Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98523.t1 | XP_003616812.1 | 85.6 | 174 | 11 | 1 | 1 | 174 | 1 | 160 | 1.60E-21 | 112.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98523.t1 | Q09134 | 99.4 | 160 | 0 | 1 | 15 | 174 | 1 | 159 | 1.1e-18 | 94.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98523.t1 | G7K7E0 | 85.6 | 174 | 11 | 1 | 1 | 174 | 1 | 160 | 1.1e-21 | 112.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050076 | MS.gene98523 | 0.836035 | 1.18E-56 | -1.69E-46 |
| MS.gene050404 | MS.gene98523 | 0.886406 | 3.52E-72 | -1.69E-46 |
| MS.gene050406 | MS.gene98523 | 0.867733 | 1.10E-65 | -1.69E-46 |
| MS.gene05101 | MS.gene98523 | 0.812847 | 3.45E-51 | -1.69E-46 |
| MS.gene051242 | MS.gene98523 | 0.80643 | 8.26E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene98523 | 0.828386 | 9.25E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene98523 | 0.806693 | 7.27E-50 | -1.69E-46 |
| MS.gene052178 | MS.gene98523 | 0.817213 | 3.70E-52 | -1.69E-46 |
| MS.gene052290 | MS.gene98523 | 0.836978 | 6.82E-57 | -1.69E-46 |
| MS.gene052340 | MS.gene98523 | 0.816965 | 4.21E-52 | -1.69E-46 |
| MS.gene053073 | MS.gene98523 | 0.818237 | 2.18E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene98523 | 0.830818 | 2.37E-55 | -1.69E-46 |
| MS.gene053907 | MS.gene98523 | 0.835594 | 1.53E-56 | -1.69E-46 |
| MS.gene053971 | MS.gene98523 | 0.834895 | 2.30E-56 | -1.69E-46 |
| MS.gene055254 | MS.gene98523 | 0.845144 | 4.88E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene98523 | 0.800206 | 1.61E-48 | -1.69E-46 |
| MS.gene055533 | MS.gene98523 | 0.81234 | 4.45E-51 | -1.69E-46 |
| MS.gene055896 | MS.gene98523 | 0.806863 | 6.69E-50 | -1.69E-46 |
| MS.gene056451 | MS.gene98523 | 0.811364 | 7.26E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene98523 | 0.804806 | 1.81E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene98523 | 0.853027 | 3.13E-61 | -1.69E-46 |
| MS.gene056664 | MS.gene98523 | 0.836857 | 7.32E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene98523 | 0.842277 | 2.85E-58 | -1.69E-46 |
| MS.gene058233 | MS.gene98523 | 0.809489 | 1.85E-50 | -1.69E-46 |
| MS.gene058276 | MS.gene98523 | 0.810428 | 1.16E-50 | -1.69E-46 |
| MS.gene058746 | MS.gene98523 | 0.81094 | 8.98E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene98523 | 0.882743 | 8.06E-71 | -1.69E-46 |
| MS.gene060407 | MS.gene98523 | 0.826247 | 3.01E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene98523 | 0.852827 | 3.57E-61 | -1.69E-46 |
| MS.gene061112 | MS.gene98523 | 0.869978 | 2.06E-66 | -1.69E-46 |
