Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057611.t1 | XP_003613543.1 | 92.2 | 281 | 21 | 1 | 1 | 281 | 1 | 280 | 8.60E-147 | 529.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057611.t1 | Q9UDY4 | 34.1 | 340 | 146 | 5 | 5 | 275 | 4 | 334 | 1.6e-48 | 194.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057611.t1 | G7K8E9 | 92.2 | 281 | 21 | 1 | 1 | 281 | 1 | 280 | 6.2e-147 | 529.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene057611 | 0.836391 | 9.62E-57 | -1.69E-46 |
| MS.gene051332 | MS.gene057611 | 0.822481 | 2.31E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene057611 | 0.804444 | 2.15E-49 | -1.69E-46 |
| MS.gene052534 | MS.gene057611 | 0.818779 | 1.64E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene057611 | 0.81501 | 1.15E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene057611 | 0.805512 | 1.29E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene057611 | 0.805535 | 1.27E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene057611 | 0.804561 | 2.04E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene057611 | 0.82334 | 1.46E-53 | -1.69E-46 |
| MS.gene057611 | MS.gene06372 | 0.842769 | 2.11E-58 | -1.69E-46 |
| MS.gene057611 | MS.gene065069 | 0.803241 | 3.83E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene066319 | 0.801141 | 1.04E-48 | -1.69E-46 |
| MS.gene057611 | MS.gene066335 | 0.81699 | 4.16E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene06643 | 0.823659 | 1.23E-53 | -1.69E-46 |
| MS.gene057611 | MS.gene066746 | 0.807325 | 5.34E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene067087 | 0.816421 | 5.58E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene067410 | 0.807058 | 6.08E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene06857 | 0.814748 | 1.32E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene070301 | 0.82301 | 1.74E-53 | -1.69E-46 |
| MS.gene057611 | MS.gene070818 | 0.819189 | 1.32E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene072029 | 0.803619 | 3.20E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene072116 | 0.804224 | 2.39E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene072153 | 0.801642 | 8.18E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene07876 | 0.818455 | 1.94E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene09600 | 0.819073 | 1.41E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene20298 | 0.814817 | 1.27E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene21336 | 0.814447 | 1.53E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene21536 | 0.821519 | 3.87E-53 | -1.69E-46 |
| MS.gene057611 | MS.gene21562 | 0.803648 | 3.15E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene24623 | 0.809466 | 1.87E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene25151 | 0.814879 | 1.23E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene25269 | 0.804126 | 2.51E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene25860 | 0.816036 | 6.80E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene25991 | 0.804298 | 2.31E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene27516 | 0.815555 | 8.71E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene29428 | 0.820671 | 6.06E-53 | -1.69E-46 |
| MS.gene057611 | MS.gene29631 | 0.801713 | 7.91E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene30350 | 0.803629 | 3.18E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene31904 | 0.810217 | 1.29E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene32874 | 0.804118 | 2.52E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene33650 | 0.830304 | 3.17E-55 | -1.69E-46 |
| MS.gene057611 | MS.gene33651 | 0.816796 | 4.60E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene33853 | 0.803036 | 4.22E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene34850 | 0.804725 | 1.88E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene35044 | 0.825642 | 4.19E-54 | -1.69E-46 |
| MS.gene057611 | MS.gene35107 | 0.806243 | 9.04E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene35530 | 0.801294 | 9.64E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene35858 | 0.810898 | 9.17E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene36440 | 0.81112 | 8.21E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene36571 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene37570 | 0.800207 | 1.61E-48 | -1.69E-46 |
