Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036567.01.T01 | XP_039684187.1 | 88.462 | 52 | 6 | 0 | 1 | 52 | 247 | 298 | 3.54E-22 | 100 |
| MsG0780036567.01.T01 | XP_039684187.1 | 58.14 | 86 | 31 | 2 | 18 | 102 | 362 | 443 | 3.97E-20 | 94.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036567.01.T01 | A0A396H0H8 | 88.462 | 52 | 6 | 0 | 1 | 52 | 247 | 298 | 1.69e-22 | 100 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048016.01 | MsG0780036567.01 | 0.802622 | 5.141620e-49 | 2.530424e-46 |
| MsG0080048845.01 | MsG0780036567.01 | 0.837767 | 4.279219e-57 | 5.616121e-54 |
| MsG0080049130.01 | MsG0780036567.01 | 0.803554 | 3.298167e-49 | 1.662462e-46 |
| MsG0180000114.01 | MsG0780036567.01 | 0.803661 | 3.134589e-49 | 1.584181e-46 |
| MsG0180000159.01 | MsG0780036567.01 | 0.841100 | 5.832055e-58 | 8.478752e-55 |
| MsG0180000599.01 | MsG0780036567.01 | 0.807335 | 5.314536e-50 | 2.952263e-47 |
| MsG0180000646.01 | MsG0780036567.01 | 0.808860 | 2.516584e-50 | 1.454874e-47 |
| MsG0180000647.01 | MsG0780036567.01 | 0.807984 | 3.870291e-50 | 2.186582e-47 |
| MsG0180000843.01 | MsG0780036567.01 | 0.810977 | 8.812288e-51 | 5.389584e-48 |
| MsG0180001064.01 | MsG0780036567.01 | 0.826277 | 2.962446e-54 | 2.765616e-51 |
| MsG0180001100.01 | MsG0780036567.01 | 0.841326 | 5.084637e-58 | 7.444487e-55 |
| MsG0180001105.01 | MsG0780036567.01 | 0.828779 | 7.435597e-55 | 7.463928e-52 |
| MsG0180002399.01 | MsG0780036567.01 | 0.803871 | 2.835167e-49 | 1.440728e-46 |
| MsG0180004017.01 | MsG0780036567.01 | 0.812982 | 3.223122e-51 | 2.078873e-48 |
| MsG0180004103.01 | MsG0780036567.01 | 0.822538 | 2.245118e-53 | 1.884647e-50 |
| MsG0180004106.01 | MsG0780036567.01 | 0.802443 | 5.596690e-49 | 2.741930e-46 |
| MsG0180004188.01 | MsG0780036567.01 | 0.810602 | 1.062543e-50 | 6.432951e-48 |
| MsG0180004246.01 | MsG0780036567.01 | 0.804905 | 1.725798e-49 | 9.007095e-47 |
| MsG0180005220.01 | MsG0780036567.01 | 0.800485 | 1.409726e-48 | 6.571899e-46 |
| MsG0180005292.01 | MsG0780036567.01 | 0.828231 | 1.008665e-54 | 9.965340e-52 |
| MsG0180005418.01 | MsG0780036567.01 | 0.802341 | 5.874865e-49 | 2.870774e-46 |
| MsG0180005568.01 | MsG0780036567.01 | 0.838593 | 2.622437e-57 | 3.529363e-54 |
| MsG0180005829.01 | MsG0780036567.01 | 0.863698 | 2.067084e-64 | 6.324504e-61 |
| MsG0180006104.01 | MsG0780036567.01 | 0.814572 | 1.439170e-51 | 9.691704e-49 |
| MsG0280010564.01 | MsG0780036567.01 | 0.813666 | 2.280525e-51 | 1.498560e-48 |
| MsG0280010975.01 | MsG0780036567.01 | 0.821677 | 3.554824e-53 | 2.911560e-50 |