| MS.gene061265 | MS.gene98523 | 0.861528 | 9.63E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98523.t1 | MTR_5g084570 | 96.000 | 50 | 2 | 0 | 1 | 50 | 1 | 50 | 1.17e-28 | 104 |
| MS.gene98523.t1 | MTR_5g084540 | 100.000 | 26 | 0 | 0 | 149 | 174 | 135 | 160 | 1.07e-14 | 68.2 |
| MS.gene98523.t1 | MTR_5g084460 | 69.643 | 56 | 16 | 1 | 1 | 56 | 1 | 55 | 2.73e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 83 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTACCTCTGATGCCAAAA+AGG | 0.253882 | 5.2:-72194829 | MS.gene98523:CDS |
| GTTGTAACCTCCACCATATT+TGG | 0.288132 | 5.2:+72194653 | None:intergenic |
| GAAGTAAACGATGCCAAATA+TGG | 0.342429 | 5.2:-72194666 | MS.gene98523:CDS |
| ACCTGCCATGGCAATGGTAT+TGG | 0.432416 | 5.2:+72194352 | None:intergenic |
| GAACCATAGCCAAGAGGCCT+AGG | 0.443599 | 5.2:+72194892 | None:intergenic |
| CATCCTAGGCCTCTTGGCTA+TGG | 0.447886 | 5.2:-72194895 | MS.gene98523:CDS |
| AATCCTCATCCTAGGCCTCT+TGG | 0.458683 | 5.2:-72194901 | MS.gene98523:CDS |
| GCCAATACCATTGCCATGGC+AGG | 0.481585 | 5.2:-72194353 | MS.gene98523:CDS |
| GGCTACAACCACGGTGGAGG+CGG | 0.498062 | 5.2:-72194399 | MS.gene98523:CDS |
| AGTGTTGTCCTTAGCTTGCA+TGG | 0.498460 | 5.2:+72194305 | None:intergenic |
| AATGGTGGTGGCTACAACCA+CGG | 0.509286 | 5.2:-72194408 | MS.gene98523:CDS |
| GGTGGCTACAACCACGGTGG+AGG | 0.512711 | 5.2:-72194402 | MS.gene98523:CDS |
| AGAAAAGCAATCCTCATCCT+AGG | 0.516305 | 5.2:-72194909 | MS.gene98523:CDS |
| GGATACAACAATGGTGGAGG+TGG | 0.518813 | 5.2:-72194498 | MS.gene98523:CDS |
| GGATACAACAATGGTGGAGG+TGG | 0.518813 | 5.2:-72194540 | MS.gene98523:CDS |
| GGATACAACAATGGTGGAGG+TGG | 0.518813 | 5.2:-72194582 | MS.gene98523:CDS |
| GGAGGTTACAACCACGGCGG+TGG | 0.523190 | 5.2:-72194642 | MS.gene98523:CDS |
| GGATACAACCACGGTGGTGG+TGG | 0.524452 | 5.2:-72194477 | MS.gene98523:CDS |
| GGATACAACCACGGTGGTGG+TGG | 0.524452 | 5.2:-72194519 | MS.gene98523:CDS |
| GGATACAACCACGGTGGTGG+TGG | 0.524452 | 5.2:-72194561 | MS.gene98523:CDS |
| GGTTACAACCACGGTGGTGG+TGG | 0.527779 | 5.2:-72194603 | MS.gene98523:CDS |
| GGCGGTTACAACCACGGTGG+AGG | 0.531542 | 5.2:-72194381 | MS.gene98523:CDS |
| TAGCCAAGAGGCCTAGGATG+AGG | 0.538496 | 5.2:+72194898 | None:intergenic |
| ATTTGTTGCCATGCAAGCTA+AGG | 0.539995 | 5.2:-72194313 | MS.gene98523:CDS |
| GGTTACAACCACGGCGGTGG+TGG | 0.544864 | 5.2:-72194639 | MS.gene98523:CDS |
| GGAGGTGGTTACAATGGTGG+TGG | 0.545650 | 5.2:-72194420 | MS.gene98523:CDS |
| GGAGGTTACAACCACGGTGG+TGG | 0.547932 | 5.2:-72194606 | MS.gene98523:CDS |
| GGTTACAACCACGGTGGAGG+TGG | 0.549674 | 5.2:-72194378 | MS.gene98523:CDS |
| GGTTACAACCATGGTGGAGG+TGG | 0.550910 | 5.2:-72194435 | MS.gene98523:CDS |
