Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97638.t1 | XP_013467635.1 | 94.7 | 246 | 9 | 1 | 24 | 269 | 19 | 260 | 2.90E-115 | 424.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97638.t1 | Q6DGZ0 | 29.0 | 245 | 148 | 5 | 51 | 269 | 16 | 260 | 2.2e-15 | 84.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97638.t1 | A0A072VIM1 | 94.7 | 246 | 9 | 1 | 24 | 269 | 19 | 260 | 2.1e-115 | 424.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene97638 | 0.802547 | 5.33E-49 | -1.69E-46 |
| MS.gene049419 | MS.gene97638 | -0.813185 | 2.91E-51 | -1.69E-46 |
| MS.gene049822 | MS.gene97638 | 0.800143 | 1.65E-48 | -1.69E-46 |
| MS.gene04984 | MS.gene97638 | 0.801237 | 9.90E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene97638 | 0.803174 | 3.95E-49 | -1.69E-46 |
| MS.gene050317 | MS.gene97638 | 0.805093 | 1.58E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene97638 | 0.801202 | 1.01E-48 | -1.69E-46 |
| MS.gene051831 | MS.gene97638 | 0.80685 | 6.73E-50 | -1.69E-46 |
| MS.gene052242 | MS.gene97638 | -0.814767 | 1.30E-51 | -1.69E-46 |
| MS.gene052434 | MS.gene97638 | 0.803604 | 3.22E-49 | -1.69E-46 |
| MS.gene052858 | MS.gene97638 | 0.802809 | 4.70E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene97638 | -0.800426 | 1.45E-48 | -1.69E-46 |
| MS.gene054479 | MS.gene97638 | 0.812071 | 5.10E-51 | -1.69E-46 |
| MS.gene055311 | MS.gene97638 | 0.805907 | 1.06E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene97638 | 0.803568 | 3.28E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene97638 | 0.806562 | 7.75E-50 | -1.69E-46 |
| MS.gene056787 | MS.gene97638 | 0.803855 | 2.86E-49 | -1.69E-46 |
| MS.gene056849 | MS.gene97638 | 0.806061 | 9.87E-50 | -1.69E-46 |
| MS.gene057055 | MS.gene97638 | 0.803738 | 3.02E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene97638 | 0.802194 | 6.30E-49 | -1.69E-46 |
| MS.gene058278 | MS.gene97638 | 0.80565 | 1.21E-49 | -1.69E-46 |
| MS.gene058758 | MS.gene97638 | 0.80573 | 1.16E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene97638 | 0.825271 | 5.13E-54 | -1.69E-46 |
| MS.gene06010 | MS.gene97638 | 0.829419 | 5.20E-55 | -1.69E-46 |
| MS.gene060869 | MS.gene97638 | 0.819978 | 8.74E-53 | -1.69E-46 |
| MS.gene060870 | MS.gene97638 | 0.821623 | 3.66E-53 | -1.69E-46 |
| MS.gene060998 | MS.gene97638 | 0.811672 | 6.23E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97638.t1 | MTR_1g053570 | 93.680 | 269 | 8 | 2 | 1 | 269 | 1 | 260 | 0.0 | 507 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97638.t1 | AT3G57910 | 57.143 | 273 | 104 | 3 | 2 | 269 | 1 | 265 | 9.56e-90 | 267 |
Find 77 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTACATGGCTGACCTTTCT+AGG | 0.178606 | 1.1:+39977666 | MS.gene97638:CDS |
| CAACAAAATCTTCATCAAAA+AGG | 0.182204 | 1.1:+39977729 | MS.gene97638:CDS |
| TGAATCAAGTTCTGCCCTTC+TGG | 0.280205 | 1.1:+39981504 | MS.gene97638:CDS |
| CCAATGTTCGATTGTGGTAT+TGG | 0.325731 | 1.1:-39980167 | None:intergenic |
| CAATTTCCCGATTCTCCAAT+TGG | 0.343725 | 1.1:-39980469 | None:intergenic |
| CAGGTTCTGATGGAAGAATT+CGG | 0.366166 | 1.1:+39980374 | MS.gene97638:CDS |
| CGCTTGACCAATTGGAGAAT+CGG | 0.368611 | 1.1:+39980462 | MS.gene97638:CDS |
| AGGTTCTGCCCTTGGCAAAC+AGG | 0.373865 | 1.1:+39980223 | MS.gene97638:CDS |
| CCCACAAGGAGAAGAAGAAA+AGG | 0.377470 | 1.1:+39980315 | MS.gene97638:CDS |
| GCCAATTGAAAGCTCTTAAC+TGG | 0.377717 | 1.1:+39980069 | MS.gene97638:CDS |
| GCCCTTCTGGATAACTGCCC+TGG | 0.383796 | 1.1:+39981517 | MS.gene97638:CDS |
| CTCTTGGAAGAGTTGATTGA+AGG | 0.396961 | 1.1:-39980047 | None:intergenic |
| GTTATCATCATCTTGTTCTT+CGG | 0.400286 | 1.1:-39977639 | None:intergenic |
| CTGAATCAACAACATCTAAC+AGG | 0.403954 | 1.1:+39977606 | MS.gene97638:CDS |
| CGACGGTCACGAGCAGGTAT+AGG | 0.404502 | 1.1:+39980281 | MS.gene97638:CDS |
| TGCCCTTGGCAAACAGGGAT+CGG | 0.414677 | 1.1:+39980229 | MS.gene97638:CDS |
| GCCAGTTAAGAGCTTTCAAT+TGG | 0.418381 | 1.1:-39980070 | None:intergenic |
