Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97647.t1 | XP_013455842.1 | 97.1 | 491 | 14 | 0 | 1 | 491 | 1 | 491 | 3.80E-275 | 956.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97647.t1 | Q93ZB9 | 61.1 | 489 | 189 | 1 | 1 | 489 | 5 | 492 | 2.2e-178 | 626.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97647.t1 | A0A072ULF3 | 97.1 | 491 | 14 | 0 | 1 | 491 | 1 | 491 | 2.8e-275 | 956.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene97647 | 0.832488 | 9.19E-56 | -1.69E-46 |
| MS.gene049350 | MS.gene97647 | 0.801973 | 6.99E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene97647 | 0.842268 | 2.87E-58 | -1.69E-46 |
| MS.gene049850 | MS.gene97647 | 0.805939 | 1.05E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene97647 | 0.802074 | 6.67E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene97647 | 0.800386 | 1.48E-48 | -1.69E-46 |
| MS.gene050562 | MS.gene97647 | 0.806845 | 6.75E-50 | -1.69E-46 |
| MS.gene050657 | MS.gene97647 | 0.802702 | 4.95E-49 | -1.69E-46 |
| MS.gene051201 | MS.gene97647 | 0.825606 | 4.28E-54 | -1.69E-46 |
| MS.gene051279 | MS.gene97647 | 0.81086 | 9.34E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene97647 | 0.800887 | 1.17E-48 | -1.69E-46 |
| MS.gene051744 | MS.gene97647 | 0.83098 | 2.16E-55 | -1.69E-46 |
| MS.gene052037 | MS.gene97647 | 0.807568 | 4.74E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene97647 | 0.81466 | 1.38E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene97647 | 0.81326 | 2.80E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene97647 | 0.825472 | 4.60E-54 | -1.69E-46 |
| MS.gene054576 | MS.gene97647 | 0.813316 | 2.72E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene97647 | 0.819641 | 1.04E-52 | -1.69E-46 |
| MS.gene054991 | MS.gene97647 | 0.830549 | 2.76E-55 | -1.69E-46 |
| MS.gene05539 | MS.gene97647 | 0.804072 | 2.57E-49 | -1.69E-46 |
| MS.gene055724 | MS.gene97647 | 0.814942 | 1.19E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene97647 | 0.84974 | 2.66E-60 | -1.69E-46 |
| MS.gene056308 | MS.gene97647 | 0.807354 | 5.27E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene97647 | 0.819951 | 8.87E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene97647 | 0.814969 | 1.18E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene97647 | 0.811121 | 8.20E-51 | -1.69E-46 |
| MS.gene058289 | MS.gene97647 | 0.815649 | 8.30E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene97647 | 0.812802 | 3.53E-51 | -1.69E-46 |
| MS.gene058862 | MS.gene97647 | 0.820439 | 6.86E-53 | -1.69E-46 |
| MS.gene059272 | MS.gene97647 | 0.812304 | 4.53E-51 | -1.69E-46 |
| MS.gene059439 | MS.gene97647 | 0.810976 | 8.82E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene97647 | 0.80321 | 3.89E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene97647 | 0.800738 | 1.25E-48 | -1.69E-46 |
| MS.gene05985 | MS.gene97647 | -0.813096 | 3.04E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene97647 | 0.803981 | 2.69E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97647.t1 | MTR_4g053785 | 97.149 | 491 | 14 | 0 | 1 | 491 | 1 | 491 | 0.0 | 978 |
| MS.gene97647.t1 | MTR_2g086090 | 72.653 | 490 | 133 | 1 | 2 | 491 | 4 | 492 | 0.0 | 761 |
| MS.gene97647.t1 | MTR_2g086070 | 69.654 | 491 | 149 | 0 | 1 | 491 | 1 | 491 | 0.0 | 727 |
| MS.gene97647.t1 | MTR_4g053880 | 68.980 | 490 | 152 | 0 | 2 | 491 | 3 | 492 | 0.0 | 726 |
| MS.gene97647.t1 | MTR_4g053900 | 48.485 | 495 | 251 | 2 | 1 | 491 | 1 | 495 | 4.27e-170 | 489 |
| MS.gene97647.t1 | MTR_4g054820 | 47.942 | 486 | 247 | 4 | 9 | 488 | 6 | 491 | 1.38e-169 | 487 |
| MS.gene97647.t1 | MTR_5g072540 | 45.859 | 495 | 261 | 4 | 1 | 491 | 1 | 492 | 1.79e-162 | 469 |
| MS.gene97647.t1 | MTR_5g045330 | 45.749 | 494 | 249 | 4 | 1 | 491 | 1 | 478 | 1.95e-155 | 451 |
| MS.gene97647.t1 | MTR_1g054635 | 40.200 | 500 | 274 | 9 | 6 | 491 | 120 | 608 | 4.26e-124 | 375 |
| MS.gene97647.t1 | MTR_6g034620 | 45.983 | 361 | 158 | 6 | 134 | 491 | 1 | 327 | 1.94e-108 | 325 |
| MS.gene97647.t1 | MTR_4g054220 | 50.542 | 277 | 134 | 1 | 9 | 282 | 6 | 282 | 3.16e-98 | 298 |
| MS.gene97647.t1 | MTR_5g072550 | 45.238 | 252 | 132 | 3 | 243 | 491 | 1 | 249 | 1.02e-73 | 233 |
| MS.gene97647.t1 | MTR_4g054240 | 43.602 | 211 | 118 | 1 | 282 | 491 | 20 | 230 | 2.71e-52 | 177 |
| MS.gene97647.t1 | MTR_6g039280 | 41.833 | 251 | 109 | 5 | 243 | 491 | 1 | 216 | 1.44e-49 | 169 |
| MS.gene97647.t1 | MTR_6g034660 | 51.163 | 129 | 63 | 0 | 1 | 129 | 1 | 129 | 5.40e-37 | 133 |
| MS.gene97647.t1 | MTR_3g034830 | 48.276 | 58 | 29 | 1 | 435 | 491 | 4 | 61 | 1.20e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97647.t1 | AT4G33790 | 61.020 | 490 | 190 | 1 | 1 | 490 | 5 | 493 | 0.0 | 640 |
| MS.gene97647.t1 | AT5G22500 | 52.857 | 490 | 227 | 3 | 4 | 491 | 3 | 490 | 0.0 | 543 |
| MS.gene97647.t1 | AT3G44540 | 52.041 | 490 | 233 | 2 | 4 | 491 | 3 | 492 | 0.0 | 543 |
| MS.gene97647.t1 | AT4G33790 | 60.686 | 379 | 148 | 1 | 112 | 490 | 3 | 380 | 3.70e-180 | 510 |
| MS.gene97647.t1 | AT3G44550 | 49.899 | 497 | 241 | 5 | 1 | 491 | 1 | 495 | 4.16e-177 | 506 |
| MS.gene97647.t1 | AT3G44560 | 49.493 | 493 | 242 | 4 | 5 | 491 | 4 | 495 | 2.59e-169 | 487 |
| MS.gene97647.t1 | AT5G22500 | 53.924 | 395 | 179 | 2 | 5 | 398 | 4 | 396 | 8.53e-157 | 451 |
| MS.gene97647.t1 | AT3G44560 | 50.113 | 441 | 216 | 3 | 5 | 442 | 4 | 443 | 1.50e-150 | 437 |
| MS.gene97647.t1 | AT3G44560 | 50.732 | 410 | 197 | 4 | 5 | 411 | 4 | 411 | 5.51e-140 | 409 |
| MS.gene97647.t1 | AT3G44550 | 48.062 | 387 | 195 | 3 | 110 | 491 | 1 | 386 | 2.54e-133 | 391 |
| MS.gene97647.t1 | AT3G44540 | 57.605 | 309 | 130 | 1 | 4 | 311 | 3 | 311 | 3.77e-131 | 383 |
| MS.gene97647.t1 | AT3G44540 | 57.605 | 309 | 130 | 1 | 4 | 311 | 3 | 311 | 3.77e-131 | 383 |
| MS.gene97647.t1 | AT3G11980 | 41.036 | 502 | 268 | 10 | 6 | 491 | 124 | 613 | 4.73e-125 | 378 |
| MS.gene97647.t1 | AT5G22420 | 46.995 | 366 | 189 | 4 | 114 | 478 | 5 | 366 | 3.83e-121 | 359 |
| MS.gene97647.t1 | AT5G22420 | 42.928 | 403 | 224 | 5 | 78 | 478 | 4 | 402 | 6.10e-116 | 347 |
| MS.gene97647.t1 | AT5G22420 | 50.617 | 81 | 29 | 2 | 5 | 75 | 4 | 83 | 3.06e-16 | 81.3 |
| MS.gene97647.t1 | AT5G22420 | 46.307 | 352 | 184 | 4 | 128 | 478 | 3 | 350 | 6.88e-114 | 340 |
| MS.gene97647.t1 | AT5G22420 | 46.307 | 352 | 184 | 4 | 128 | 478 | 3 | 350 | 6.88e-114 | 340 |
| MS.gene97647.t1 | AT3G56700 | 35.976 | 492 | 282 | 9 | 6 | 490 | 77 | 542 | 4.42e-99 | 309 |
| MS.gene97647.t1 | AT5G22420 | 44.304 | 316 | 171 | 4 | 164 | 478 | 4 | 315 | 1.17e-94 | 290 |
| MS.gene97647.t1 | AT5G22420 | 43.667 | 300 | 164 | 4 | 180 | 478 | 1 | 296 | 6.17e-88 | 272 |
| MS.gene97647.t1 | AT5G22420 | 43.667 | 300 | 164 | 4 | 180 | 478 | 1 | 296 | 6.17e-88 | 272 |
