 417 | 0.0 | 679 |
| MS.gene94420.t1 | MTR_8g047200 | 65.957 | 282 | 38 | 5 | 141 | 385 | 1 | 261 | 1.92e-113 | 333 |
| MS.gene94420.t1 | MTR_8g006760 | 43.131 | 313 | 147 | 10 | 42 | 333 | 38 | 340 | 4.49e-63 | 208 |
| MS.gene94420.t1 | MTR_7g407120 | 66.250 | 80 | 9 | 1 | 260 | 339 | 1 | 62 | 4.19e-26 | 105 |
| MS.gene94420.t1 | MTR_4g087360 | 31.329 | 316 | 189 | 10 | 48 | 349 | 14 | 315 | 8.06e-26 | 109 |
| MS.gene94420.t1 | MTR_4g087360 | 31.329 | 316 | 189 | 10 | 48 | 349 | 42 | 343 | 1.79e-25 | 108 |
| MS.gene94420.t1 | MTR_6g066120 | 81.356 | 59 | 10 | 1 | 364 | 421 | 4 | 62 | 2.14e-23 | 94.0 |
| MS.gene94420.t1 | MTR_4g087350 | 31.285 | 179 | 115 | 4 | 125 | 299 | 85 | 259 | 8.06e-16 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94420.t1 | AT4G37440 | 33.010 | 309 | 146 | 10 | 48 | 334 | 71 | 340 | 1.30e-37 | 142 |
| MS.gene94420.t1 | AT4G37440 | 33.010 | 309 | 146 | 10 | 48 | 334 | 71 | 340 | 1.63e-37 | 141 |
| MS.gene94420.t1 | AT4G37440 | 33.010 | 309 | 146 | 10 | 48 | 334 | 71 | 340 | 1.80e-37 | 142 |
| MS.gene94420.t1 | AT3G59670 | 33.796 | 216 | 121 | 7 | 124 | 325 | 130 | 337 | 1.46e-26 | 112 |
| MS.gene94420.t1 | AT3G50040 | 48.182 | 110 | 56 | 1 | 122 | 230 | 104 | 213 | 9.34e-23 | 100 |
| MS.gene94420.t1 | AT3G50040 | 48.182 | 110 | 56 | 1 | 122 | 230 | 104 | 213 | 9.34e-23 | 100 |
| MS.gene94420.t1 | AT3G50040 | 48.182 | 110 | 56 | 1 | 122 | 230 | 104 | 213 | 9.34e-23 | 100 |
| MS.gene94420.t1 | AT3G50040 | 48.182 | 110 | 56 | 1 | 122 | 230 | 104 | 213 | 1.41e-22 | 99.0 |
Find 81 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGTCACGTTCCAATTC+TGG | 0.163205 | 7.1:-86655748 | None:intergenic |
| GCAACTCAATCGAACATAAT+TGG | 0.172585 | 7.1:+86658263 | MS.gene94420:CDS |
| GTTAATATAATTGGGAATTC+TGG | 0.232894 | 7.1:+86655916 | MS.gene94420:CDS |
| CATTTAGAGCGCCACATTAT+AGG | 0.242366 | 7.1:-86657448 | None:intergenic |
| CTATAATGTGGCGCTCTAAA+TGG | 0.246676 | 7.1:+86657449 | MS.gene94420:CDS |
| AATGTGGAAGTTAATATAAT+TGG | 0.249082 | 7.1:+86655907 | MS.gene94420:CDS |
| CAGGACCCAGTTTGAGGTTC+AGG | 0.279305 | 7.1:+86658460 | MS.gene94420:CDS |
| CTGCTCTTCAACTGATTCAT+TGG | 0.289020 | 7.1:-86659247 | None:intergenic |
| AGTTCAAGTTCTAGTTCTTT+TGG | 0.310205 | 7.1:+86655985 | MS.gene94420:CDS |
| TTTCTCCCTGAACCTCAAAC+TGG | 0.332711 | 7.1:-86658466 | None:intergenic |
| CTTACCCTCCTTGTGTTCCT+AGG | 0.334663 | 7.1:-86659372 | None:intergenic |
| AACATAATTGGGCCATCTAA+TGG | 0.346103 | 7.1:+86658275 | MS.gene94420:CDS |
| CTTTGAATTCCCTCAGATCT+AGG | 0.356218 | 7.1:-86657601 | None:intergenic |
| GTTGCAGAACAGAACTTTCC+AGG | 0.381277 | 7.1:-86658245 | None:intergenic |
| TGGAACTGGAATTTCTTTAC+CGG | 0.391721 | 7.1:-86658333 | None:intergenic |
| CCGGCAAAACTGCCTGGAAC+TGG | 0.402376 | 7.1:-86658347 | None:intergenic |
| AATTGGGAATTCTGGTTTCA+AGG | 0.402572 | 7.1:+86655924 | MS.gene94420:CDS |
| GCTCATGATGGTCCCGTAGA+AGG | 0.405262 | 7.1:+86657801 | MS.gene94420:CDS |
| GGTTTAATAGAATGAGCATT+TGG | 0.407887 | 7.1:-86659324 | None:intergenic |
| ATGTGGAAGTTAATATAATT+GGG | 0.418323 | 7.1:+86655908 | MS.gene94420:CDS |
| TCTTGTCACGTTCCAATTCT+GGG | 0.423238 | 7.1:-86655747 | None:intergenic |
| CAACTCAATCGAACATAATT+GGG | 0.431077 | 7.1:+86658264 | MS.gene94420:CDS |
| AGGAGGGTAAGGAGGAAGTT+TGG | 0.434590 | 7.1:+86659384 | MS.gene94420:CDS |
| GAACGATTAAATCCATTAGA+TGG | 0.440535 | 7.1:-86658287 | None:intergenic |
| AAGTTTGCAGTAGATGATAT+TGG | 0.441551 | 7.1:+86657565 | MS.gene94420:CDS |
| GGTAAAGAAATTCCAGTTCC+AGG | 0.449895 | 7.1:+86658335 | MS.gene94420:CDS |
| AAGGTAATGCTGATAATGTT+GGG | 0.452199 | 7.1:+86658075 | MS.gene94420:intron |
| TGAAACTTGAGCTCGAGAAA+TGG | 0.461659 | 7.1:-86659274 | None:intergenic |
| ATTGGGAATTCTGGTTTCAA+GGG | 0.462911 | 7.1:+86655925 | MS.gene94420:CDS |
| ACTAGTTCTGATTCTGCATT+CGG | 0.464087 | 7.1:+86656018 | MS.gene94420:CDS |
| ATCATCATGAAAACCTTCTA+CGG | 0.468644 | 7.1:-86657814 | None:intergenic |