| TTCCTCAGAAGTCTCAGCTA+GGG | 0.554700 | 5.2:-72194862 | MS.gene98523:CDS |
| GGTGGTTACAACCATGGTGG+AGG | 0.556342 | 5.2:-72194438 | MS.gene98523:CDS |
| GGTGGATACAACCACGGTGG+TGG | 0.558361 | 5.2:-72194480 | MS.gene98523:CDS |
| GGTGGATACAACCACGGTGG+TGG | 0.558361 | 5.2:-72194522 | MS.gene98523:CDS |
| GGTGGATACAACCACGGTGG+TGG | 0.558361 | 5.2:-72194564 | MS.gene98523:CDS |
| CATGTGAGCAGCACCTGCCA+TGG | 0.559419 | 5.2:+72194340 | None:intergenic |
| TTTCCTCAGAAGTCTCAGCT+AGG | 0.560253 | 5.2:-72194863 | MS.gene98523:CDS |
| GGATACAACAATGGTGGAGG+TGG | 0.564967 | 5.2:-72194456 | MS.gene98523:CDS |
| CACGGCGGTGGTGGTTACAA+TGG | 0.571191 | 5.2:-72194630 | MS.gene98523:CDS |
| AACGATGCCAAATATGGTGG+AGG | 0.573315 | 5.2:-72194660 | MS.gene98523:CDS |
| GGCGGTGGTGGTTACAATGG+TGG | 0.594919 | 5.2:-72194627 | MS.gene98523:CDS |
| CATGGTGGAGGTGGTTACAA+TGG | 0.597788 | 5.2:-72194426 | MS.gene98523:CDS |
| GGTGGATACAACAATGGTGG+AGG | 0.598383 | 5.2:-72194459 | MS.gene98523:CDS |
| GGTGGATACAACAATGGTGG+AGG | 0.598383 | 5.2:-72194501 | MS.gene98523:CDS |
| GGTGGATACAACAATGGTGG+AGG | 0.598383 | 5.2:-72194543 | MS.gene98523:CDS |
| GGTGGATACAACAATGGTGG+AGG | 0.598383 | 5.2:-72194585 | MS.gene98523:CDS |
| GGTGGTGGTTACAATGGTGG+AGG | 0.609526 | 5.2:-72194624 | MS.gene98523:CDS |
| GGTGGAGGTGGTTACAATGG+TGG | 0.613370 | 5.2:-72194423 | MS.gene98523:CDS |
| AGCAGCACCTGCCATGGCAA+TGG | 0.620983 | 5.2:+72194346 | None:intergenic |
| GGTTGCCAATACCATTGCCA+TGG | 0.634007 | 5.2:-72194357 | MS.gene98523:CDS |
| GTCCCTAGCTGAGACTTCTG+AGG | 0.645915 | 5.2:+72194860 | None:intergenic |
| CATTGTAACCACCACCGCCG+TGG | 0.646466 | 5.2:+72194631 | None:intergenic |
| GTAAACGATGCCAAATATGG+TGG | 0.647144 | 5.2:-72194663 | MS.gene98523:CDS |
| CATTGTAACCACCTCCACCA+TGG | 0.649002 | 5.2:+72194427 | None:intergenic |
| TAAGAAGAACCATAGCCAAG+AGG | 0.664133 | 5.2:+72194886 | None:intergenic |
| GGTGGAGGCGGTTACAACCA+CGG | 0.674017 | 5.2:-72194387 | MS.gene98523:CDS |
| GGTGGTGGATACAACAATGG+TGG | 0.676280 | 5.2:-72194462 | MS.gene98523:CDS |
| GGTGGTGGATACAACAATGG+TGG | 0.676280 | 5.2:-72194504 | MS.gene98523:CDS |
| GGTGGTGGATACAACAATGG+TGG | 0.676280 | 5.2:-72194546 | MS.gene98523:CDS |
| GGTGGTGGATACAACAATGG+TGG | 0.676280 | 5.2:-72194588 | MS.gene98523:CDS |
| GGTGGAGGTGGTTACAACCA+TGG | 0.679817 | 5.2:-72194444 | MS.gene98523:CDS |
| GGTTGTAACCGCCTCCACCG+TGG | 0.681332 | 5.2:+72194391 | None:intergenic |
| GGTGGTGGTGGATACAACAA+TGG | 0.684345 | 5.2:-72194465 | MS.gene98523:CDS |
| GGTGGTGGTGGATACAACAA+TGG | 0.684345 | 5.2:-72194507 | MS.gene98523:CDS |