| MS.gene97647.t1 | AT3G56700 | 34.146 | 492 | 270 | 10 | 6 | 490 | 77 | 521 | 5.72e-87 | 277 |
Find 119 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCTACCTTCTTATGTTAA+AGG | 0.128083 | 4.4:-48846469 | MS.gene97647:intron |
| TAATCCATTCACACCATTTA+AGG | 0.138813 | 4.4:+48848734 | None:intergenic |
| TTGATCCCAAAGTGATTAAA+TGG | 0.144712 | 4.4:-48845248 | MS.gene97647:CDS |
| TATAGTGATCTTCAAGAATT+TGG | 0.161600 | 4.4:-48846603 | MS.gene97647:CDS |
| GATAGTTTAGCCGTAGCTTA+TGG | 0.264248 | 4.4:-48846888 | MS.gene97647:CDS |
| ATGCAGGTATGATATATCTT+TGG | 0.268511 | 4.4:-48849035 | MS.gene97647:intron |
| TGGTCTTATCTTGGAGAAAA+TGG | 0.274056 | 4.4:+48851755 | None:intergenic |
| CAAATCAGGGCAAAATTATA+TGG | 0.283252 | 4.4:-48847961 | MS.gene97647:intron |
| CACTTGGGCCACTCCTTAAA+TGG | 0.288402 | 4.4:-48848747 | MS.gene97647:CDS |
| TCTTAATCCCAAATGTATTT+AGG | 0.290851 | 4.4:+48849011 | None:intergenic |
| GTAACTTTACCAACTTTAAC+AGG | 0.313972 | 4.4:+48846534 | None:intergenic |
| TCTTTGGGCCTAAATACATT+TGG | 0.332272 | 4.4:-48849019 | MS.gene97647:CDS |
| AACAGAGGATGAAATTAAAA+TGG | 0.336208 | 4.4:-48848649 | MS.gene97647:CDS |
| ATCATCCCATTTAATCACTT+TGG | 0.337520 | 4.4:+48845242 | None:intergenic |
| GATATGTCCCTTGGAAATAC+TGG | 0.339025 | 4.4:+48846122 | None:intergenic |
| TCATCCCATTTAATCACTTT+GGG | 0.344489 | 4.4:+48845243 | None:intergenic |
| AAGGAGTGGCCCAAGTGATA+TGG | 0.346332 | 4.4:+48848753 | None:intergenic |
| TGATATATAGCATCGTTATT+AGG | 0.349661 | 4.4:+48846657 | None:intergenic |
| CTTTGGGCCTAAATACATTT+GGG | 0.357252 | 4.4:-48849018 | MS.gene97647:CDS |
| AGATAAAGCTTCTTAACATT+TGG | 0.358095 | 4.4:+48851554 | None:intergenic |
| ATAGTTTAGCCGTAGCTTAT+GGG | 0.386616 | 4.4:-48846887 | MS.gene97647:CDS |
| TGCAGGTATGATATATCTTT+GGG | 0.391257 | 4.4:-48849034 | MS.gene97647:intron |
| TGATTAAGATGGTCTTATCT+TGG | 0.396260 | 4.4:+48851746 | None:intergenic |
| CCTTTCCCTGGTTGGTCTGA+AGG | 0.399036 | 4.4:-48847820 | MS.gene97647:CDS |
| GCTAATACCCAAGTTCTTCA+TGG | 0.402415 | 4.4:+48848626 | None:intergenic |
| CAAGCCTTACTTGTTCTTCA+AGG | 0.405207 | 4.4:-48846050 | MS.gene97647:CDS |
| TAAAATGGCCATGAAGAACT+TGG | 0.408070 | 4.4:-48848634 | MS.gene97647:CDS |
| TGAAGATCACTATACATAAG+AGG | 0.410578 | 4.4:+48846612 | None:intergenic |
| GGAAAATTAACATGCTTCCT+TGG | 0.425648 | 4.4:-48846861 | MS.gene97647:CDS |
| GGACATTTCTCTTGAAGACT+TGG | 0.429707 | 4.4:-48849244 | MS.gene97647:CDS |
| TTTCCATCTTTGTTTATCCA+TGG | 0.431058 | 4.4:+48846558 | None:intergenic |
| TTCTCTTGAAGACTTGGGAT+TGG | 0.433303 | 4.4:-48849238 | MS.gene97647:CDS |
| ATCTTAATCACTGGTGCCAC+TGG | 0.436737 | 4.4:-48851733 | MS.gene97647:CDS |
| TTTGTGAATACGTATGTGTT+TGG | 0.438148 | 4.4:+48847934 | None:intergenic |
| ATTGGAAGATTCTATTCTAA+AGG | 0.439684 | 4.4:-48849220 | MS.gene97647:CDS |
| GGACATATCTTGATCTCAAA+AGG | 0.441132 | 4.4:-48846108 | MS.gene97647:CDS |
| ATTGTATGAGTTACAACAGC+TGG | 0.453716 | 4.4:-48848676 | MS.gene97647:CDS |
| GTTCTTGTGCATGTATCAAC+AGG | 0.464567 | 4.4:-48848950 | MS.gene97647:intron |
| CTACCAACCGCATAACAATC+TGG | 0.467571 | 4.4:+48846080 | None:intergenic |
| GGACTTGTTTAAATGTCTAA+AGG | 0.470373 | 4.4:-48849325 | MS.gene97647:CDS |
| TGATCCCAAAGTGATTAAAT+GGG | 0.471999 | 4.4:-48845247 | MS.gene97647:CDS |
| TGAAGAACTTGGGTATTAGC+AGG | 0.474532 | 4.4:-48848623 | MS.gene97647:intron |
| CTGGTTGGTCTGAAGGTGTA+AGG | 0.475279 | 4.4:-48847813 | MS.gene97647:intron |
| TTCTTGAACATTCACCTCCC+TGG | 0.476054 | 4.4:-48845216 | MS.gene97647:CDS |
| TAGAAACCTTTAACATAAGA+AGG | 0.482503 | 4.4:+48846463 | None:intergenic |
| AGAATGTATTTAACGACGCC+AGG | 0.483833 | 4.4:+48845198 | None:intergenic |
| TGAGATCAAGATATGTCCCT+TGG | 0.491540 | 4.4:+48846113 | None:intergenic |
| CTATACTGCTACAATGGAGT+TGG | 0.494470 | 4.4:-48851788 | None:intergenic |
| AATGCTTGTGGGGCAATTGA+AGG | 0.497064 | 4.4:-48847899 | MS.gene97647:CDS |
| TCAAAGAACCTTTCCCTGGT+TGG | 0.502477 | 4.4:-48847828 | MS.gene97647:CDS |
| TACGTATTCACAAAGGCAAT+GGG | 0.504053 | 4.4:-48847925 | MS.gene97647:CDS |
| ATGTGTGTGGGGAGGGAGAA+GGG | 0.507184 | 4.4:-48848791 | MS.gene97647:CDS |
| CACTCCTTAAATGGTGTGAA+TGG | 0.508798 | 4.4:-48848738 | MS.gene97647:CDS |
| ACGCCCTTGAAGAACAAGTA+AGG | 0.518384 | 4.4:+48846046 | None:intergenic |
| TAATTTCAGCATATGTGTGT+GGG | 0.518744 | 4.4:-48848803 | MS.gene97647:intron |
| AAGCCTTACTTGTTCTTCAA+GGG | 0.525598 | 4.4:-48846049 | MS.gene97647:CDS |
| GCACTTTGCCAGTATTTCCA+AGG | 0.525887 | 4.4:-48846130 | MS.gene97647:CDS |
| AAACCATGGATAAACAAAGA+TGG | 0.526126 | 4.4:-48846561 | MS.gene97647:CDS |
| TCAGCATATGTGTGTGGGGA+GGG | 0.526894 | 4.4:-48848798 | MS.gene97647:intron |
| GACATTTCTCTTGAAGACTT+GGG | 0.532213 | 4.4:-48849243 | MS.gene97647:CDS |
| TATACTGCTACAATGGAGTT+GGG | 0.533868 | 4.4:-48851787 | None:intergenic |
| GAATTCACCACCATGTCAGC+TGG | 0.534357 | 4.4:+48846714 | None:intergenic |
| GATAAGACCATCTTAATCAC+TGG | 0.534974 | 4.4:-48851742 | MS.gene97647:CDS |
| TATGTGTGTGGGGAGGGAGA+AGG | 0.538611 | 4.4:-48848792 | MS.gene97647:CDS |
| TTCTCATCGCTTTCACAATG+AGG | 0.543385 | 4.4:-48851501 | MS.gene97647:intron |
| GATGGAAAGCCTGTTAAAGT+TGG | 0.546337 | 4.4:-48846543 | MS.gene97647:CDS |
| ACATTCAAAGAACCTTTCCC+TGG | 0.552357 | 4.4:-48847832 | MS.gene97647:CDS |
| GAAAAGTTGACTCTAGTACC+AGG | 0.553432 | 4.4:-48849267 | MS.gene97647:CDS |
| TCAGGGCAAAATTATATGGA+TGG | 0.554758 | 4.4:-48847957 | MS.gene97647:intron |
| GATCCAGATTGTTATGCGGT+TGG | 0.558623 | 4.4:-48846083 | MS.gene97647:CDS |
| GACATTTCACAGCAAAACCA+TGG | 0.562023 | 4.4:-48846575 | MS.gene97647:CDS |
| GCAATGGGAGAAATGCTTGT+GGG | 0.565082 | 4.4:-48847910 | MS.gene97647:CDS |
| AACGATGCTATATATCATGT+TGG | 0.565095 | 4.4:-48846651 | MS.gene97647:CDS |
| TAATCAGATACCAGCTGACA+TGG | 0.568856 | 4.4:-48846724 | MS.gene97647:intron |
| AATGTACTAGTGACAATGGC+TGG | 0.569176 | 4.4:+48847850 | None:intergenic |
| CAAATACAAACTTTGATGAA+AGG | 0.569634 | 4.4:-48849155 | MS.gene97647:intron |
| CACTTTGCCAGTATTTCCAA+GGG | 0.570051 | 4.4:-48846129 | MS.gene97647:CDS |
| ATTAGAGAAACCATATCACT+TGG | 0.570492 | 4.4:-48848763 | MS.gene97647:CDS |
| ATGATTTGCATGAGCTACAA+TGG | 0.570741 | 4.4:+48846680 | None:intergenic |
| TGTTGACGTAGAAGAGAAAG+TGG | 0.570869 | 4.4:-48848709 | MS.gene97647:CDS |
| GGCAGCAAGACAAGGTGGGG+TGG | 0.572757 | 4.4:-48845289 | MS.gene97647:CDS |
| TTAGCCGTAGCTTATGGGAA+AGG | 0.575871 | 4.4:-48846882 | MS.gene97647:CDS |
| AAAATGGCCATGAAGAACTT+GGG | 0.577439 | 4.4:-48848633 | MS.gene97647:CDS |
| GAATACAGAGAAGTTGAGAA+TGG | 0.583212 | 4.4:-48845310 | MS.gene97647:CDS |
| ATGCTTGTGGGGCAATTGAA+GGG | 0.584939 | 4.4:-48847898 | MS.gene97647:CDS |
| AAAAGTTGACTCTAGTACCA+GGG | 0.593504 | 4.4:-48849266 | MS.gene97647:CDS |