| GACTACATGGTCAGTGAGAA+TGG | 0.470585 | 7.1:+86659297 | MS.gene94420:CDS |
| GAAGAAGAAGAAGGTGACCT+TGG | 0.472632 | 7.1:+86655775 | MS.gene94420:CDS |
| CTTCCATCGAATCTGCCAAC+AGG | 0.472666 | 7.1:+86658441 | MS.gene94420:CDS |
| GATTTACCGGCAAAACTGCC+TGG | 0.478754 | 7.1:-86658353 | None:intergenic |
| TGCCAACAGGACCCAGTTTG+AGG | 0.480126 | 7.1:+86658454 | MS.gene94420:CDS |
| CTACGGGACCATCATGAGCT+TGG | 0.481763 | 7.1:-86657797 | None:intergenic |
| AGGACCCAGTTTGAGGTTCA+GGG | 0.485472 | 7.1:+86658461 | MS.gene94420:CDS |
| TTACCCTCCTTGTGTTCCTA+GGG | 0.489585 | 7.1:-86659371 | None:intergenic |
| GAAGGTAATGCTGATAATGT+TGG | 0.499295 | 7.1:+86658074 | MS.gene94420:intron |
| GAATTCTGGTTTCAAGGGTG+TGG | 0.510002 | 7.1:+86655930 | MS.gene94420:CDS |
| GTTCCTAGGGAAATGTGTCT+TGG | 0.512760 | 7.1:-86659358 | None:intergenic |
| CTAGGAACACAAGGAGGGTA+AGG | 0.514099 | 7.1:+86659373 | MS.gene94420:CDS |
| AAGTCATGTGGAGAAAGAAC+AGG | 0.518229 | 7.1:+86657629 | MS.gene94420:CDS |
| TTGTAGAGATGAGGAGAATG+TGG | 0.520186 | 7.1:+86655891 | MS.gene94420:CDS |
| AAGATAGTAGAAGAAGAAGA+AGG | 0.527027 | 7.1:+86655766 | MS.gene94420:CDS |
| AACCTCAAACTGGGTCCTGT+TGG | 0.532726 | 7.1:-86658456 | None:intergenic |
| GAAACGTACCTCAATATAAG+TGG | 0.535203 | 7.1:-86656090 | None:intergenic |
| GGTCCTGTTGGCAGATTCGA+TGG | 0.537826 | 7.1:-86658444 | None:intergenic |
| TTCTCCCTGAACCTCAAACT+GGG | 0.539592 | 7.1:-86658465 | None:intergenic |
| AAAAGTTAACTGATCATTGG+AGG | 0.545239 | 7.1:+86657413 | MS.gene94420:CDS |
| AAGTTGAGAATTTGAAAACT+CGG | 0.545310 | 7.1:+86658198 | MS.gene94420:CDS |
| TTCTGCATTCGGTGATTCTG+AGG | 0.550235 | 7.1:+86656029 | MS.gene94420:CDS |
| AGCTCAAGTTTCAGACTACA+TGG | 0.555010 | 7.1:+86659284 | MS.gene94420:CDS |
| ACCGTGAAATATGAAAATCC+TGG | 0.561681 | 7.1:+86658227 | MS.gene94420:CDS |
| TGTGTCTTGGTTGTTGAACA+TGG | 0.565981 | 7.1:-86659345 | None:intergenic |
| TGCATTCGGTGATTCTGAGG+AGG | 0.569756 | 7.1:+86656032 | MS.gene94420:CDS |
| GTTGTTGTCTTGTAGAGATG+AGG | 0.573913 | 7.1:+86655882 | MS.gene94420:CDS |
| CACATTTCCCTAGGAACACA+AGG | 0.576001 | 7.1:+86659364 | MS.gene94420:CDS |
| CAAGTCAGTACCTAGATCTG+AGG | 0.578521 | 7.1:+86657591 | MS.gene94420:CDS |
| CTGTTGGCAGATTCGATGGA+AGG | 0.580005 | 7.1:-86658440 | None:intergenic |
| AGATCAAGTTAAACGATATG+TGG | 0.585624 | 7.1:+86658099 | MS.gene94420:CDS |
| TCATCATGAAAACCTTCTAC+GGG | 0.586519 | 7.1:-86657813 | None:intergenic |
| AGGTAATGCTGATAATGTTG+GGG | 0.590800 | 7.1:+86658076 | MS.gene94420:intron |
| AGAACCAAAAGAACAAAATG+TGG | 0.596405 | 7.1:+86655846 | MS.gene94420:CDS |
| GGAACACAAGGAGGGTAAGG+AGG | 0.597368 | 7.1:+86659376 | MS.gene94420:CDS |
| CAACCAAGACACATTTCCCT+AGG | 0.604185 | 7.1:+86659355 | MS.gene94420:CDS |
| GAAATACGTAAAAGAGATTG+CGG | 0.605017 | 7.1:+86657510 | MS.gene94420:CDS |
| TTCAAAGGACTAAAGTCATG+TGG | 0.606978 | 7.1:+86657617 | MS.gene94420:CDS |
| CGCAGCGGAGGCATAAAGTG+TGG | 0.607157 | 7.1:+86656061 | MS.gene94420:CDS |
| GGAGAAAGCCACTTATATTG+AGG | 0.610395 | 7.1:+86656082 | MS.gene94420:CDS |
| AAGTCAGTACCTAGATCTGA+GGG | 0.610939 | 7.1:+86657592 | MS.gene94420:CDS |
| AGTTAACTGATCATTGGAGG+AGG | 0.614517 | 7.1:+86657416 | MS.gene94420:CDS |
| GGTACATCTTTCCTATAATG+TGG | 0.617709 | 7.1:+86657437 | MS.gene94420:CDS |
| AGGAGGTTGAATCGCAGCGG+AGG | 0.622642 | 7.1:+86656049 | MS.gene94420:CDS |
| ATTTCCCTAGGAACACAAGG+AGG | 0.641761 | 7.1:+86659367 | MS.gene94420:CDS |
| CTAGATCTGAGGGAATTCAA+AGG | 0.647893 | 7.1:+86657602 | MS.gene94420:CDS |
| TTTCCCTAGGAACACAAGGA+GGG | 0.664488 | 7.1:+86659368 | MS.gene94420:CDS |
| CTGAGGAGGTTGAATCGCAG+CGG | 0.687151 | 7.1:+86656046 | MS.gene94420:CDS |
| TCATCTCTACAAGACAACAA+CGG | 0.688027 | 7.1:-86655880 | None:intergenic |
| GGGTGTGGAAGATAATTGTG+TGG | 0.726932 | 7.1:+86655945 | MS.gene94420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATATATAAAAGATAAAA+AGG | - | chr7.1:86657126-86657145 | None:intergenic | 10.0% |
| !! | ATATATAAAAGATAAAAAGG+AGG | - | chr7.1:86657123-86657142 | None:intergenic | 15.0% |
