Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98699.t1 | XP_003623416.1 | 98.6 | 278 | 4 | 0 | 1 | 278 | 232 | 509 | 1.70E-163 | 585.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98699.t1 | G7KU52 | 98.6 | 278 | 4 | 0 | 1 | 278 | 232 | 509 | 1.2e-163 | 585.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049825 | MS.gene98699 | 0.80965 | 1.70E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene98699 | 0.812952 | 3.27E-51 | -1.69E-46 |
| MS.gene050277 | MS.gene98699 | 0.82354 | 1.31E-53 | -1.69E-46 |
| MS.gene050807 | MS.gene98699 | 0.8149 | 1.22E-51 | -1.69E-46 |
| MS.gene051063 | MS.gene98699 | 0.8267 | 2.35E-54 | -1.69E-46 |
| MS.gene051687 | MS.gene98699 | 0.823687 | 1.21E-53 | -1.69E-46 |
| MS.gene051746 | MS.gene98699 | 0.829836 | 4.12E-55 | -1.69E-46 |
| MS.gene051748 | MS.gene98699 | 0.827972 | 1.16E-54 | -1.69E-46 |
| MS.gene051903 | MS.gene98699 | 0.827765 | 1.31E-54 | -1.69E-46 |
| MS.gene052133 | MS.gene98699 | 0.816409 | 5.61E-52 | -1.69E-46 |
| MS.gene052302 | MS.gene98699 | 0.839529 | 1.50E-57 | -1.69E-46 |
| MS.gene052358 | MS.gene98699 | -0.8046 | 2.00E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene98699 | 0.825698 | 4.07E-54 | -1.69E-46 |
| MS.gene052856 | MS.gene98699 | 0.819438 | 1.16E-52 | -1.69E-46 |
| MS.gene052947 | MS.gene98699 | 0.81454 | 1.46E-51 | -1.69E-46 |
| MS.gene053294 | MS.gene98699 | 0.827461 | 1.54E-54 | -1.69E-46 |
| MS.gene053437 | MS.gene98699 | 0.817036 | 4.06E-52 | -1.69E-46 |
| MS.gene053599 | MS.gene98699 | 0.800585 | 1.34E-48 | -1.69E-46 |
| MS.gene053678 | MS.gene98699 | 0.803767 | 2.98E-49 | -1.69E-46 |
| MS.gene054250 | MS.gene98699 | 0.802623 | 5.14E-49 | -1.69E-46 |
| MS.gene055174 | MS.gene98699 | 0.812987 | 3.22E-51 | -1.69E-46 |
| MS.gene055555 | MS.gene98699 | 0.814985 | 1.17E-51 | -1.69E-46 |
| MS.gene056075 | MS.gene98699 | 0.812781 | 3.57E-51 | -1.69E-46 |
| MS.gene056631 | MS.gene98699 | 0.80694 | 6.44E-50 | -1.69E-46 |
| MS.gene056830 | MS.gene98699 | -0.805561 | 1.26E-49 | -1.69E-46 |
| MS.gene057057 | MS.gene98699 | 0.820341 | 7.22E-53 | -1.69E-46 |
| MS.gene057705 | MS.gene98699 | 0.820983 | 5.14E-53 | -1.69E-46 |
| MS.gene058182 | MS.gene98699 | 0.808909 | 2.46E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene98699 | 0.814391 | 1.58E-51 | -1.69E-46 |
| MS.gene058852 | MS.gene98699 | 0.802042 | 6.77E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene98699 | 0.819153 | 1.35E-52 | -1.69E-46 |
| MS.gene059171 | MS.gene98699 | 0.800112 | 1.68E-48 | -1.69E-46 |
| MS.gene06001 | MS.gene98699 | 0.85657 | 2.94E-62 | -1.69E-46 |
| MS.gene060165 | MS.gene98699 | 0.808887 | 2.48E-50 | -1.69E-46 |