| TTAATTTCAGCATATGTGTG+TGG | 0.594221 | 4.4:-48848804 | MS.gene97647:intron |
| TTGAGAATGGCAGCAAGACA+AGG | 0.597493 | 4.4:-48845297 | MS.gene97647:CDS |
| TGTTATGTAGATAATAGGGA+AGG | 0.597823 | 4.4:-48849346 | MS.gene97647:intron |
| TCTTAATGCAATTGTTGATG+TGG | 0.603354 | 4.4:-48846835 | MS.gene97647:intron |
| AATGGCAGCAAGACAAGGTG+GGG | 0.604900 | 4.4:-48845292 | MS.gene97647:CDS |
| CTTACACCTTCAGACCAACC+AGG | 0.605765 | 4.4:+48847814 | None:intergenic |
| GAATGGCAGCAAGACAAGGT+GGG | 0.605942 | 4.4:-48845293 | MS.gene97647:CDS |
| ATACGTATTCACAAAGGCAA+TGG | 0.606178 | 4.4:-48847926 | MS.gene97647:CDS |
| CCTTCAGACCAACCAGGGAA+AGG | 0.608114 | 4.4:+48847820 | None:intergenic |
| TTGTATGAGTTACAACAGCT+GGG | 0.613880 | 4.4:-48848675 | MS.gene97647:CDS |
| AGAATGGCAGCAAGACAAGG+TGG | 0.614006 | 4.4:-48845294 | MS.gene97647:CDS |
| AGTTACCGTGTTTAGCAACA+TGG | 0.614148 | 4.4:-48846517 | MS.gene97647:CDS |
| CATTCACACCATTTAAGGAG+TGG | 0.616794 | 4.4:+48848739 | None:intergenic |
| ACAACAGCTGGGAGCAACAG+AGG | 0.618223 | 4.4:-48848664 | MS.gene97647:CDS |
| TTACACCTTCAGACCAACCA+GGG | 0.619176 | 4.4:+48847815 | None:intergenic |
| AGTGGCACCAGTGATTAAGA+TGG | 0.623312 | 4.4:+48851735 | None:intergenic |
| GGTGGTGAATTCAATACTAG+TGG | 0.625469 | 4.4:-48846703 | MS.gene97647:CDS |
| TTTGAATGTACTAGTGACAA+TGG | 0.628163 | 4.4:+48847846 | None:intergenic |
| TCTTCAAGAGAAATGTCCCC+TGG | 0.629499 | 4.4:+48849249 | None:intergenic |
| AATTTCAGCATATGTGTGTG+GGG | 0.630245 | 4.4:-48848802 | MS.gene97647:intron |
| CAATGGGAGAAATGCTTGTG+GGG | 0.637488 | 4.4:-48847909 | MS.gene97647:CDS |
| GAATGTATTTAACGACGCCA+GGG | 0.637952 | 4.4:+48845199 | None:intergenic |
| GGCAATGGGAGAAATGCTTG+TGG | 0.643168 | 4.4:-48847911 | MS.gene97647:CDS |
| AGAACAAGTAAGGCTTGTAG+AGG | 0.643176 | 4.4:+48846056 | None:intergenic |
| TTCAGCATATGTGTGTGGGG+AGG | 0.651488 | 4.4:-48848799 | MS.gene97647:intron |
| GCTGTCCATGTTGCTAAACA+CGG | 0.661972 | 4.4:+48846512 | None:intergenic |
| TTAGAGAAACCATATCACTT+GGG | 0.677333 | 4.4:-48848762 | MS.gene97647:CDS |
| TGTATTTAACGACGCCAGGG+AGG | 0.686452 | 4.4:+48845202 | None:intergenic |
| GGAAGATCCAGATTGTTATG+CGG | 0.686875 | 4.4:-48846087 | MS.gene97647:CDS |
| AAAGTTGACTCTAGTACCAG+GGG | 0.697258 | 4.4:-48849265 | MS.gene97647:CDS |
| TCAGATACCAGCTGACATGG+TGG | 0.699544 | 4.4:-48846721 | MS.gene97647:intron |
| AAACACATACGTATTCACAA+AGG | 0.716346 | 4.4:-48847932 | MS.gene97647:CDS |
| CAATTGCATTAAGATCTCCA+AGG | 0.727973 | 4.4:+48846844 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTTTATAATTA+TGG | - | chr4.4:48848393-48848412 | MS.gene97647:intron | 0.0% |
| !! | AAAATTTCTACTTTAAATAA+GGG | + | chr4.4:48849800-48849819 | None:intergenic | 10.0% |
| !! | AAATTTGAAAATTATTTCAA+GGG | - | chr4.4:48849759-48849778 | MS.gene97647:intron | 10.0% |
| !! | AATATATACCTTTATATAAA+TGG | + | chr4.4:48845982-48846001 | None:intergenic | 10.0% |
| !! | AATTTAAATTCATATCATAA+TGG | - | chr4.4:48845818-48845837 | MS.gene97647:intron | 10.0% |
| !! | ATTAATGTAGAAATATAATT+AGG | + | chr4.4:48850189-48850208 | None:intergenic | 10.0% |
| !! | ATTTAAGTCATAAATTAAAA+TGG | - | chr4.4:48845880-48845899 | MS.gene97647:intron | 10.0% |
| !! | TAAAATTTCTACTTTAAATA+AGG | + | chr4.4:48849801-48849820 | None:intergenic | 10.0% |
| !!! | AACTATTTTTTTTTTTTTGA+GGG | - | chr4.4:48847152-48847171 | MS.gene97647:intron | 10.0% |
| !!! | AATAAATACTATTATTTTCA+TGG | + | chr4.4:48850166-48850185 | None:intergenic | 10.0% |
| !!! | ACAGTAATTTTAAAAAAAAT+TGG | - | chr4.4:48846088-48846107 | MS.gene97647:CDS | 10.0% |
| !!! | ACATATTATGATTTTTATTT+AGG | - | chr4.4:48848626-48848645 | MS.gene97647:CDS | 10.0% |
| !!! | TAACTATTTTTTTTTTTTTG+AGG | - | chr4.4:48847151-48847170 | MS.gene97647:intron | 10.0% |
| !!! | TGTTTTTTTTTTTTTTTTGA+GGG | - | chr4.4:48846595-48846614 | MS.gene97647:CDS | 10.0% |
| !!! | TTACGAATTTATATTTTTAA+GGG | - | chr4.4:48851360-48851379 | MS.gene97647:intron | 10.0% |
| !!! | TTACTATTAATATTTAAAGT+TGG | + | chr4.4:48849992-48850011 | None:intergenic | 10.0% |
| !! | AAAATTGAAGAGAATAATAT+TGG | + | chr4.4:48849716-48849735 | None:intergenic | 15.0% |
| !! | AAATCTCACTTAAAATTATT+GGG | + | chr4.4:48847375-48847394 | None:intergenic | 15.0% |
| !! | ACAATAAATTCAAAGTAAAT+TGG | - | chr4.4:48849462-48849481 | MS.gene97647:intron | 15.0% |
| !! | ACTTTATATTTCAAAAGATA+AGG | + | chr4.4:48847043-48847062 | None:intergenic | 15.0% |
| !! | AGAATAAAAAAAATCTACTT+TGG | + | chr4.4:48847867-48847886 | None:intergenic | 15.0% |
| !! | ATAGTTTCATTGATATATAA+GGG | + | chr4.4:48847473-48847492 | None:intergenic | 15.0% |
| !! | CAAATTTGAAAATTATTTCA+AGG | - | chr4.4:48849758-48849777 | MS.gene97647:intron | 15.0% |
| !! | CTTTATATTTCAAAAGATAA+GGG | + | chr4.4:48847042-48847061 | None:intergenic | 15.0% |
| !! | TAAAAAAATAAATTAGGTGT+GGG | + | chr4.4:48849566-48849585 | None:intergenic | 15.0% |
| !! | TAAATCTCACTTAAAATTAT+TGG | + | chr4.4:48847376-48847395 | None:intergenic | 15.0% |
| !! | TAGTTAAATCAATTTCTAAA+AGG | - | chr4.4:48851547-48851566 | MS.gene97647:CDS | 15.0% |
| !! | TATAGTTTCATTGATATATA+AGG | + | chr4.4:48847474-48847493 | None:intergenic | 15.0% |
| !! | TATTATATTGTGGAAAAATA+CGG | - | chr4.4:48850605-48850624 | MS.gene97647:intron | 15.0% |
| !! | TTCAAAATAAAAATATTGCA+AGG | + | chr4.4:48848109-48848128 | None:intergenic | 15.0% |
| !! | TTTATTTACCTAAAAATTTG+AGG | - | chr4.4:48849965-48849984 | MS.gene97647:intron | 15.0% |
| !!! | AAATATTATTTCTCTTTAAG+TGG | - | chr4.4:48845753-48845772 | MS.gene97647:intron | 15.0% |
| !!! | AAATTTTATTCCATTTCTTT+CGG | - | chr4.4:48847677-48847696 | MS.gene97647:intron | 15.0% |
| !!! | ATTTAACTAATTTTTAATCG+AGG | + | chr4.4:48849392-48849411 | None:intergenic | 15.0% |
| !!! | ATTTTGTTATGTAGATAATA+GGG | - | chr4.4:48847616-48847635 | MS.gene97647:intron | 15.0% |
| !!! | CAAATTTAAATTAGACTTTT+AGG | + | chr4.4:48846507-48846526 | None:intergenic | 15.0% |
| !!! | CTTACGAATTTATATTTTTA+AGG | - | chr4.4:48851359-48851378 | MS.gene97647:intron | 15.0% |
| !!! | CTTGAAATAATTTTCAAATT+TGG | + | chr4.4:48849760-48849779 | None:intergenic | 15.0% |
| !!! | CTTTATTTGAAATTTTTACA+AGG | - | chr4.4:48850744-48850763 | MS.gene97647:intron | 15.0% |
| !!! | GAAAGTACAAAATATAAATT+TGG | + | chr4.4:48845524-48845543 | None:intergenic | 15.0% |
| !!! | GCAATATTTTTATTTTGAAA+GGG | - | chr4.4:48848110-48848129 | MS.gene97647:intron | 15.0% |
| !!! | GTGTTTTTTTTTTTTTTTTG+AGG | - | chr4.4:48846594-48846613 | MS.gene97647:CDS | 15.0% |
| !!! | TAATATTTTTCCTAACTTTT+GGG | + | chr4.4:48848081-48848100 | None:intergenic | 15.0% |
| !!! | TATTTTGTTATGTAGATAAT+AGG | - | chr4.4:48847615-48847634 | MS.gene97647:intron | 15.0% |
