Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041187.01.T01 | XP_013450213.1 | 100 | 92 | 0 | 0 | 1 | 92 | 689 | 780 | 6.48E-57 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041187.01.T01 | Q6DW76 | 85.87 | 92 | 13 | 0 | 1 | 92 | 692 | 783 | 2.14E-50 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041187.01.T01 | A0A072U4F9 | 100.000 | 92 | 0 | 0 | 1 | 92 | 689 | 780 | 3.09e-57 | 197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047944.01 | MsG0780041187.01 | 0.813855 | 2.071731e-51 | 1.368297e-48 |
| MsG0080047957.01 | MsG0780041187.01 | 0.804012 | 2.649073e-49 | 1.351047e-46 |
| MsG0080048065.01 | MsG0780041187.01 | 0.816669 | 4.908869e-52 | 3.500397e-49 |
| MsG0080048404.01 | MsG0780041187.01 | 0.808695 | 2.729739e-50 | 1.571217e-47 |
| MsG0080048462.01 | MsG0780041187.01 | 0.806161 | 9.410780e-50 | 5.072099e-47 |
| MsG0080048463.01 | MsG0780041187.01 | 0.901772 | 1.909413e-78 | 2.619192e-74 |
| MsG0080048464.01 | MsG0780041187.01 | 0.900553 | 6.527275e-78 | 8.486987e-74 |
| MsG0080048614.01 | MsG0780041187.01 | 0.806346 | 8.601936e-50 | 4.657857e-47 |
| MsG0080048683.01 | MsG0780041187.01 | 0.857686 | 1.377840e-62 | 3.429299e-59 |
| MsG0080048826.01 | MsG0780041187.01 | 0.835528 | 1.592783e-56 | 1.952853e-53 |
| MsG0080048849.01 | MsG0780041187.01 | 0.811339 | 7.357939e-51 | 4.542447e-48 |
| MsG0080048865.01 | MsG0780041187.01 | 0.803081 | 4.132472e-49 | 2.057605e-46 |
| MsG0080048888.01 | MsG0780041187.01 | 0.828628 | 8.087638e-55 | 8.083459e-52 |
| MsG0080048938.01 | MsG0780041187.01 | 0.848193 | 7.162921e-60 | 1.303975e-56 |
| MsG0080049002.01 | MsG0780041187.01 | 0.802954 | 4.389871e-49 | 2.178781e-46 |
| MsG0180000008.01 | MsG0780041187.01 | 0.805787 | 1.127793e-49 | 6.020515e-47 |
| MsG0180000091.01 | MsG0780041187.01 | 0.829242 | 5.744226e-55 | 5.845915e-52 |
| MsG0180000097.01 | MsG0780041187.01 | -0.804486 | 2.111282e-49 | 1.089885e-46 |
| MsG0180000114.01 | MsG0780041187.01 | 0.880511 | 5.167097e-70 | 2.920877e-66 |
| MsG0180000116.01 | MsG0780041187.01 | 0.802435 | 5.617319e-49 | 2.751485e-46 |
| MsG0180000159.01 | MsG0780041187.01 | 0.823635 | 1.245740e-53 | 1.078670e-50 |
| MsG0180000176.01 | MsG0780041187.01 | 0.805538 | 1.271692e-49 | 6.745085e-47 |
| MsG0180000241.01 | MsG0780041187.01 | 0.837188 | 6.023507e-57 | 7.764432e-54 |
| MsG0180000246.01 | MsG0780041187.01 | 0.806226 | 9.115561e-50 | 4.921284e-47 |
| MsG0180000470.01 | MsG0780041187.01 | 0.840355 | 9.141453e-58 | 1.298734e-54 |
| MsG0180000482.01 | MsG0780041187.01 | 0.803825 | 2.897532e-49 | 1.470642e-46 |
| MsG0180000599.01 | MsG0780041187.01 | 0.815650 | 8.291830e-52 | 5.750459e-49 |
| MsG0180000703.01 | MsG0780041187.01 | 0.805352 | 1.391428e-49 | 7.345080e-47 |
| MsG0180000777.01 | MsG0780041187.01 | 0.826835 | 2.181493e-54 | 2.069139e-51 |