| MS.gene060619 | MS.gene98699 | 0.82728 | 1.71E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98699.t1 | MTR_7g070530 | 98.561 | 278 | 4 | 0 | 1 | 278 | 232 | 509 | 0.0 | 584 |
| MS.gene98699.t1 | MTR_4g013290 | 75.986 | 279 | 61 | 4 | 1 | 278 | 236 | 509 | 3.16e-150 | 430 |
| MS.gene98699.t1 | MTR_3g031200 | 70.039 | 257 | 70 | 2 | 28 | 278 | 239 | 494 | 4.38e-133 | 385 |
| MS.gene98699.t1 | MTR_7g101130 | 31.660 | 259 | 140 | 11 | 19 | 276 | 242 | 464 | 2.85e-30 | 118 |
| MS.gene98699.t1 | MTR_1g064690 | 25.581 | 258 | 138 | 11 | 23 | 277 | 259 | 465 | 5.56e-19 | 86.7 |
| MS.gene98699.t1 | MTR_4g093860 | 26.267 | 217 | 89 | 7 | 64 | 278 | 241 | 388 | 4.08e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98699.t1 | AT5G01710 | 70.213 | 282 | 80 | 3 | 1 | 278 | 232 | 513 | 6.55e-144 | 414 |
| MS.gene98699.t1 | AT3G53400 | 29.185 | 233 | 113 | 6 | 54 | 277 | 274 | 463 | 4.61e-25 | 103 |
| MS.gene98699.t1 | AT5G03190 | 26.172 | 256 | 138 | 6 | 25 | 277 | 241 | 448 | 1.80e-23 | 99.4 |
| MS.gene98699.t1 | AT5G03190 | 26.172 | 256 | 138 | 6 | 25 | 277 | 265 | 472 | 2.16e-23 | 99.4 |
Find 62 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACAGTTTCATGTATATA+AGG | 0.288284 | 7.1:-31387641 | None:intergenic |
| GGGGAGCATGTTGAGGTTAA+AGG | 0.290336 | 7.1:+31388097 | MS.gene98699:CDS |
| ATTCCGAGATTGTTTGAAAC+TGG | 0.306986 | 7.1:+31388286 | MS.gene98699:CDS |
| CTCCTTATGAAAATGCTTAT+CGG | 0.309551 | 7.1:-31387987 | None:intergenic |
| TGAAATGTCTTATTCTGTTT+AGG | 0.310557 | 7.1:-31387947 | None:intergenic |
| CTAGTATAGGTTCTTGGTTT+AGG | 0.310622 | 7.1:+31387915 | MS.gene98699:CDS |
| ATGGTTCTAGTATAGGTTCT+TGG | 0.339618 | 7.1:+31387909 | MS.gene98699:CDS |
| CTTTGGTTCCTTATGCTGCT+TGG | 0.341853 | 7.1:+31388032 | MS.gene98699:CDS |
| GAATGGAAATTGTTATGTTC+CGG | 0.346460 | 7.1:+31387718 | MS.gene98699:CDS |
| GATTATTATTCGAATTTGAA+TGG | 0.351180 | 7.1:+31387701 | MS.gene98699:CDS |
| AATGGAAATTGTTATGTTCC+GGG | 0.355231 | 7.1:+31387719 | MS.gene98699:CDS |
| TATAAAGTATCTTTCTTCAA+TGG | 0.364263 | 7.1:+31387832 | MS.gene98699:CDS |
| TTTGGTTCCTTATGCTGCTT+GGG | 0.368027 | 7.1:+31388033 | MS.gene98699:CDS |
| AAAAGGAACCATTGAAGCCT+TGG | 0.374178 | 7.1:+31387783 | MS.gene98699:CDS |
| TTCTTGAATGTCATTACAAT+AGG | 0.383434 | 7.1:+31388335 | MS.gene98699:CDS |
| AATGTAATCCAAGGCTTCAA+TGG | 0.393903 | 7.1:-31387791 | None:intergenic |
| GTGGAATTCTTGTTCATCAA+TGG | 0.398427 | 7.1:+31388446 | MS.gene98699:CDS |
| TCCGGGATATAAGAAAGATT+TGG | 0.413671 | 7.1:+31387736 | MS.gene98699:CDS |
| TGCTGAGCCATTGATTGAAA+AGG | 0.415041 | 7.1:+31387766 | MS.gene98699:CDS |