| !!! | TGCAATATTTTTATTTTGAA+AGG | - | chr4.4:48848109-48848128 | MS.gene97647:intron | 15.0% |
| !!! | TTAATATTTTTCCTAACTTT+TGG | + | chr4.4:48848082-48848101 | None:intergenic | 15.0% |
| !!! | TTAGATAGTCATATTTATTT+TGG | - | chr4.4:48849326-48849345 | MS.gene97647:CDS | 15.0% |
| !!! | TTTTTTTATAATGACTTACA+TGG | - | chr4.4:48850550-48850569 | MS.gene97647:intron | 15.0% |
| !! | AAAAAACATAGACAAATTAG+AGG | + | chr4.4:48845287-48845306 | None:intergenic | 20.0% |
| !! | AAAAACATAGACAAATTAGA+GGG | + | chr4.4:48845286-48845305 | None:intergenic | 20.0% |
| !! | AAATGTCTAAAGGAAAAATT+AGG | - | chr4.4:48847651-48847670 | MS.gene97647:intron | 20.0% |
| !! | AACAACACCATATATAAATA+TGG | + | chr4.4:48846685-48846704 | None:intergenic | 20.0% |
| !! | AAGAAAAAAATTAGTGATCA+TGG | + | chr4.4:48850727-48850746 | None:intergenic | 20.0% |
| !! | AATATGTTTGATATCACAAT+AGG | - | chr4.4:48847067-48847086 | MS.gene97647:intron | 20.0% |
| !! | AATGTCTAAAGGAAAAATTA+GGG | - | chr4.4:48847652-48847671 | MS.gene97647:intron | 20.0% |
| !! | ATAAATTCAAAGTAAATTGG+TGG | - | chr4.4:48849465-48849484 | MS.gene97647:intron | 20.0% |
| !! | ATAATATGGTAAACAGAAAA+TGG | + | chr4.4:48847261-48847280 | None:intergenic | 20.0% |
| !! | ATATTATAGTACCATCTTTA+AGG | + | chr4.4:48845328-48845347 | None:intergenic | 20.0% |
| !! | ATCGATAAAATAAAAACAAG+TGG | - | chr4.4:48848678-48848697 | MS.gene97647:CDS | 20.0% |
| !! | ATTATTCAACTCATCAAAAT+CGG | + | chr4.4:48851505-48851524 | None:intergenic | 20.0% |
| !! | CATGTATTCCATTTATATAA+AGG | - | chr4.4:48845971-48845990 | MS.gene97647:intron | 20.0% |
| !! | CCAGTATTAATTGAAATTTA+AGG | + | chr4.4:48848941-48848960 | None:intergenic | 20.0% |
| !! | CCTTAAATTTCAATTAATAC+TGG | - | chr4.4:48848938-48848957 | MS.gene97647:intron | 20.0% |
| !! | CTAAACAATGTTTAGATATT+TGG | - | chr4.4:48848904-48848923 | MS.gene97647:intron | 20.0% |
| !! | CTACAACAAAATGATATATA+GGG | + | chr4.4:48846979-48846998 | None:intergenic | 20.0% |
| !! | GATAAAAATTGACATGAAAA+AGG | - | chr4.4:48845937-48845956 | MS.gene97647:intron | 20.0% |
| !! | GTAAAAAAATAAATTAGGTG+TGG | + | chr4.4:48849567-48849586 | None:intergenic | 20.0% |
| !! | GTATTAATTGAAATTTAAGG+TGG | + | chr4.4:48848938-48848957 | None:intergenic | 20.0% |
| !! | TAAATAGAAGAAAGCAATTT+AGG | - | chr4.4:48848827-48848846 | MS.gene97647:intron | 20.0% |
| !! | TAGTAATTTCTTAATACGTA+TGG | + | chr4.4:48845621-48845640 | None:intergenic | 20.0% |
| !! | TCTAATTAAATACTCTTAAG+TGG | - | chr4.4:48851008-48851027 | MS.gene97647:intron | 20.0% |
| !! | TCTACAACAAAATGATATAT+AGG | + | chr4.4:48846980-48846999 | None:intergenic | 20.0% |
| !! | TTATAAATGAAACGAACATT+AGG | - | chr4.4:48848708-48848727 | MS.gene97647:CDS | 20.0% |
| !! | TTCATTAATAGTTGAATTCT+TGG | + | chr4.4:48847128-48847147 | None:intergenic | 20.0% |
| !! | TTCATTGAGTAATTAATATC+AGG | - | chr4.4:48848778-48848797 | MS.gene97647:CDS | 20.0% |
| !!! | AATTCGAAAAAGTGTTTTTA+TGG | - | chr4.4:48848850-48848869 | MS.gene97647:intron | 20.0% |
| !!! | ATGCTGAAATTAATTTGTTA+AGG | + | chr4.4:48848155-48848174 | None:intergenic | 20.0% |
| !!! | ATTCGAAAAAGTGTTTTTAT+GGG | - | chr4.4:48848851-48848870 | MS.gene97647:intron | 20.0% |
| !!! | CATTTTTGAATCATTAACAA+GGG | - | chr4.4:48849895-48849914 | MS.gene97647:intron | 20.0% |
| !!! | GTAAATAGAAAATGATTTGT+GGG | + | chr4.4:48847202-48847221 | None:intergenic | 20.0% |
| !!! | TAAGAAAAGATTCCTTTTTT+AGG | - | chr4.4:48848755-48848774 | MS.gene97647:CDS | 20.0% |
| !!! | TAATACTGGTTTATGTTTTT+GGG | - | chr4.4:48848952-48848971 | MS.gene97647:CDS | 20.0% |
| !!! | TACTTTTTTAGAATTCTTGT+TGG | + | chr4.4:48851416-48851435 | None:intergenic | 20.0% |
| !!! | TCGTAATATAAATGATTTTG+TGG | + | chr4.4:48850684-48850703 | None:intergenic | 20.0% |
| !!! | TTAATACTGGTTTATGTTTT+TGG | - | chr4.4:48848951-48848970 | MS.gene97647:CDS | 20.0% |
| !!! | TTCTACTGATCAAATATTTT+TGG | - | chr4.4:48845696-48845715 | MS.gene97647:intron | 20.0% |
| !!! | TTTGATGAGTTGAATAATTA+GGG | - | chr4.4:48851507-48851526 | MS.gene97647:CDS | 20.0% |
| !!! | TTTGCTTTTTTTGTTTTGTT+TGG | - | chr4.4:48846946-48846965 | MS.gene97647:intron | 20.0% |
| !!! | TTTTGATGAGTTGAATAATT+AGG | - | chr4.4:48851506-48851525 | MS.gene97647:CDS | 20.0% |
| !!! | TTTTTTTTTTTTTTGAGGGA+AGG | - | chr4.4:48846599-48846618 | MS.gene97647:CDS | 20.0% |
| ! | AAAAAAATGCAGTAAACTCA+AGG | - | chr4.4:48847994-48848013 | MS.gene97647:intron | 25.0% |
| ! | AAAGTATATCTTAGATCCAT+TGG | - | chr4.4:48851430-48851449 | MS.gene97647:intron | 25.0% |
| ! | AAATTATTCATCCAAAGGAA+AGG | + | chr4.4:48849237-48849256 | None:intergenic | 25.0% |
| ! | AACAGAGGATGAAATTAAAA+TGG | - | chr4.4:48848317-48848336 | MS.gene97647:intron | 25.0% |
| ! | AAGGTACAATAATTATTGTG+AGG | + | chr4.4:48848136-48848155 | None:intergenic | 25.0% |
| ! | AAGTAATTACAAGGATTATG+TGG | + | chr4.4:48847224-48847243 | None:intergenic | 25.0% |
| ! | AAGTATATCTTAGATCCATT+GGG | - | chr4.4:48851431-48851450 | MS.gene97647:intron | 25.0% |
| ! | AATATAAATTCGTAAGACGA+TGG | + | chr4.4:48851355-48851374 | None:intergenic | 25.0% |
| ! | AATTAAATACTCTTAAGTGG+TGG | - | chr4.4:48851011-48851030 | MS.gene97647:intron | 25.0% |
| ! | AATTCAAATCTCATCTGAAA+CGG | + | chr4.4:48846164-48846183 | None:intergenic | 25.0% |
| ! | ACATTGTTTAGTAGAGTTTA+AGG | + | chr4.4:48848895-48848914 | None:intergenic | 25.0% |
| ! | ACCAGCTTATATATTAACTA+AGG | - | chr4.4:48847539-48847558 | MS.gene97647:intron | 25.0% |
| ! | ACCTTAGTTAATATATAAGC+TGG | + | chr4.4:48847543-48847562 | None:intergenic | 25.0% |
| ! | ACTTTATGAACAATCAAATC+AGG | - | chr4.4:48848991-48849010 | MS.gene97647:CDS | 25.0% |
| ! | AGACTAGATTGTATATATGT+TGG | + | chr4.4:48848470-48848489 | None:intergenic | 25.0% |
| ! | AGATAAAGCTTCTTAACATT+TGG | + | chr4.4:48845415-48845434 | None:intergenic | 25.0% |
| ! | ATATATCGTAGTTTAACTCA+AGG | - | chr4.4:48845915-48845934 | MS.gene97647:intron | 25.0% |
| ! | ATGTCTAAAGGAAAAATTAG+GGG | - | chr4.4:48847653-48847672 | MS.gene97647:intron | 25.0% |
| ! | ATTAAATACTCTTAAGTGGT+GGG | - | chr4.4:48851012-48851031 | MS.gene97647:intron | 25.0% |
| ! | ATTGGAAGATTCTATTCTAA+AGG | - | chr4.4:48847746-48847765 | MS.gene97647:intron | 25.0% |
| ! | ATTTGAGAAAGAGAAATGTT+AGG | - | chr4.4:48846562-48846581 | MS.gene97647:CDS | 25.0% |
| ! | CAAATACAAACTTTGATGAA+AGG | - | chr4.4:48847811-48847830 | MS.gene97647:intron | 25.0% |
| ! | CACAAACATCAATAAAAGTT+AGG | + | chr4.4:48850037-48850056 | None:intergenic | 25.0% |
| ! | CATATTTATCACCTAATACT+TGG | + | chr4.4:48851460-48851479 | None:intergenic | 25.0% |
| ! | CCTTGTTAATGATTCAAAAA+TGG | + | chr4.4:48849897-48849916 | None:intergenic | 25.0% |
| ! | CTTTATAAGGTAATTTAGCT+AGG | - | chr4.4:48851184-48851203 | MS.gene97647:intron | 25.0% |