| MsG0180000784.01 | MsG0780041187.01 | 0.805578 | 1.247460e-49 | 6.623498e-47 |
| MsG0180000785.01 | MsG0780041187.01 | 0.813732 | 2.205241e-51 | 1.451673e-48 |
| MsG0180000814.01 | MsG0780041187.01 | 0.880258 | 6.364141e-70 | 3.560744e-66 |
| MsG0180000914.01 | MsG0780041187.01 | 0.800404 | 1.464507e-48 | 6.813400e-46 |
| MsG0180001002.01 | MsG0780041187.01 | 0.816541 | 5.243430e-52 | 3.725768e-49 |
| MsG0180001020.01 | MsG0780041187.01 | 0.822019 | 2.963724e-53 | 2.450924e-50 |
| MsG0180001063.01 | MsG0780041187.01 | 0.823754 | 1.168166e-53 | 1.014979e-50 |
| MsG0180001088.01 | MsG0780041187.01 | 0.875190 | 3.744659e-68 | 1.733021e-64 |
| MsG0180001100.01 | MsG0780041187.01 | 0.855169 | 7.552904e-62 | 1.728089e-58 |
| MsG0180001105.01 | MsG0780041187.01 | 0.829774 | 4.263887e-55 | 4.407581e-52 |
| MsG0180001207.01 | MsG0780041187.01 | 0.803307 | 3.711063e-49 | 1.858559e-46 |
| MsG0180001886.01 | MsG0780041187.01 | 0.803265 | 3.785827e-49 | 1.893994e-46 |
| MsG0180001971.01 | MsG0780041187.01 | 0.826947 | 2.051002e-54 | 1.951872e-51 |
| MsG0180002796.01 | MsG0780041187.01 | 0.813257 | 2.805639e-51 | 1.823075e-48 |
| MsG0180002799.01 | MsG0780041187.01 | 0.810018 | 1.419857e-50 | 8.465575e-48 |
| MsG0180002955.01 | MsG0780041187.01 | 0.832372 | 9.813495e-56 | 1.094725e-52 |
| MsG0180003189.01 | MsG0780041187.01 | 0.862492 | 4.877140e-64 | 1.431112e-60 |
| MsG0180003353.01 | MsG0780041187.01 | 0.819751 | 9.854743e-53 | 7.650139e-50 |
| MsG0180003357.01 | MsG0780041187.01 | 0.878245 | 3.283683e-69 | 1.702372e-65 |
| MsG0180003510.01 | MsG0780041187.01 | 0.818085 | 2.355721e-52 | 1.746159e-49 |
| MsG0180003673.01 | MsG0780041187.01 | 0.830293 | 3.186037e-55 | 3.342586e-52 |
| MsG0180003686.01 | MsG0780041187.01 | 0.827104 | 1.880661e-54 | 1.797923e-51 |
| MsG0180003725.01 | MsG0780041187.01 | 0.868010 | 8.967872e-66 | 3.194349e-62 |
| MsG0180003807.01 | MsG0780041187.01 | 0.807847 | 4.138017e-50 | 2.329420e-47 |
| MsG0180003810.01 | MsG0780041187.01 | 0.810910 | 9.111990e-51 | 5.562563e-48 |
| MsG0180003815.01 | MsG0780041187.01 | 0.803730 | 3.032204e-49 | 1.535239e-46 |
| MsG0180003821.01 | MsG0780041187.01 | 0.822517 | 2.270362e-53 | 1.904719e-50 |
| MsG0180003885.01 | MsG0780041187.01 | 0.834370 | 3.117237e-56 | 3.691874e-53 |
| MsG0180004025.01 | MsG0780041187.01 | 0.843983 | 1.001403e-58 | 1.593821e-55 |
| MsG0180004085.01 | MsG0780041187.01 | 0.824420 | 8.149007e-54 | 7.213850e-51 |
| MsG0180004112.01 | MsG0780041187.01 | 0.802559 | 5.297710e-49 | 2.602962e-46 |
| MsG0180004246.01 | MsG0780041187.01 | 0.839676 | 1.374030e-57 | 1.911280e-54 |
| MsG0180004331.01 | MsG0780041187.01 | 0.830973 | 2.171335e-55 | 2.324012e-52 |
| MsG0180004389.01 | MsG0780041187.01 | 0.807479 | 4.954294e-50 | 2.762417e-47 |
| MsG0180004390.01 | MsG0780041187.01 | 0.807809 | 4.215267e-50 | 2.370629e-47 |