| GGTGGTGGTGGATACAACAA+TGG | 0.684345 | 5.2:-72194549 | MS.gene98523:CDS |
| GGTGGTGGTGGATACAACAA+TGG | 0.684345 | 5.2:-72194591 | MS.gene98523:CDS |
| TATGGTGGAGGTTACAACCA+CGG | 0.702708 | 5.2:-72194648 | MS.gene98523:CDS |
| AATGGTGGAGGTTACAACCA+CGG | 0.710899 | 5.2:-72194612 | MS.gene98523:CDS |
| TGTTGTATCCACCACCACCG+TGG | 0.714982 | 5.2:+72194469 | None:intergenic |
| TGTTGTATCCACCACCACCG+TGG | 0.714982 | 5.2:+72194511 | None:intergenic |
| TGTTGTATCCACCACCACCG+TGG | 0.714982 | 5.2:+72194553 | None:intergenic |
| TGTTGTATCCACCACCACCG+TGG | 0.714982 | 5.2:+72194595 | None:intergenic |
| ATTGGCAACCACCTCCACCG+TGG | 0.717584 | 5.2:+72194370 | None:intergenic |
| GGTGGAGGTGGATACAACCA+CGG | 0.728168 | 5.2:-72194486 | MS.gene98523:CDS |
| GGTGGAGGTGGATACAACCA+CGG | 0.728168 | 5.2:-72194528 | MS.gene98523:CDS |
| GGTGGAGGTGGATACAACCA+CGG | 0.728168 | 5.2:-72194570 | MS.gene98523:CDS |
| GGAGGTGGTTACAACCATGG+TGG | 0.740649 | 5.2:-72194441 | MS.gene98523:CDS |
| GGTGGTGGCTACAACCACGG+TGG | 0.783243 | 5.2:-72194405 | MS.gene98523:CDS |
| GGAGGCGGTTACAACCACGG+TGG | 0.797498 | 5.2:-72194384 | MS.gene98523:CDS |
| GGTGGAGGTTACAACCACGG+TGG | 0.812517 | 5.2:-72194609 | MS.gene98523:CDS |
| GGAGGTGGATACAACCACGG+TGG | 0.823069 | 5.2:-72194483 | MS.gene98523:CDS |
| GGAGGTGGATACAACCACGG+TGG | 0.823069 | 5.2:-72194525 | MS.gene98523:CDS |
| GGAGGTGGATACAACCACGG+TGG | 0.823069 | 5.2:-72194567 | MS.gene98523:CDS |
| GGTGGAGGTTACAACCACGG+CGG | 0.825418 | 5.2:-72194645 | MS.gene98523:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATATATAGCTCACCCTTTT+TGG | + | chr5.2:72194402-72194421 | None:intergenic | 30.0% |
| GAAGTAAACGATGCCAAATA+TGG | - | chr5.2:72194548-72194567 | MS.gene98523:CDS | 35.0% | |
| AACTACCTCTGATGCCAAAA+AGG | - | chr5.2:72194385-72194404 | MS.gene98523:CDS | 40.0% | |
| ACTACCTCTGATGCCAAAAA+GGG | - | chr5.2:72194386-72194405 | MS.gene98523:CDS | 40.0% | |
| AGAAAAGCAATCCTCATCCT+AGG | - | chr5.2:72194305-72194324 | MS.gene98523:CDS | 40.0% | |
| GTAAACGATGCCAAATATGG+TGG | - | chr5.2:72194551-72194570 | MS.gene98523:CDS | 40.0% | |
| GTTGTAACCTCCACCATATT+TGG | + | chr5.2:72194564-72194583 | None:intergenic | 40.0% | |
| TAAGAAGAACCATAGCCAAG+AGG | + | chr5.2:72194331-72194350 | None:intergenic | 40.0% | |
| ! | ATTTGTTGCCATGCAAGCTA+AGG | - | chr5.2:72194901-72194920 | MS.gene98523:CDS | 40.0% |
| AACGATGCCAAATATGGTGG+AGG | - | chr5.2:72194554-72194573 | MS.gene98523:CDS | 45.0% | |
| TTCCTCAGAAGTCTCAGCTA+GGG | - | chr5.2:72194352-72194371 | MS.gene98523:CDS | 45.0% | |
| TTTCCTCAGAAGTCTCAGCT+AGG | - | chr5.2:72194351-72194370 | MS.gene98523:CDS | 45.0% | |