| ! | CTTTATGAACAATCAAATCA+GGG | - | chr4.4:48848992-48849011 | MS.gene97647:CDS | 25.0% |
| ! | GATAAAATAAAAACAAGTGG+TGG | - | chr4.4:48848681-48848700 | MS.gene97647:CDS | 25.0% |
| ! | GCAAATGTAACAAAAAAAGA+AGG | - | chr4.4:48848576-48848595 | MS.gene97647:intron | 25.0% |
| ! | GGTAAATAGAAAATGATTTG+TGG | + | chr4.4:48847203-48847222 | None:intergenic | 25.0% |
| ! | GGTTATTGCAAATCTATTAT+TGG | - | chr4.4:48848597-48848616 | MS.gene97647:intron | 25.0% |
| ! | TAAATTACCTTATAAAGCGA+GGG | + | chr4.4:48851181-48851200 | None:intergenic | 25.0% |
| ! | TACAAAATATAAATTTGGCC+TGG | + | chr4.4:48845519-48845538 | None:intergenic | 25.0% |
| ! | TACTTTATGTACCTTAAAGA+TGG | - | chr4.4:48845314-48845333 | MS.gene97647:CDS | 25.0% |
| ! | TAGAAACCTTTAACATAAGA+AGG | + | chr4.4:48850506-48850525 | None:intergenic | 25.0% |
| ! | TAGTTAGGCATAAATGTATT+TGG | - | chr4.4:48846771-48846790 | MS.gene97647:intron | 25.0% |
| ! | TATAGTGATCTTCAAGAATT+TGG | - | chr4.4:48850363-48850382 | MS.gene97647:intron | 25.0% |
| ! | TCTTAATCCCAAATGTATTT+AGG | + | chr4.4:48847958-48847977 | None:intergenic | 25.0% |
| ! | TGATATATAGCATCGTTATT+AGG | + | chr4.4:48850312-48850331 | None:intergenic | 25.0% |
| ! | TTAAATTGCGGTCATAATTA+TGG | - | chr4.4:48850575-48850594 | MS.gene97647:intron | 25.0% |
| ! | TTAAGAAATTACTACGTCTA+TGG | - | chr4.4:48845627-48845646 | MS.gene97647:intron | 25.0% |
| ! | TTAATACGTATGGATACAAA+GGG | + | chr4.4:48845611-48845630 | None:intergenic | 25.0% |
| ! | TTACTCAATGAACCTAAAAA+AGG | + | chr4.4:48848770-48848789 | None:intergenic | 25.0% |
| !! | AACAATTGATAACTTTCAAG+TGG | + | chr4.4:48849873-48849892 | None:intergenic | 25.0% |
| !! | ATATACAATCTAGTCTTCTA+TGG | - | chr4.4:48848474-48848493 | MS.gene97647:intron | 25.0% |
| !! | ATTAAGTTTGGCTAAGTTTT+AGG | - | chr4.4:48846354-48846373 | MS.gene97647:intron | 25.0% |
| !! | GTCATCGAATAAATTCATTT+TGG | + | chr4.4:48849694-48849713 | None:intergenic | 25.0% |
| !! | TGAAAGGTACAAAAAATATC+AGG | - | chr4.4:48847827-48847846 | MS.gene97647:CDS | 25.0% |
| !! | TTCCTTTGGATGAATAATTT+TGG | - | chr4.4:48849237-48849256 | MS.gene97647:CDS | 25.0% |
| !! | TTTAATTTCGTGTCTATATG+TGG | - | chr4.4:48849589-48849608 | MS.gene97647:intron | 25.0% |
| !!! | ACTTACATGGTTTTAAATTG+CGG | - | chr4.4:48850563-48850582 | MS.gene97647:intron | 25.0% |
| !!! | ATGAACGTTTTCTAAGATTT+TGG | - | chr4.4:48846794-48846813 | MS.gene97647:intron | 25.0% |
| !!! | CCATTTTTGAATCATTAACA+AGG | - | chr4.4:48849894-48849913 | MS.gene97647:intron | 25.0% |
| !!! | TAAGGCATTGTTTTTTTGTT+TGG | + | chr4.4:48848877-48848896 | None:intergenic | 25.0% |
| !!! | TCATATGTACTTTTTGCATT+TGG | - | chr4.4:48850789-48850808 | MS.gene97647:intron | 25.0% |
| !!! | TCTTTTCTTATATTTGAGAC+CGG | + | chr4.4:48848745-48848764 | None:intergenic | 25.0% |
| !!! | TGAACGTTTTCTAAGATTTT+GGG | - | chr4.4:48846795-48846814 | MS.gene97647:intron | 25.0% |
| !!! | TGAATTTTTGACAGTTTTGT+TGG | - | chr4.4:48845369-48845388 | MS.gene97647:intron | 25.0% |
| !!! | TTTGTTTCCTTTTGTTTGTA+GGG | - | chr4.4:48846906-48846925 | MS.gene97647:intron | 25.0% |
| !!! | TTTTCTAAGATTTTGGGAAT+GGG | - | chr4.4:48846801-48846820 | MS.gene97647:intron | 25.0% |
| !!! | TTTTGTTTCCTTTTGTTTGT+AGG | - | chr4.4:48846905-48846924 | MS.gene97647:intron | 25.0% |
| AAACACATACGTATTCACAA+AGG | - | chr4.4:48849034-48849053 | MS.gene97647:intron | 30.0% | |
| AAACCATGGATAAACAAAGA+TGG | - | chr4.4:48850405-48850424 | MS.gene97647:intron | 30.0% | |
| AAAGTTGAACATCAACTACA+TGG | + | chr4.4:48848501-48848520 | None:intergenic | 30.0% | |
| AAAGTTGAACATCAATCACA+TGG | + | chr4.4:48848420-48848439 | None:intergenic | 30.0% | |
| AACGATGCTATATATCATGT+TGG | - | chr4.4:48850315-48850334 | MS.gene97647:intron | 30.0% | |
| AAGTCATATCTCAAAAGAGA+GGG | + | chr4.4:48851131-48851150 | None:intergenic | 30.0% | |
| AATATGTGCACTTATGTACT+TGG | - | chr4.4:48845343-48845362 | MS.gene97647:intron | 30.0% | |
| ACTACGTCTATGGTTATTAT+CGG | - | chr4.4:48845637-48845656 | MS.gene97647:intron | 30.0% | |
| AGGAACGCCATATTTATATA+TGG | - | chr4.4:48846675-48846694 | MS.gene97647:CDS | 30.0% | |
| AGTAGCACTTGATTGAAATA+AGG | + | chr4.4:48849938-48849957 | None:intergenic | 30.0% | |
| ATCATCCCATTTAATCACTT+TGG | + | chr4.4:48851727-48851746 | None:intergenic | 30.0% | |
| ATGCAGGTATGATATATCTT+TGG | - | chr4.4:48847931-48847950 | MS.gene97647:CDS | 30.0% | |
| ATGCTTGAATAATAGCATCT+CGG | + | chr4.4:48851582-48851601 | None:intergenic | 30.0% | |
| ATTAGAGAAACCATATCACT+TGG | - | chr4.4:48848203-48848222 | MS.gene97647:intron | 30.0% | |
| CAAATCAGGGCAAAATTATA+TGG | - | chr4.4:48849005-48849024 | MS.gene97647:CDS | 30.0% | |
| CAATATCAATCCCAAAAGTT+AGG | - | chr4.4:48848068-48848087 | MS.gene97647:intron | 30.0% | |
| CAATGAAACTATATCAACAG+AGG | - | chr4.4:48847481-48847500 | MS.gene97647:intron | 30.0% | |
| CTAAATTACCTTATAAAGCG+AGG | + | chr4.4:48851182-48851201 | None:intergenic | 30.0% | |
| CTGACATCATCTAAGAATTT+GGG | + | chr4.4:48851241-48851260 | None:intergenic | 30.0% | |
| CTTAATACGTATGGATACAA+AGG | + | chr4.4:48845612-48845631 | None:intergenic | 30.0% | |
| GACCAAAATTATTCATCCAA+AGG | + | chr4.4:48849242-48849261 | None:intergenic | 30.0% | |
| GGGATAAACAAGTAATTACA+AGG | + | chr4.4:48847233-48847252 | None:intergenic | 30.0% | |
| GTAACTATGCATGGATAATA+TGG | + | chr4.4:48847275-48847294 | None:intergenic | 30.0% | |
| GTAACTTTACCAACTTTAAC+AGG | + | chr4.4:48850435-48850454 | None:intergenic | 30.0% | |
| GTTAGACCAACAAAAAATCT+AGG | - | chr4.4:48851071-48851090 | MS.gene97647:intron | 30.0% | |
| TAATCCATTCACACCATTTA+AGG | + | chr4.4:48848235-48848254 | None:intergenic | 30.0% | |
| TAATTACTTGTTTATCCCGT+AGG | - | chr4.4:48847235-48847254 | MS.gene97647:intron | 30.0% | |
| TAATTTCAGCATATGTGTGT+GGG | - | chr4.4:48848163-48848182 | MS.gene97647:intron | 30.0% | |
| TCATCCCATTTAATCACTTT+GGG | + | chr4.4:48851726-48851745 | None:intergenic | 30.0% | |
| TCTGACATCATCTAAGAATT+TGG | + | chr4.4:48851242-48851261 | None:intergenic | 30.0% | |
| TCTTAATGCAATTGTTGATG+TGG | - | chr4.4:48850131-48850150 | MS.gene97647:intron | 30.0% | |
| TGAAGATCACTATACATAAG+AGG | + | chr4.4:48850357-48850376 | None:intergenic | 30.0% | |
| TGATCCCAAAGTGATTAAAT+GGG | - | chr4.4:48851719-48851738 | MS.gene97647:CDS | 30.0% | |
| TGCAGGTATGATATATCTTT+GGG | - | chr4.4:48847932-48847951 | MS.gene97647:CDS | 30.0% | |
| TGGTGCAAGTTATTATATTG+TGG | - | chr4.4:48850595-48850614 | MS.gene97647:intron | 30.0% | |
| TGTGTCTCATCTATAAAGTT+CGG | + | chr4.4:48851331-48851350 | None:intergenic | 30.0% | |
| TGTTATGTAGATAATAGGGA+AGG | - | chr4.4:48847620-48847639 | MS.gene97647:intron | 30.0% | |
| TTAATTTCAGCATATGTGTG+TGG | - | chr4.4:48848162-48848181 | MS.gene97647:intron | 30.0% | |