| !! | TAAATGCAAAAAATAAAAAC+TGG | - | chr7.1:86656202-86656221 | None:intergenic | 15.0% |
| !! | TGATAAAAAATTACTGTTAT+AGG | + | chr7.1:86656694-86656713 | MS.gene94420:intron | 15.0% |
| !!! | AATTTCAATTTATCCTTTTT+TGG | + | chr7.1:86656721-86656740 | MS.gene94420:intron | 15.0% |
| !!! | ATTAAAAATTTAGAATCTCA+TGG | - | chr7.1:86658029-86658048 | None:intergenic | 15.0% |
| !!! | TAGTTCTTTTTTTTTTTGTT+AGG | - | chr7.1:86656782-86656801 | None:intergenic | 15.0% |
| !!! | TCTGTTTTACTTTTTAAATA+TGG | + | chr7.1:86656226-86656245 | MS.gene94420:intron | 15.0% |
| !! | AAATGAGTATTAACAAAAAC+TGG | - | chr7.1:86658678-86658697 | None:intergenic | 20.0% |
| !! | AATGTGGAAGTTAATATAAT+TGG | + | chr7.1:86655907-86655926 | MS.gene94420:CDS | 20.0% |
| !! | ATGTGGAAGTTAATATAATT+GGG | + | chr7.1:86655908-86655927 | MS.gene94420:CDS | 20.0% |
| !!! | AACAAATTGTTATTTTTCCA+CGG | - | chr7.1:86659015-86659034 | None:intergenic | 20.0% |
| !!! | AAGAGTATTTTACTATTTCA+AGG | - | chr7.1:86658801-86658820 | None:intergenic | 20.0% |
| !!! | ATTATGAACATTTTTCAAAC+TGG | + | chr7.1:86657973-86657992 | MS.gene94420:intron | 20.0% |
| !!! | TTTGTTAGGTTTTTCAATTT+TGG | - | chr7.1:86656768-86656787 | None:intergenic | 20.0% |
| ! | AACAAAGAATACAGATAACA+TGG | - | chr7.1:86658871-86658890 | None:intergenic | 25.0% |
| ! | AACTCTAACGTTAAAAGTAA+AGG | - | chr7.1:86659080-86659099 | None:intergenic | 25.0% |
| ! | AAGTTGAGAATTTGAAAACT+CGG | + | chr7.1:86658198-86658217 | MS.gene94420:CDS | 25.0% |
| ! | AATATGTTTAAACACTGACA+CGG | - | chr7.1:86657371-86657390 | None:intergenic | 25.0% |
| ! | AGAAAAAGTTAACTGATCAT+TGG | + | chr7.1:86657410-86657429 | MS.gene94420:CDS | 25.0% |
| ! | AGCAAAACACATCATAAAAA+AGG | - | chr7.1:86657025-86657044 | None:intergenic | 25.0% |
| ! | ATGTATTATCAACTTGAGAA+GGG | + | chr7.1:86658411-86658430 | MS.gene94420:intron | 25.0% |
| ! | GTTAATATAATTGGGAATTC+TGG | + | chr7.1:86655916-86655935 | MS.gene94420:CDS | 25.0% |
| ! | TACTATGGTATGAAATTACT+TGG | + | chr7.1:86657709-86657728 | MS.gene94420:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr7.1:86656434-86656453 | MS.gene94420:intron | 25.0% |
| ! | TTCTTGTAATGTTATGATTC+AGG | + | chr7.1:86659212-86659231 | MS.gene94420:intron | 25.0% |
| ! | TTTCTCAATGTTGTAGTTAT+TGG | + | chr7.1:86656109-86656128 | MS.gene94420:intron | 25.0% |
| !! | ATTTTCAAATTACCTTGTGT+TGG | + | chr7.1:86657282-86657301 | MS.gene94420:intron | 25.0% |
| !! | ATTTTCAATCATGTCAACAA+AGG | - | chr7.1:86658159-86658178 | None:intergenic | 25.0% |
| !! | CATTATTATCTTCTTTTCCA+AGG | - | chr7.1:86655795-86655814 | None:intergenic | 25.0% |
| !! | GTTACTCTTATAGTTTTTCT+AGG | - | chr7.1:86656373-86656392 | None:intergenic | 25.0% |
| !! | TAATGAGTTGGATCAAAATA+TGG | + | chr7.1:86656414-86656433 | MS.gene94420:intron | 25.0% |
| !! | TATTTTACTATACACATGAC+AGG | - | chr7.1:86658826-86658845 | None:intergenic | 25.0% |
| !!! | GCTGCTATGTATTTTTTATA+AGG | + | chr7.1:86657304-86657323 | MS.gene94420:intron | 25.0% |
| AAAAGTTAACTGATCATTGG+AGG | + | chr7.1:86657413-86657432 | MS.gene94420:CDS | 30.0% | |
| AAACTGGATTATAAAAGCTG+TGG | - | chr7.1:86658662-86658681 | None:intergenic | 30.0% | |
| AAGATAGTAGAAGAAGAAGA+AGG | + | chr7.1:86655766-86655785 | MS.gene94420:CDS | 30.0% | |
| AAGTTTGCAGTAGATGATAT+TGG | + | chr7.1:86657565-86657584 | MS.gene94420:CDS | 30.0% | |
| AATAAAAACCAAGCTCATGA+TGG | + | chr7.1:86657789-86657808 | MS.gene94420:CDS | 30.0% | |
| AATAAATGTCCTTGGTATCT+TGG | + | chr7.1:86658710-86658729 | MS.gene94420:intron | 30.0% | |
| ACTAAACAAAACCAAAAGCA+TGG | - | chr7.1:86658581-86658600 | None:intergenic | 30.0% | |
| ACTATCAACGCAAAATAAAC+TGG | - | chr7.1:86657739-86657758 | None:intergenic | 30.0% | |
| AGAACCAAAAGAACAAAATG+TGG | + | chr7.1:86655846-86655865 | MS.gene94420:CDS | 30.0% | |
| AGATACCAAGGACATTTATT+TGG | - | chr7.1:86658710-86658729 | None:intergenic | 30.0% | |