| MsG0280011401.01 | MsG0780036567.01 | 0.825321 | 4.996174e-54 | 4.539052e-51 |
| MsG0380012011.01 | MsG0780036567.01 | 0.803221 | 3.865762e-49 | 1.931820e-46 |
| MsG0380013050.01 | MsG0780036567.01 | -0.822659 | 2.104529e-53 | 1.772670e-50 |
| MsG0380014049.01 | MsG0780036567.01 | 0.838283 | 3.152933e-57 | 4.202556e-54 |
| MsG0380014538.01 | MsG0780036567.01 | 0.819604 | 1.064632e-52 | 8.230275e-50 |
| MsG0680030858.01 | MsG0780036567.01 | 0.812987 | 3.214978e-51 | 2.073909e-48 |
| MsG0680032006.01 | MsG0780036567.01 | 0.823523 | 1.322991e-53 | 1.141905e-50 |
| MsG0680032830.01 | MsG0780036567.01 | 0.803628 | 3.183326e-49 | 1.607531e-46 |
| MsG0680033465.01 | MsG0780036567.01 | 0.804415 | 2.184470e-49 | 1.125608e-46 |
| MsG0680034766.01 | MsG0780036567.01 | 0.803863 | 2.845682e-49 | 1.445773e-46 |
| MsG0680035307.01 | MsG0780036567.01 | 0.809208 | 2.119273e-50 | 1.236732e-47 |
| MsG0480020229.01 | MsG0780036567.01 | 0.807832 | 4.169649e-50 | 2.346313e-47 |
| MsG0480021168.01 | MsG0780036567.01 | 0.810026 | 1.414357e-50 | 8.434397e-48 |
| MsG0480021294.01 | MsG0780036567.01 | 0.820356 | 7.162679e-53 | 5.654542e-50 |
| MsG0480021564.01 | MsG0780036567.01 | 0.821976 | 3.031906e-53 | 2.504330e-50 |
| MsG0480022537.01 | MsG0780036567.01 | 0.804132 | 2.501464e-49 | 1.279658e-46 |
| MsG0480022624.01 | MsG0780036567.01 | 0.849018 | 4.230896e-60 | 7.913259e-57 |
| MsG0480022918.01 | MsG0780036567.01 | 0.828522 | 8.578504e-55 | 8.547893e-52 |
| MsG0480023261.01 | MsG0780036567.01 | 0.810732 | 9.959505e-51 | 6.050889e-48 |
| MsG0480023381.01 | MsG0780036567.01 | 0.859127 | 5.128349e-63 | 1.339730e-59 |
| MsG0480023578.01 | MsG0780036567.01 | 0.852872 | 3.471383e-61 | 7.357940e-58 |
| MsG0580024717.01 | MsG0780036567.01 | 0.862419 | 5.138175e-64 | 1.503865e-60 |
| MsG0580024759.01 | MsG0780036567.01 | 0.822622 | 2.146544e-53 | 1.806290e-50 |
| MsG0580024829.01 | MsG0780036567.01 | 0.816111 | 6.544865e-52 | 4.596314e-49 |
| MsG0580024976.01 | MsG0780036567.01 | -0.810298 | 1.235932e-50 | 7.422178e-48 |
| MsG0580025589.01 | MsG0780036567.01 | 0.802956 | 4.385518e-49 | 2.176759e-46 |
| MsG0580025625.01 | MsG0780036567.01 | 0.878712 | 2.250154e-69 | 1.187143e-65 |
| MsG0380015372.01 | MsG0780036567.01 | 0.812391 | 4.340283e-51 | 2.756278e-48 |
| MsG0380015896.01 | MsG0780036567.01 | 0.813254 | 2.808778e-51 | 1.825003e-48 |
| MsG0380015921.01 | MsG0780036567.01 | 0.815766 | 7.813694e-52 | 5.436192e-49 |
| MsG0380016762.01 | MsG0780036567.01 | 0.809109 | 2.226242e-50 | 1.295691e-47 |