| MS.gene057611 | MS.gene39404 | 0.813843 | 2.09E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene40068 | 0.816191 | 6.28E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene40079 | 0.828538 | 8.50E-55 | -1.69E-46 |
| MS.gene057611 | MS.gene40157 | 0.81367 | 2.28E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene40709 | 0.813532 | 2.44E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene40882 | 0.80216 | 6.40E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene41729 | 0.800802 | 1.21E-48 | -1.69E-46 |
| MS.gene057611 | MS.gene42142 | 0.803391 | 3.57E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene43878 | 0.803626 | 3.19E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene44356 | 0.801646 | 8.16E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene44510 | 0.800428 | 1.45E-48 | -1.69E-46 |
| MS.gene057611 | MS.gene45524 | 0.811842 | 5.72E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene47822 | 0.809155 | 2.18E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene48389 | 0.805989 | 1.02E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene49320 | 0.809944 | 1.47E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene49613 | 0.875328 | 3.36E-68 | -1.69E-46 |
| MS.gene057611 | MS.gene53467 | 0.810042 | 1.40E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene54197 | 0.811125 | 8.19E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene56441 | 0.807705 | 4.44E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene58520 | 0.812704 | 3.71E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene58547 | 0.821574 | 3.76E-53 | -1.69E-46 |
| MS.gene057611 | MS.gene58802 | 0.812083 | 5.07E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene59540 | 0.80211 | 6.55E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene59697 | 0.804172 | 2.45E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene60150 | 0.805463 | 1.32E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene60566 | 0.800687 | 1.28E-48 | -1.69E-46 |
| MS.gene057611 | MS.gene60827 | 0.813554 | 2.41E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene65141 | 0.811646 | 6.31E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene67662 | 0.813431 | 2.57E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene68198 | 0.804891 | 1.74E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene70656 | 0.816719 | 4.78E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene71945 | 0.820887 | 5.41E-53 | -1.69E-46 |
| MS.gene057611 | MS.gene74537 | 0.808337 | 3.25E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene74604 | 0.815048 | 1.13E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene74956 | 0.820288 | 7.42E-53 | -1.69E-46 |
| MS.gene057611 | MS.gene75413 | 0.802622 | 5.14E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene75521 | 0.825288 | 5.09E-54 | -1.69E-46 |
| MS.gene057611 | MS.gene76244 | 0.829058 | 6.37E-55 | -1.69E-46 |
| MS.gene057611 | MS.gene80631 | 0.811472 | 6.88E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene80712 | 0.816366 | 5.74E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene81047 | 0.825464 | 4.62E-54 | -1.69E-46 |
| MS.gene057611 | MS.gene83538 | 0.800234 | 1.59E-48 | -1.69E-46 |
| MS.gene057611 | MS.gene85936 | 0.809128 | 2.20E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene87673 | 0.829808 | 4.18E-55 | -1.69E-46 |
| MS.gene057611 | MS.gene89985 | 0.807125 | 5.89E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene90585 | 0.801656 | 8.12E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene92320 | 0.815602 | 8.50E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene94674 | 0.817063 | 4.01E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene96324 | 0.802733 | 4.88E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene97030 | 0.802389 | 5.74E-49 | -1.69E-46 |
| MS.gene057611 | MS.gene97647 | 0.811121 | 8.20E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene99849 | 0.811166 | 8.02E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene99858 | 0.809358 | 1.97E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene99894 | 0.836135 | 1.12E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057611.t1 | MTR_5g037880 | 92.171 | 281 | 21 | 1 | 1 | 281 | 1 | 280 | 0.0 | 531 |
| MS.gene057611.t1 | MTR_4g015840 | 54.211 | 190 | 86 | 1 | 88 | 277 | 75 | 263 | 1.96e-69 | 216 |
| MS.gene057611.t1 | MTR_4g015840 | 54.497 | 189 | 85 | 1 | 88 | 276 | 152 | 339 | 1.37e-68 | 216 |