| MsG0180004396.01 | MsG0780041187.01 | 0.868666 | 5.509523e-66 | 2.009574e-62 |
| MsG0180004465.01 | MsG0780041187.01 | 0.842962 | 1.876592e-58 | 2.892051e-55 |
| MsG0180004493.01 | MsG0780041187.01 | 0.813555 | 2.412314e-51 | 1.580368e-48 |
| MsG0180004500.01 | MsG0780041187.01 | 0.844353 | 7.970396e-59 | 1.283286e-55 |
| MsG0180004725.01 | MsG0780041187.01 | 0.817707 | 2.867206e-52 | 2.103535e-49 |
| MsG0180004765.01 | MsG0780041187.01 | 0.834533 | 2.836792e-56 | 3.376318e-53 |
| MsG0180004926.01 | MsG0780041187.01 | 0.822063 | 2.894282e-53 | 2.396543e-50 |
| MsG0180005050.01 | MsG0780041187.01 | 0.804725 | 1.881997e-49 | 9.776407e-47 |
| MsG0180005169.01 | MsG0780041187.01 | 0.818908 | 1.533524e-52 | 1.162975e-49 |
| MsG0180005185.01 | MsG0780041187.01 | 0.842698 | 2.206464e-58 | 3.372632e-55 |
| MsG0180005240.01 | MsG0780041187.01 | 0.801527 | 8.632764e-49 | 4.131976e-46 |
| MsG0180005279.01 | MsG0780041187.01 | 0.809167 | 2.162909e-50 | 1.260803e-47 |
| MsG0180005292.01 | MsG0780041187.01 | 0.804105 | 2.533709e-49 | 1.295281e-46 |
| MsG0180005354.01 | MsG0780041187.01 | 0.826545 | 2.557945e-54 | 2.406098e-51 |
| MsG0180005397.01 | MsG0780041187.01 | 0.812895 | 3.367531e-51 | 2.167023e-48 |
| MsG0180005408.01 | MsG0780041187.01 | 0.814203 | 1.736107e-51 | 1.157478e-48 |
| MsG0180005418.01 | MsG0780041187.01 | 0.812282 | 4.586123e-51 | 2.903824e-48 |
| MsG0180005445.01 | MsG0780041187.01 | 0.801796 | 7.601836e-49 | 3.663421e-46 |
| MsG0180005457.01 | MsG0780041187.01 | 0.804769 | 1.842529e-49 | 9.581983e-47 |
| MsG0180005509.01 | MsG0780041187.01 | 0.818647 | 1.757639e-52 | 1.323207e-49 |
| MsG0180005730.01 | MsG0780041187.01 | 0.857408 | 1.665425e-62 | 4.106241e-59 |
| MsG0180005732.01 | MsG0780041187.01 | 0.831236 | 1.871574e-55 | 2.018715e-52 |
| MsG0180005799.01 | MsG0780041187.01 | 0.845195 | 4.724689e-59 | 7.812227e-56 |
| MsG0180005829.01 | MsG0780041187.01 | 0.831673 | 1.461219e-55 | 1.596828e-52 |
| MsG0180005960.01 | MsG0780041187.01 | 0.810736 | 9.936278e-51 | 6.037452e-48 |
| MsG0180006054.01 | MsG0780041187.01 | 0.863760 | 1.978405e-64 | 6.066750e-61 |
| MsG0180006096.01 | MsG0780041187.01 | 0.835271 | 1.848920e-56 | 2.249903e-53 |
| MsG0180006104.01 | MsG0780041187.01 | 0.858476 | 8.025518e-63 | 2.050954e-59 |
| MsG0180006134.01 | MsG0780041187.01 | 0.819432 | 1.165322e-52 | 8.965888e-50 |
| MsG0180006243.01 | MsG0780041187.01 | 0.845167 | 4.806886e-59 | 7.940683e-56 |
| MsG0180006251.01 | MsG0780041187.01 | 0.826256 | 2.998202e-54 | 2.797214e-51 |
| MsG0280006306.01 | MsG0780041187.01 | -0.819488 | 1.131104e-52 | 8.716604e-50 |
| MsG0280006309.01 | MsG0780041187.01 | 0.891097 | 5.418543e-74 | 4.685119e-70 |
| MsG0780040254.01 | MsG0780041187.01 | 0.825193 | 5.356703e-54 | 4.848860e-51 |
| MsG0780040278.01 | MsG0780041187.01 | 0.802432 | 5.626984e-49 | 2.756030e-46 |