| AGGATGAATAATAGAATTAT+CGG | 0.419728 | 1.1:-39977699 | None:intergenic |
| AAGAGCTTTCAATTGGCTCT+TGG | 0.424774 | 1.1:-39980063 | None:intergenic |
| GCCCTTGGCAAACAGGGATC+GGG | 0.430528 | 1.1:+39980230 | MS.gene97638:CDS |
| TGGTCATCTTCATTGATTCC+AGG | 0.438571 | 1.1:-39981535 | None:intergenic |
| AAATCACAATCGACAGGAAA+AGG | 0.441458 | 1.1:+39980342 | MS.gene97638:CDS |
| TCAGCATCATCCTCGTTCTT+CGG | 0.442789 | 1.1:-39980500 | None:intergenic |
| AAAGGCTACGCTTGACCAAT+TGG | 0.445171 | 1.1:+39980454 | MS.gene97638:CDS |
| TTGGCAAACAGGGATCGGGC+AGG | 0.449474 | 1.1:+39980234 | MS.gene97638:CDS |
| TGCCCGATCCCTGTTTGCCA+AGG | 0.459471 | 1.1:-39980232 | None:intergenic |
| TCTCCTTGTGGGGATCCTCT+AGG | 0.462647 | 1.1:-39980304 | None:intergenic |
| TGAACAAACCTTGGCAAAAG+TGG | 0.471141 | 1.1:+39980139 | MS.gene97638:CDS |
| TTCAATTACTGCCTCTTCTG+TGG | 0.476483 | 1.1:+39981339 | MS.gene97638:CDS |
| GCTTGACCAATTGGAGAATC+GGG | 0.477485 | 1.1:+39980463 | MS.gene97638:CDS |
| TATACACCAGGTTCTGCCCT+TGG | 0.478103 | 1.1:+39980215 | MS.gene97638:CDS |
| GAAATTCGACGGTCACGAGC+AGG | 0.483570 | 1.1:+39980275 | MS.gene97638:CDS |
| ATCGGGCAGGGCTGAACCAG+TGG | 0.511366 | 1.1:+39980247 | MS.gene97638:CDS |
| TGGCAAACAGGGATCGGGCA+GGG | 0.511464 | 1.1:+39980235 | MS.gene97638:CDS |
| ATTTAAGCTTCTCAAACAGA+TGG | 0.513804 | 1.1:+39980190 | MS.gene97638:CDS |
| TGATGGAAGAATTCGGGTCA+AGG | 0.517660 | 1.1:+39980381 | MS.gene97638:CDS |
| AGGTTCTGATGGAAGAATTC+GGG | 0.520316 | 1.1:+39980375 | MS.gene97638:CDS |
| GAAGAACGAGCAGGTTCTGA+TGG | 0.522543 | 1.1:+39980364 | MS.gene97638:CDS |
| CCACAAGGAGAAGAAGAAAA+GGG | 0.524848 | 1.1:+39980316 | MS.gene97638:CDS |
| ATTGGAGAATCGGGAAATTG+TGG | 0.527475 | 1.1:+39980472 | MS.gene97638:CDS |
| GGTCATCTTCATTGATTCCA+GGG | 0.530782 | 1.1:-39981534 | None:intergenic |
| AGAAGTCACGATGGCAGAGT+AGG | 0.531906 | 1.1:+39980405 | MS.gene97638:CDS |
| AGAGGAAGAAATAACAGAAG+AGG | 0.537870 | 1.1:+39980538 | MS.gene97638:CDS |
| TGTTTGCCAAGGGCAGAACC+TGG | 0.540602 | 1.1:-39980221 | None:intergenic |
| TGTTAATTTCAACAAGGCAA+AGG | 0.545569 | 1.1:+39980436 | MS.gene97638:CDS |
| GCCCGATCCCTGTTTGCCAA+GGG | 0.546633 | 1.1:-39980231 | None:intergenic |
| TTTAAGCTTCTCAAACAGAT+GGG | 0.551840 | 1.1:+39980191 | MS.gene97638:CDS |
| CGGAAGGAAGAAACCTAGAA+AGG | 0.553163 | 1.1:-39977679 | None:intergenic |
| GGGAGGAAATCACAATCGAC+AGG | 0.554805 | 1.1:+39980336 | MS.gene97638:CDS |
| TCACTTTGCATCCACAGAAG+AGG | 0.562538 | 1.1:-39981350 | None:intergenic |
| ACAAGAGGATGAACAAACCT+TGG | 0.566502 | 1.1:+39980130 | MS.gene97638:CDS |
| GGTTCTGCCCTTGGCAAACA+GGG | 0.570825 | 1.1:+39980224 | MS.gene97638:CDS |
| TTAAATCCAATGTTCGATTG+TGG | 0.577496 | 1.1:-39980173 | None:intergenic |
| GCATCATCCTCGTTCTTCGG+TGG | 0.578959 | 1.1:-39980497 | None:intergenic |
| AGAAAGAAAGCAAATACAAG+AGG | 0.580568 | 1.1:+39980115 | MS.gene97638:CDS |
| CGTCGAATTTCAATACCCAC+TGG | 0.583668 | 1.1:-39980263 | None:intergenic |
| AAGCTCTTAACTGGCAAGAA+CGG | 0.587734 | 1.1:+39980078 | MS.gene97638:CDS |
| TCGGGCAGGGCTGAACCAGT+GGG | 0.592431 | 1.1:+39980248 | MS.gene97638:CDS |
| CCAATACCACAATCGAACAT+TGG | 0.594956 | 1.1:+39980167 | MS.gene97638:CDS |
| TGAGGGTGAAGATCAAGAAG+AGG | 0.599844 | 1.1:+39980520 | MS.gene97638:CDS |
| CAGGAAAAGGAAGAACGAGC+AGG | 0.609170 | 1.1:+39980355 | MS.gene97638:CDS |
| CAAGGAGAAGAAGAAAAGGG+AGG | 0.611846 | 1.1:+39980319 | MS.gene97638:CDS |
| TTCCAGGGCAGTTATCCAGA+AGG | 0.613101 | 1.1:-39981519 | None:intergenic |
| GAAGAACGAGGATGATGCTG+AGG | 0.617320 | 1.1:+39980502 | MS.gene97638:CDS |
| TGATGATAACGATGACTACA+TGG | 0.620395 | 1.1:+39977652 | MS.gene97638:CDS |
| TGAATAATAGAATTATCGGA+AGG | 0.629552 | 1.1:-39977695 | None:intergenic |
| AAACAGATGGGTTATACACC+AGG | 0.633040 | 1.1:+39980203 | MS.gene97638:CDS |
| TCAATGTATTAATGAAACTG+AGG | 0.636801 | 1.1:+39981310 | MS.gene97638:CDS |
| TCCAGGGCAGTTATCCAGAA+GGG | 0.637909 | 1.1:-39981518 | None:intergenic |
| CAATGTATTAATGAAACTGA+GGG | 0.643954 | 1.1:+39981311 | MS.gene97638:CDS |