| MS.gene057611.t1 | MTR_4g015840 | 51.190 | 84 | 28 | 2 | 5 | 82 | 4 | 80 | 1.21e-18 | 84.7 |
| MS.gene057611.t1 | MTR_2g090705 | 56.322 | 174 | 76 | 0 | 102 | 275 | 161 | 334 | 7.97e-68 | 214 |
| MS.gene057611.t1 | MTR_2g090705 | 49.462 | 93 | 34 | 2 | 5 | 91 | 4 | 89 | 3.32e-18 | 83.6 |
| MS.gene057611.t1 | MTR_2g014470 | 54.237 | 177 | 81 | 0 | 99 | 275 | 162 | 338 | 1.82e-66 | 211 |
| MS.gene057611.t1 | MTR_2g014470 | 52.083 | 96 | 29 | 3 | 5 | 90 | 4 | 92 | 7.66e-21 | 90.9 |
| MS.gene057611.t1 | MTR_4g078850 | 49.490 | 196 | 95 | 1 | 88 | 279 | 152 | 347 | 6.09e-66 | 209 |
| MS.gene057611.t1 | MTR_4g078850 | 46.316 | 95 | 38 | 2 | 5 | 93 | 4 | 91 | 1.87e-19 | 87.0 |
| MS.gene057611.t1 | MTR_3g108020 | 54.023 | 174 | 80 | 0 | 102 | 275 | 152 | 325 | 7.09e-62 | 198 |
| MS.gene057611.t1 | MTR_3g108020 | 54.667 | 75 | 27 | 1 | 5 | 79 | 4 | 71 | 7.55e-19 | 85.1 |
| MS.gene057611.t1 | MTR_2g014480 | 53.086 | 162 | 73 | 1 | 102 | 260 | 169 | 330 | 1.03e-55 | 183 |
| MS.gene057611.t1 | MTR_2g014480 | 52.381 | 84 | 30 | 2 | 5 | 88 | 4 | 77 | 4.45e-18 | 83.2 |
| MS.gene057611.t1 | MTR_3g088140 | 46.927 | 179 | 94 | 1 | 102 | 279 | 179 | 357 | 1.89e-53 | 177 |
| MS.gene057611.t1 | MTR_3g437840 | 50.355 | 141 | 70 | 0 | 136 | 276 | 22 | 162 | 2.81e-48 | 158 |
| MS.gene057611.t1 | MTR_2g006890 | 42.697 | 178 | 101 | 1 | 101 | 277 | 200 | 377 | 5.71e-43 | 151 |
| MS.gene057611.t1 | MTR_3g437360 | 48.667 | 150 | 74 | 2 | 106 | 253 | 183 | 331 | 6.49e-38 | 136 |
| MS.gene057611.t1 | MTR_7g109340 | 30.395 | 329 | 158 | 9 | 6 | 275 | 27 | 343 | 4.86e-31 | 118 |
| MS.gene057611.t1 | MTR_2g087660 | 37.589 | 141 | 86 | 1 | 137 | 275 | 218 | 358 | 2.25e-28 | 112 |
| MS.gene057611.t1 | MTR_8g006430 | 36.735 | 147 | 89 | 2 | 133 | 275 | 216 | 362 | 7.19e-27 | 108 |
| MS.gene057611.t1 | MTR_4g050420 | 35.461 | 141 | 89 | 1 | 137 | 275 | 216 | 356 | 2.14e-26 | 107 |
| MS.gene057611.t1 | MTR_2g087660 | 36.842 | 95 | 58 | 1 | 137 | 229 | 218 | 312 | 8.45e-18 | 82.0 |
| MS.gene057611.t1 | MTR_7g112360 | 42.683 | 82 | 42 | 2 | 6 | 87 | 17 | 93 | 2.07e-15 | 72.4 |
| MS.gene057611.t1 | MTR_7g112360 | 42.683 | 82 | 42 | 2 | 6 | 87 | 17 | 93 | 2.42e-15 | 71.2 |
| MS.gene057611.t1 | MTR_3g437850 | 33.140 | 172 | 65 | 5 | 5 | 132 | 2 | 167 | 3.56e-14 | 69.3 |
| MS.gene057611.t1 | MTR_4g085070 | 40.566 | 106 | 53 | 4 | 12 | 113 | 19 | 118 | 3.91e-14 | 68.9 |
| MS.gene057611.t1 | MTR_7g101070 | 41.667 | 72 | 35 | 1 | 5 | 76 | 358 | 422 | 5.99e-12 | 65.9 |
| MS.gene057611.t1 | MTR_3g092680 | 52.000 | 50 | 24 | 0 | 228 | 277 | 12 | 61 | 1.20e-11 | 59.3 |
| MS.gene057611.t1 | MTR_5g065160 | 25.806 | 155 | 111 | 3 | 117 | 268 | 263 | 416 | 8.74e-11 | 62.4 |
| MS.gene057611.t1 | MTR_5g065160 | 25.806 | 155 | 111 | 3 | 117 | 268 | 262 | 415 | 9.56e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057611.t1 | AT3G08910 | 44.923 | 325 | 119 | 4 | 5 | 276 | 4 | 321 | 1.47e-90 | 271 |
| MS.gene057611.t1 | AT1G59725 | 43.675 | 332 | 119 | 5 | 5 | 275 | 4 | 328 | 2.07e-78 | 241 |
| MS.gene057611.t1 | AT4G28480 | 44.218 | 294 | 133 | 6 | 5 | 275 | 4 | 289 | 5.15e-78 | 238 |
| MS.gene057611.t1 | AT5G01390 | 44.056 | 286 | 133 | 4 | 5 | 276 | 4 | 276 | 5.85e-77 | 235 |
| MS.gene057611.t1 | AT1G10350 | 54.271 | 199 | 86 | 2 | 77 | 275 | 153 | 346 | 6.84e-73 | 227 |
| MS.gene057611.t1 | AT1G10350 | 57.333 | 75 | 25 | 1 | 5 | 79 | 4 | 71 | 2.00e-20 | 89.7 |
| MS.gene057611.t1 | AT5G01390 | 38.053 | 339 | 135 | 5 | 5 | 276 | 4 | 334 | 2.09e-72 | 226 |
| MS.gene057611.t1 | AT2G20560 | 56.322 | 174 | 76 | 0 | 102 | 275 | 163 | 336 | 3.46e-68 | 215 |
| MS.gene057611.t1 | AT2G20560 | 54.667 | 75 | 27 | 1 | 5 | 79 | 4 | 71 | 6.15e-19 | 85.5 |
| MS.gene057611.t1 | AT3G47940 | 51.000 | 200 | 94 | 2 | 76 | 275 | 151 | 346 | 7.05e-67 | 212 |
| MS.gene057611.t1 | AT3G47940 | 59.211 | 76 | 23 | 2 | 5 | 79 | 4 | 72 | 1.22e-18 | 84.7 |
| MS.gene057611.t1 | AT4G28480 | 52.542 | 177 | 84 | 0 | 99 | 275 | 171 | 347 | 9.61e-65 | 206 |
| MS.gene057611.t1 | AT4G28480 | 47.059 | 102 | 33 | 3 | 5 | 92 | 4 | 98 | 3.12e-19 | 86.7 |
| MS.gene057611.t1 | AT2G20550 | 51.724 | 174 | 84 | 0 | 102 | 275 | 110 | 283 | 1.98e-64 | 204 |
| MS.gene057611.t1 | AT2G20550 | 51.724 | 174 | 84 | 0 | 102 | 275 | 110 | 283 | 1.98e-64 | 204 |
| MS.gene057611.t1 | AT5G25530 | 51.724 | 174 | 84 | 0 | 102 | 275 | 172 | 345 | 1.72e-60 | 196 |