| MsG0380017033.01 | MsG0780036567.01 | 0.814270 | 1.678211e-51 | 1.120964e-48 |
| MsG0380017661.01 | MsG0780036567.01 | 0.831311 | 1.794185e-55 | 1.939605e-52 |
| MsG0380017728.01 | MsG0780036567.01 | 0.800554 | 1.365093e-48 | 6.374850e-46 |
| MsG0380017931.01 | MsG0780036567.01 | 0.845013 | 5.292124e-59 | 8.700281e-56 |
| MsG0380018037.01 | MsG0780036567.01 | 0.803995 | 2.670762e-49 | 1.361538e-46 |
| MsG0580028024.01 | MsG0780036567.01 | 0.835857 | 1.314665e-56 | 1.627916e-53 |
| MsG0580028353.01 | MsG0780036567.01 | 0.800292 | 1.543568e-48 | 7.160781e-46 |
| MsG0580028925.01 | MsG0780036567.01 | 0.809862 | 1.533753e-50 | 9.106886e-48 |
| MsG0580029414.01 | MsG0780036567.01 | 0.841329 | 5.076458e-58 | 7.433217e-55 |
| MsG0680030464.01 | MsG0780036567.01 | 0.812587 | 3.933211e-51 | 2.510669e-48 |
| MsG0680030514.01 | MsG0780036567.01 | 0.840485 | 8.454902e-58 | 1.206062e-54 |
| MsG0680030680.01 | MsG0780036567.01 | 0.817250 | 3.634902e-52 | 2.633456e-49 |
| MsG0280006669.01 | MsG0780036567.01 | 0.804707 | 1.898523e-49 | 9.857096e-47 |
| MsG0280006896.01 | MsG0780036567.01 | 0.818489 | 1.908770e-52 | 1.430822e-49 |
| MsG0280006913.01 | MsG0780036567.01 | 0.800823 | 1.203099e-48 | 5.656757e-46 |
| MsG0280007756.01 | MsG0780036567.01 | 0.838980 | 2.083283e-57 | 2.836773e-54 |
| MsG0280008932.01 | MsG0780036567.01 | 0.827139 | 1.845506e-54 | 1.766128e-51 |
| MsG0280009507.01 | MsG0780036567.01 | 0.801701 | 7.953890e-49 | 3.823637e-46 |
| MsG0280009691.01 | MsG0780036567.01 | 0.803520 | 3.352879e-49 | 1.688489e-46 |
| MsG0280009756.01 | MsG0780036567.01 | 0.809456 | 1.875698e-50 | 1.101787e-47 |
| MsG0280010257.01 | MsG0780036567.01 | 0.806260 | 8.969039e-50 | 4.846314e-47 |
| MsG0280010517.01 | MsG0780036567.01 | 0.810814 | 9.560741e-51 | 5.821194e-48 |
| MsG0680035707.01 | MsG0780036567.01 | 0.804521 | 2.076215e-49 | 1.072732e-46 |
| MsG0780036517.01 | MsG0780036567.01 | 0.807150 | 5.816037e-50 | 3.215247e-47 |
| MsG0780036567.01 | MsG0780037399.01 | 0.814090 | 1.838589e-51 | 1.222070e-48 |
| MsG0780036567.01 | MsG0780037701.01 | 0.828904 | 6.935323e-55 | 6.987024e-52 |
| MsG0780036567.01 | MsG0780037946.01 | 0.812532 | 4.043484e-51 | 2.577389e-48 |
| MsG0780036567.01 | MsG0780039233.01 | 0.800915 | 1.151731e-48 | 5.428358e-46 |
| MsG0780036567.01 | MsG0780039975.01 | 0.843844 | 1.091016e-58 | 1.729015e-55 |
| MsG0780036567.01 | MsG0780040343.01 | 0.801186 | 1.014124e-48 | 4.812358e-46 |
| MsG0780036567.01 | MsG0780041004.01 | 0.809922 | 1.488872e-50 | 8.854502e-48 |