| ! | AATGGTGGAGGTTACAACCA+CGG | - | chr5.2:72194602-72194621 | MS.gene98523:CDS | 45.0% |
| ! | TATGGTGGAGGTTACAACCA+CGG | - | chr5.2:72194566-72194585 | MS.gene98523:CDS | 45.0% |
| !! | AGTGTTGTCCTTAGCTTGCA+TGG | + | chr5.2:72194912-72194931 | None:intergenic | 45.0% |
| AATCCTCATCCTAGGCCTCT+TGG | - | chr5.2:72194313-72194332 | MS.gene98523:CDS | 50.0% | |
| ACCTGCCATGGCAATGGTAT+TGG | + | chr5.2:72194865-72194884 | None:intergenic | 50.0% | |
| CATTGTAACCACCTCCACCA+TGG | + | chr5.2:72194790-72194809 | None:intergenic | 50.0% | |
| GGTGGATACAACAATGGTGG+AGG | - | chr5.2:72194629-72194648 | MS.gene98523:CDS | 50.0% | |
| GGTTGCCAATACCATTGCCA+TGG | - | chr5.2:72194857-72194876 | MS.gene98523:CDS | 50.0% | |
| ! | CATGGTGGAGGTGGTTACAA+TGG | - | chr5.2:72194788-72194807 | MS.gene98523:intron | 50.0% |
| ! | GGATACAACAATGGTGGAGG+TGG | - | chr5.2:72194632-72194651 | MS.gene98523:CDS | 50.0% |
| !! | AATGGTGGTGGCTACAACCA+CGG | - | chr5.2:72194806-72194825 | MS.gene98523:intron | 50.0% |
| !! | CTCACCCTTTTTGGCATCAG+AGG | + | chr5.2:72194393-72194412 | None:intergenic | 50.0% |
| !! | GGTGGTGGATACAACAATGG+TGG | - | chr5.2:72194626-72194645 | MS.gene98523:CDS | 50.0% |
| !! | GGTGGTGGTGGATACAACAA+TGG | - | chr5.2:72194623-72194642 | MS.gene98523:CDS | 50.0% |
| CATCCTAGGCCTCTTGGCTA+TGG | - | chr5.2:72194319-72194338 | MS.gene98523:CDS | 55.0% | |
| GAACCATAGCCAAGAGGCCT+AGG | + | chr5.2:72194325-72194344 | None:intergenic | 55.0% | |
| GCCAATACCATTGCCATGGC+AGG | - | chr5.2:72194861-72194880 | MS.gene98523:CDS | 55.0% | |
| GGAGGTGGTTACAACCATGG+TGG | - | chr5.2:72194773-72194792 | MS.gene98523:intron | 55.0% | |
| GGAGGTGGTTACAATGGTGG+TGG | - | chr5.2:72194794-72194813 | MS.gene98523:intron | 55.0% | |
| GGTGGAGGTGGATACAACCA+CGG | - | chr5.2:72194644-72194663 | MS.gene98523:CDS | 55.0% | |
| GGTGGAGGTGGTTACAACCA+TGG | - | chr5.2:72194770-72194789 | MS.gene98523:intron | 55.0% | |
| GGTGGAGGTGGTTACAATGG+TGG | - | chr5.2:72194791-72194810 | MS.gene98523:intron | 55.0% | |
| GGTGGTTACAACCATGGTGG+AGG | - | chr5.2:72194776-72194795 | MS.gene98523:intron | 55.0% | |
| GTCCCTAGCTGAGACTTCTG+AGG | + | chr5.2:72194357-72194376 | None:intergenic | 55.0% | |
| TAGCCAAGAGGCCTAGGATG+AGG | + | chr5.2:72194319-72194338 | None:intergenic | 55.0% | |
| TGTTGTATCCACCACCACCG+TGG | + | chr5.2:72194622-72194641 | None:intergenic | 55.0% | |
| ! | GGTGGTGGTTACAATGGTGG+AGG | - | chr5.2:72194590-72194609 | MS.gene98523:CDS | 55.0% |
| ! | GGTTACAACCATGGTGGAGG+TGG | - | chr5.2:72194779-72194798 | MS.gene98523:intron | 55.0% |
| AGCAGCACCTGCCATGGCAA+TGG | + | chr5.2:72194871-72194890 | None:intergenic | 60.0% | |