| MsG0780040518.01 | MsG0780041187.01 | 0.810340 | 1.210399e-50 | 7.276967e-48 |
| MsG0780040559.01 | MsG0780041187.01 | -0.825109 | 5.606432e-54 | 5.062606e-51 |
| MsG0780040576.01 | MsG0780041187.01 | -0.854355 | 1.300674e-61 | 2.896762e-58 |
| MsG0780040763.01 | MsG0780041187.01 | 0.851236 | 1.012408e-60 | 2.035835e-57 |
| MsG0780040888.01 | MsG0780041187.01 | 0.849933 | 2.351901e-60 | 4.531787e-57 |
| MsG0780041015.01 | MsG0780041187.01 | -0.819987 | 8.701064e-53 | 6.799310e-50 |
| MsG0780041030.01 | MsG0780041187.01 | 0.810535 | 1.098312e-50 | 6.637419e-48 |
| MsG0780041080.01 | MsG0780041187.01 | 0.805871 | 1.082543e-49 | 5.791557e-47 |
| MsG0780041091.01 | MsG0780041187.01 | 0.879032 | 1.735052e-69 | 9.263979e-66 |
| MsG0780041187.01 | MsG0780041191.01 | 0.839703 | 1.352419e-57 | 1.882740e-54 |
| MsG0780041187.01 | MsG0780041210.01 | 0.811929 | 5.474481e-51 | 3.432912e-48 |
| MsG0780041187.01 | MsG0780041229.01 | 0.800123 | 1.670528e-48 | 7.716456e-46 |
| MsG0780041187.01 | MsG0780041301.01 | 0.850524 | 1.606324e-60 | 3.155051e-57 |
| MsG0780041187.01 | MsG0780041387.01 | 0.867825 | 1.028443e-65 | 3.639771e-62 |
| MsG0780041187.01 | MsG0780041416.01 | 0.814201 | 1.737954e-51 | 1.158642e-48 |
| MsG0780041187.01 | MsG0780041432.01 | 0.840786 | 7.048696e-58 | 1.014951e-54 |
| MsG0780041187.01 | MsG0780041435.01 | 0.828675 | 7.880578e-55 | 7.886941e-52 |
| MsG0780041187.01 | MsG0780041440.01 | 0.817518 | 3.162994e-52 | 2.308583e-49 |
| MsG0780041187.01 | MsG0780041468.01 | 0.813929 | 1.995547e-51 | 1.320589e-48 |
| MsG0780041187.01 | MsG0780041482.01 | 0.810367 | 1.193849e-50 | 7.182781e-48 |
| MsG0780041187.01 | MsG0780041491.01 | 0.822399 | 2.418812e-53 | 2.022448e-50 |
| MsG0780041187.01 | MsG0780041634.01 | 0.805772 | 1.136154e-49 | 6.062858e-47 |
| MsG0780041187.01 | MsG0780041729.01 | -0.848195 | 7.153871e-60 | 1.302383e-56 |
| MsG0780041187.01 | MsG0780041734.01 | -0.840912 | 6.534248e-58 | 9.445480e-55 |
| MsG0780041187.01 | MsG0780041747.01 | 0.836882 | 7.209618e-57 | 9.208446e-54 |
| MsG0780041187.01 | MsG0780041767.01 | 0.854042 | 1.602124e-61 | 3.532200e-58 |
| MsG0780041187.01 | MsG0880041852.01 | 0.853492 | 2.306183e-61 | 4.991997e-58 |
| MsG0780041187.01 | MsG0880041854.01 | 0.809347 | 1.978747e-50 | 1.159031e-47 |
| MsG0780041187.01 | MsG0880041861.01 | 0.836015 | 1.198466e-56 | 1.491151e-53 |
| MsG0780041187.01 | MsG0880041864.01 | 0.806855 | 6.718008e-50 | 3.685631e-47 |
| MsG0780041187.01 | MsG0880041999.01 | 0.811398 | 7.143850e-51 | 4.417443e-48 |
| MsG0780041187.01 | MsG0880042022.01 | 0.858749 | 6.650997e-63 | 1.715352e-59 |
| MsG0780041187.01 | MsG0880042031.01 | 0.832347 | 9.955468e-56 | 1.109656e-52 |
| MsG0780041187.01 | MsG0880042161.01 | 0.807957 | 3.921816e-50 | 2.214171e-47 |
| MsG0780041187.01 | MsG0880042276.01 | 0.836746 | 7.808830e-57 | 9.932619e-54 |