| CAGTGGGTATTGAAATTCGA+CGG | 0.653278 | 1.1:+39980264 | MS.gene97638:CDS |
| AGTTATTGTTAATTTCAACA+AGG | 0.655513 | 1.1:+39980430 | MS.gene97638:CDS |
| AGGCCTAGAGGATCCCCACA+AGG | 0.671378 | 1.1:+39980301 | MS.gene97638:CDS |
| AAGAACGAGGATGATGCTGA+GGG | 0.681423 | 1.1:+39980503 | MS.gene97638:CDS |
| ACGAGCAGGTATAGGCCTAG+AGG | 0.682619 | 1.1:+39980289 | MS.gene97638:CDS |
| TGTGGAACCACCGAAGAACG+AGG | 0.697276 | 1.1:+39980490 | MS.gene97638:CDS |
| GGTCAAGGCAGAAGTCACGA+TGG | 0.740710 | 1.1:+39980396 | MS.gene97638:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCATCATTTAAAAATATA+TGG | - | chr1.1:39981425-39981444 | None:intergenic | 10.0% |
| !!! | TTCTATATAATTCTTTTTTT+TGG | + | chr1.1:39979149-39979168 | MS.gene97638:intron | 10.0% |
| !! | AATCAAAAAAATAAGATACA+TGG | - | chr1.1:39978890-39978909 | None:intergenic | 15.0% |
| !! | AATCAATTGAAATGAATAAT+AGG | - | chr1.1:39977785-39977804 | None:intergenic | 15.0% |
| !! | ATCAATTGAAATGAATAATA+GGG | - | chr1.1:39977784-39977803 | None:intergenic | 15.0% |
| !!! | AAAAATTAAGTTGATATGTA+TGG | - | chr1.1:39980576-39980595 | None:intergenic | 15.0% |
| !!! | AATTCTTATTTCTTCTAAAA+GGG | + | chr1.1:39979818-39979837 | MS.gene97638:intron | 15.0% |
| !!! | ATTTATTTAAAAGCATGATT+GGG | - | chr1.1:39977841-39977860 | None:intergenic | 15.0% |
| !!! | ATTTTTTCTAAAAAAGTGAT+TGG | - | chr1.1:39979722-39979741 | None:intergenic | 15.0% |
| !!! | CACTTTTTAAATTGTTATAA+AGG | - | chr1.1:39979979-39979998 | None:intergenic | 15.0% |
| !!! | TATTTATTTAAAAGCATGAT+TGG | - | chr1.1:39977842-39977861 | None:intergenic | 15.0% |
| !!! | TTTTTTCAATTAAGATTAGA+GGG | + | chr1.1:39978337-39978356 | MS.gene97638:intron | 15.0% |
| !!! | TTTTTTTCAATTAAGATTAG+AGG | + | chr1.1:39978336-39978355 | MS.gene97638:intron | 15.0% |
| !!! | TTTTTTTTGGTTATATGTAT+TGG | + | chr1.1:39979162-39979181 | MS.gene97638:intron | 15.0% |
| !! | AACAAAATCTTCATCAAAAA+GGG | + | chr1.1:39977730-39977749 | MS.gene97638:CDS | 20.0% |
| !! | AACATTGTACAAATCATTTA+TGG | + | chr1.1:39979407-39979426 | MS.gene97638:intron | 20.0% |
| !! | AATTCAATACAATTGACATT+TGG | + | chr1.1:39981455-39981474 | MS.gene97638:intron | 20.0% |
| !! | AGGATGAATAATAGAATTAT+CGG | - | chr1.1:39977702-39977721 | None:intergenic | 20.0% |
| !! | AGTTATTGTTAATTTCAACA+AGG | + | chr1.1:39980430-39980449 | MS.gene97638:CDS | 20.0% |
| !! | CAATGTTTAAAAAACTAAAC+CGG | + | chr1.1:39979228-39979247 | MS.gene97638:intron | 20.0% |
| !! | TTGGGAATATTAATTAAACT+TGG | - | chr1.1:39979908-39979927 | None:intergenic | 20.0% |
| !! | TTGTACAAATACAAATACAT+AGG | - | chr1.1:39979533-39979552 | None:intergenic | 20.0% |
| !! | TTTAAATGATGAAACTACAA+TGG | + | chr1.1:39981431-39981450 | MS.gene97638:intron | 20.0% |
| !!! | ATTCTTATTTCTTCTAAAAG+GGG | + | chr1.1:39979819-39979838 | MS.gene97638:intron | 20.0% |
| !!! | CAATTCTTATTTCTTCTAAA+AGG | + | chr1.1:39979817-39979836 | MS.gene97638:intron | 20.0% |
| !!! | CACACTTAATTTTTAAGAAA+CGG | - | chr1.1:39978661-39978680 | None:intergenic | 20.0% |
| !!! | TTTTAATAAAATGAGCTCAT+AGG | + | chr1.1:39978483-39978502 | MS.gene97638:intron | 20.0% |
| !!! | TTTTTCAATTAAGATTAGAG+GGG | + | chr1.1:39978338-39978357 | MS.gene97638:intron | 20.0% |
| ! | AATAGCTATATCAGATATCT+TGG | - | chr1.1:39978786-39978805 | None:intergenic | 25.0% |
| ! | AGAAATCTGCATATTAACAA+GGG | - | chr1.1:39980015-39980034 | None:intergenic | 25.0% |
| ! | ATACATACCATGATATGTAT+CGG | - | chr1.1:39980738-39980757 | None:intergenic | 25.0% |
| ! | ATAGCTATATCAGATATCTT+GGG | - | chr1.1:39978785-39978804 | None:intergenic | 25.0% |
| ! | ATGATCAAATCAGTAATTCA+CGG | - | chr1.1:39979098-39979117 | None:intergenic | 25.0% |
| ! | ATGTTTGTTCAATGTTCATT+CGG | + | chr1.1:39979354-39979373 | MS.gene97638:intron | 25.0% |
| ! | ATTGATGTCCAAAATCTTTA+AGG | + | chr1.1:39978850-39978869 | MS.gene97638:intron | 25.0% |
| ! | ATTTGACCATATCAAAAACT+AGG | - | chr1.1:39980607-39980626 | None:intergenic | 25.0% |
| ! | CAAACATTATAAATCCCATT+TGG | - | chr1.1:39978255-39978274 | None:intergenic | 25.0% |