| AGATCAAGTTAAACGATATG+TGG | + | chr7.1:86658099-86658118 | MS.gene94420:CDS | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | + | chr7.1:86656402-86656421 | MS.gene94420:intron | 30.0% | |
| ATCATCATGAAAACCTTCTA+CGG | - | chr7.1:86657817-86657836 | None:intergenic | 30.0% | |
| ATTGTGAACAACTTTCTTCA+TGG | - | chr7.1:86658622-86658641 | None:intergenic | 30.0% | |
| CAACTCAATCGAACATAATT+GGG | + | chr7.1:86658264-86658283 | MS.gene94420:CDS | 30.0% | |
| CACGTTCAGATAATTCATTT+AGG | + | chr7.1:86656930-86656949 | MS.gene94420:intron | 30.0% | |
| CATAGTACGAGAAAAAACAA+TGG | - | chr7.1:86657696-86657715 | None:intergenic | 30.0% | |
| CTGAAAGGTAAGTAAAGTAT+GGG | + | chr7.1:86656628-86656647 | MS.gene94420:intron | 30.0% | |
| GAAATACGTAAAAGAGATTG+CGG | + | chr7.1:86657510-86657529 | MS.gene94420:CDS | 30.0% | |
| GAACGATTAAATCCATTAGA+TGG | - | chr7.1:86658290-86658309 | None:intergenic | 30.0% | |
| GATACCAAGGACATTTATTT+GGG | - | chr7.1:86658709-86658728 | None:intergenic | 30.0% | |
| GATGTATTATCAACTTGAGA+AGG | + | chr7.1:86658410-86658429 | MS.gene94420:intron | 30.0% | |
| GGAAACTAATGCAATAGAAA+TGG | - | chr7.1:86658548-86658567 | None:intergenic | 30.0% | |
| GGTTTAATAGAATGAGCATT+TGG | - | chr7.1:86659327-86659346 | None:intergenic | 30.0% | |
| GTTAAAGTCTGAATCAAACA+AGG | + | chr7.1:86657896-86657915 | MS.gene94420:intron | 30.0% | |
| TCTGTTTCATTGATATGAGA+AGG | + | chr7.1:86658056-86658075 | MS.gene94420:intron | 30.0% | |
| TTATCCCAAATAAATGTCCT+TGG | + | chr7.1:86658702-86658721 | MS.gene94420:intron | 30.0% | |
| TTGTCAAATAAAGGCTATAG+CGG | - | chr7.1:86658975-86658994 | None:intergenic | 30.0% | |
| ! | AAGGTAATGCTGATAATGTT+GGG | + | chr7.1:86658075-86658094 | MS.gene94420:intron | 30.0% |
| ! | TCAACCACATTTTGTTCTTT+TGG | - | chr7.1:86655853-86655872 | None:intergenic | 30.0% |
| ! | TCCAGGATTTTCATATTTCA+CGG | - | chr7.1:86658231-86658250 | None:intergenic | 30.0% |
| ! | TTTTCCATTCTACGACAAAT+GGG | - | chr7.1:86659129-86659148 | None:intergenic | 30.0% |
| !! | AGAGTATTTTACTATACACG+TGG | - | chr7.1:86658760-86658779 | None:intergenic | 30.0% |
| !! | GCATGAATATCCTTAGTTTT+AGG | + | chr7.1:86656865-86656884 | MS.gene94420:intron | 30.0% |
| !! | TAATGTTATGATTCAGGTTG+AGG | + | chr7.1:86659218-86659237 | MS.gene94420:intron | 30.0% |
| !! | TTAGTGGTGTTGTCAAATAA+AGG | - | chr7.1:86658984-86659003 | None:intergenic | 30.0% |
| !!! | AGTTCAAGTTCTAGTTCTTT+TGG | + | chr7.1:86655985-86656004 | MS.gene94420:CDS | 30.0% |
| !!! | CATTGTTTTTTCTCGTACTA+TGG | + | chr7.1:86657694-86657713 | MS.gene94420:CDS | 30.0% |
| !!! | TTTATCCTTTTTTGGCCAAT+AGG | + | chr7.1:86656729-86656748 | MS.gene94420:intron | 30.0% |
| AACATAATTGGGCCATCTAA+TGG | + | chr7.1:86658275-86658294 | MS.gene94420:CDS | 35.0% | |
| AAGAACTAACCTCATACAGA+AGG | + | chr7.1:86656794-86656813 | MS.gene94420:intron | 35.0% | |
| AAGAATACAGATAACATGGC+CGG | - | chr7.1:86658867-86658886 | None:intergenic | 35.0% | |
| AATCATTCACCAAGATACCA+AGG | - | chr7.1:86658722-86658741 | None:intergenic | 35.0% | |
| AATTATCTGAACGTGTCGTA+CGG | - | chr7.1:86656925-86656944 | None:intergenic | 35.0% | |
| ACCGTGAAATATGAAAATCC+TGG | + | chr7.1:86658227-86658246 | MS.gene94420:CDS | 35.0% | |
| ATCCTATTACGCAGAGTAAT+TGG | - | chr7.1:86659157-86659176 | None:intergenic | 35.0% | |
| CAAAATGTAGAACACTGACA+CGG | - | chr7.1:86657176-86657195 | None:intergenic | 35.0% | |
| CGCATATAACTCAGATTTAC+CGG | - | chr7.1:86658369-86658388 | None:intergenic | 35.0% | |
| CGGTAAATCTGAGTTATATG+CGG | + | chr7.1:86658367-86658386 | MS.gene94420:intron | 35.0% | |
| GAAACGTACCTCAATATAAG+TGG | - | chr7.1:86656093-86656112 | None:intergenic | 35.0% | |
| GATTGAACTAGGTTTAACCA+TGG | + | chr7.1:86656167-86656186 | MS.gene94420:intron | 35.0% | |
| GCAACTCAATCGAACATAAT+TGG | + | chr7.1:86658263-86658282 | MS.gene94420:CDS | 35.0% | |
| GCTGAAAGGTAAGTAAAGTA+TGG | + | chr7.1:86656627-86656646 | MS.gene94420:intron | 35.0% | |
| GGACATTGTTCTGTTGAAAA+GGG | + | chr7.1:86656996-86657015 | MS.gene94420:intron | 35.0% | |