| TGGGGAGGTTGAGAAGATAA+AGG | 0.427305 | 7.1:+31388171 | MS.gene98699:CDS |
| AGGGAAGGGGTTTGATGGGG+AGG | 0.444105 | 7.1:+31388156 | MS.gene98699:CDS |
| GGGGAGGTTGAGAAGATAAA+GGG | 0.448534 | 7.1:+31388172 | MS.gene98699:CDS |
| TCGATAGGGAAGGGGTTTGA+TGG | 0.450774 | 7.1:+31388151 | MS.gene98699:CDS |
| AGCCTTGGATTACATTGAAA+AGG | 0.451168 | 7.1:+31387798 | MS.gene98699:CDS |
| TTCAATTCTCTTAGACAAAG+TGG | 0.459178 | 7.1:+31388427 | MS.gene98699:CDS |
| ACCAAATCTTTCTTATATCC+CGG | 0.461264 | 7.1:-31387737 | None:intergenic |
| AGAAGCTATGGTTCTAGTAT+AGG | 0.468833 | 7.1:+31387902 | MS.gene98699:CDS |
| GTTTGAGATTCATCGTGATC+CGG | 0.474286 | 7.1:+31388075 | MS.gene98699:CDS |
| TTCCGAGATTGTTTGAAACT+GGG | 0.479979 | 7.1:+31388287 | MS.gene98699:CDS |
| AGGAGTATGGGTTGAAGAAA+GGG | 0.480321 | 7.1:+31388005 | MS.gene98699:CDS |
| AAGGAGTATGGGTTGAAGAA+AGG | 0.486257 | 7.1:+31388004 | MS.gene98699:CDS |
| GATAGGGAAGGGGTTTGATG+GGG | 0.487355 | 7.1:+31388153 | MS.gene98699:CDS |
| ATTCAACCTTTGCGGTCGAT+AGG | 0.494435 | 7.1:+31388136 | MS.gene98699:CDS |
| TTTGAGATTCATCGTGATCC+GGG | 0.502701 | 7.1:+31388076 | MS.gene98699:CDS |
| AGAGATGTTGTCCTGGGCAG+AGG | 0.507298 | 7.1:+31388362 | MS.gene98699:CDS |
| GTTGAAGAAAGGGCTTACTT+TGG | 0.517477 | 7.1:+31388015 | MS.gene98699:CDS |
| CGATAGGGAAGGGGTTTGAT+GGG | 0.520667 | 7.1:+31388152 | MS.gene98699:CDS |
| TTGAATGTCATTACAATAGG+TGG | 0.524370 | 7.1:+31388338 | MS.gene98699:CDS |
| ACCTTTGCGGTCGATAGGGA+AGG | 0.531001 | 7.1:+31388141 | MS.gene98699:CDS |
| TTCAACCTTTGCGGTCGATA+GGG | 0.534099 | 7.1:+31388137 | MS.gene98699:CDS |
| TGGGTAGGATTCAACCTTTG+CGG | 0.534681 | 7.1:+31388128 | MS.gene98699:CDS |
| CATGTTGAGGTTAAAGGAAG+GGG | 0.537032 | 7.1:+31388103 | MS.gene98699:CDS |
| AGGTATATATATGTTGATGT+TGG | 0.544575 | 7.1:+31387875 | MS.gene98699:CDS |
| GAAAACTTATGATCAATGCT+TGG | 0.549157 | 7.1:+31388399 | MS.gene98699:CDS |
| TTAACCTCAACATGCTCCCC+CGG | 0.551682 | 7.1:-31388094 | None:intergenic |
| GCCCCAGTTTCAAACAATCT+CGG | 0.554909 | 7.1:-31388289 | None:intergenic |
| TCCGAGATTGTTTGAAACTG+GGG | 0.555012 | 7.1:+31388288 | MS.gene98699:CDS |
| AGGTGGCAGAGATGTTGTCC+TGG | 0.557939 | 7.1:+31388355 | MS.gene98699:CDS |
| AGCATGTTGAGGTTAAAGGA+AGG | 0.559095 | 7.1:+31388101 | MS.gene98699:CDS |
| CTTTGCGGTCGATAGGGAAG+GGG | 0.559268 | 7.1:+31388143 | MS.gene98699:CDS |
| CCTTTGCGGTCGATAGGGAA+GGG | 0.563419 | 7.1:+31388142 | MS.gene98699:CDS |
| GATGTTGGAGCTAGAAGCTA+TGG | 0.569584 | 7.1:+31387890 | MS.gene98699:CDS |
| TTGAGATTCATCGTGATCCG+GGG | 0.576008 | 7.1:+31388077 | MS.gene98699:CDS |
| TACTTCGAACTCCTCTGCCC+AGG | 0.584824 | 7.1:-31388373 | None:intergenic |