| MS.gene057611.t1 | AT5G25530 | 54.217 | 83 | 23 | 2 | 5 | 79 | 4 | 79 | 4.29e-18 | 83.2 |
| MS.gene057611.t1 | AT5G25530 | 51.724 | 174 | 84 | 0 | 102 | 275 | 164 | 337 | 1.85e-60 | 195 |
| MS.gene057611.t1 | AT5G25530 | 60.000 | 75 | 23 | 1 | 5 | 79 | 4 | 71 | 1.04e-20 | 90.5 |
| MS.gene057611.t1 | AT5G01390 | 35.664 | 286 | 118 | 5 | 5 | 276 | 4 | 237 | 1.43e-50 | 166 |
| MS.gene057611.t1 | AT1G44160 | 44.944 | 178 | 98 | 0 | 102 | 279 | 180 | 357 | 3.26e-48 | 164 |
| MS.gene057611.t1 | AT1G11040 | 42.938 | 177 | 101 | 0 | 101 | 277 | 258 | 434 | 4.86e-45 | 157 |
| MS.gene057611.t1 | AT3G62600 | 30.931 | 333 | 163 | 11 | 1 | 275 | 22 | 345 | 1.42e-32 | 122 |
| MS.gene057611.t1 | AT3G44110 | 35.172 | 145 | 92 | 1 | 137 | 279 | 218 | 362 | 2.11e-26 | 107 |
| MS.gene057611.t1 | AT5G22060 | 34.899 | 149 | 95 | 1 | 133 | 279 | 215 | 363 | 6.46e-26 | 105 |
| MS.gene057611.t1 | AT3G44110 | 36.036 | 111 | 69 | 1 | 137 | 245 | 218 | 328 | 7.23e-20 | 88.2 |
| MS.gene057611.t1 | AT5G01390 | 53.333 | 75 | 28 | 1 | 5 | 79 | 4 | 71 | 2.22e-18 | 82.4 |
| MS.gene057611.t1 | AT1G56300 | 42.857 | 77 | 39 | 2 | 6 | 82 | 14 | 85 | 3.75e-14 | 67.8 |
| MS.gene057611.t1 | AT1G56300 | 42.857 | 77 | 39 | 2 | 6 | 82 | 14 | 85 | 6.79e-14 | 68.2 |
| MS.gene057611.t1 | AT3G17830 | 48.000 | 75 | 30 | 2 | 5 | 79 | 63 | 128 | 1.59e-12 | 67.8 |
| MS.gene057611.t1 | AT2G22360 | 29.457 | 129 | 89 | 2 | 141 | 268 | 295 | 422 | 5.65e-12 | 65.9 |
| MS.gene057611.t1 | AT4G39960 | 27.737 | 137 | 97 | 2 | 141 | 276 | 301 | 436 | 9.92e-12 | 65.1 |
| MS.gene057611.t1 | AT4G39960 | 27.737 | 137 | 97 | 2 | 141 | 276 | 301 | 436 | 9.92e-12 | 65.1 |
| MS.gene057611.t1 | AT4G10130 | 33.663 | 101 | 59 | 2 | 6 | 103 | 12 | 107 | 1.31e-11 | 62.4 |
| MS.gene057611.t1 | AT4G10130 | 33.663 | 101 | 59 | 2 | 6 | 103 | 12 | 107 | 1.31e-11 | 62.4 |
| MS.gene057611.t1 | AT4G10130 | 33.663 | 101 | 59 | 2 | 6 | 103 | 12 | 107 | 1.31e-11 | 62.4 |
| MS.gene057611.t1 | AT4G10130 | 33.663 | 101 | 59 | 2 | 6 | 103 | 12 | 107 | 1.31e-11 | 62.4 |
| MS.gene057611.t1 | AT4G10130 | 33.663 | 101 | 59 | 2 | 6 | 103 | 12 | 107 | 1.31e-11 | 62.4 |
Find 65 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTATTGGTTAATCTTATC+TGG | 0.179052 | 5.4:-27181868 | None:intergenic |
| ATGAATTATTCAAATCTTCT+AGG | 0.190799 | 5.4:-27181819 | None:intergenic |
| TCAATATCCTCCTGTGAATA+TGG | 0.260353 | 5.4:+27182002 | MS.gene057611:CDS |
| TAGCCTTGAGGAGCTTTATA+AGG | 0.272865 | 5.4:+27182092 | MS.gene057611:CDS |
| TCATAGATCTGACGCTTCTT+AGG | 0.281173 | 5.4:-27181970 | None:intergenic |
| TAGACATATCACAGTTAAAT+TGG | 0.291245 | 5.4:+27183809 | MS.gene057611:CDS |
| TTTCCGTCCCTCTTGAATAT+AGG | 0.310061 | 5.4:-27183708 | None:intergenic |
| GACCGAAAAGATATCACTTC+TGG | 0.329613 | 5.4:+27183743 | MS.gene057611:CDS |
| TCAAACTCTTGTTTCCTTGA+AGG | 0.344256 | 5.4:-27181901 | None:intergenic |
| CCTCCTGTGAATATGGAAAA+TGG | 0.346498 | 5.4:+27182009 | MS.gene057611:CDS |
| AAATGGTGATGGGAGTAATA+TGG | 0.355363 | 5.4:+27182026 | MS.gene057611:CDS |
| CTAAGATTTCCTCTCTTGCT+TGG | 0.359101 | 5.4:-27183897 | None:intergenic |
| AAGGGTTCCTTGAAGGGTAT+TGG | 0.378802 | 5.4:-27181882 | None:intergenic |
| GGGAAAGGAAACTATCTTCC+AGG | 0.383769 | 5.4:+27183639 | MS.gene057611:CDS |
| TTCCTTGAAGGGTTCCTTGA+AGG | 0.386957 | 5.4:-27181889 | None:intergenic |
| AGGAATGTTCCTGATGAGTT+TGG | 0.388661 | 5.4:+27182141 | MS.gene057611:CDS |
| CAAACTCTTGTTTCCTTGAA+GGG | 0.397467 | 5.4:-27181900 | None:intergenic |
| TGGAGTTGTTGAGAGTGATT+TGG | 0.415245 | 5.4:+27182065 | MS.gene057611:CDS |
| GGAAACTATCTTCCAGGATC+TGG | 0.417025 | 5.4:+27183645 | MS.gene057611:CDS |
| ATAACAATTTAGTTATGAAA+TGG | 0.419493 | 5.4:+27181842 | MS.gene057611:CDS |
| ACCCTTCAAGGAACCCTTCA+AGG | 0.422943 | 5.4:+27181887 | MS.gene057611:CDS |
| GGAATGTTCCTGATGAGTTT+GGG | 0.422963 | 5.4:+27182142 | MS.gene057611:CDS |
| TCACTTCTGGAAGCTCTTGT+TGG | 0.439755 | 5.4:+27183756 | MS.gene057611:CDS |
| TGAATTATTCAAATCTTCTA+GGG | 0.449404 | 5.4:-27181818 | None:intergenic |
| ACATCAGATGGTCCAGATCC+TGG | 0.451615 | 5.4:-27183657 | None:intergenic |
| AGCCTTGAGGAGCTTTATAA+GGG | 0.452797 | 5.4:+27182093 | MS.gene057611:CDS |
| TCCTTGAAGGGTTCCTTGAA+GGG | 0.457964 | 5.4:-27181888 | None:intergenic |
| GGAAGATAGTTTCCTTTCCC+AGG | 0.472749 | 5.4:-27183636 | None:intergenic |
| GTGGATTACCCAAACTCATC+AGG | 0.474906 | 5.4:-27182150 | None:intergenic |