| ! | CAAATGGGATTTATAATGTT+TGG | + | chr1.1:39978253-39978272 | MS.gene97638:intron | 25.0% |
| ! | CAACAAAATCTTCATCAAAA+AGG | + | chr1.1:39977729-39977748 | MS.gene97638:CDS | 25.0% |
| ! | CAATGTATTAATGAAACTGA+GGG | + | chr1.1:39981311-39981330 | MS.gene97638:CDS | 25.0% |
| ! | CATTACATATTAACAAGAGA+AGG | - | chr1.1:39979456-39979475 | None:intergenic | 25.0% |
| ! | CCAATAGATAAAAAAGATGA+GGG | + | chr1.1:39979924-39979943 | MS.gene97638:intron | 25.0% |
| ! | CTAACTGTTATTATTGAACT+TGG | + | chr1.1:39981226-39981245 | MS.gene97638:intron | 25.0% |
| ! | CTATAAGAATTGAAAACAGA+GGG | - | chr1.1:39979014-39979033 | None:intergenic | 25.0% |
| ! | GGAATAGTTCCAATTTAATT+AGG | - | chr1.1:39981021-39981040 | None:intergenic | 25.0% |
| ! | TACATGTCTTAGAAATATTG+AGG | - | chr1.1:39979621-39979640 | None:intergenic | 25.0% |
| ! | TATAGCAAATGAGTTTATAG+CGG | + | chr1.1:39977988-39978007 | MS.gene97638:intron | 25.0% |
| ! | TCAATGTATTAATGAAACTG+AGG | + | chr1.1:39981310-39981329 | MS.gene97638:CDS | 25.0% |
| ! | TCTATAAGAATTGAAAACAG+AGG | - | chr1.1:39979015-39979034 | None:intergenic | 25.0% |
| ! | TCTATTTGCATATGTATCTT+GGG | - | chr1.1:39980710-39980729 | None:intergenic | 25.0% |
| ! | TGAATAATAGAATTATCGGA+AGG | - | chr1.1:39977698-39977717 | None:intergenic | 25.0% |
| ! | TGGTTATATGTATTGGATAA+TGG | + | chr1.1:39979169-39979188 | MS.gene97638:intron | 25.0% |
| ! | TTATAAATCCCATTTGGATT+AGG | - | chr1.1:39978249-39978268 | None:intergenic | 25.0% |
| ! | TTGAAATGAATAATAGGGTA+TGG | - | chr1.1:39977779-39977798 | None:intergenic | 25.0% |
| ! | TTGATGTCCAAAATCTTTAA+GGG | + | chr1.1:39978851-39978870 | MS.gene97638:intron | 25.0% |
| ! | TTTAGTCTAACAAAGATACA+TGG | - | chr1.1:39978920-39978939 | None:intergenic | 25.0% |
| !! | GAACCTAATCTCAATTTTAA+AGG | - | chr1.1:39977819-39977838 | None:intergenic | 25.0% |
| !! | GAAGATTTTGTTGAAATTGA+AGG | - | chr1.1:39977722-39977741 | None:intergenic | 25.0% |
| !! | GTTTTGTGACCTAATTAAAT+TGG | + | chr1.1:39981009-39981028 | MS.gene97638:intron | 25.0% |
| !! | TAGCTAGTTTATAACTGATA+AGG | + | chr1.1:39978024-39978043 | MS.gene97638:intron | 25.0% |
| !!! | AATATTTCTAAGACATGTAG+AGG | + | chr1.1:39979622-39979641 | MS.gene97638:intron | 25.0% |
| !!! | AGTGATTGGTCTTTAAATAT+TGG | - | chr1.1:39979708-39979727 | None:intergenic | 25.0% |
| !!! | CCTCATCTTTTTTATCTATT+GGG | - | chr1.1:39979926-39979945 | None:intergenic | 25.0% |
| !!! | TGTCCTTTAAAATTGAGATT+AGG | + | chr1.1:39977813-39977832 | MS.gene97638:intron | 25.0% |
| !!! | TGTTTCTAAGATGATACAAA+TGG | - | chr1.1:39979048-39979067 | None:intergenic | 25.0% |
| !!! | TTTCAACCTAGTTTTTGATA+TGG | + | chr1.1:39980598-39980617 | MS.gene97638:intron | 25.0% |
| AAAAGCCACAATTCATTACA+GGG | + | chr1.1:39981042-39981061 | MS.gene97638:intron | 30.0% | |
| AAGATTAGAGGGGTAAAATT+AGG | + | chr1.1:39978348-39978367 | MS.gene97638:intron | 30.0% | |
| AAGTTCAAATGCTTAACATG+AGG | - | chr1.1:39978986-39979005 | None:intergenic | 30.0% | |
| AATTGCATTAGAAGACATCA+AGG | - | chr1.1:39979802-39979821 | None:intergenic | 30.0% | |
| AGAAAGAAAGCAAATACAAG+AGG | + | chr1.1:39980115-39980134 | MS.gene97638:CDS | 30.0% | |
| AGCAATACTTAATGCTCTTT+GGG | - | chr1.1:39979874-39979893 | None:intergenic | 30.0% | |
| ATCTGATATAGCTATTAGCT+AGG | + | chr1.1:39978790-39978809 | MS.gene97638:intron | 30.0% | |
| ATTCGTAACCAATTCAAACA+TGG | - | chr1.1:39981256-39981275 | None:intergenic | 30.0% | |
| ATTGGTTACGAATTTGACTA+TGG | + | chr1.1:39981263-39981282 | MS.gene97638:intron | 30.0% | |
| ATTTAAGCTTCTCAAACAGA+TGG | + | chr1.1:39980190-39980209 | MS.gene97638:CDS | 30.0% | |
| ATTTGACTATGGAAGTGAAA+TGG | + | chr1.1:39981274-39981293 | MS.gene97638:intron | 30.0% | |
| CAATTAAGCCTAATCCAAAT+GGG | + | chr1.1:39978238-39978257 | MS.gene97638:intron | 30.0% | |
| CAGAAATCTGCATATTAACA+AGG | - | chr1.1:39980016-39980035 | None:intergenic | 30.0% | |
| CATTGAACAAACATTGTCTA+CGG | - | chr1.1:39979348-39979367 | None:intergenic | 30.0% | |