| MsG0780041187.01 | MsG0880042324.01 | 0.826249 | 3.008941e-54 | 2.806744e-51 |
| MsG0780041187.01 | MsG0880042434.01 | 0.801744 | 7.792186e-49 | 3.750049e-46 |
| MsG0780041187.01 | MsG0880042520.01 | 0.805356 | 1.388789e-49 | 7.332022e-47 |
| MsG0780041187.01 | MsG0880042560.01 | 0.810485 | 1.126022e-50 | 6.795898e-48 |
| MsG0780041187.01 | MsG0880042576.01 | 0.813725 | 2.212699e-51 | 1.456331e-48 |
| MsG0780041187.01 | MsG0880042622.01 | 0.868825 | 4.893622e-66 | 1.795388e-62 |
| MsG0780041187.01 | MsG0880042656.01 | 0.805113 | 1.561456e-49 | 8.192219e-47 |
| MsG0780041187.01 | MsG0880042700.01 | 0.859309 | 4.522647e-63 | 1.189137e-59 |
| MsG0780041187.01 | MsG0880042743.01 | 0.848642 | 5.380715e-60 | 9.939563e-57 |
| MsG0780041187.01 | MsG0880042857.01 | 0.828738 | 7.609069e-55 | 7.628622e-52 |
| MsG0780041187.01 | MsG0880043014.01 | 0.848358 | 6.448955e-60 | 1.180408e-56 |
| MsG0780041187.01 | MsG0880043157.01 | 0.866699 | 2.355339e-65 | 8.012732e-62 |
| MsG0780041187.01 | MsG0880043172.01 | 0.832334 | 1.003321e-55 | 1.117820e-52 |
| MsG0780041187.01 | MsG0880043430.01 | 0.814264 | 1.683177e-51 | 1.124076e-48 |
| MsG0780041187.01 | MsG0880043454.01 | 0.847643 | 1.015349e-59 | 1.816643e-56 |
| MsG0780041187.01 | MsG0880043509.01 | 0.815252 | 1.016985e-51 | 6.975448e-49 |
| MsG0780041187.01 | MsG0880043804.01 | 0.827898 | 1.213232e-54 | 1.187035e-51 |
| MsG0780041187.01 | MsG0880043955.01 | 0.807380 | 5.199082e-50 | 2.891504e-47 |
| MsG0780041187.01 | MsG0880044043.01 | 0.802865 | 4.581191e-49 | 2.268626e-46 |
| MsG0780041187.01 | MsG0880044131.01 | 0.825461 | 4.627997e-54 | 4.220891e-51 |
| MsG0780041187.01 | MsG0880044145.01 | 0.843773 | 1.139951e-58 | 1.802298e-55 |
| MsG0780041187.01 | MsG0880044573.01 | 0.814751 | 1.313406e-51 | 8.887399e-49 |
| MsG0780041187.01 | MsG0880044611.01 | -0.837856 | 4.059867e-57 | 5.342477e-54 |
| MsG0780041187.01 | MsG0880044705.01 | 0.801440 | 8.995714e-49 | 4.296225e-46 |
| MsG0780041187.01 | MsG0880044728.01 | 0.820545 | 6.481889e-53 | 5.144012e-50 |
| MsG0780041187.01 | MsG0880044885.01 | 0.812286 | 4.575769e-51 | 2.897611e-48 |
| MsG0780041187.01 | MsG0880044906.01 | 0.811813 | 5.803036e-51 | 3.627845e-48 |
| MsG0780041187.01 | MsG0880045017.01 | 0.812960 | 3.259127e-51 | 2.100793e-48 |
| MsG0780041187.01 | MsG0880045111.01 | 0.857008 | 2.187264e-62 | 5.320136e-59 |
| MsG0780041187.01 | MsG0880045285.01 | 0.832753 | 7.896811e-56 | 8.909613e-53 |
| MsG0780041187.01 | MsG0880045323.01 | 0.828755 | 7.537440e-55 | 7.560567e-52 |
| MsG0780041187.01 | MsG0880045362.01 | 0.808411 | 3.138619e-50 | 1.793321e-47 |
| MsG0780041187.01 | MsG0880045371.01 | 0.848836 | 4.753940e-60 | 8.837991e-57 |
| MsG0780041187.01 | MsG0880045387.01 | 0.866709 | 2.338017e-65 | 7.956949e-62 |
| MsG0780041187.01 | MsG0880045605.01 | -0.804377 | 2.223935e-49 | 1.144883e-46 |