| TTAGAGAAACCATATCACTT+GGG | - | chr4.4:48848204-48848223 | MS.gene97647:intron | 30.0% | |
| TTAGGATCACACAAATATGT+GGG | - | chr4.4:48848644-48848663 | MS.gene97647:CDS | 30.0% | |
| TTGATCCCAAAGTGATTAAA+TGG | - | chr4.4:48851718-48851737 | MS.gene97647:intron | 30.0% | |
| TTTCATATCCTCTATGACTT+AGG | + | chr4.4:48846386-48846405 | None:intergenic | 30.0% | |
| TTTGAATGTACTAGTGACAA+TGG | + | chr4.4:48849123-48849142 | None:intergenic | 30.0% | |
| TTTGTGAATACGTATGTGTT+TGG | + | chr4.4:48849035-48849054 | None:intergenic | 30.0% | |
| ! | AGTTGACTTAACATGTTTAG+AGG | - | chr4.4:48846253-48846272 | MS.gene97647:intron | 30.0% |
| ! | ATCATCTAAGAATTTGGGTT+GGG | + | chr4.4:48851236-48851255 | None:intergenic | 30.0% |
| ! | CAACAAAAAATCTAGGACAA+TGG | - | chr4.4:48851078-48851097 | MS.gene97647:intron | 30.0% |
| ! | CATCTGAAACGGTTAAAAAA+TGG | + | chr4.4:48846153-48846172 | None:intergenic | 30.0% |
| ! | GGACTTGTTTAAATGTCTAA+AGG | - | chr4.4:48847641-48847660 | MS.gene97647:intron | 30.0% |
| ! | TTTAGGATCACACAAATATG+TGG | - | chr4.4:48848643-48848662 | MS.gene97647:CDS | 30.0% |
| ! | TTTCCATCTTTGTTTATCCA+TGG | + | chr4.4:48850411-48850430 | None:intergenic | 30.0% |
| !! | AAGTTGGTCCTCAAATTTTT+AGG | + | chr4.4:48849976-48849995 | None:intergenic | 30.0% |
| !! | AATTCTTGGCTTGCAAAATA+AGG | + | chr4.4:48847114-48847133 | None:intergenic | 30.0% |
| !! | ATGTACTTTTTGCATTTGGT+AGG | - | chr4.4:48850793-48850812 | MS.gene97647:intron | 30.0% |
| !! | ATTCTTGGCTTGCAAAATAA+GGG | + | chr4.4:48847113-48847132 | None:intergenic | 30.0% |
| !! | TCTTAATTTGTATGTGCCAT+GGG | - | chr4.4:48848540-48848559 | MS.gene97647:intron | 30.0% |
| !! | TGAATTTGTTAATGTCTTGG+CGG | - | chr4.4:48849492-48849511 | MS.gene97647:intron | 30.0% |
| !! | TGATTAAGATGGTCTTATCT+TGG | + | chr4.4:48845223-48845242 | None:intergenic | 30.0% |
| !! | TGTACTTTTTGCATTTGGTA+GGG | - | chr4.4:48850794-48850813 | MS.gene97647:intron | 30.0% |
| !! | TGTTTGTGCTTGTTATTTAC+AGG | - | chr4.4:48850049-48850068 | MS.gene97647:intron | 30.0% |
| !! | TTCTTAATTTGTATGTGCCA+TGG | - | chr4.4:48848539-48848558 | MS.gene97647:intron | 30.0% |
| !!! | AAGTCAACTTTGCTTTTTTG+AGG | + | chr4.4:48846242-48846261 | None:intergenic | 30.0% |
| !!! | AGTCAACTTTGCTTTTTTGA+GGG | + | chr4.4:48846241-48846260 | None:intergenic | 30.0% |
| !!! | CATTGTCCTAGATTTTTTGT+TGG | + | chr4.4:48851080-48851099 | None:intergenic | 30.0% |
| !!! | GTTTTCTAAGATTTTGGGAA+TGG | - | chr4.4:48846800-48846819 | MS.gene97647:intron | 30.0% |
| !!! | TTGCTCTAGATTTTGATTTG+TGG | - | chr4.4:48849645-48849664 | MS.gene97647:intron | 30.0% |
| !!! | TTTTTTTTTTTGAGGGAAGG+TGG | - | chr4.4:48846602-48846621 | MS.gene97647:CDS | 30.0% |
| AAAATGGCCATGAAGAACTT+GGG | - | chr4.4:48848333-48848352 | MS.gene97647:intron | 35.0% | |
| AAAGATAAGGGCTTAGTCAT+CGG | + | chr4.4:48847030-48847049 | None:intergenic | 35.0% | |
| AAGCCTTACTTGTTCTTCAA+GGG | - | chr4.4:48850917-48850936 | MS.gene97647:intron | 35.0% | |
| AATCTCTCATGAACTCAAGT+AGG | - | chr4.4:48847349-48847368 | MS.gene97647:intron | 35.0% | |
| AATTTCAGCATATGTGTGTG+GGG | - | chr4.4:48848164-48848183 | MS.gene97647:intron | 35.0% | |
| ATACACTCGAAATTCACAGT+CGG | - | chr4.4:48850643-48850662 | MS.gene97647:intron | 35.0% | |
| ATACGTATTCACAAAGGCAA+TGG | - | chr4.4:48849040-48849059 | MS.gene97647:intron | 35.0% | |
| ATAGTTTAGCCGTAGCTTAT+GGG | - | chr4.4:48850079-48850098 | MS.gene97647:intron | 35.0% | |
| ATGCAATTGTTGATGTGGTA+AGG | - | chr4.4:48850136-48850155 | MS.gene97647:intron | 35.0% | |
| ATTCGTCGTTATCAAAACCT+AGG | - | chr4.4:48849523-48849542 | MS.gene97647:intron | 35.0% | |
| ATTGTATGAGTTACAACAGC+TGG | - | chr4.4:48848290-48848309 | MS.gene97647:intron | 35.0% | |
| ATTTCACGACAGTGCAATAT+AGG | + | chr4.4:48847297-48847316 | None:intergenic | 35.0% | |
| CAAGTCATATCTCAAAAGAG+AGG | + | chr4.4:48851132-48851151 | None:intergenic | 35.0% | |
| CAATTGCATTAAGATCTCCA+AGG | + | chr4.4:48850125-48850144 | None:intergenic | 35.0% | |
| CATCATCTAAGAATTTGGGT+TGG | + | chr4.4:48851237-48851256 | None:intergenic | 35.0% | |
| CTATTGCTAGCATGGTAATT+TGG | + | chr4.4:48846754-48846773 | None:intergenic | 35.0% | |
| CTCATCTTGACTGATTAAAC+CGG | - | chr4.4:48846408-48846427 | MS.gene97647:intron | 35.0% | |
| CTTTGGGCCTAAATACATTT+GGG | - | chr4.4:48847948-48847967 | MS.gene97647:CDS | 35.0% | |
| GAATACAGAGAAGTTGAGAA+TGG | - | chr4.4:48851656-48851675 | MS.gene97647:intron | 35.0% | |
| GACATTTCTCTTGAAGACTT+GGG | - | chr4.4:48847723-48847742 | MS.gene97647:intron | 35.0% | |
| GATAAGACCATCTTAATCAC+TGG | - | chr4.4:48845224-48845243 | MS.gene97647:CDS | 35.0% | |
| GATATATCATACCTGCATAG+AGG | + | chr4.4:48847929-48847948 | None:intergenic | 35.0% | |
| GCAATATAGGTAACTATGCA+TGG | + | chr4.4:48847284-48847303 | None:intergenic | 35.0% | |
| GCTAGTTATGAATGTTTGTC+CGG | + | chr4.4:48846430-48846449 | None:intergenic | 35.0% | |
| GGAAAATTAACATGCTTCCT+TGG | - | chr4.4:48850105-48850124 | MS.gene97647:intron | 35.0% | |
| GGACATATCTTGATCTCAAA+AGG | - | chr4.4:48850858-48850877 | MS.gene97647:intron | 35.0% | |
| GTGTCTCATCTATAAAGTTC+GGG | + | chr4.4:48851330-48851349 | None:intergenic | 35.0% | |
| TAAAATGGCCATGAAGAACT+TGG | - | chr4.4:48848332-48848351 | MS.gene97647:intron | 35.0% | |
| TACGTATTCACAAAGGCAAT+GGG | - | chr4.4:48849041-48849060 | MS.gene97647:intron | 35.0% | |
| TCAGGGCAAAATTATATGGA+TGG | - | chr4.4:48849009-48849028 | MS.gene97647:CDS | 35.0% | |
| TCGCTACCTTCTTATGTTAA+AGG | - | chr4.4:48850497-48850516 | MS.gene97647:intron | 35.0% | |
| TCTTTGGGCCTAAATACATT+TGG | - | chr4.4:48847947-48847966 | MS.gene97647:CDS | 35.0% | |
| TGAGAAAGAGAAATGTTAGG+TGG | - | chr4.4:48846565-48846584 | MS.gene97647:CDS | 35.0% | |
| TGCATAGAGGTGAAAACAAA+AGG | + | chr4.4:48847916-48847935 | None:intergenic | 35.0% | |
| TGCTTGAATAATAGCATCTC+GGG | + | chr4.4:48851581-48851600 | None:intergenic | 35.0% | |
| TGGTTATTATCGGTGAAAGA+TGG | - | chr4.4:48845647-48845666 | MS.gene97647:intron | 35.0% | |
| TTACCATGCTAGCAATAGTT+AGG | - | chr4.4:48846756-48846775 | MS.gene97647:intron | 35.0% | |
| TTGTATGAGTTACAACAGCT+GGG | - | chr4.4:48848291-48848310 | MS.gene97647:intron | 35.0% | |
| ! | AAAAGTTGACTCTAGTACCA+GGG | - | chr4.4:48847700-48847719 | MS.gene97647:intron | 35.0% |
| ! | ATGATTTGCATGAGCTACAA+TGG | + | chr4.4:48850289-48850308 | None:intergenic | 35.0% |
| ! | CATAAGAGGTTTTCTAACAG+AGG | + | chr4.4:48850343-48850362 | None:intergenic | 35.0% |
| ! | GTCAACTTTTCCGAAAGAAA+TGG | + | chr4.4:48847690-48847709 | None:intergenic | 35.0% |
| ! | TCGTTTCCTAATGGGTAAAT+AGG | + | chr4.4:48849671-48849690 | None:intergenic | 35.0% |