| CCCAATAGATAAAAAAGATG+AGG | + | chr1.1:39979923-39979942 | MS.gene97638:intron | 30.0% | |
| GATACATATGCAAATAGACA+TGG | + | chr1.1:39980712-39980731 | MS.gene97638:intron | 30.0% | |
| GTCTATTTGCATATGTATCT+TGG | - | chr1.1:39980711-39980730 | None:intergenic | 30.0% | |
| GTTATCATCATCTTGTTCTT+CGG | - | chr1.1:39977642-39977661 | None:intergenic | 30.0% | |
| TCAATTAAGCCTAATCCAAA+TGG | + | chr1.1:39978237-39978256 | MS.gene97638:intron | 30.0% | |
| TCTGATATAGCTATTAGCTA+GGG | + | chr1.1:39978791-39978810 | MS.gene97638:intron | 30.0% | |
| TGATTCATACTGGAGAAATA+TGG | - | chr1.1:39981491-39981510 | None:intergenic | 30.0% | |
| TGTTAATTTCAACAAGGCAA+AGG | + | chr1.1:39980436-39980455 | MS.gene97638:CDS | 30.0% | |
| TTAAATCCAATGTTCGATTG+TGG | - | chr1.1:39980176-39980195 | None:intergenic | 30.0% | |
| TTAAATGTAACCACATTTGC+CGG | + | chr1.1:39978548-39978567 | MS.gene97638:intron | 30.0% | |
| TTCCGCAAGATTAAAAAAAG+TGG | + | chr1.1:39981078-39981097 | MS.gene97638:intron | 30.0% | |
| TTTAAGCTTCTCAAACAGAT+GGG | + | chr1.1:39980191-39980210 | MS.gene97638:CDS | 30.0% | |
| ! | TGAAAAACTGACTTAATGTG+TGG | - | chr1.1:39978715-39978734 | None:intergenic | 30.0% |
| ! | TGTAATGAATTGTGGCTTTT+GGG | - | chr1.1:39981042-39981061 | None:intergenic | 30.0% |
| ! | TTGGTAATCCATGTTTGAAT+TGG | + | chr1.1:39981245-39981264 | MS.gene97638:intron | 30.0% |
| !! | TTGAAACGTTTGATTTGGTT+AGG | + | chr1.1:39979377-39979396 | MS.gene97638:intron | 30.0% |
| !!! | CATGTACTGATCAACTTTTT+TGG | - | chr1.1:39979566-39979585 | None:intergenic | 30.0% |
| !!! | CCCTCATCTTTTTTATCTAT+TGG | - | chr1.1:39979927-39979946 | None:intergenic | 30.0% |
| !!! | GACCACTTTTTTTAATCTTG+CGG | - | chr1.1:39981083-39981102 | None:intergenic | 30.0% |
| AAACAACAGTTGAACCACTT+AGG | + | chr1.1:39979314-39979333 | MS.gene97638:intron | 35.0% | |
| AAAGTTGTAGAACCATAACC+TGG | - | chr1.1:39979274-39979293 | None:intergenic | 35.0% | |
| AAATCACAATCGACAGGAAA+AGG | + | chr1.1:39980342-39980361 | MS.gene97638:CDS | 35.0% | |
| ACTGAAATGAATCGTGATAG+CGG | - | chr1.1:39980800-39980819 | None:intergenic | 35.0% | |
| AGAGGAAGAAATAACAGAAG+AGG | + | chr1.1:39980538-39980557 | MS.gene97638:CDS | 35.0% | |
| ATAAGCTCATGAGAAAGTGA+CGG | + | chr1.1:39978444-39978463 | MS.gene97638:intron | 35.0% | |
| ATGTCTGAATGCAGTAAACA+AGG | - | chr1.1:39981138-39981157 | None:intergenic | 35.0% | |
| CAAAAGCCACAATTCATTAC+AGG | + | chr1.1:39981041-39981060 | MS.gene97638:intron | 35.0% | |
| CATCAAGGTGAACCAAAAAA+CGG | - | chr1.1:39979787-39979806 | None:intergenic | 35.0% | |
| CGATTCATTTCAGTATCGTA+CGG | + | chr1.1:39980806-39980825 | MS.gene97638:intron | 35.0% | |
| CTGAATCAACAACATCTAAC+AGG | + | chr1.1:39977606-39977625 | MS.gene97638:CDS | 35.0% | |
| GAATCTGTAGTAGAAATCTG+CGG | + | chr1.1:39977885-39977904 | MS.gene97638:intron | 35.0% | |
| GAGCAATACTTAATGCTCTT+TGG | - | chr1.1:39979875-39979894 | None:intergenic | 35.0% | |
| GATACTTACTACCATGAACA+AGG | - | chr1.1:39980688-39980707 | None:intergenic | 35.0% | |
| GGCAAATGTGGTTACATTTA+AGG | - | chr1.1:39978549-39978568 | None:intergenic | 35.0% | |
| GTGCTTGGATTAAGCTTATT+TGG | + | chr1.1:39978060-39978079 | MS.gene97638:intron | 35.0% | |
| TAATCTTGCGGAAAGTTGTA+AGG | - | chr1.1:39981071-39981090 | None:intergenic | 35.0% | |
| TTCGGTTGAAACGTTTGATT+TGG | + | chr1.1:39979372-39979391 | MS.gene97638:intron | 35.0% | |
| ! | AAGTAGGCCCTTAAAGATTT+TGG | - | chr1.1:39978861-39978880 | None:intergenic | 35.0% |
| ! | CTGTAATGAATTGTGGCTTT+TGG | - | chr1.1:39981043-39981062 | None:intergenic | 35.0% |
| ! | GAAAGCTTGTGTGTGATTTT+TGG | - | chr1.1:39980635-39980654 | None:intergenic | 35.0% |
| ! | TGATGATAACGATGACTACA+TGG | + | chr1.1:39977652-39977671 | MS.gene97638:CDS | 35.0% |
| !! | AGTTTTTCGCGTTTTTTACG+CGG | + | chr1.1:39980893-39980912 | MS.gene97638:intron | 35.0% |
| !! | GTTCAACTGTTGTTTCATCT+TGG | - | chr1.1:39979309-39979328 | None:intergenic | 35.0% |