| MsG0780041187.01 | MsG0880045613.01 | 0.812719 | 3.681069e-51 | 2.357867e-48 |
| MsG0780041187.01 | MsG0880045706.01 | 0.826684 | 2.370508e-54 | 2.238699e-51 |
| MsG0780041187.01 | MsG0880045736.01 | 0.804154 | 2.474811e-49 | 1.266765e-46 |
| MsG0780041187.01 | MsG0880045765.01 | 0.859006 | 5.573541e-63 | 1.450269e-59 |
| MsG0780041187.01 | MsG0880045771.01 | 0.831342 | 1.762223e-55 | 1.906897e-52 |
| MsG0780041187.01 | MsG0880045783.01 | 0.838630 | 2.566236e-57 | 3.457619e-54 |
| MsG0780041187.01 | MsG0880045926.01 | 0.839013 | 2.041930e-57 | 2.783201e-54 |
| MsG0780041187.01 | MsG0880045992.01 | 0.866360 | 3.017474e-65 | 1.014245e-61 |
| MsG0780041187.01 | MsG0880046572.01 | 0.828240 | 1.003453e-54 | 9.916529e-52 |
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| MsG0780037105.01 | MsG0780041187.01 | 0.803782 | 2.958267e-49 | 1.499781e-46 |
| MsG0780037141.01 | MsG0780041187.01 | 0.842782 | 2.095773e-58 | 3.211655e-55 |
| MsG0780037292.01 | MsG0780041187.01 | 0.810088 | 1.371345e-50 | 8.190559e-48 |
| MsG0780037330.01 | MsG0780041187.01 | 0.861266 | 1.157839e-63 | 3.257076e-60 |
| MsG0780037399.01 | MsG0780041187.01 | 0.817996 | 2.467651e-52 | 1.824800e-49 |
| MsG0780037701.01 | MsG0780041187.01 | 0.862816 | 3.875710e-64 | 1.150368e-60 |
| MsG0780037848.01 | MsG0780041187.01 | 0.815083 | 1.108664e-51 | 7.569509e-49 |
| MsG0780038092.01 | MsG0780041187.01 | 0.815228 | 1.029600e-51 | 7.057394e-49 |
| MsG0780038378.01 | MsG0780041187.01 | 0.824864 | 6.407026e-54 | 5.745489e-51 |
| MsG0780038439.01 | MsG0780041187.01 | 0.805685 | 1.184652e-49 | 6.307701e-47 |
| MsG0780038488.01 | MsG0780041187.01 | 0.818703 | 1.706821e-52 | 1.286945e-49 |
| MsG0780038644.01 | MsG0780041187.01 | 0.840597 | 7.901676e-58 | 1.131024e-54 |
| MsG0780039143.01 | MsG0780041187.01 | 0.832646 | 8.394052e-56 | 9.440779e-53 |
| MsG0780039144.01 | MsG0780041187.01 | 0.824270 | 8.837813e-54 | 7.790277e-51 |
| MsG0780039155.01 | MsG0780041187.01 | 0.806429 | 8.261759e-50 | 4.483250e-47 |
| MsG0780039170.01 | MsG0780041187.01 | 0.818709 | 1.701714e-52 | 1.283302e-49 |
| MsG0780039435.01 | MsG0780041187.01 | 0.822501 | 2.290343e-53 | 1.920498e-50 |
| MsG0780039438.01 | MsG0780041187.01 | 0.804070 | 2.577376e-49 | 1.316455e-46 |
| MsG0780039439.01 | MsG0780041187.01 | 0.838512 | 2.751303e-57 | 3.693479e-54 |
| MsG0780039443.01 | MsG0780041187.01 | 0.818286 | 2.121893e-52 | 1.581627e-49 |
| MsG0780039573.01 | MsG0780041187.01 | 0.818265 | 2.145357e-52 | 1.598146e-49 |
| MsG0780039832.01 | MsG0780041187.01 | 0.809683 | 1.675865e-50 | 9.904134e-48 |
| MsG0780039867.01 | MsG0780041187.01 | -0.877912 | 4.293487e-69 | 2.197799e-65 |
| MsG0780039964.01 | MsG0780041187.01 | 0.823946 | 1.052981e-53 | 9.198262e-51 |
| MsG0780040176.01 | MsG0780041187.01 | 0.842385 | 2.670439e-58 | 4.042607e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041187.01.T01 | MTR_7g106250 | 100.000 | 92 | 0 | 0 | 1 | 92 | 689 | 780 | 7.85e-61 | 197 |