| AAAGGAAGGTGAAAGTTGTA+AGG | 0.495090 | 5.4:+27182121 | MS.gene057611:CDS |
| TTGCTTGGATCCTTTGAAAG+TGG | 0.501531 | 5.4:-27183882 | None:intergenic |
| AGATTAACCAATACCCTTCA+AGG | 0.505955 | 5.4:+27181875 | MS.gene057611:CDS |
| CTCAACATCACAACCTTGGA+TGG | 0.509868 | 5.4:+27183786 | MS.gene057611:CDS |
| GAAAAGGTCGTCGCTGATGA+AGG | 0.511756 | 5.4:+27183855 | MS.gene057611:CDS |
| TATTCAACCTGGTTGGAAGA+AGG | 0.512246 | 5.4:+27183596 | MS.gene057611:CDS |
| GGTATTGGTTAATCTTATCT+GGG | 0.512734 | 5.4:-27181867 | None:intergenic |
| TTATAGGTTTAGTAATCAGC+AGG | 0.520440 | 5.4:-27183996 | None:intergenic |
| TTCAAGGAAACAAGAGTTTG+AGG | 0.523578 | 5.4:+27181903 | MS.gene057611:CDS |
| TGAAGGTATGCCACTTTCAA+AGG | 0.534883 | 5.4:+27183872 | MS.gene057611:CDS |
| GTGAATATGGAAAATGGTGA+TGG | 0.539312 | 5.4:+27182015 | MS.gene057611:CDS |
| GACTCTCAACATCACAACCT+TGG | 0.539538 | 5.4:+27183782 | MS.gene057611:CDS |
| TGTGACACCGGGATATGAAA+AGG | 0.540202 | 5.4:+27183839 | MS.gene057611:CDS |
| ACTAAGAACTTCATAAGCCT+CGG | 0.548724 | 5.4:-27181944 | None:intergenic |
| ATTCAACCTGGTTGGAAGAA+GGG | 0.550194 | 5.4:+27183597 | MS.gene057611:CDS |
| TTTGTACCCTTCTTCCAACC+AGG | 0.551829 | 5.4:-27183603 | None:intergenic |
| TGTTGTGAGGTCAAACTTGG+TGG | 0.554178 | 5.4:-27183942 | None:intergenic |
| TTATAAGGGTTGCAAAAGGA+AGG | 0.556592 | 5.4:+27182107 | MS.gene057611:CDS |
| CGATTACTACAAAACACTAA+AGG | 0.559196 | 5.4:+27181780 | MS.gene057611:CDS |
| TCCCTCTTGAATATAGGATG+TGG | 0.559598 | 5.4:-27183702 | None:intergenic |
| AGCTTTATAAGGGTTGCAAA+AGG | 0.560966 | 5.4:+27182103 | MS.gene057611:CDS |
| AGATACATATTCAACCTGGT+TGG | 0.563118 | 5.4:+27183589 | MS.gene057611:CDS |
| ATTGGATGATATTGTGACAC+CGG | 0.564217 | 5.4:+27183827 | MS.gene057611:CDS |
| TGTGATATGTCTACCATCCA+AGG | 0.580757 | 5.4:-27183799 | None:intergenic |
| ATGGAGGTTGATGAAAGTGT+TGG | 0.594938 | 5.4:+27182045 | MS.gene057611:CDS |
| GACCACATCCTATATTCAAG+AGG | 0.624354 | 5.4:+27183700 | MS.gene057611:CDS |
| TCAAAGGATCCAAGCAAGAG+AGG | 0.627088 | 5.4:+27183888 | MS.gene057611:CDS |
| TTGGATGATATTGTGACACC+GGG | 0.630525 | 5.4:+27183828 | MS.gene057611:CDS |
| CGTCAGATCTATGATCGCAA+TGG | 0.644762 | 5.4:+27181979 | MS.gene057611:CDS |
| AACCCTTATAAAGCTCCTCA+AGG | 0.648125 | 5.4:-27182095 | None:intergenic |
| TTGAAGATACATATTCAACC+TGG | 0.655040 | 5.4:+27183585 | MS.gene057611:CDS |
| TGATTTGGTATGTAGCCTTG+AGG | 0.655134 | 5.4:+27182080 | MS.gene057611:CDS |
| CATCCTATATTCAAGAGGGA+CGG | 0.657831 | 5.4:+27183705 | MS.gene057611:CDS |
| TGGTGATGGGAGTAATATGG+AGG | 0.659763 | 5.4:+27182029 | MS.gene057611:CDS |
| TGAATATGGAAAATGGTGAT+GGG | 0.659962 | 5.4:+27182016 | MS.gene057611:CDS |
| ACCACATCCTATATTCAAGA+GGG | 0.666261 | 5.4:+27183701 | MS.gene057611:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAACAAATTAATTAGAT+TGG | - | chr5.4:27182251-27182270 | None:intergenic | 10.0% |
| !!! | AATCTAATTAATTTGTTATT+AGG | + | chr5.4:27182250-27182269 | MS.gene057611:intron | 10.0% |
| !!! | ATCTAATTAATTTGTTATTA+GGG | + | chr5.4:27182251-27182270 | MS.gene057611:intron | 10.0% |
| !! | AAATCAAATACTAAAAATCA+TGG | - | chr5.4:27182421-27182440 | None:intergenic | 15.0% |
| !! | AACACAAAAAACAAAAATTA+AGG | - | chr5.4:27182181-27182200 | None:intergenic | 15.0% |
| !! | ATAACAATTTAGTTATGAAA+TGG | + | chr5.4:27181842-27181861 | MS.gene057611:CDS | 15.0% |
| !!! | AAAATCATGGTTTTAAATAA+AGG | - | chr5.4:27182408-27182427 | None:intergenic | 15.0% |
| !!! | ATTTCAATTGTAAACTTTTT+TGG | + | chr5.4:27183100-27183119 | MS.gene057611:intron | 15.0% |
| !!! | TATCTGTATTATGTATATTT+TGG | + | chr5.4:27183143-27183162 | MS.gene057611:intron | 15.0% |
| !!! | TATTTGATTTGATGATTTTT+AGG | + | chr5.4:27182431-27182450 | MS.gene057611:intron | 15.0% |
| !!! | TTTTTATTAGTTTTGAAAAC+AGG | + | chr5.4:27182567-27182586 | MS.gene057611:intron | 15.0% |
| !! | AACAAAAATATGATGTAAGA+AGG | + | chr5.4:27183961-27183980 | MS.gene057611:CDS | 20.0% |
| !! | ATGAATTATTCAAATCTTCT+AGG | - | chr5.4:27181822-27181841 | None:intergenic | 20.0% |
| !! | TGAATTATTCAAATCTTCTA+GGG | - | chr5.4:27181821-27181840 | None:intergenic | 20.0% |
| !! | TTGATACTTAACACTTAATT+AGG | + | chr5.4:27182796-27182815 | MS.gene057611:intron | 20.0% |
| !!! | CTTATTCTACATATGAATTT+TGG | + | chr5.4:27182939-27182958 | MS.gene057611:intron | 20.0% |
| ! | AACAAAAATTAAGGAGAAAG+TGG | - | chr5.4:27182172-27182191 | None:intergenic | 25.0% |