| GCATGTTGAGGTTAAAGGAA+GGG | 0.598675 | 7.1:+31388102 | MS.gene98699:CDS |
| GGTGGCAGAGATGTTGTCCT+GGG | 0.606062 | 7.1:+31388356 | MS.gene98699:CDS |
| ATGTTGAGGTTAAAGGAAGG+GGG | 0.624038 | 7.1:+31388104 | MS.gene98699:CDS |
| CCCTTCCCTATCGACCGCAA+AGG | 0.632938 | 7.1:-31388142 | None:intergenic |
| GGGAGGTTGAGAAGATAAAG+GGG | 0.638084 | 7.1:+31388173 | MS.gene98699:CDS |
| TGAGATTCATCGTGATCCGG+GGG | 0.648064 | 7.1:+31388078 | MS.gene98699:CDS |
| TGTGATGAAAATGGATGTCG+AGG | 0.663557 | 7.1:+31388246 | MS.gene98699:CDS |
| GTGATGAAAATGGATGTCGA+GGG | 0.763196 | 7.1:+31388247 | MS.gene98699:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATATAAGTTTCAAAAAT+AGG | + | chr7.1:31387855-31387874 | MS.gene98699:CDS | 15.0% |
| !! | AAAACAGTTTCATGTATATA+AGG | - | chr7.1:31387644-31387663 | None:intergenic | 20.0% |
| !! | GATTATTATTCGAATTTGAA+TGG | + | chr7.1:31387701-31387720 | MS.gene98699:CDS | 20.0% |
| !!! | TATAAAGTATCTTTCTTCAA+TGG | + | chr7.1:31387832-31387851 | MS.gene98699:CDS | 20.0% |
| ! | AGGTATATATATGTTGATGT+TGG | + | chr7.1:31387875-31387894 | MS.gene98699:CDS | 25.0% |
| ! | TTCTTGAATGTCATTACAAT+AGG | + | chr7.1:31388335-31388354 | MS.gene98699:CDS | 25.0% |
| !! | TGAAATGTCTTATTCTGTTT+AGG | - | chr7.1:31387950-31387969 | None:intergenic | 25.0% |
| !!! | TGATTTTGTTGTGATGAAAA+TGG | + | chr7.1:31388237-31388256 | MS.gene98699:CDS | 25.0% |
| AATGGAAATTGTTATGTTCC+GGG | + | chr7.1:31387719-31387738 | MS.gene98699:CDS | 30.0% | |
| ACCAAATCTTTCTTATATCC+CGG | - | chr7.1:31387740-31387759 | None:intergenic | 30.0% | |
| CTCCTTATGAAAATGCTTAT+CGG | - | chr7.1:31387990-31388009 | None:intergenic | 30.0% | |
| GAAAACTTATGATCAATGCT+TGG | + | chr7.1:31388399-31388418 | MS.gene98699:CDS | 30.0% | |
| GAATGGAAATTGTTATGTTC+CGG | + | chr7.1:31387718-31387737 | MS.gene98699:CDS | 30.0% | |
| TTCAATTCTCTTAGACAAAG+TGG | + | chr7.1:31388427-31388446 | MS.gene98699:CDS | 30.0% | |
| TTGAATGTCATTACAATAGG+TGG | + | chr7.1:31388338-31388357 | MS.gene98699:CDS | 30.0% | |
| ! | AAGCATTTTCATAAGGAGTA+TGG | + | chr7.1:31387992-31388011 | MS.gene98699:CDS | 30.0% |
| ! | AATGGTTCCTTTTCAATCAA+TGG | - | chr7.1:31387776-31387795 | None:intergenic | 30.0% |
| ! | TTCCTTTTCAATGTAATCCA+AGG | - | chr7.1:31387803-31387822 | None:intergenic | 30.0% |
| !! | AGCATTTTCATAAGGAGTAT+GGG | + | chr7.1:31387993-31388012 | MS.gene98699:CDS | 30.0% |
| AATGTAATCCAAGGCTTCAA+TGG | - | chr7.1:31387794-31387813 | None:intergenic | 35.0% | |
| AGCCTTGGATTACATTGAAA+AGG | + | chr7.1:31387798-31387817 | MS.gene98699:CDS | 35.0% | |
| CTAGTATAGGTTCTTGGTTT+AGG | + | chr7.1:31387915-31387934 | MS.gene98699:CDS | 35.0% | |