| MsG0780041187.01.T01 | MTR_1g057700 | 68.478 | 92 | 29 | 0 | 1 | 92 | 631 | 722 | 1.76e-40 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041187.01.T01 | AT3G11670 | 58.696 | 92 | 30 | 1 | 1 | 92 | 725 | 808 | 1.81e-32 | 118 |
Find 26 sgRNAs with CRISPR-Local
Find 29 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATTTACCAGCCATAGAT+AGG | 0.417490 | 7:-87838009 | None:intergenic |
| GCAAAATCAAGTAGAGATAA+GGG | 0.432974 | 7:+87837796 | MsG0780041187.01.T01:CDS |
| TGCAAAATCAAGTAGAGATA+AGG | 0.439836 | 7:+87837795 | MsG0780041187.01.T01:CDS |
| ACGTGTCCCGGGTGTTCCTC+CGG | 0.492705 | 7:-87837929 | None:intergenic |
| AGAGATAAGGGAAAGCTCAT+TGG | 0.497125 | 7:+87837808 | MsG0780041187.01.T01:CDS |
| CTTGTCATAAACACGTGTCC+CGG | 0.502339 | 7:-87837941 | None:intergenic |
| TCTGCTAGTTCTGAAAGATT+AGG | 0.507342 | 7:-87837847 | None:intergenic |
| TCAAATCCTGAACAAGGAAA+AGG | 0.511053 | 7:+87837768 | MsG0780041187.01.T01:CDS |
| TTTGCTCACTATTGTCTCAC+AGG | 0.521736 | 7:+87837883 | MsG0780041187.01.T01:CDS |
| TTCCTCCGGTACATAATCTC+AGG | 0.522670 | 7:-87837915 | None:intergenic |
| CAGGTGGAAAGTCCTATCTA+TGG | 0.536359 | 7:+87837997 | MsG0780041187.01.T01:CDS |
| AGATAGGACTTTCCACCTGT+GGG | 0.544277 | 7:-87837993 | None:intergenic |
| TTATGTACCGGAGGAACACC+CGG | 0.551313 | 7:+87837922 | MsG0780041187.01.T01:CDS |
| TGGAAAGTCCTATCTATGGC+TGG | 0.556422 | 7:+87838001 | MsG0780041187.01.T01:CDS |
| TTGTCATAAACACGTGTCCC+GGG | 0.569933 | 7:-87837940 | None:intergenic |
| AATCTTTCAGAACTAGCAGA+TGG | 0.598240 | 7:+87837850 | MsG0780041187.01.T01:CDS |
| TAGATAGGACTTTCCACCTG+TGG | 0.599056 | 7:-87837994 | None:intergenic |
| GCTTGATCAAATCCTGAACA+AGG | 0.600933 | 7:+87837762 | MsG0780041187.01.T01:CDS |
| CTTTCAGAACTAGCAGATGG+AGG | 0.605213 | 7:+87837853 | MsG0780041187.01.T01:CDS |
| TATGTACCGGAGGAACACCC+GGG | 0.618590 | 7:+87837923 | MsG0780041187.01.T01:CDS |
| ATAGGACTTTCCACCTGTGG+GGG | 0.640769 | 7:-87837991 | None:intergenic |
| GAGTTCCTGAGATTATGTAC+CGG | 0.654856 | 7:+87837910 | MsG0780041187.01.T01:CDS |
| TTCCTGAGATTATGTACCGG+AGG | 0.656952 | 7:+87837913 | MsG0780041187.01.T01:CDS |
| TTGCTCACTATTGTCTCACA+GGG | 0.666888 | 7:+87837884 | MsG0780041187.01.T01:CDS |
| GATAGGACTTTCCACCTGTG+GGG | 0.669701 | 7:-87837992 | None:intergenic |
| ATCCTGAACAAGGAAAAGGA+TGG | 0.691634 | 7:+87837772 | MsG0780041187.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GCAAAATCAAGTAGAGATAA+GGG | + | Chr7:87837796-87837815 | MsG0780041187.01.T01:CDS | 30.0% | |
| TGCAAAATCAAGTAGAGATA+AGG | + | Chr7:87837795-87837814 | MsG0780041187.01.T01:CDS | 30.0% | |
| AATCTTTCAGAACTAGCAGA+TGG | + | Chr7:87837850-87837869 | MsG0780041187.01.T01:CDS | 35.0% | |
| TCAAATCCTGAACAAGGAAA+AGG | + | Chr7:87837768-87837787 | MsG0780041187.01.T01:CDS | 35.0% | |