| ! | TAGACATATCACAGTTAAAT+TGG | + | chr5.4:27183809-27183828 | MS.gene057611:CDS | 25.0% |
| !! | AAACTGTAAGTTGTTTCAAT+AGG | - | chr5.4:27182704-27182723 | None:intergenic | 25.0% |
| !! | AGGAGTTTTCTTTTCTAAAT+TGG | + | chr5.4:27183529-27183548 | MS.gene057611:intron | 25.0% |
| !! | TTCTACATATGAATTTTGGA+TGG | + | chr5.4:27182943-27182962 | MS.gene057611:intron | 25.0% |
| !!! | AAATTTTAAGAGAATTTCCG+AGG | + | chr5.4:27181927-27181946 | MS.gene057611:CDS | 25.0% |
| !!! | ATACATAAGTTGGTTTAACA+AGG | + | chr5.4:27183509-27183528 | MS.gene057611:intron | 25.0% |
| !!! | CTTTTCTAAATTGGTTTTAC+AGG | + | chr5.4:27183538-27183557 | MS.gene057611:intron | 25.0% |
| !!! | GTTATTAGGGTTTTATTTAG+TGG | + | chr5.4:27182264-27182283 | MS.gene057611:intron | 25.0% |
| !!! | TACATCATATTTTTGTTGTG+AGG | - | chr5.4:27183958-27183977 | None:intergenic | 25.0% |
| !!! | TATTAGTTTTGAAAACAGGT+GGG | + | chr5.4:27182571-27182590 | MS.gene057611:intron | 25.0% |
| !!! | TGCTGTTATTATGCTATTTT+TGG | + | chr5.4:27183046-27183065 | MS.gene057611:intron | 25.0% |
| !!! | TGTGTTTTTGCTTTGAAATT+CGG | + | chr5.4:27182195-27182214 | MS.gene057611:intron | 25.0% |
| !!! | TTATTAGTTTTGAAAACAGG+TGG | + | chr5.4:27182570-27182589 | MS.gene057611:intron | 25.0% |
| AAACACTTGTGCAAATGTTT+GGG | + | chr5.4:27182629-27182648 | MS.gene057611:intron | 30.0% | |
| ACAGTGATATGTAACACAAA+TGG | - | chr5.4:27182866-27182885 | None:intergenic | 30.0% | |
| ACATCTCGAATACTAAAGAA+AGG | - | chr5.4:27183239-27183258 | None:intergenic | 30.0% | |
| ACCACAAAAATTACATCAGA+TGG | - | chr5.4:27183672-27183691 | None:intergenic | 30.0% | |
| CAATCTTGATCACAACATAA+CGG | - | chr5.4:27182375-27182394 | None:intergenic | 30.0% | |
| CATTGCATGTTTGTTTATGT+TGG | + | chr5.4:27182497-27182516 | MS.gene057611:intron | 30.0% | |
| CGATTACTACAAAACACTAA+AGG | + | chr5.4:27181780-27181799 | MS.gene057611:CDS | 30.0% | |
| GACTTAGTGTAACAGTAAAT+AGG | - | chr5.4:27183409-27183428 | None:intergenic | 30.0% | |
| GCAGAATTCAAAATTAGAGT+CGG | - | chr5.4:27182902-27182921 | None:intergenic | 30.0% | |
| GGTTGCATGTATATGAAAAT+TGG | + | chr5.4:27182452-27182471 | MS.gene057611:intron | 30.0% | |
| TAAACACTTGTGCAAATGTT+TGG | + | chr5.4:27182628-27182647 | MS.gene057611:intron | 30.0% | |
| TAACATATGATTGAGTGGTT+TGG | + | chr5.4:27183367-27183386 | MS.gene057611:intron | 30.0% | |
| TGAATATGGAAAATGGTGAT+GGG | + | chr5.4:27182016-27182035 | MS.gene057611:CDS | 30.0% | |
| TTGAAGATACATATTCAACC+TGG | + | chr5.4:27183585-27183604 | MS.gene057611:CDS | 30.0% | |
| TTTATTTAGTGGTTGTGTTG+CGG | + | chr5.4:27182275-27182294 | MS.gene057611:intron | 30.0% | |
| ! | AATTAATTAGATTGGTCCCT+CGG | - | chr5.4:27182243-27182262 | None:intergenic | 30.0% |
| ! | ACCATCTGATGTAATTTTTG+TGG | + | chr5.4:27183668-27183687 | MS.gene057611:CDS | 30.0% |
| ! | GTTTGTTTATGTTGGCTATT+AGG | + | chr5.4:27182505-27182524 | MS.gene057611:intron | 30.0% |
| ! | TGAATTTTGGATGGTTTACT+TGG | + | chr5.4:27182952-27182971 | MS.gene057611:intron | 30.0% |
| ! | TTCCAGAAGTGATATCTTTT+CGG | - | chr5.4:27183748-27183767 | None:intergenic | 30.0% |
| !! | GGTATTGGTTAATCTTATCT+GGG | - | chr5.4:27181870-27181889 | None:intergenic | 30.0% |
| AAAGGAAGGTGAAAGTTGTA+AGG | + | chr5.4:27182121-27182140 | MS.gene057611:CDS | 35.0% | |
| AAATGGTGCGCATTAGTATT+AGG | - | chr5.4:27182849-27182868 | None:intergenic | 35.0% | |
| ACCACATCCTATATTCAAGA+GGG | + | chr5.4:27183701-27183720 | MS.gene057611:CDS | 35.0% | |
| ACTAAGAACTTCATAAGCCT+CGG | - | chr5.4:27181947-27181966 | None:intergenic | 35.0% | |
| AGATACATATTCAACCTGGT+TGG | + | chr5.4:27183589-27183608 | MS.gene057611:CDS | 35.0% | |
| AGATTAACCAATACCCTTCA+AGG | + | chr5.4:27181875-27181894 | MS.gene057611:CDS | 35.0% | |
| ATTGGATGATATTGTGACAC+CGG | + | chr5.4:27183827-27183846 | MS.gene057611:CDS | 35.0% | |
| CGCATTAGTATTAGGAGTTA+GGG | - | chr5.4:27182841-27182860 | None:intergenic | 35.0% | |
| CTGTGTAACATATGATTGAG+TGG | + | chr5.4:27183362-27183381 | MS.gene057611:intron | 35.0% | |
| CTTTGCTTGGATACATAAGT+TGG | + | chr5.4:27183499-27183518 | MS.gene057611:intron | 35.0% | |
| GCATTAGTATTAGGAGTTAG+GGG | - | chr5.4:27182840-27182859 | None:intergenic | 35.0% | |
| GGGTTTGGAAAAGCTTATAT+AGG | + | chr5.4:27182591-27182610 | MS.gene057611:intron | 35.0% | |
| GTGAATATGGAAAATGGTGA+TGG | + | chr5.4:27182015-27182034 | MS.gene057611:CDS | 35.0% | |
| TCAATATCCTCCTGTGAATA+TGG | + | chr5.4:27182002-27182021 | MS.gene057611:CDS | 35.0% | |