| !! | TGTTCGACTAGCTTATAAAC+AGG | + | chr1.1:39978286-39978305 | MS.gene97638:intron | 35.0% |
| !!! | GCTAGTTTTTTCCTTGTTCA+TGG | + | chr1.1:39980674-39980693 | MS.gene97638:intron | 35.0% |
| AAGCTCTTAACTGGCAAGAA+CGG | + | chr1.1:39980078-39980097 | MS.gene97638:CDS | 40.0% | |
| AAGGACATGGTAGTCAAATC+GGG | - | chr1.1:39981119-39981138 | None:intergenic | 40.0% | |
| ACAAGAGGATGAACAAACCT+TGG | + | chr1.1:39980130-39980149 | MS.gene97638:CDS | 40.0% | |
| AGATACATGGCACATCAAGT+AGG | - | chr1.1:39978877-39978896 | None:intergenic | 40.0% | |
| AGGCAACAGTCGAAAGAATT+TGG | - | chr1.1:39979436-39979455 | None:intergenic | 40.0% | |
| ATTGGAGAATCGGGAAATTG+TGG | + | chr1.1:39980472-39980491 | MS.gene97638:CDS | 40.0% | |
| CAAGGACATGGTAGTCAAAT+CGG | - | chr1.1:39981120-39981139 | None:intergenic | 40.0% | |
| CAATTTCCCGATTCTCCAAT+TGG | - | chr1.1:39980472-39980491 | None:intergenic | 40.0% | |
| CCAATACCACAATCGAACAT+TGG | + | chr1.1:39980167-39980186 | MS.gene97638:CDS | 40.0% | |
| CCAATGTTCGATTGTGGTAT+TGG | - | chr1.1:39980170-39980189 | None:intergenic | 40.0% | |
| CCACAAGGAGAAGAAGAAAA+GGG | + | chr1.1:39980316-39980335 | MS.gene97638:CDS | 40.0% | |
| CGAAAAACTGGATTTCTACC+GGG | - | chr1.1:39980882-39980901 | None:intergenic | 40.0% | |
| CGTGCATCTAGAAGTGATTA+AGG | + | chr1.1:39977924-39977943 | MS.gene97638:intron | 40.0% | |
| CTACGGTTTAGTTACCTAAG+TGG | - | chr1.1:39979331-39979350 | None:intergenic | 40.0% | |
| CTATTAGCTAGGGACTAAAC+TGG | + | chr1.1:39978801-39978820 | MS.gene97638:intron | 40.0% | |
| GAAGTGATTAAGGCTCTGTT+TGG | + | chr1.1:39977934-39977953 | MS.gene97638:intron | 40.0% | |
| GAATGCAGTAAACAAGGACA+TGG | - | chr1.1:39981132-39981151 | None:intergenic | 40.0% | |
| GAGGATGAGGCAACATTTAT+TGG | + | chr1.1:39979641-39979660 | MS.gene97638:intron | 40.0% | |
| GCAACGCTTCTTTGTATTCT+AGG | + | chr1.1:39980969-39980988 | MS.gene97638:intron | 40.0% | |
| GCCAATTGAAAGCTCTTAAC+TGG | + | chr1.1:39980069-39980088 | MS.gene97638:CDS | 40.0% | |
| GCCAGTTAAGAGCTTTCAAT+TGG | - | chr1.1:39980073-39980092 | None:intergenic | 40.0% | |
| GCGAAAAACTGGATTTCTAC+CGG | - | chr1.1:39980883-39980902 | None:intergenic | 40.0% | |
| GCGTAAAAAACGCGAAAAAC+TGG | - | chr1.1:39980894-39980913 | None:intergenic | 40.0% | |
| GGTGTAAGTTAATGTGTGCT+TGG | + | chr1.1:39978045-39978064 | MS.gene97638:intron | 40.0% | |
| GTGAACCAAAAAACGGTCTT+CGG | - | chr1.1:39979780-39979799 | None:intergenic | 40.0% | |
| TATGGAAGTGAAATGGATGC+AGG | + | chr1.1:39981281-39981300 | MS.gene97638:intron | 40.0% | |
| TGAACAAACCTTGGCAAAAG+TGG | + | chr1.1:39980139-39980158 | MS.gene97638:CDS | 40.0% | |
| TTCAATTACTGCCTCTTCTG+TGG | + | chr1.1:39981339-39981358 | MS.gene97638:CDS | 40.0% | |
| ! | AAGAGCTTTCAATTGGCTCT+TGG | - | chr1.1:39980066-39980085 | None:intergenic | 40.0% |
| ! | AGGTTCTGATGGAAGAATTC+GGG | + | chr1.1:39980375-39980394 | MS.gene97638:CDS | 40.0% |
| ! | CAGGTTCTGATGGAAGAATT+CGG | + | chr1.1:39980374-39980393 | MS.gene97638:CDS | 40.0% |
| ! | CCTTTTCTTCTTCTCCTTGT+GGG | - | chr1.1:39980318-39980337 | None:intergenic | 40.0% |
| ! | CTCTTGGAAGAGTTGATTGA+AGG | - | chr1.1:39980050-39980069 | None:intergenic | 40.0% |
| ! | CTGAAGTGTCACTGATTGAT+AGG | + | chr1.1:39978627-39978646 | MS.gene97638:intron | 40.0% |
| ! | CTTTTCTTCTTCTCCTTGTG+GGG | - | chr1.1:39980317-39980336 | None:intergenic | 40.0% |
| ! | TCTAAGACATGTAGAGGATG+AGG | + | chr1.1:39979628-39979647 | MS.gene97638:intron | 40.0% |
| !! | AAACAGATGGGTTATACACC+AGG | + | chr1.1:39980203-39980222 | MS.gene97638:CDS | 40.0% |
| !! | CAGTGGGTATTGAAATTCGA+CGG | + | chr1.1:39980264-39980283 | MS.gene97638:CDS | 40.0% |
| !! | GGTCATCTTCATTGATTCCA+GGG | - | chr1.1:39981537-39981556 | None:intergenic | 40.0% |
| !! | GTTTTTCGCGTTTTTTACGC+GGG | + | chr1.1:39980894-39980913 | MS.gene97638:intron | 40.0% |
| !! | TGGTCATCTTCATTGATTCC+AGG | - | chr1.1:39981538-39981557 | None:intergenic | 40.0% |
| AAAGGCTACGCTTGACCAAT+TGG | + | chr1.1:39980454-39980473 | MS.gene97638:CDS | 45.0% | |