| !! | TCTGCTAGTTCTGAAAGATT+AGG | - | Chr7:87837850-87837869 | None:intergenic | 35.0% |
| AGAGATAAGGGAAAGCTCAT+TGG | + | Chr7:87837808-87837827 | MsG0780041187.01.T01:CDS | 40.0% | |
| ATCCTGAACAAGGAAAAGGA+TGG | + | Chr7:87837772-87837791 | MsG0780041187.01.T01:CDS | 40.0% | |
| GAGTTCCTGAGATTATGTAC+CGG | + | Chr7:87837910-87837929 | MsG0780041187.01.T01:CDS | 40.0% | |
| GCTTGATCAAATCCTGAACA+AGG | + | Chr7:87837762-87837781 | MsG0780041187.01.T01:CDS | 40.0% | |
| TTGCTCACTATTGTCTCACA+GGG | + | Chr7:87837884-87837903 | MsG0780041187.01.T01:CDS | 40.0% | |
| TTTGCTCACTATTGTCTCAC+AGG | + | Chr7:87837883-87837902 | MsG0780041187.01.T01:CDS | 40.0% | |
| AGATAGGACTTTCCACCTGT+GGG | - | Chr7:87837996-87838015 | None:intergenic | 45.0% | |
| CAGGTGGAAAGTCCTATCTA+TGG | + | Chr7:87837997-87838016 | MsG0780041187.01.T01:CDS | 45.0% | |
| CTTGTCATAAACACGTGTCC+CGG | - | Chr7:87837944-87837963 | None:intergenic | 45.0% | |
| CTTTCAGAACTAGCAGATGG+AGG | + | Chr7:87837853-87837872 | MsG0780041187.01.T01:CDS | 45.0% | |
| TAGATAGGACTTTCCACCTG+TGG | - | Chr7:87837997-87838016 | None:intergenic | 45.0% | |
| TGGAAAGTCCTATCTATGGC+TGG | + | Chr7:87838001-87838020 | MsG0780041187.01.T01:CDS | 45.0% | |
| TTCCTCCGGTACATAATCTC+AGG | - | Chr7:87837918-87837937 | None:intergenic | 45.0% | |
| TTCCTGAGATTATGTACCGG+AGG | + | Chr7:87837913-87837932 | MsG0780041187.01.T01:CDS | 45.0% | |
| TTGTCATAAACACGTGTCCC+GGG | - | Chr7:87837943-87837962 | None:intergenic | 45.0% | |
| ! | CACCATCCTTTTCCTTGTTC+AGG | - | Chr7:87837777-87837796 | None:intergenic | 45.0% |
| ATAGGACTTTCCACCTGTGG+GGG | - | Chr7:87837994-87838013 | None:intergenic | 50.0% | |
| GATAGGACTTTCCACCTGTG+GGG | - | Chr7:87837995-87838014 | None:intergenic | 50.0% | |
| TTATGTACCGGAGGAACACC+CGG | + | Chr7:87837922-87837941 | MsG0780041187.01.T01:CDS | 50.0% | |
| CCTGTGGGGGTAAGAGATGA+AGG | - | Chr7:87837981-87838000 | None:intergenic | 55.0% | |
| CCTTCATCTCTTACCCCCAC+AGG | + | Chr7:87837978-87837997 | MsG0780041187.01.T01:CDS | 55.0% | |
| TATGTACCGGAGGAACACCC+GGG | + | Chr7:87837923-87837942 | MsG0780041187.01.T01:CDS | 55.0% | |
| TCATCTCTTACCCCCACAGG+TGG | + | Chr7:87837981-87838000 | MsG0780041187.01.T01:CDS | 55.0% | |
| ACGTGTCCCGGGTGTTCCTC+CGG | - | Chr7:87837932-87837951 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 87837748 | 87838026 | 87837748 | ID=MsG0780041187.01;Name=MsG0780041187.01 |
| Chr7 | mRNA | 87837748 | 87838026 | 87837748 | ID=MsG0780041187.01.T01;Parent=MsG0780041187.01;Name=MsG0780041187.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|92 |
| Chr7 | exon | 87837748 | 87838026 | 87837748 | ID=MsG0780041187.01.T01:exon:39484;Parent=MsG0780041187.01.T01 |
| Chr7 | CDS | 87837748 | 87838026 | 87837748 | ID=MsG0780041187.01.T01:cds;Parent=MsG0780041187.01.T01 |
| Gene Sequence |
| Protein sequence |