| GGTACATCTTTCCTATAATG+TGG | + | chr7.1:86657437-86657456 | MS.gene94420:CDS | 35.0% | |
| GGTTTATTGCTTCTTCCTAT+TGG | - | chr7.1:86656747-86656766 | None:intergenic | 35.0% | |
| TCATCATGAAAACCTTCTAC+GGG | - | chr7.1:86657816-86657835 | None:intergenic | 35.0% | |
| TCATCTCTACAAGACAACAA+CGG | - | chr7.1:86655883-86655902 | None:intergenic | 35.0% | |
| TGGAACTGGAATTTCTTTAC+CGG | - | chr7.1:86658336-86658355 | None:intergenic | 35.0% | |
| TGTAGTTATTGGACTGAACT+AGG | + | chr7.1:86656120-86656139 | MS.gene94420:intron | 35.0% | |
| TGTCAAATAAAGGCTATAGC+GGG | - | chr7.1:86658974-86658993 | None:intergenic | 35.0% | |
| TTATTTCACGCCAACATGTT+CGG | + | chr7.1:86656974-86656993 | MS.gene94420:intron | 35.0% | |
| TTCAAAGGACTAAAGTCATG+TGG | + | chr7.1:86657617-86657636 | MS.gene94420:CDS | 35.0% | |
| TTCCAATTACTCTGCGTAAT+AGG | + | chr7.1:86659152-86659171 | MS.gene94420:intron | 35.0% | |
| TTCTTCCTATTGGCCAAAAA+AGG | - | chr7.1:86656737-86656756 | None:intergenic | 35.0% | |
| ! | AGGTAATGCTGATAATGTTG+GGG | + | chr7.1:86658076-86658095 | MS.gene94420:intron | 35.0% |
| ! | CATAATTCTGCTTCTTTTGC+CGG | + | chr7.1:86658314-86658333 | MS.gene94420:CDS | 35.0% |
| ! | GAAGGTAATGCTGATAATGT+TGG | + | chr7.1:86658074-86658093 | MS.gene94420:intron | 35.0% |
| ! | GTCTTTGATAATCCGAAGTT+TGG | + | chr7.1:86656605-86656624 | MS.gene94420:intron | 35.0% |
| ! | GTTTTCCATTCTACGACAAA+TGG | - | chr7.1:86659130-86659149 | None:intergenic | 35.0% |
| ! | TCTCAACTCTCTGTTTCTTA+GGG | + | chr7.1:86656576-86656595 | MS.gene94420:intron | 35.0% |
| ! | TTCTACATTTTGGACACTAG+TGG | + | chr7.1:86657184-86657203 | MS.gene94420:intron | 35.0% |
| !! | AATTGGGAATTCTGGTTTCA+AGG | + | chr7.1:86655924-86655943 | MS.gene94420:CDS | 35.0% |
| !! | ACTAGTTCTGATTCTGCATT+CGG | + | chr7.1:86656018-86656037 | MS.gene94420:CDS | 35.0% |
| !! | ATTGGGAATTCTGGTTTCAA+GGG | + | chr7.1:86655925-86655944 | MS.gene94420:CDS | 35.0% |
| !! | TGAGCTTGGTTTTTATTCTC+TGG | - | chr7.1:86657786-86657805 | None:intergenic | 35.0% |
| !!! | GGGTTTGGTTATTGTTTTTG+TGG | + | chr7.1:86656553-86656572 | MS.gene94420:intron | 35.0% |
| AAAACTGGTTGAACCAACCA+TGG | - | chr7.1:86656187-86656206 | None:intergenic | 40.0% | |
| AAGTCAGTACCTAGATCTGA+GGG | + | chr7.1:86657592-86657611 | MS.gene94420:CDS | 40.0% | |
| AAGTCATGTGGAGAAAGAAC+AGG | + | chr7.1:86657629-86657648 | MS.gene94420:CDS | 40.0% | |
| AATACATAGCAGCCAACACA+AGG | - | chr7.1:86657297-86657316 | None:intergenic | 40.0% | |
| AGAAAGGAGAGTAGATCAGA+TGG | + | chr7.1:86656315-86656334 | MS.gene94420:intron | 40.0% | |
| AGAATACAGATAACATGGCC+GGG | - | chr7.1:86658866-86658885 | None:intergenic | 40.0% | |
| AGCTCAAGTTTCAGACTACA+TGG | + | chr7.1:86659284-86659303 | MS.gene94420:CDS | 40.0% | |
| AGTTAACTGATCATTGGAGG+AGG | + | chr7.1:86657416-86657435 | MS.gene94420:CDS | 40.0% | |
| AGTTGAACCAGGATTGAACT+AGG | + | chr7.1:86656156-86656175 | MS.gene94420:intron | 40.0% | |
| ATCTTGTCACGTTCCAATTC+TGG | - | chr7.1:86655751-86655770 | None:intergenic | 40.0% | |
| ATTATCTGAACGTGTCGTAC+GGG | - | chr7.1:86656924-86656943 | None:intergenic | 40.0% | |
| ATTGGACTGAACTAGGAAGT+AGG | + | chr7.1:86656127-86656146 | MS.gene94420:intron | 40.0% | |
| CTAGATCTGAGGGAATTCAA+AGG | + | chr7.1:86657602-86657621 | MS.gene94420:CDS | 40.0% | |
| CTTACCTTTCAGCCAAACTT+CGG | - | chr7.1:86656620-86656639 | None:intergenic | 40.0% | |
| CTTTGAATTCCCTCAGATCT+AGG | - | chr7.1:86657604-86657623 | None:intergenic | 40.0% | |
| GAACTAGGTTTAACCATGGT+TGG | + | chr7.1:86656171-86656190 | MS.gene94420:intron | 40.0% | |
| GGAGAAAGCCACTTATATTG+AGG | + | chr7.1:86656082-86656101 | MS.gene94420:CDS | 40.0% | |
| GGGACATTGTTCTGTTGAAA+AGG | + | chr7.1:86656995-86657014 | MS.gene94420:intron | 40.0% | |
| GGTAAAGAAATTCCAGTTCC+AGG | + | chr7.1:86658335-86658354 | MS.gene94420:CDS | 40.0% | |
| GGTTAAACCTAGTTCAATCC+TGG | - | chr7.1:86656166-86656185 | None:intergenic | 40.0% | |
| GTCAAATAAAGGCTATAGCG+GGG | - | chr7.1:86658973-86658992 | None:intergenic | 40.0% | |