| MsG0780036567.01 | MsG0780041091.01 | 0.800068 | 1.714396e-48 | 7.908098e-46 |
| MsG0780036567.01 | MsG0780041262.01 | 0.830984 | 2.158258e-55 | 2.310808e-52 |
| MsG0780036567.01 | MsG0780041301.01 | 0.806817 | 6.843410e-50 | 3.750734e-47 |
| MsG0780036567.01 | MsG0880042343.01 | 0.810255 | 1.262267e-50 | 7.572164e-48 |
| MsG0780036567.01 | MsG0880043278.01 | 0.800867 | 1.178012e-48 | 5.545342e-46 |
| MsG0780036567.01 | MsG0880044043.01 | 0.836485 | 9.103642e-57 | 1.148842e-53 |
| MsG0780036567.01 | MsG0880044487.01 | 0.812748 | 3.626400e-51 | 2.324659e-48 |
| MsG0780036567.01 | MsG0880044538.01 | 0.802238 | 6.167282e-49 | 3.005714e-46 |
| MsG0780036567.01 | MsG0880045323.01 | 0.806501 | 7.976139e-50 | 4.336216e-47 |
| MsG0780036567.01 | MsG0880045617.01 | 0.822472 | 2.326016e-53 | 1.948820e-50 |
| MsG0780036567.01 | MsG0880046268.01 | 0.807013 | 6.217605e-50 | 3.425086e-47 |
| MsG0780036567.01 | MsG0880046533.01 | 0.807081 | 6.015241e-50 | 3.319353e-47 |
| MsG0780036567.01 | MsG0880046723.01 | 0.837754 | 4.312218e-57 | 5.657032e-54 |
| MsG0780036567.01 | MsG0880046736.01 | 0.838021 | 3.682614e-57 | 4.870695e-54 |
| MsG0780036567.01 | MsG0880047152.01 | 0.812215 | 4.743585e-51 | 2.998075e-48 |
| MsG0780036567.01 | MsG0880047306.01 | 0.824348 | 8.476334e-54 | 7.488149e-51 |
| MsG0780036567.01 | MsG0880047394.01 | 0.839348 | 1.672342e-57 | 2.303160e-54 |
| MsG0780036567.01 | MsG0880047519.01 | 0.811974 | 5.352409e-51 | 3.360664e-48 |
| MsG0780036567.01 | MsG0880047770.01 | 0.805267 | 1.449434e-49 | 7.634465e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036567.01.T01 | MTR_7g013850 | 51.724 | 87 | 37 | 2 | 17 | 102 | 364 | 446 | 3.49e-23 | 92.4 |
| MsG0780036567.01.T01 | MTR_7g013850 | 54.167 | 72 | 27 | 3 | 1 | 66 | 248 | 319 | 1.56e-17 | 76.6 |
| MsG0780036567.01.T01 | MTR_7g014670 | 63.265 | 49 | 18 | 0 | 54 | 102 | 177 | 225 | 1.24e-14 | 67.4 |
| MsG0780036567.01.T01 | MTR_7g014200 | 56.000 | 50 | 22 | 0 | 53 | 102 | 385 | 434 | 2.39e-14 | 67.4 |
| MsG0780036567.01.T01 | MTR_7g014160 | 54.000 | 50 | 23 | 0 | 53 | 102 | 390 | 439 | 7.57e-14 | 66.2 |
| MsG0780036567.01.T01 | MTR_7g014610 | 61.702 | 47 | 18 | 0 | 56 | 102 | 395 | 441 | 2.44e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 22 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACATTGTTGTCTAAATATT+TGG | 0.130040 | 7:+9908899 | MsG0780036567.01.T01:CDS |
| AACAAAAGTTGACAATTTCT+TGG | 0.251021 | 7:-9908609 | None:intergenic |
| GGAGTATATGAGATTGATTT+TGG | 0.273264 | 7:+9908975 | MsG0780036567.01.T01:CDS |