| ! | TGATTTTGTGGTCTCCATAA+CGG | + | chr4.4:48850672-48850691 | None:intergenic | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | + | chr4.4:48848741-48848760 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | + | chr4.4:48848742-48848761 | None:intergenic | 35.0% |
| ! | TTTTCCTTTCCCATAAGCTA+CGG | + | chr4.4:48850091-48850110 | None:intergenic | 35.0% |
| !! | CATTTTGGTCGTTTCCTAAT+GGG | + | chr4.4:48849679-48849698 | None:intergenic | 35.0% |
| !! | TCATTTTGGTCGTTTCCTAA+TGG | + | chr4.4:48849680-48849699 | None:intergenic | 35.0% |
| !! | TGGTCTTATCTTGGAGAAAA+TGG | + | chr4.4:48845214-48845233 | None:intergenic | 35.0% |
| !! | TTTCCTTTTGTTTGTAGGGT+GGG | - | chr4.4:48846910-48846929 | MS.gene97647:intron | 35.0% |
| !!! | TAGGTTTTGATAACGACGAA+TGG | + | chr4.4:48849524-48849543 | None:intergenic | 35.0% |
| !!! | TGCTATAACGTTTTTTCCCA+TGG | + | chr4.4:48848559-48848578 | None:intergenic | 35.0% |
| !!! | TTTTGTTTTCACCTCTATGC+AGG | - | chr4.4:48847915-48847934 | MS.gene97647:CDS | 35.0% |
| AATGTACTAGTGACAATGGC+TGG | + | chr4.4:48849119-48849138 | None:intergenic | 40.0% | |
| ACATTAGGAATTACTCCCTC+CGG | - | chr4.4:48848723-48848742 | MS.gene97647:CDS | 40.0% | |
| ACATTCAAAGAACCTTTCCC+TGG | - | chr4.4:48849134-48849153 | MS.gene97647:intron | 40.0% | |
| AGAACAAGTAAGGCTTGTAG+AGG | + | chr4.4:48850913-48850932 | None:intergenic | 40.0% | |
| AGAATGTATTTAACGACGCC+AGG | + | chr4.4:48851771-48851790 | None:intergenic | 40.0% | |
| AGTTACCGTGTTTAGCAACA+TGG | - | chr4.4:48850449-48850468 | MS.gene97647:intron | 40.0% | |
| ATGCCTAACTATTGCTAGCA+TGG | + | chr4.4:48846762-48846781 | None:intergenic | 40.0% | |
| CAAGCCTTACTTGTTCTTCA+AGG | - | chr4.4:48850916-48850935 | MS.gene97647:intron | 40.0% | |
| CACTCCTTAAATGGTGTGAA+TGG | - | chr4.4:48848228-48848247 | MS.gene97647:intron | 40.0% | |
| CACTTTGCCAGTATTTCCAA+GGG | - | chr4.4:48850837-48850856 | MS.gene97647:intron | 40.0% | |
| CATTCACACCATTTAAGGAG+TGG | + | chr4.4:48848230-48848249 | None:intergenic | 40.0% | |
| CGGTTTAATCAGTCAAGATG+AGG | + | chr4.4:48846410-48846429 | None:intergenic | 40.0% | |
| GAATGTATTTAACGACGCCA+GGG | + | chr4.4:48851770-48851789 | None:intergenic | 40.0% | |
| GACATTTCACAGCAAAACCA+TGG | - | chr4.4:48850391-48850410 | MS.gene97647:intron | 40.0% | |
| GATAGTTTAGCCGTAGCTTA+TGG | - | chr4.4:48850078-48850097 | MS.gene97647:intron | 40.0% | |
| GATATGTCCCTTGGAAATAC+TGG | + | chr4.4:48850847-48850866 | None:intergenic | 40.0% | |
| GATGGAAAGCCTGTTAAAGT+TGG | - | chr4.4:48850423-48850442 | MS.gene97647:intron | 40.0% | |
| GCTAATACCCAAGTTCTTCA+TGG | + | chr4.4:48848343-48848362 | None:intergenic | 40.0% | |
| GGAAGATCCAGATTGTTATG+CGG | - | chr4.4:48850879-48850898 | MS.gene97647:intron | 40.0% | |
| GGACATTTCTCTTGAAGACT+TGG | - | chr4.4:48847722-48847741 | MS.gene97647:intron | 40.0% | |
| GGTAAACAGAAAATGGCCTA+CGG | + | chr4.4:48847254-48847273 | None:intergenic | 40.0% | |
| GGTGGTGAATTCAATACTAG+TGG | - | chr4.4:48850263-48850282 | MS.gene97647:intron | 40.0% | |
| GGTTCAAACCTAAGTCATAG+AGG | - | chr4.4:48846375-48846394 | MS.gene97647:intron | 40.0% | |
| GTAAACAGAAAATGGCCTAC+GGG | + | chr4.4:48847253-48847272 | None:intergenic | 40.0% | |
| GTTCTTGTGCATGTATCAAC+AGG | - | chr4.4:48848016-48848035 | MS.gene97647:intron | 40.0% | |
| TAATCAGATACCAGCTGACA+TGG | - | chr4.4:48850242-48850261 | MS.gene97647:intron | 40.0% | |
| TGAAGAACTTGGGTATTAGC+AGG | - | chr4.4:48848343-48848362 | MS.gene97647:intron | 40.0% | |
| TGAGATCAAGATATGTCCCT+TGG | + | chr4.4:48850856-48850875 | None:intergenic | 40.0% | |
| TGAGTTCATGAGAGATTACG+AGG | + | chr4.4:48847346-48847365 | None:intergenic | 40.0% | |
| TGTTGACGTAGAAGAGAAAG+TGG | - | chr4.4:48848257-48848276 | MS.gene97647:intron | 40.0% | |
| TTCTCATCGCTTTCACAATG+AGG | - | chr4.4:48845465-48845484 | MS.gene97647:intron | 40.0% | |
| TTCTCTTGAAGACTTGGGAT+TGG | - | chr4.4:48847728-48847747 | MS.gene97647:intron | 40.0% | |
| TTGTGGCCTATTTACCCATT+AGG | - | chr4.4:48849662-48849681 | MS.gene97647:intron | 40.0% | |
| TTTGTTAATGTCTTGGCGGT+CGG | - | chr4.4:48849496-48849515 | MS.gene97647:intron | 40.0% | |
| ! | AAAGTTGACTCTAGTACCAG+GGG | - | chr4.4:48847701-48847720 | MS.gene97647:intron | 40.0% |
| ! | ACTTTTAGCAAGAAAGCCAG+TGG | + | chr4.4:48845252-48845271 | None:intergenic | 40.0% |
| ! | CTGTGAATTTCGAGTGTATC+AGG | + | chr4.4:48850642-48850661 | None:intergenic | 40.0% |
| ! | GAAAAGTTGACTCTAGTACC+AGG | - | chr4.4:48847699-48847718 | MS.gene97647:intron | 40.0% |
| !! | GATTTTGGGAATGGGATAGT+AGG | - | chr4.4:48846809-48846828 | MS.gene97647:intron | 40.0% |
| !! | GTTTCCTTTTGTTTGTAGGG+TGG | - | chr4.4:48846909-48846928 | MS.gene97647:intron | 40.0% |
| AATGCTTGTGGGGCAATTGA+AGG | - | chr4.4:48849067-48849086 | MS.gene97647:intron | 45.0% | |
| ACGCCCTTGAAGAACAAGTA+AGG | + | chr4.4:48850923-48850942 | None:intergenic | 45.0% | |
| AGGCTAGAATTTGACCCAAG+TGG | - | chr4.4:48851204-48851223 | MS.gene97647:intron | 45.0% | |
| AGTGGCACCAGTGATTAAGA+TGG | + | chr4.4:48845234-48845253 | None:intergenic | 45.0% | |
| ATAACTCAGTGCTTTCTGCC+AGG | - | chr4.4:48845498-48845517 | MS.gene97647:intron | 45.0% | |
| ATGCTTGTGGGGCAATTGAA+GGG | - | chr4.4:48849068-48849087 | MS.gene97647:intron | 45.0% | |
| CAACCCACCCTACAAACAAA+AGG | + | chr4.4:48846916-48846935 | None:intergenic | 45.0% | |
| CAATGGGAGAAATGCTTGTG+GGG | - | chr4.4:48849057-48849076 | MS.gene97647:intron | 45.0% | |
| CCATTGGGTCACCAAGTATT+AGG | - | chr4.4:48851446-48851465 | MS.gene97647:intron | 45.0% | |
| CTACCAACCGCATAACAATC+TGG | + | chr4.4:48850889-48850908 | None:intergenic | 45.0% | |
| GAGACATCCCTCGCTTTATA+AGG | - | chr4.4:48851171-48851190 | MS.gene97647:intron | 45.0% | |
| GATCCAGATTGTTATGCGGT+TGG | - | chr4.4:48850883-48850902 | MS.gene97647:intron | 45.0% | |
| GCAATGGGAGAAATGCTTGT+GGG | - | chr4.4:48849056-48849075 | MS.gene97647:intron | 45.0% | |
| GCACTTTGCCAGTATTTCCA+AGG | - | chr4.4:48850836-48850855 | MS.gene97647:intron | 45.0% | |
| GCTGTCCATGTTGCTAAACA+CGG | + | chr4.4:48850457-48850476 | None:intergenic | 45.0% | |
| GTCTGTCTTGACCTTTCCTT+TGG | - | chr4.4:48849223-48849242 | MS.gene97647:CDS | 45.0% | |
| GTGTCTATATGTGGATTCGC+TGG | - | chr4.4:48849598-48849617 | MS.gene97647:intron | 45.0% | |
| TCAAAGAACCTTTCCCTGGT+TGG | - | chr4.4:48849138-48849157 | MS.gene97647:intron | 45.0% | |
| TCATTAGACTATCCGCTGTC+AGG | - | chr4.4:48851275-48851294 | MS.gene97647:intron | 45.0% | |
| TCTTCAAGAGAAATGTCCCC+TGG | + | chr4.4:48847720-48847739 | None:intergenic | 45.0% | |
| TTACACCTTCAGACCAACCA+GGG | + | chr4.4:48849154-48849173 | None:intergenic | 45.0% | |
| TTAGCCGTAGCTTATGGGAA+AGG | - | chr4.4:48850084-48850103 | MS.gene97647:intron | 45.0% | |