| AAGAACGAGGATGATGCTGA+GGG | + | chr1.1:39980503-39980522 | MS.gene97638:CDS | 45.0% | |
| ACTACATGGCTGACCTTTCT+AGG | + | chr1.1:39977666-39977685 | MS.gene97638:CDS | 45.0% | |
| AGTAATTCACGGCTCATGAG+TGG | - | chr1.1:39979087-39979106 | None:intergenic | 45.0% | |
| CAAGGAGAAGAAGAAAAGGG+AGG | + | chr1.1:39980319-39980338 | MS.gene97638:CDS | 45.0% | |
| CCCACAAGGAGAAGAAGAAA+AGG | + | chr1.1:39980315-39980334 | MS.gene97638:CDS | 45.0% | |
| CGCAAATGAGCTTGTATTGC+TGG | + | chr1.1:39980758-39980777 | MS.gene97638:intron | 45.0% | |
| CGCTTGACCAATTGGAGAAT+CGG | + | chr1.1:39980462-39980481 | MS.gene97638:CDS | 45.0% | |
| CGGAAGGAAGAAACCTAGAA+AGG | - | chr1.1:39977682-39977701 | None:intergenic | 45.0% | |
| CGTCGAATTTCAATACCCAC+TGG | - | chr1.1:39980266-39980285 | None:intergenic | 45.0% | |
| GACATGGCCGATACATATCA+TGG | + | chr1.1:39980728-39980747 | MS.gene97638:intron | 45.0% | |
| GCTTGACCAATTGGAGAATC+GGG | + | chr1.1:39980463-39980482 | MS.gene97638:CDS | 45.0% | |
| GGAGACCCTGTAATGAATTG+TGG | - | chr1.1:39981050-39981069 | None:intergenic | 45.0% | |
| GGGCAGAACTTGATTCATAC+TGG | - | chr1.1:39981501-39981520 | None:intergenic | 45.0% | |
| GTAATTCACGGCTCATGAGT+GGG | - | chr1.1:39979086-39979105 | None:intergenic | 45.0% | |
| GTTGTAGAACCATAACCTGG+AGG | - | chr1.1:39979271-39979290 | None:intergenic | 45.0% | |
| TAATTCACGGCTCATGAGTG+GGG | - | chr1.1:39979085-39979104 | None:intergenic | 45.0% | |
| TCACTTTGCATCCACAGAAG+AGG | - | chr1.1:39981353-39981372 | None:intergenic | 45.0% | |
| TCAGCATCATCCTCGTTCTT+CGG | - | chr1.1:39980503-39980522 | None:intergenic | 45.0% | |
| TCGTTTCACCTGCAGATACT+GGG | + | chr1.1:39980843-39980862 | MS.gene97638:intron | 45.0% | |
| TGAATCAAGTTCTGCCCTTC+TGG | + | chr1.1:39981504-39981523 | MS.gene97638:CDS | 45.0% | |
| TGAGGGTGAAGATCAAGAAG+AGG | + | chr1.1:39980520-39980539 | MS.gene97638:CDS | 45.0% | |
| TGATGGAAGAATTCGGGTCA+AGG | + | chr1.1:39980381-39980400 | MS.gene97638:CDS | 45.0% | |
| ! | ACGGTCTTCGGTAGAGATTT+TGG | - | chr1.1:39979768-39979787 | None:intergenic | 45.0% |
| ! | CCCTTTTCTTCTTCTCCTTG+TGG | - | chr1.1:39980319-39980338 | None:intergenic | 45.0% |
| !! | GGTCTCATTGGTTCGATATC+CGG | - | chr1.1:39979250-39979269 | None:intergenic | 45.0% |
| !! | TACAAAGAAGCGTTGCAACC+CGG | - | chr1.1:39980965-39980984 | None:intergenic | 45.0% |
| !!! | CTCTACCGAAGACCGTTTTT+TGG | + | chr1.1:39979772-39979791 | MS.gene97638:intron | 45.0% |
| ACGCGGGTCAGTACTGTAAT+CGG | + | chr1.1:39980910-39980929 | MS.gene97638:intron | 50.0% | |
| AGAAGTCACGATGGCAGAGT+AGG | + | chr1.1:39980405-39980424 | MS.gene97638:CDS | 50.0% | |
| AGGTGAAACGAGCAAGTTGC+AGG | - | chr1.1:39980834-39980853 | None:intergenic | 50.0% | |
| ATCGAACCAATGAGACCTCC+AGG | + | chr1.1:39979253-39979272 | MS.gene97638:intron | 50.0% | |
| CAGGAAAAGGAAGAACGAGC+AGG | + | chr1.1:39980355-39980374 | MS.gene97638:CDS | 50.0% | |
| CCAATGAGACCTCCAGGTTA+TGG | + | chr1.1:39979259-39979278 | MS.gene97638:intron | 50.0% | |
| CCATAACCTGGAGGTCTCAT+TGG | - | chr1.1:39979262-39979281 | None:intergenic | 50.0% | |
| CTCGTTTCACCTGCAGATAC+TGG | + | chr1.1:39980842-39980861 | MS.gene97638:intron | 50.0% | |
| GAAGAACGAGGATGATGCTG+AGG | + | chr1.1:39980502-39980521 | MS.gene97638:CDS | 50.0% | |
| GGGAGGAAATCACAATCGAC+AGG | + | chr1.1:39980336-39980355 | MS.gene97638:CDS | 50.0% | |
| TATACACCAGGTTCTGCCCT+TGG | + | chr1.1:39980215-39980234 | MS.gene97638:CDS | 50.0% | |
| TCATGAGTGGGGAGGAGTTA+AGG | - | chr1.1:39979074-39979093 | None:intergenic | 50.0% | |
| TCCAGGGCAGTTATCCAGAA+GGG | - | chr1.1:39981521-39981540 | None:intergenic | 50.0% | |
| TGTGACCCACCAGAAATGAC+CGG | + | chr1.1:39980943-39980962 | MS.gene97638:intron | 50.0% | |
| TTCCAGGGCAGTTATCCAGA+AGG | - | chr1.1:39981522-39981541 | None:intergenic | 50.0% | |
| ! | GAAGAACGAGCAGGTTCTGA+TGG | + | chr1.1:39980364-39980383 | MS.gene97638:CDS | 50.0% |
| !! | TGGAGCTTCCACTTTTGCCA+AGG | - | chr1.1:39980150-39980169 | None:intergenic | 50.0% |