| GTGGAATTCTTGTTCATCAA+TGG | + | chr7.1:31388446-31388465 | MS.gene98699:CDS | 35.0% | |
| TCCGGGATATAAGAAAGATT+TGG | + | chr7.1:31387736-31387755 | MS.gene98699:CDS | 35.0% | |
| ! | AGCCGATAAGCATTTTCATA+AGG | + | chr7.1:31387985-31388004 | MS.gene98699:CDS | 35.0% |
| ! | ATTCCGAGATTGTTTGAAAC+TGG | + | chr7.1:31388286-31388305 | MS.gene98699:CDS | 35.0% |
| ! | TTCCGAGATTGTTTGAAACT+GGG | + | chr7.1:31388287-31388306 | MS.gene98699:CDS | 35.0% |
| !! | AGAAGCTATGGTTCTAGTAT+AGG | + | chr7.1:31387902-31387921 | MS.gene98699:CDS | 35.0% |
| !! | ATGGTTCTAGTATAGGTTCT+TGG | + | chr7.1:31387909-31387928 | MS.gene98699:CDS | 35.0% |
| AAAAGGAACCATTGAAGCCT+TGG | + | chr7.1:31387783-31387802 | MS.gene98699:CDS | 40.0% | |
| AGCATGTTGAGGTTAAAGGA+AGG | + | chr7.1:31388101-31388120 | MS.gene98699:CDS | 40.0% | |
| ATGTTGAGGTTAAAGGAAGG+GGG | + | chr7.1:31388104-31388123 | MS.gene98699:CDS | 40.0% | |
| CATGTTGAGGTTAAAGGAAG+GGG | + | chr7.1:31388103-31388122 | MS.gene98699:CDS | 40.0% | |
| GCATGTTGAGGTTAAAGGAA+GGG | + | chr7.1:31388102-31388121 | MS.gene98699:CDS | 40.0% | |
| GTGATGAAAATGGATGTCGA+GGG | + | chr7.1:31388247-31388266 | MS.gene98699:CDS | 40.0% | |
| GTTGAAGAAAGGGCTTACTT+TGG | + | chr7.1:31388015-31388034 | MS.gene98699:CDS | 40.0% | |
| TGTGATGAAAATGGATGTCG+AGG | + | chr7.1:31388246-31388265 | MS.gene98699:CDS | 40.0% | |
| ! | AAGGAGTATGGGTTGAAGAA+AGG | + | chr7.1:31388004-31388023 | MS.gene98699:CDS | 40.0% |
| ! | AGGAGTATGGGTTGAAGAAA+GGG | + | chr7.1:31388005-31388024 | MS.gene98699:CDS | 40.0% |
| ! | GTTTGAGATTCATCGTGATC+CGG | + | chr7.1:31388075-31388094 | MS.gene98699:CDS | 40.0% |
| ! | TCCGAGATTGTTTGAAACTG+GGG | + | chr7.1:31388288-31388307 | MS.gene98699:CDS | 40.0% |
| ! | TGCTGAGCCATTGATTGAAA+AGG | + | chr7.1:31387766-31387785 | MS.gene98699:CDS | 40.0% |
| ! | TTTGAGATTCATCGTGATCC+GGG | + | chr7.1:31388076-31388095 | MS.gene98699:CDS | 40.0% |
| ! | TTTGGTTCCTTATGCTGCTT+GGG | + | chr7.1:31388033-31388052 | MS.gene98699:CDS | 40.0% |
| ! | TTTTTCACCCAAGCAGCATA+AGG | - | chr7.1:31388043-31388062 | None:intergenic | 40.0% |
| !! | AGGGGTTTGATTTTGCGAAT+TGG | + | chr7.1:31388191-31388210 | MS.gene98699:CDS | 40.0% |
| ATTCAACCTTTGCGGTCGAT+AGG | + | chr7.1:31388136-31388155 | MS.gene98699:CDS | 45.0% | |
| GATGTTGGAGCTAGAAGCTA+TGG | + | chr7.1:31387890-31387909 | MS.gene98699:CDS | 45.0% | |
| GCCCCAGTTTCAAACAATCT+CGG | - | chr7.1:31388292-31388311 | None:intergenic | 45.0% | |
| GGGAGGTTGAGAAGATAAAG+GGG | + | chr7.1:31388173-31388192 | MS.gene98699:CDS | 45.0% | |