| GTTCAATCCTGGTTCAACTA+CGG | - | chr7.1:86656155-86656174 | None:intergenic | 40.0% | |
| GTTGTTGTCTTGTAGAGATG+AGG | + | chr7.1:86655882-86655901 | MS.gene94420:CDS | 40.0% | |
| TAATCCGAAGTTTGGCTGAA+AGG | + | chr7.1:86656613-86656632 | MS.gene94420:intron | 40.0% | |
| TATTTCACGCCAACATGTTC+GGG | + | chr7.1:86656975-86656994 | MS.gene94420:intron | 40.0% | |
| TCATGAGAACCTATGAAGCA+CGG | - | chr7.1:86657227-86657246 | None:intergenic | 40.0% | |
| TCTACATGCTCAAACAACCT+CGG | - | chr7.1:86656274-86656293 | None:intergenic | 40.0% | |
| TCTTGTCACGTTCCAATTCT+GGG | - | chr7.1:86655750-86655769 | None:intergenic | 40.0% | |
| TGAAAAAACTGGCCCAGAAT+TGG | + | chr7.1:86655735-86655754 | MS.gene94420:CDS | 40.0% | |
| TGAAACTTGAGCTCGAGAAA+TGG | - | chr7.1:86659277-86659296 | None:intergenic | 40.0% | |
| TGGGATAGGGTAGAACATTA+AGG | + | chr7.1:86656490-86656509 | MS.gene94420:intron | 40.0% | |
| TGTACCCATTTGTCGTAGAA+TGG | + | chr7.1:86659122-86659141 | MS.gene94420:intron | 40.0% | |
| TGTGTCTTGGTTGTTGAACA+TGG | - | chr7.1:86659348-86659367 | None:intergenic | 40.0% | |
| TTGTAGAGATGAGGAGAATG+TGG | + | chr7.1:86655891-86655910 | MS.gene94420:CDS | 40.0% | |
| TTTCAAGGTCAACACATGAC+AGG | - | chr7.1:86658786-86658805 | None:intergenic | 40.0% | |
| TTTCAGCCAGGATTCAAACT+CGG | + | chr7.1:86656660-86656679 | MS.gene94420:intron | 40.0% | |
| ! | ACTCTCTGTTTCTTAGGGAA+AGG | + | chr7.1:86656581-86656600 | MS.gene94420:intron | 40.0% |
| ! | CATTTAGAGCGCCACATTAT+AGG | - | chr7.1:86657451-86657470 | None:intergenic | 40.0% |
| ! | CGTGTCAGTGTTCTACATTT+TGG | + | chr7.1:86657174-86657193 | MS.gene94420:intron | 40.0% |
| ! | CTACAATTTTCTGTGATCCG+CGG | - | chr7.1:86658916-86658935 | None:intergenic | 40.0% |
| ! | CTATAATGTGGCGCTCTAAA+TGG | + | chr7.1:86657449-86657468 | MS.gene94420:CDS | 40.0% |
| ! | CTCTCTGTTTCTTAGGGAAA+GGG | + | chr7.1:86656582-86656601 | MS.gene94420:intron | 40.0% |
| ! | CTGCTCTTCAACTGATTCAT+TGG | - | chr7.1:86659250-86659269 | None:intergenic | 40.0% |
| ! | GTCGTGTTGATGTTGTAGAA+AGG | + | chr7.1:86656299-86656318 | MS.gene94420:intron | 40.0% |
| ! | GTCTCAACTCTCTGTTTCTT+AGG | + | chr7.1:86656575-86656594 | MS.gene94420:intron | 40.0% |
| ! | TCTCTGTTTCTTAGGGAAAG+GGG | + | chr7.1:86656583-86656602 | MS.gene94420:intron | 40.0% |
| !! | AGGTTTTCATGATGATGTCG+TGG | + | chr7.1:86657821-86657840 | MS.gene94420:CDS | 40.0% |
| !! | GGTTTTCATGATGATGTCGT+GGG | + | chr7.1:86657822-86657841 | MS.gene94420:CDS | 40.0% |
| AAAACCCCGAGTTTGAATCC+TGG | - | chr7.1:86656669-86656688 | None:intergenic | 45.0% | |
| AAACCCTATCCCACTAAGTG+GGG | - | chr7.1:86656539-86656558 | None:intergenic | 45.0% | |
| AAAGAGCGGCTATAGCATTG+CGG | - | chr7.1:86659044-86659063 | None:intergenic | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr7.1:86656318-86656337 | MS.gene94420:intron | 45.0% | |
| AGAAGGAATGCGCATTGGAT+TGG | + | chr7.1:86656811-86656830 | MS.gene94420:intron | 45.0% | |
| AGTGTCCAAAACATGTGCAC+AGG | - | chr7.1:86656897-86656916 | None:intergenic | 45.0% | |
| ATGCGCATTCCTTCTGTATG+AGG | - | chr7.1:86656806-86656825 | None:intergenic | 45.0% | |
| ATTTCCCTAGGAACACAAGG+AGG | + | chr7.1:86659367-86659386 | MS.gene94420:CDS | 45.0% | |
| CAAACCCTATCCCACTAAGT+GGG | - | chr7.1:86656540-86656559 | None:intergenic | 45.0% | |
| CAACCAAGACACATTTCCCT+AGG | + | chr7.1:86659355-86659374 | MS.gene94420:CDS | 45.0% | |
| CAAGTCAGTACCTAGATCTG+AGG | + | chr7.1:86657591-86657610 | MS.gene94420:CDS | 45.0% | |
| CACATTTCCCTAGGAACACA+AGG | + | chr7.1:86659364-86659383 | MS.gene94420:CDS | 45.0% | |
| CAGGGACACACCTAAAACTA+AGG | - | chr7.1:86656878-86656897 | None:intergenic | 45.0% | |
| CATACAGAAGGAATGCGCAT+TGG | + | chr7.1:86656806-86656825 | MS.gene94420:intron | 45.0% | |
| GAACAATGTCCCGAACATGT+TGG | - | chr7.1:86656987-86657006 | None:intergenic | 45.0% | |
| GAAGAAGAAGAAGGTGACCT+TGG | + | chr7.1:86655775-86655794 | MS.gene94420:CDS | 45.0% | |