| ATTGGCAACCACCTCCACCG+TGG | + | chr5.2:72194847-72194866 | None:intergenic | 60.0% | |
| CATGTGAGCAGCACCTGCCA+TGG | + | chr5.2:72194877-72194896 | None:intergenic | 60.0% | |
| CATTGTAACCACCACCGCCG+TGG | + | chr5.2:72194586-72194605 | None:intergenic | 60.0% | |
| GGAGGTGGATACAACCACGG+TGG | - | chr5.2:72194647-72194666 | MS.gene98523:CDS | 60.0% | |
| GGAGGTTACAACCACGGTGG+TGG | - | chr5.2:72194608-72194627 | MS.gene98523:CDS | 60.0% | |
| GGTGGAGGCGGTTACAACCA+CGG | - | chr5.2:72194827-72194846 | MS.gene98523:intron | 60.0% | |
| GGTGGAGGTTACAACCACGG+CGG | - | chr5.2:72194569-72194588 | MS.gene98523:CDS | 60.0% | |
| GGTGGAGGTTACAACCACGG+TGG | - | chr5.2:72194569-72194588 | MS.gene98523:CDS | 60.0% | |
| GGTGGATACAACCACGGTGG+TGG | - | chr5.2:72194650-72194669 | MS.gene98523:CDS | 60.0% | |
| GGTTACAACCACGGTGGAGG+TGG | - | chr5.2:72194836-72194855 | MS.gene98523:CDS | 60.0% | |
| ! | CACGGCGGTGGTGGTTACAA+TGG | - | chr5.2:72194584-72194603 | MS.gene98523:CDS | 60.0% |
| ! | GGATACAACCACGGTGGTGG+TGG | - | chr5.2:72194653-72194672 | MS.gene98523:CDS | 60.0% |
| ! | GGCGGTGGTGGTTACAATGG+TGG | - | chr5.2:72194587-72194606 | MS.gene98523:CDS | 60.0% |
| ! | GGTTACAACCACGGTGGTGG+TGG | - | chr5.2:72194611-72194630 | MS.gene98523:CDS | 60.0% |
| GGAGGCGGTTACAACCACGG+TGG | - | chr5.2:72194830-72194849 | MS.gene98523:CDS | 65.0% | |
| GGAGGTTACAACCACGGCGG+TGG | - | chr5.2:72194572-72194591 | MS.gene98523:CDS | 65.0% | |
| GGCGGTTACAACCACGGTGG+AGG | - | chr5.2:72194833-72194852 | MS.gene98523:CDS | 65.0% | |
| GGCTACAACCACGGTGGAGG+CGG | - | chr5.2:72194815-72194834 | MS.gene98523:intron | 65.0% | |
| GGTGGCTACAACCACGGTGG+AGG | - | chr5.2:72194812-72194831 | MS.gene98523:intron | 65.0% | |
| GGTTACAACCACGGCGGTGG+TGG | - | chr5.2:72194575-72194594 | MS.gene98523:CDS | 65.0% | |
| GGTTGTAACCGCCTCCACCG+TGG | + | chr5.2:72194826-72194845 | None:intergenic | 65.0% | |
| ! | GGTGGTGGCTACAACCACGG+TGG | - | chr5.2:72194809-72194828 | MS.gene98523:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 72194296 | 72194940 | 72194296 | ID=MS.gene98523 |
| chr5.2 | mRNA | 72194296 | 72194940 | 72194296 | ID=MS.gene98523.t1;Parent=MS.gene98523 |
| chr5.2 | exon | 72194829 | 72194940 | 72194829 | ID=MS.gene98523.t1.exon1;Parent=MS.gene98523.t1 |
| chr5.2 | CDS | 72194829 | 72194940 | 72194829 | ID=cds.MS.gene98523.t1;Parent=MS.gene98523.t1 |
| chr5.2 | exon | 72194296 | 72194708 | 72194296 | ID=MS.gene98523.t1.exon2;Parent=MS.gene98523.t1 |
| chr5.2 | CDS | 72194296 | 72194708 | 72194296 | ID=cds.MS.gene98523.t1;Parent=MS.gene98523.t1 |
| Gene Sequence |
| Protein sequence |