| TCGAATACTAAAGAAAGGAG+TGG | - | chr5.4:27183234-27183253 | None:intergenic | 35.0% | |
| TGTTGGTGTAAGAAACTGAT+AGG | + | chr5.4:27183310-27183329 | MS.gene057611:intron | 35.0% | |
| TTATAAGGGTTGCAAAAGGA+AGG | + | chr5.4:27182107-27182126 | MS.gene057611:CDS | 35.0% | |
| TTCAAGGAAACAAGAGTTTG+AGG | + | chr5.4:27181903-27181922 | MS.gene057611:CDS | 35.0% | |
| TTGAATGTAACCACATGTGT+TGG | + | chr5.4:27183293-27183312 | MS.gene057611:intron | 35.0% | |
| ! | AACCACAATTGAAGCCTTAT+CGG | - | chr5.4:27182336-27182355 | None:intergenic | 35.0% |
| ! | AGCTTTATAAGGGTTGCAAA+AGG | + | chr5.4:27182103-27182122 | MS.gene057611:CDS | 35.0% |
| ! | CAAACTCTTGTTTCCTTGAA+GGG | - | chr5.4:27181903-27181922 | None:intergenic | 35.0% |
| ! | TAAGGCTTCAATTGTGGTTT+TGG | + | chr5.4:27182337-27182356 | MS.gene057611:intron | 35.0% |
| ! | TCAAACTCTTGTTTCCTTGA+AGG | - | chr5.4:27181904-27181923 | None:intergenic | 35.0% |
| ! | TCACCATTTTCCATATTCAC+AGG | - | chr5.4:27182015-27182034 | None:intergenic | 35.0% |
| !! | AAATGGTGATGGGAGTAATA+TGG | + | chr5.4:27182026-27182045 | MS.gene057611:CDS | 35.0% |
| !! | GCTGCTATATTCTGCTATTT+TGG | + | chr5.4:27183068-27183087 | MS.gene057611:intron | 35.0% |
| !! | GGGTATTGGTTAATCTTATC+TGG | - | chr5.4:27181871-27181890 | None:intergenic | 35.0% |
| !! | TTTTGTTGTGAGGTCAAACT+TGG | - | chr5.4:27183948-27183967 | None:intergenic | 35.0% |
| !!! | GTACAAAAGTCACTTTTCCT+GGG | + | chr5.4:27183619-27183638 | MS.gene057611:CDS | 35.0% |
| AACCCTTATAAAGCTCCTCA+AGG | - | chr5.4:27182098-27182117 | None:intergenic | 40.0% | |
| AGGAATGTTCCTGATGAGTT+TGG | + | chr5.4:27182141-27182160 | MS.gene057611:CDS | 40.0% | |
| ATACTAAAGAAAGGAGTGGC+TGG | - | chr5.4:27183230-27183249 | None:intergenic | 40.0% | |
| ATGTGACAAAATGACAGCAC+AGG | - | chr5.4:27183002-27183021 | None:intergenic | 40.0% | |
| ATTCAACCTGGTTGGAAGAA+GGG | + | chr5.4:27183597-27183616 | MS.gene057611:CDS | 40.0% | |
| CATCCTATATTCAAGAGGGA+CGG | + | chr5.4:27183705-27183724 | MS.gene057611:CDS | 40.0% | |
| CCTCCTGTGAATATGGAAAA+TGG | + | chr5.4:27182009-27182028 | MS.gene057611:CDS | 40.0% | |
| CTAAGATTTCCTCTCTTGCT+TGG | - | chr5.4:27183900-27183919 | None:intergenic | 40.0% | |
| GACCACATCCTATATTCAAG+AGG | + | chr5.4:27183700-27183719 | MS.gene057611:CDS | 40.0% | |
| GACCGAAAAGATATCACTTC+TGG | + | chr5.4:27183743-27183762 | MS.gene057611:CDS | 40.0% | |
| GCGCATTAGTATTAGGAGTT+AGG | - | chr5.4:27182842-27182861 | None:intergenic | 40.0% | |
| GGAATGTTCCTGATGAGTTT+GGG | + | chr5.4:27182142-27182161 | MS.gene057611:CDS | 40.0% | |
| GTTTCTTACACCAACACATG+TGG | - | chr5.4:27183306-27183325 | None:intergenic | 40.0% | |
| TATTCAACCTGGTTGGAAGA+AGG | + | chr5.4:27183596-27183615 | MS.gene057611:CDS | 40.0% | |
| TCATAGATCTGACGCTTCTT+AGG | - | chr5.4:27181973-27181992 | None:intergenic | 40.0% | |
| TCCCTCTTGAATATAGGATG+TGG | - | chr5.4:27183705-27183724 | None:intergenic | 40.0% | |
| TGGAGTTGTTGAGAGTGATT+TGG | + | chr5.4:27182065-27182084 | MS.gene057611:CDS | 40.0% | |
| TGTATCCAAGCAAAGTGAGA+AGG | - | chr5.4:27183494-27183513 | None:intergenic | 40.0% | |
| TGTGATATGTCTACCATCCA+AGG | - | chr5.4:27183802-27183821 | None:intergenic | 40.0% | |
| TGTGATATTGCTGAGAATCG+CGG | + | chr5.4:27182300-27182319 | MS.gene057611:intron | 40.0% | |
| TTGGATGATATTGTGACACC+GGG | + | chr5.4:27183828-27183847 | MS.gene057611:CDS | 40.0% | |
| TTTCCGTCCCTCTTGAATAT+AGG | - | chr5.4:27183711-27183730 | None:intergenic | 40.0% | |
| ! | AGCCTTGAGGAGCTTTATAA+GGG | + | chr5.4:27182093-27182112 | MS.gene057611:CDS | 40.0% |
| ! | CCATTTTCCATATTCACAGG+AGG | - | chr5.4:27182012-27182031 | None:intergenic | 40.0% |
| ! | TAGCCTTGAGGAGCTTTATA+AGG | + | chr5.4:27182092-27182111 | MS.gene057611:CDS | 40.0% |
| ! | TTGCTTGGATCCTTTGAAAG+TGG | - | chr5.4:27183885-27183904 | None:intergenic | 40.0% |
| !! | ATGGAGGTTGATGAAAGTGT+TGG | + | chr5.4:27182045-27182064 | MS.gene057611:CDS | 40.0% |
| !! | TGAAGGTATGCCACTTTCAA+AGG | + | chr5.4:27183872-27183891 | MS.gene057611:CDS | 40.0% |
| !! | TGATTTGGTATGTAGCCTTG+AGG | + | chr5.4:27182080-27182099 | MS.gene057611:CDS | 40.0% |
| !!! | AAAGTCACTTTTCCTGGGAA+AGG | + | chr5.4:27183624-27183643 | MS.gene057611:CDS | 40.0% |
| !!! | GGTACAAAAGTCACTTTTCC+TGG | + | chr5.4:27183618-27183637 | MS.gene057611:CDS | 40.0% |
| !!! | GTTTTGAAAACAGGTGGGTT+TGG | + | chr5.4:27182576-27182595 | MS.gene057611:intron | 40.0% |