| GACTACATGGTCAGTGAGAA+TGG | + | chr7.1:86659297-86659316 | MS.gene94420:CDS | 45.0% | |
| GAGGATAGTCAGATTGCTAG+AGG | + | chr7.1:86656337-86656356 | MS.gene94420:intron | 45.0% | |
| GGGCTATAACATTGTGGTGT+AGG | - | chr7.1:86658953-86658972 | None:intergenic | 45.0% | |
| GGGTGTGGAAGATAATTGTG+TGG | + | chr7.1:86655945-86655964 | MS.gene94420:CDS | 45.0% | |
| GTACCAGTGTTGTCAAAGAG+CGG | - | chr7.1:86659058-86659077 | None:intergenic | 45.0% | |
| GTGTCCAAAACATGTGCACA+GGG | - | chr7.1:86656896-86656915 | None:intergenic | 45.0% | |
| GTTCCTAGGGAAATGTGTCT+TGG | - | chr7.1:86659361-86659380 | None:intergenic | 45.0% | |
| GTTGCAGAACAGAACTTTCC+AGG | - | chr7.1:86658248-86658267 | None:intergenic | 45.0% | |
| TTACCCTCCTTGTGTTCCTA+GGG | - | chr7.1:86659374-86659393 | None:intergenic | 45.0% | |
| TTCAGCCAGGATTCAAACTC+GGG | + | chr7.1:86656661-86656680 | MS.gene94420:intron | 45.0% | |
| TTCCACGGTACGCTATTTAG+TGG | - | chr7.1:86659000-86659019 | None:intergenic | 45.0% | |
| TTCTCCCTGAACCTCAAACT+GGG | - | chr7.1:86658468-86658487 | None:intergenic | 45.0% | |
| TTTCCCTAGGAACACAAGGA+GGG | + | chr7.1:86659368-86659387 | MS.gene94420:CDS | 45.0% | |
| TTTCTCCCTGAACCTCAAAC+TGG | - | chr7.1:86658469-86658488 | None:intergenic | 45.0% | |
| ! | AATTTTCTGTGATCCGCGGT+TGG | - | chr7.1:86658912-86658931 | None:intergenic | 45.0% |
| ! | ATAGCGGGGCTATAACATTG+TGG | - | chr7.1:86658959-86658978 | None:intergenic | 45.0% |
| ! | CAAAACCAAAAGCATGGTGC+AGG | - | chr7.1:86658575-86658594 | None:intergenic | 45.0% |
| ! | TTCTGCATTCGGTGATTCTG+AGG | + | chr7.1:86656029-86656048 | MS.gene94420:CDS | 45.0% |
| !! | CTTTTAAGTGTTGCCAACCG+CGG | + | chr7.1:86658896-86658915 | MS.gene94420:intron | 45.0% |
| !! | GAATTCTGGTTTCAAGGGTG+TGG | + | chr7.1:86655930-86655949 | MS.gene94420:CDS | 45.0% |
| !! | AATTAAAAAACATTATATTA+TGG | - | chr7.1:86657855-86657874 | None:intergenic | 5.0% |
| !!! | AATAAAAAGAAAATTTTATT+TGG | - | chr7.1:86656959-86656978 | None:intergenic | 5.0% |
| AACCTCAAACTGGGTCCTGT+TGG | - | chr7.1:86658459-86658478 | None:intergenic | 50.0% | |
| ACTCTCGACCTGTCATAACC+CGG | + | chr7.1:86658845-86658864 | MS.gene94420:intron | 50.0% | |
| AGGAGGGTAAGGAGGAAGTT+TGG | + | chr7.1:86659384-86659403 | MS.gene94420:CDS | 50.0% | |
| AGTCAGATTGCTAGAGGCAG+AGG | + | chr7.1:86656343-86656362 | MS.gene94420:intron | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | + | chr7.1:86656526-86656545 | MS.gene94420:intron | 50.0% | |
| CACCACTAAATAGCGTACCG+TGG | + | chr7.1:86658995-86659014 | MS.gene94420:intron | 50.0% | |
| CCAAACCCTATCCCACTAAG+TGG | - | chr7.1:86656541-86656560 | None:intergenic | 50.0% | |
| CCAATTGAAGCATGACTCCG+AGG | + | chr7.1:86656254-86656273 | MS.gene94420:intron | 50.0% | |
| CCACTTAGTGGGATAGGGTT+TGG | + | chr7.1:86656538-86656557 | MS.gene94420:intron | 50.0% | |
| CCTCGGAGTCATGCTTCAAT+TGG | - | chr7.1:86656257-86656276 | None:intergenic | 50.0% | |
| CTAGGAACACAAGGAGGGTA+AGG | + | chr7.1:86659373-86659392 | MS.gene94420:CDS | 50.0% | |
| CTGTTGGCAGATTCGATGGA+AGG | - | chr7.1:86658443-86658462 | None:intergenic | 50.0% | |
| CTTACCCTCCTTGTGTTCCT+AGG | - | chr7.1:86659375-86659394 | None:intergenic | 50.0% | |
| CTTCCATCGAATCTGCCAAC+AGG | + | chr7.1:86658441-86658460 | MS.gene94420:CDS | 50.0% | |
| GATTTACCGGCAAAACTGCC+TGG | - | chr7.1:86658356-86658375 | None:intergenic | 50.0% | |
| GTAGGAACCGTAGTTGAACC+AGG | + | chr7.1:86656145-86656164 | MS.gene94420:intron | 50.0% | |
| TAACATGGCCGGGTTATGAC+AGG | - | chr7.1:86658856-86658875 | None:intergenic | 50.0% | |
| TAGCCGCTCTTTGACAACAC+TGG | + | chr7.1:86659052-86659071 | MS.gene94420:intron | 50.0% | |
| TCAGCCAGGATTCAAACTCG+GGG | + | chr7.1:86656662-86656681 | MS.gene94420:intron | 50.0% | |
| TCTACCCTATCCCACTACCT+GGG | - | chr7.1:86656484-86656503 | None:intergenic | 50.0% | |
| TGACCCCACTTAGTGGGATA+GGG | + | chr7.1:86656533-86656552 | MS.gene94420:intron | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | + | chr7.1:86656527-86656546 | MS.gene94420:intron | 50.0% | |