| ACGAGCAGGTATAGGCCTAG+AGG | + | chr1.1:39980289-39980308 | MS.gene97638:CDS | 55.0% | |
| AGGTTCTGCCCTTGGCAAAC+AGG | + | chr1.1:39980223-39980242 | MS.gene97638:CDS | 55.0% | |
| CAACCTGACCCAGTATCTGC+AGG | - | chr1.1:39980854-39980873 | None:intergenic | 55.0% | |
| CGACACAACACCGGCAAATG+TGG | - | chr1.1:39978561-39978580 | None:intergenic | 55.0% | |
| CGCGGGTCAGTACTGTAATC+GGG | + | chr1.1:39980911-39980930 | MS.gene97638:intron | 55.0% | |
| CGTTGCAACCCGGTCATTTC+TGG | - | chr1.1:39980955-39980974 | None:intergenic | 55.0% | |
| GAAATTCGACGGTCACGAGC+AGG | + | chr1.1:39980275-39980294 | MS.gene97638:CDS | 55.0% | |
| GCATCATCCTCGTTCTTCGG+TGG | - | chr1.1:39980500-39980519 | None:intergenic | 55.0% | |
| GGTCAAGGCAGAAGTCACGA+TGG | + | chr1.1:39980396-39980415 | MS.gene97638:CDS | 55.0% | |
| GGTTCTGCCCTTGGCAAACA+GGG | + | chr1.1:39980224-39980243 | MS.gene97638:CDS | 55.0% | |
| GTGACCCACCAGAAATGACC+GGG | + | chr1.1:39980944-39980963 | MS.gene97638:intron | 55.0% | |
| TCACCTGCAGATACTGGGTC+AGG | + | chr1.1:39980848-39980867 | MS.gene97638:intron | 55.0% | |
| TCTCCTTGTGGGGATCCTCT+AGG | - | chr1.1:39980307-39980326 | None:intergenic | 55.0% | |
| TGCCCTTGGCAAACAGGGAT+CGG | + | chr1.1:39980229-39980248 | MS.gene97638:CDS | 55.0% | |
| TGTGGAACCACCGAAGAACG+AGG | + | chr1.1:39980490-39980509 | MS.gene97638:CDS | 55.0% | |
| TGTTTGCCAAGGGCAGAACC+TGG | - | chr1.1:39980224-39980243 | None:intergenic | 55.0% | |
| ! | TGCAACCCGGTCATTTCTGG+TGG | - | chr1.1:39980952-39980971 | None:intergenic | 55.0% |
| !! | CCAGAGTGTCGACACAACAC+CGG | - | chr1.1:39978570-39978589 | None:intergenic | 55.0% |
| !! | GCAACCCGGTCATTTCTGGT+GGG | - | chr1.1:39980951-39980970 | None:intergenic | 55.0% |
| !! | GGTCATTTCTGGTGGGTCAC+AGG | - | chr1.1:39980944-39980963 | None:intergenic | 55.0% |
| AGGCCTAGAGGATCCCCACA+AGG | + | chr1.1:39980301-39980320 | MS.gene97638:CDS | 60.0% | |
| CGACGGTCACGAGCAGGTAT+AGG | + | chr1.1:39980281-39980300 | MS.gene97638:CDS | 60.0% | |
| GCCCGATCCCTGTTTGCCAA+GGG | - | chr1.1:39980234-39980253 | None:intergenic | 60.0% | |
| GCCCTTCTGGATAACTGCCC+TGG | + | chr1.1:39981517-39981536 | MS.gene97638:CDS | 60.0% | |
| GCCCTTGGCAAACAGGGATC+GGG | + | chr1.1:39980230-39980249 | MS.gene97638:CDS | 60.0% | |
| TGCCCGATCCCTGTTTGCCA+AGG | - | chr1.1:39980235-39980254 | None:intergenic | 60.0% | |
| TGGCAAACAGGGATCGGGCA+GGG | + | chr1.1:39980235-39980254 | MS.gene97638:CDS | 60.0% | |
| TTCACGGCTCATGAGTGGGG+AGG | - | chr1.1:39979082-39979101 | None:intergenic | 60.0% | |
| TTGGCAAACAGGGATCGGGC+AGG | + | chr1.1:39980234-39980253 | MS.gene97638:CDS | 60.0% | |
| !! | CCGGTGTTGTGTCGACACTC+TGG | + | chr1.1:39978567-39978586 | MS.gene97638:intron | 60.0% |
| ATCGGGCAGGGCTGAACCAG+TGG | + | chr1.1:39980247-39980266 | MS.gene97638:CDS | 65.0% | |
| TCGGGCAGGGCTGAACCAGT+GGG | + | chr1.1:39980248-39980267 | MS.gene97638:CDS | 65.0% | |
| ! | CTGGGTCAGGTTGCGTGACC+CGG | + | chr1.1:39980861-39980880 | MS.gene97638:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 39977599 | 39981561 | 39977599 | ID=MS.gene97638 |
| chr1.1 | mRNA | 39977599 | 39981561 | 39977599 | ID=MS.gene97638.t1;Parent=MS.gene97638 |
| chr1.1 | exon | 39977599 | 39977751 | 39977599 | ID=MS.gene97638.t1.exon1;Parent=MS.gene97638.t1 |
| chr1.1 | CDS | 39977599 | 39977751 | 39977599 | ID=cds.MS.gene97638.t1;Parent=MS.gene97638.t1 |
| chr1.1 | exon | 39980029 | 39980559 | 39980029 | ID=MS.gene97638.t1.exon2;Parent=MS.gene97638.t1 |
| chr1.1 | CDS | 39980029 | 39980559 | 39980029 | ID=cds.MS.gene97638.t1;Parent=MS.gene97638.t1 |
| chr1.1 | exon | 39981303 | 39981368 | 39981303 | ID=MS.gene97638.t1.exon3;Parent=MS.gene97638.t1 |
| chr1.1 | CDS | 39981303 | 39981368 | 39981303 | ID=cds.MS.gene97638.t1;Parent=MS.gene97638.t1 |
| chr1.1 | exon | 39981502 | 39981561 | 39981502 | ID=MS.gene97638.t1.exon4;Parent=MS.gene97638.t1 |
| chr1.1 | CDS | 39981502 | 39981561 | 39981502 | ID=cds.MS.gene97638.t1;Parent=MS.gene97638.t1 |
| Gene Sequence |
| Protein sequence |