| TTCTTGAACATTCACCTCCC+TGG | - | chr4.4:48851750-48851769 | MS.gene97647:CDS | 45.0% | |
| TTGAGAATGGCAGCAAGACA+AGG | - | chr4.4:48851669-48851688 | MS.gene97647:intron | 45.0% | |
| ! | CCTAATACTTGGTGACCCAA+TGG | + | chr4.4:48851449-48851468 | None:intergenic | 45.0% |
| ! | TTGCTGACTGCATGTAGTCA+TGG | - | chr4.4:48845574-48845593 | MS.gene97647:intron | 45.0% |
| !! | ATCTTAATCACTGGTGCCAC+TGG | - | chr4.4:48845233-48845252 | MS.gene97647:CDS | 45.0% |
| !! | TTTGCTGGTGTTGTTGTAGG+TGG | - | chr4.4:48846872-48846891 | MS.gene97647:CDS | 45.0% |
| !!! | GGTTTTGCTGGTGTTGTTGT+AGG | - | chr4.4:48846869-48846888 | MS.gene97647:CDS | 45.0% |
| !! | AAAAATAAAATAATTAAGTT+TGG | - | chr4.4:48846342-48846361 | MS.gene97647:intron | 5.0% |
| !! | AAATTGTAAAAAAATAAATT+AGG | + | chr4.4:48849572-48849591 | None:intergenic | 5.0% |
| !!! | TATTTTATAATAAATGAAAA+AGG | + | chr4.4:48846303-48846322 | None:intergenic | 5.0% |
| !!! | TTTATTTATTTATTTTTGAA+AGG | - | chr4.4:48846655-48846674 | MS.gene97647:CDS | 5.0% |
| AAGGAGTGGCCCAAGTGATA+TGG | + | chr4.4:48848216-48848235 | None:intergenic | 50.0% | |
| AATGGCAGCAAGACAAGGTG+GGG | - | chr4.4:48851674-48851693 | MS.gene97647:intron | 50.0% | |
| AGAATGGCAGCAAGACAAGG+TGG | - | chr4.4:48851672-48851691 | MS.gene97647:intron | 50.0% | |
| AGCTCAATCCCAAGTGGACA+TGG | + | chr4.4:48846841-48846860 | None:intergenic | 50.0% | |
| ATCCGCTGTCAGGTCACTAA+GGG | - | chr4.4:48851285-48851304 | MS.gene97647:intron | 50.0% | |
| CACTTGGGCCACTCCTTAAA+TGG | - | chr4.4:48848219-48848238 | MS.gene97647:intron | 50.0% | |
| CTTACACCTTCAGACCAACC+AGG | + | chr4.4:48849155-48849174 | None:intergenic | 50.0% | |
| GAATGGCAGCAAGACAAGGT+GGG | - | chr4.4:48851673-48851692 | MS.gene97647:intron | 50.0% | |
| GAATTCACCACCATGTCAGC+TGG | + | chr4.4:48850255-48850274 | None:intergenic | 50.0% | |
| GATTCGCTGGATTGTGCTAG+AGG | - | chr4.4:48849611-48849630 | MS.gene97647:intron | 50.0% | |
| GGCAATGGGAGAAATGCTTG+TGG | - | chr4.4:48849055-48849074 | MS.gene97647:intron | 50.0% | |
| TATCCGCTGTCAGGTCACTA+AGG | - | chr4.4:48851284-48851303 | MS.gene97647:intron | 50.0% | |
| TCAGATACCAGCTGACATGG+TGG | - | chr4.4:48850245-48850264 | MS.gene97647:intron | 50.0% | |
| TCAGCATATGTGTGTGGGGA+GGG | - | chr4.4:48848168-48848187 | MS.gene97647:intron | 50.0% | |
| TCCACTTGGGATTGAGCTCT+GGG | - | chr4.4:48846843-48846862 | MS.gene97647:CDS | 50.0% | |
| TGTATTTAACGACGCCAGGG+AGG | + | chr4.4:48851767-48851786 | None:intergenic | 50.0% | |
| TTCACAGTCGGACACCGTTA+TGG | - | chr4.4:48850655-48850674 | MS.gene97647:intron | 50.0% | |
| TTCAGCATATGTGTGTGGGG+AGG | - | chr4.4:48848167-48848186 | MS.gene97647:intron | 50.0% | |
| ! | AGGCTTTGTCCATGTCCACT+TGG | - | chr4.4:48846829-48846848 | MS.gene97647:intron | 50.0% |
| ! | GGCTTTGTCCATGTCCACTT+GGG | - | chr4.4:48846830-48846849 | MS.gene97647:intron | 50.0% |
| !! | AGTTGACGAGCATTGGACCT+AGG | + | chr4.4:48849543-48849562 | None:intergenic | 50.0% |
| !! | CTGGTGTTGTTGTAGGTGGT+GGG | - | chr4.4:48846876-48846895 | MS.gene97647:CDS | 50.0% |
| !! | CTGGTTGGTCTGAAGGTGTA+AGG | - | chr4.4:48849153-48849172 | MS.gene97647:intron | 50.0% |
| ACAACAGCTGGGAGCAACAG+AGG | - | chr4.4:48848302-48848321 | MS.gene97647:intron | 55.0% | |
| ACCCAGAGCTCAATCCCAAG+TGG | + | chr4.4:48846847-48846866 | None:intergenic | 55.0% | |
| ATGTGTGTGGGGAGGGAGAA+GGG | - | chr4.4:48848175-48848194 | MS.gene97647:intron | 55.0% | |
| CCTTCAGACCAACCAGGGAA+AGG | + | chr4.4:48849149-48849168 | None:intergenic | 55.0% | |
| GTCCACTTGGGATTGAGCTC+TGG | - | chr4.4:48846842-48846861 | MS.gene97647:CDS | 55.0% | |
| GTGTGGGAGTTGACGAGCAT+TGG | + | chr4.4:48849550-48849569 | None:intergenic | 55.0% | |
| TATGTGTGTGGGGAGGGAGA+AGG | - | chr4.4:48848174-48848193 | MS.gene97647:intron | 55.0% | |
| TGCCCTTAGTGACCTGACAG+CGG | + | chr4.4:48851290-48851309 | None:intergenic | 55.0% | |
| ! | GGGTTGGGTACATGCCACTT+GGG | + | chr4.4:48851221-48851240 | None:intergenic | 55.0% |
| ! | TGGGTTGGGTACATGCCACT+TGG | + | chr4.4:48851222-48851241 | None:intergenic | 55.0% |
| !! | CCTTTCCCTGGTTGGTCTGA+AGG | - | chr4.4:48849146-48849165 | MS.gene97647:intron | 55.0% |
| !! | GCTGGTGTTGTTGTAGGTGG+TGG | - | chr4.4:48846875-48846894 | MS.gene97647:CDS | 55.0% |
| !! | TTGGGATTGAGCTCTGGGTG+TGG | - | chr4.4:48846848-48846867 | MS.gene97647:CDS | 55.0% |
| !!! | AGCTCTGGGTGTGGTTTTGC+TGG | - | chr4.4:48846857-48846876 | MS.gene97647:CDS | 55.0% |
| GGCAGCAAGACAAGGTGGGG+TGG | - | chr4.4:48851677-48851696 | MS.gene97647:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 48845191 | 48851797 | 48845191 | ID=MS.gene97647 |
| chr4.4 | mRNA | 48845191 | 48851797 | 48845191 | ID=MS.gene97647.t1;Parent=MS.gene97647 |
| chr4.4 | exon | 48851719 | 48851797 | 48851719 | ID=MS.gene97647.t1.exon1;Parent=MS.gene97647.t1 |
| chr4.4 | CDS | 48851719 | 48851797 | 48851719 | ID=cds.MS.gene97647.t1;Parent=MS.gene97647.t1 |
| chr4.4 | exon | 48851502 | 48851605 | 48851502 | ID=MS.gene97647.t1.exon2;Parent=MS.gene97647.t1 |
| chr4.4 | CDS | 48851502 | 48851605 | 48851502 | ID=cds.MS.gene97647.t1;Parent=MS.gene97647.t1 |
| chr4.4 | exon | 48849156 | 48849358 | 48849156 | ID=MS.gene97647.t1.exon3;Parent=MS.gene97647.t1 |
| chr4.4 | CDS | 48849156 | 48849358 | 48849156 | ID=cds.MS.gene97647.t1;Parent=MS.gene97647.t1 |
| chr4.4 | exon | 48848951 | 48849051 | 48848951 | ID=MS.gene97647.t1.exon4;Parent=MS.gene97647.t1 |
| chr4.4 | CDS | 48848951 | 48849051 | 48848951 | ID=cds.MS.gene97647.t1;Parent=MS.gene97647.t1 |
| chr4.4 | exon | 48848624 | 48848816 | 48848624 | ID=MS.gene97647.t1.exon5;Parent=MS.gene97647.t1 |
| chr4.4 | CDS | 48848624 | 48848816 | 48848624 | ID=cds.MS.gene97647.t1;Parent=MS.gene97647.t1 |
| chr4.4 | exon | 48847814 | 48847975 | 48847814 | ID=MS.gene97647.t1.exon6;Parent=MS.gene97647.t1 |
| chr4.4 | CDS | 48847814 | 48847975 | 48847814 | ID=cds.MS.gene97647.t1;Parent=MS.gene97647.t1 |
| chr4.4 | exon | 48846836 | 48846917 | 48846836 | ID=MS.gene97647.t1.exon7;Parent=MS.gene97647.t1 |
| chr4.4 | CDS | 48846836 | 48846917 | 48846836 | ID=cds.MS.gene97647.t1;Parent=MS.gene97647.t1 |
| chr4.4 | exon | 48846470 | 48846739 | 48846470 | ID=MS.gene97647.t1.exon8;Parent=MS.gene97647.t1 |
| chr4.4 | CDS | 48846470 | 48846739 | 48846470 | ID=cds.MS.gene97647.t1;Parent=MS.gene97647.t1 |
| chr4.4 | exon | 48846046 | 48846173 | 48846046 | ID=MS.gene97647.t1.exon9;Parent=MS.gene97647.t1 |
| chr4.4 | CDS | 48846046 | 48846173 | 48846046 | ID=cds.MS.gene97647.t1;Parent=MS.gene97647.t1 |
| chr4.4 | exon | 48845191 | 48845344 | 48845191 | ID=MS.gene97647.t1.exon10;Parent=MS.gene97647.t1 |
| chr4.4 | CDS | 48845191 | 48845344 | 48845191 | ID=cds.MS.gene97647.t1;Parent=MS.gene97647.t1 |
| Gene Sequence |
| Protein sequence |