| TGTCTGTGTCCGTGCTTCAT+AGG | + | chr7.1:86657215-86657234 | MS.gene94420:intron | 50.0% | |
| TTCTACCCTATCCCACTACC+TGG | - | chr7.1:86656485-86656504 | None:intergenic | 50.0% | |
| ! | AGGACCCAGTTTGAGGTTCA+GGG | + | chr7.1:86658461-86658480 | MS.gene94420:CDS | 50.0% |
| ! | GTGTCCCTGTGCACATGTTT+TGG | + | chr7.1:86656889-86656908 | MS.gene94420:intron | 50.0% |
| ! | TGCATTCGGTGATTCTGAGG+AGG | + | chr7.1:86656032-86656051 | MS.gene94420:CDS | 50.0% |
| CTACCCTATCCCACTACCTG+GGG | - | chr7.1:86656483-86656502 | None:intergenic | 55.0% | |
| CTACGGGACCATCATGAGCT+TGG | - | chr7.1:86657800-86657819 | None:intergenic | 55.0% | |
| CTGACCCCACTTAGTGGGAT+AGG | + | chr7.1:86656532-86656551 | MS.gene94420:intron | 55.0% | |
| CTGAGGAGGTTGAATCGCAG+CGG | + | chr7.1:86656046-86656065 | MS.gene94420:CDS | 55.0% | |
| GCTCATGATGGTCCCGTAGA+AGG | + | chr7.1:86657801-86657820 | MS.gene94420:CDS | 55.0% | |
| GGAACACAAGGAGGGTAAGG+AGG | + | chr7.1:86659376-86659395 | MS.gene94420:CDS | 55.0% | |
| GGGCAGAGATTGTTTCAGCC+AGG | + | chr7.1:86656648-86656667 | MS.gene94420:intron | 55.0% | |
| GGTCCTGTTGGCAGATTCGA+TGG | - | chr7.1:86658447-86658466 | None:intergenic | 55.0% | |
| TGATCAATGTAGCCGACCCC+AGG | + | chr7.1:86656464-86656483 | MS.gene94420:intron | 55.0% | |
| TGCCAACAGGACCCAGTTTG+AGG | + | chr7.1:86658454-86658473 | MS.gene94420:CDS | 55.0% | |
| ! | CAAAAGCATGGTGCAGGCAG+TGG | - | chr7.1:86658569-86658588 | None:intergenic | 55.0% |
| ! | CACTGCCTGCACCATGCTTT+TGG | + | chr7.1:86658567-86658586 | MS.gene94420:intron | 55.0% |
| ! | CAGGACCCAGTTTGAGGTTC+AGG | + | chr7.1:86658460-86658479 | MS.gene94420:CDS | 55.0% |
| ! | CCAGTTCCAGGCAGTTTTGC+CGG | + | chr7.1:86658347-86658366 | MS.gene94420:CDS | 55.0% |
| AGGAGGTTGAATCGCAGCGG+AGG | + | chr7.1:86656049-86656068 | MS.gene94420:CDS | 60.0% | |
| ATGTAGCCGACCCCAGGTAG+TGG | + | chr7.1:86656470-86656489 | MS.gene94420:intron | 60.0% | |
| CCGGCAAAACTGCCTGGAAC+TGG | - | chr7.1:86658350-86658369 | None:intergenic | 60.0% | |
| CCTATCCCACTACCTGGGGT+CGG | - | chr7.1:86656479-86656498 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCAGGTAGT+GGG | + | chr7.1:86656471-86656490 | MS.gene94420:intron | 60.0% | |
| ! | CGCAGCGGAGGCATAAAGTG+TGG | + | chr7.1:86656061-86656080 | MS.gene94420:CDS | 60.0% |
| !! | CGACCCCAGGTAGTGGGATA+GGG | + | chr7.1:86656477-86656496 | MS.gene94420:intron | 60.0% |
| !! | CCGACCCCAGGTAGTGGGAT+AGG | + | chr7.1:86656476-86656495 | MS.gene94420:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 86655730 | 86659413 | 86655730 | ID=MS.gene94420 |
| chr7.1 | mRNA | 86655730 | 86659413 | 86655730 | ID=MS.gene94420.t1;Parent=MS.gene94420 |
| chr7.1 | exon | 86655730 | 86656103 | 86655730 | ID=MS.gene94420.t1.exon1;Parent=MS.gene94420.t1 |
| chr7.1 | CDS | 86655730 | 86656103 | 86655730 | ID=cds.MS.gene94420.t1;Parent=MS.gene94420.t1 |
| chr7.1 | exon | 86657408 | 86657715 | 86657408 | ID=MS.gene94420.t1.exon2;Parent=MS.gene94420.t1 |
| chr7.1 | CDS | 86657408 | 86657715 | 86657408 | ID=cds.MS.gene94420.t1;Parent=MS.gene94420.t1 |
| chr7.1 | exon | 86657787 | 86657843 | 86657787 | ID=MS.gene94420.t1.exon3;Parent=MS.gene94420.t1 |
| chr7.1 | CDS | 86657787 | 86657843 | 86657787 | ID=cds.MS.gene94420.t1;Parent=MS.gene94420.t1 |
| chr7.1 | exon | 86658078 | 86658368 | 86658078 | ID=MS.gene94420.t1.exon4;Parent=MS.gene94420.t1 |
| chr7.1 | CDS | 86658078 | 86658368 | 86658078 | ID=cds.MS.gene94420.t1;Parent=MS.gene94420.t1 |
| chr7.1 | exon | 86658432 | 86658490 | 86658432 | ID=MS.gene94420.t1.exon5;Parent=MS.gene94420.t1 |
| chr7.1 | CDS | 86658432 | 86658490 | 86658432 | ID=cds.MS.gene94420.t1;Parent=MS.gene94420.t1 |
| chr7.1 | exon | 86659234 | 86659413 | 86659234 | ID=MS.gene94420.t1.exon6;Parent=MS.gene94420.t1 |
| chr7.1 | CDS | 86659234 | 86659413 | 86659234 | ID=cds.MS.gene94420.t1;Parent=MS.gene94420.t1 |
| Gene Sequence |
| Protein sequence |