| CGAACGGAATCCTTAACTTT+TGG | 0.284718 | 7:-9908486 | None:intergenic |
| TTCTTCAATATTGTTCCATT+TGG | 0.285958 | 7:-9908565 | None:intergenic |
| CGAGCTCACACGTGAAGATT+TGG | 0.319044 | 7:+9908518 | MsG0780036567.01.T01:CDS |
| TTTCCTTGAACCAAAAGTTA+AGG | 0.387961 | 7:+9908476 | MsG0780036567.01.T01:CDS |
| TCTAAATATTTGGCTATGAT+TGG | 0.398839 | 7:+9908909 | MsG0780036567.01.T01:CDS |
| ATTCAAGGAATAGGAGTTGC+AGG | 0.408252 | 7:+9908939 | MsG0780036567.01.T01:CDS |
| GGTGAAGGAATTCAAGGAAT+AGG | 0.425888 | 7:+9908930 | MsG0780036567.01.T01:CDS |
| ACAAAAGTGTGTTGTCCAAA+TGG | 0.432381 | 7:+9908550 | MsG0780036567.01.T01:CDS |
| GTTGCAGGGTCAACAAGGTT+TGG | 0.454958 | 7:+9908954 | MsG0780036567.01.T01:CDS |
| AGTTGATAGAGGAATACAAT+TGG | 0.465205 | 7:+9909031 | MsG0780036567.01.T01:CDS |
| ATGATTGGTGAAGGAATTCA+AGG | 0.503765 | 7:+9908924 | MsG0780036567.01.T01:CDS |
| AAATGGAACAATATTGAAGA+AGG | 0.523989 | 7:+9908567 | MsG0780036567.01.T01:CDS |
| TTATGGAAGGCCTGCAAAAG+TGG | 0.524298 | 7:+9908998 | MsG0780036567.01.T01:CDS |
| GAGACAACTTCAGTTGATAG+AGG | 0.566864 | 7:+9909020 | MsG0780036567.01.T01:CDS |
| TATTTGGCTATGATTGGTGA+AGG | 0.577286 | 7:+9908915 | MsG0780036567.01.T01:CDS |
| GAGCTCGAAGGCGACTCGAA+CGG | 0.608489 | 7:-9908502 | None:intergenic |
| TAGGAGTTGCAGGGTCAACA+AGG | 0.619039 | 7:+9908949 | MsG0780036567.01.T01:CDS |
| ATCTTCACGTGTGAGCTCGA+AGG | 0.625150 | 7:-9908514 | None:intergenic |
| TTCAAGGAATAGGAGTTGCA+GGG | 0.658447 | 7:+9908940 | MsG0780036567.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAAAAACAAAAATTTTTT+TGG | + | Chr7:9908689-9908708 | MsG0780036567.01.T01:intron | 10.0% |
| !! | TTTATAGCAAATTAGAAAAA+TGG | + | Chr7:9908852-9908871 | MsG0780036567.01.T01:intron | 15.0% |
| !! | TACATTGTTGTCTAAATATT+TGG | + | Chr7:9908899-9908918 | MsG0780036567.01.T01:CDS | 20.0% |
| ! | AAATGGAACAATATTGAAGA+AGG | + | Chr7:9908567-9908586 | MsG0780036567.01.T01:CDS | 25.0% |
| ! | AACAAAAGTTGACAATTTCT+TGG | - | Chr7:9908612-9908631 | None:intergenic | 25.0% |
| ! | GCAAATTAGAAAAATGGATA+AGG | + | Chr7:9908858-9908877 | MsG0780036567.01.T01:intron | 25.0% |
| ! | TCTAAATATTTGGCTATGAT+TGG | + | Chr7:9908909-9908928 | MsG0780036567.01.T01:CDS | 25.0% |
| ! | TTCTTCAATATTGTTCCATT+TGG | - | Chr7:9908568-9908587 | None:intergenic | 25.0% |
| !! | ACAATTTCCGAAATAGTTTT+CGG | - | Chr7:9908756-9908775 | None:intergenic | 25.0% |
| !!! | AAATTTTTTTGGTTTTGCAG+TGG | + | Chr7:9908700-9908719 | MsG0780036567.01.T01:intron | 25.0% |