| GGGGAGGTTGAGAAGATAAA+GGG | + | chr7.1:31388172-31388191 | MS.gene98699:CDS | 45.0% | |
| TGGGGAGGTTGAGAAGATAA+AGG | + | chr7.1:31388171-31388190 | MS.gene98699:CDS | 45.0% | |
| TGGGTAGGATTCAACCTTTG+CGG | + | chr7.1:31388128-31388147 | MS.gene98699:CDS | 45.0% | |
| TTCAACCTTTGCGGTCGATA+GGG | + | chr7.1:31388137-31388156 | MS.gene98699:CDS | 45.0% | |
| TTGAGATTCATCGTGATCCG+GGG | + | chr7.1:31388077-31388096 | MS.gene98699:CDS | 45.0% | |
| ! | CTTTGGTTCCTTATGCTGCT+TGG | + | chr7.1:31388032-31388051 | MS.gene98699:CDS | 45.0% |
| CGATAGGGAAGGGGTTTGAT+GGG | + | chr7.1:31388152-31388171 | MS.gene98699:CDS | 50.0% | |
| GAGGTTAAAGGAAGGGGGAT+GGG | + | chr7.1:31388109-31388128 | MS.gene98699:CDS | 50.0% | |
| GATAGGGAAGGGGTTTGATG+GGG | + | chr7.1:31388153-31388172 | MS.gene98699:CDS | 50.0% | |
| TCGATAGGGAAGGGGTTTGA+TGG | + | chr7.1:31388151-31388170 | MS.gene98699:CDS | 50.0% | |
| TGAGATTCATCGTGATCCGG+GGG | + | chr7.1:31388078-31388097 | MS.gene98699:CDS | 50.0% | |
| TGAGGTTAAAGGAAGGGGGA+TGG | + | chr7.1:31388108-31388127 | MS.gene98699:CDS | 50.0% | |
| TTAAAGGAAGGGGGATGGGT+AGG | + | chr7.1:31388113-31388132 | MS.gene98699:CDS | 50.0% | |
| TTAACCTCAACATGCTCCCC+CGG | - | chr7.1:31388097-31388116 | None:intergenic | 50.0% | |
| ! | GGGGAGCATGTTGAGGTTAA+AGG | + | chr7.1:31388097-31388116 | MS.gene98699:CDS | 50.0% |
| ACCTTTGCGGTCGATAGGGA+AGG | + | chr7.1:31388141-31388160 | MS.gene98699:CDS | 55.0% | |
| AGAGATGTTGTCCTGGGCAG+AGG | + | chr7.1:31388362-31388381 | MS.gene98699:CDS | 55.0% | |
| AGGTGGCAGAGATGTTGTCC+TGG | + | chr7.1:31388355-31388374 | MS.gene98699:CDS | 55.0% | |
| CCTTTGCGGTCGATAGGGAA+GGG | + | chr7.1:31388142-31388161 | MS.gene98699:CDS | 55.0% | |
| CTTTGCGGTCGATAGGGAAG+GGG | + | chr7.1:31388143-31388162 | MS.gene98699:CDS | 55.0% | |
| GGTGGCAGAGATGTTGTCCT+GGG | + | chr7.1:31388356-31388375 | MS.gene98699:CDS | 55.0% | |
| TACTTCGAACTCCTCTGCCC+AGG | - | chr7.1:31388376-31388395 | None:intergenic | 55.0% | |
| AGGGAAGGGGTTTGATGGGG+AGG | + | chr7.1:31388156-31388175 | MS.gene98699:CDS | 60.0% | |
| CCCTTCCCTATCGACCGCAA+AGG | - | chr7.1:31388145-31388164 | None:intergenic | 60.0% | |
| ! | TGATCCGGGGGAGCATGTTG+AGG | + | chr7.1:31388090-31388109 | MS.gene98699:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 31387638 | 31388474 | 31387638 | ID=MS.gene98699 |
| chr7.1 | mRNA | 31387638 | 31388474 | 31387638 | ID=MS.gene98699.t1;Parent=MS.gene98699 |
| chr7.1 | exon | 31387638 | 31388474 | 31387638 | ID=MS.gene98699.t1.exon1;Parent=MS.gene98699.t1 |
| chr7.1 | CDS | 31387638 | 31388474 | 31387638 | ID=cds.MS.gene98699.t1;Parent=MS.gene98699.t1 |
| Gene Sequence |
| Protein sequence |