| AAGCAAAGTGAGAAGGAAGG+GGG | - | chr5.4:27183487-27183506 | None:intergenic | 45.0% | |
| AGCCGATAAGGCTTCAATTG+TGG | + | chr5.4:27182331-27182350 | MS.gene057611:intron | 45.0% | |
| CAAGCAAAGTGAGAAGGAAG+GGG | - | chr5.4:27183488-27183507 | None:intergenic | 45.0% | |
| CCAAGCAAAGTGAGAAGGAA+GGG | - | chr5.4:27183489-27183508 | None:intergenic | 45.0% | |
| CGTCAGATCTATGATCGCAA+TGG | + | chr5.4:27181979-27181998 | MS.gene057611:CDS | 45.0% | |
| CTAAGAACCGACTAATCCGA+GGG | + | chr5.4:27182224-27182243 | MS.gene057611:intron | 45.0% | |
| CTCAACATCACAACCTTGGA+TGG | + | chr5.4:27183786-27183805 | MS.gene057611:CDS | 45.0% | |
| GACTCTCAACATCACAACCT+TGG | + | chr5.4:27183782-27183801 | MS.gene057611:CDS | 45.0% | |
| GCGATTCTCAGCAATATCAC+AGG | - | chr5.4:27182301-27182320 | None:intergenic | 45.0% | |
| GCGGTAAAATGAAGCCGATA+AGG | + | chr5.4:27182319-27182338 | MS.gene057611:intron | 45.0% | |
| GGAAACTATCTTCCAGGATC+TGG | + | chr5.4:27183645-27183664 | MS.gene057611:CDS | 45.0% | |
| GGAAGATAGTTTCCTTTCCC+AGG | - | chr5.4:27183639-27183658 | None:intergenic | 45.0% | |
| GGGAAAGGAAACTATCTTCC+AGG | + | chr5.4:27183639-27183658 | MS.gene057611:CDS | 45.0% | |
| TCAAAGGATCCAAGCAAGAG+AGG | + | chr5.4:27183888-27183907 | MS.gene057611:CDS | 45.0% | |
| TCCAAGCAAAGTGAGAAGGA+AGG | - | chr5.4:27183490-27183509 | None:intergenic | 45.0% | |
| TCCTTGAAGGGTTCCTTGAA+GGG | - | chr5.4:27181891-27181910 | None:intergenic | 45.0% | |
| TCTAAGAACCGACTAATCCG+AGG | + | chr5.4:27182223-27182242 | MS.gene057611:intron | 45.0% | |
| TGTGACACCGGGATATGAAA+AGG | + | chr5.4:27183839-27183858 | MS.gene057611:CDS | 45.0% | |
| TGTTGTGAGGTCAAACTTGG+TGG | - | chr5.4:27183945-27183964 | None:intergenic | 45.0% | |
| TTCCTTGAAGGGTTCCTTGA+AGG | - | chr5.4:27181892-27181911 | None:intergenic | 45.0% | |
| TTTGTACCCTTCTTCCAACC+AGG | - | chr5.4:27183606-27183625 | None:intergenic | 45.0% | |
| ! | AAGGGTTCCTTGAAGGGTAT+TGG | - | chr5.4:27181885-27181904 | None:intergenic | 45.0% |
| ! | AGGCGTTTAGTCTGAAGTGT+CGG | + | chr5.4:27183330-27183349 | MS.gene057611:intron | 45.0% |
| ! | GTGGATTACCCAAACTCATC+AGG | - | chr5.4:27182153-27182172 | None:intergenic | 45.0% |
| ! | TCACTTCTGGAAGCTCTTGT+TGG | + | chr5.4:27183756-27183775 | MS.gene057611:CDS | 45.0% |
| !! | TGGTGATGGGAGTAATATGG+AGG | + | chr5.4:27182029-27182048 | MS.gene057611:CDS | 45.0% |
| AAAGAAAGGAGTGGCTGGAC+AGG | - | chr5.4:27183225-27183244 | None:intergenic | 50.0% | |
| ACAGGCAACCAAAGGATGAG+GGG | - | chr5.4:27183207-27183226 | None:intergenic | 50.0% | |
| ACATCAGATGGTCCAGATCC+TGG | - | chr5.4:27183660-27183679 | None:intergenic | 50.0% | |
| ACCCTTCAAGGAACCCTTCA+AGG | + | chr5.4:27181887-27181906 | MS.gene057611:CDS | 50.0% | |
| CCCTTCCTTCTCACTTTGCT+TGG | + | chr5.4:27183486-27183505 | MS.gene057611:intron | 50.0% | |
| GAAAAGGTCGTCGCTGATGA+AGG | + | chr5.4:27183855-27183874 | MS.gene057611:CDS | 50.0% | |
| GACAGGCAACCAAAGGATGA+GGG | - | chr5.4:27183208-27183227 | None:intergenic | 50.0% | |
| TGACAGCACAGGCAACATCA+TGG | - | chr5.4:27182991-27183010 | None:intergenic | 50.0% | |
| ! | GCGACGACCTTTTCATATCC+CGG | - | chr5.4:27183849-27183868 | None:intergenic | 50.0% |
| !! | GATTGGTCCCTCGGATTAGT+CGG | - | chr5.4:27182234-27182253 | None:intergenic | 50.0% |
| AGGGGCAGGCAGGTATAAGA+AGG | - | chr5.4:27183189-27183208 | None:intergenic | 55.0% | |
| GGACAGGCAACCAAAGGATG+AGG | - | chr5.4:27183209-27183228 | None:intergenic | 55.0% | |
| GCAACCAAAGGATGAGGGGC+AGG | - | chr5.4:27183203-27183222 | None:intergenic | 60.0% | |
| GTGGCTGGACAGGCAACCAA+AGG | - | chr5.4:27183215-27183234 | None:intergenic | 60.0% | |
| CCAAAGGATGAGGGGCAGGC+AGG | - | chr5.4:27183199-27183218 | None:intergenic | 65.0% | |
| CCTGCCTGCCCCTCATCCTT+TGG | + | chr5.4:27183196-27183215 | MS.gene057611:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 27181769 | 27184010 | 27181769 | ID=MS.gene057611 |
| chr5.4 | mRNA | 27181769 | 27184010 | 27181769 | ID=MS.gene057611.t1;Parent=MS.gene057611 |
| chr5.4 | exon | 27181769 | 27182163 | 27181769 | ID=MS.gene057611.t1.exon1;Parent=MS.gene057611.t1 |
| chr5.4 | CDS | 27181769 | 27182163 | 27181769 | ID=cds.MS.gene057611.t1;Parent=MS.gene057611.t1 |
| chr5.4 | exon | 27183560 | 27184010 | 27183560 | ID=MS.gene057611.t1.exon2;Parent=MS.gene057611.t1 |
| chr5.4 | CDS | 27183560 | 27184010 | 27183560 | ID=cds.MS.gene057611.t1;Parent=MS.gene057611.t1 |
| Gene Sequence |
| Protein sequence |