| !!! | TATGAGATTGATTTTGGTTA+TGG | + | Chr7:9908981-9909000 | MsG0780036567.01.T01:CDS | 25.0% |
| TTTCCTTGAACCAAAAGTTA+AGG | + | Chr7:9908476-9908495 | MsG0780036567.01.T01:CDS | 30.0% | |
| ! | AATGGATAAGGTTTTCTTGA+TGG | + | Chr7:9908870-9908889 | MsG0780036567.01.T01:intron | 30.0% |
| ! | CAATTTCCGAAATAGTTTTC+GGG | - | Chr7:9908755-9908774 | None:intergenic | 30.0% |
| !! | AGTTGATAGAGGAATACAAT+TGG | + | Chr7:9909031-9909050 | MsG0780036567.01.T01:CDS | 30.0% |
| !! | GGAGTATATGAGATTGATTT+TGG | + | Chr7:9908975-9908994 | MsG0780036567.01.T01:CDS | 30.0% |
| !!! | AATCCTTAACTTTTGGTTCA+AGG | - | Chr7:9908482-9908501 | None:intergenic | 30.0% |
| !!! | AGATTGATTTTGGTTATGGA+AGG | + | Chr7:9908985-9909004 | MsG0780036567.01.T01:CDS | 30.0% |
| ATGATTGGTGAAGGAATTCA+AGG | + | Chr7:9908924-9908943 | MsG0780036567.01.T01:CDS | 35.0% | |
| CCAATTCCCGAAAACTATTT+CGG | + | Chr7:9908746-9908765 | MsG0780036567.01.T01:intron | 35.0% | |
| TATTTGGCTATGATTGGTGA+AGG | + | Chr7:9908915-9908934 | MsG0780036567.01.T01:CDS | 35.0% | |
| ! | ACAAAAGTGTGTTGTCCAAA+TGG | + | Chr7:9908550-9908569 | MsG0780036567.01.T01:CDS | 35.0% |
| !! | AAATAGTTTTCGGGAATTGG+TGG | - | Chr7:9908746-9908765 | None:intergenic | 35.0% |
| !! | GTTTGCTTTTGCTATGCAAA+CGG | - | Chr7:9908654-9908673 | None:intergenic | 35.0% |
| AATCACTACTCCATCTTCCT+TGG | - | Chr7:9908819-9908838 | None:intergenic | 40.0% | |
| ATTCAAGGAATAGGAGTTGC+AGG | + | Chr7:9908939-9908958 | MsG0780036567.01.T01:CDS | 40.0% | |
| GAAGACTTTACCAAGGAAGA+TGG | + | Chr7:9908806-9908825 | MsG0780036567.01.T01:intron | 40.0% | |
| GGTGAAGGAATTCAAGGAAT+AGG | + | Chr7:9908930-9908949 | MsG0780036567.01.T01:CDS | 40.0% | |
| TCTTCCTTGGTAAAGTCTTC+TGG | - | Chr7:9908806-9908825 | None:intergenic | 40.0% | |
| TTCAAGGAATAGGAGTTGCA+GGG | + | Chr7:9908940-9908959 | MsG0780036567.01.T01:CDS | 40.0% | |
| ! | CGAACGGAATCCTTAACTTT+TGG | - | Chr7:9908489-9908508 | None:intergenic | 40.0% |
| !! | CCGAAATAGTTTTCGGGAAT+TGG | - | Chr7:9908749-9908768 | None:intergenic | 40.0% |
| !! | GAGACAACTTCAGTTGATAG+AGG | + | Chr7:9909020-9909039 | MsG0780036567.01.T01:CDS | 40.0% |
| TGAGCCAGAAGACTTTACCA+AGG | + | Chr7:9908799-9908818 | MsG0780036567.01.T01:intron | 45.0% | |
| TTATGGAAGGCCTGCAAAAG+TGG | + | Chr7:9908998-9909017 | MsG0780036567.01.T01:CDS | 45.0% | |
| !! | GAAGTTGTCTCCACTTTTGC+AGG | - | Chr7:9909011-9909030 | None:intergenic | 45.0% |
| ATCTTCACGTGTGAGCTCGA+AGG | - | Chr7:9908517-9908536 | None:intergenic | 50.0% | |
| CGAGCTCACACGTGAAGATT+TGG | + | Chr7:9908518-9908537 | MsG0780036567.01.T01:CDS | 50.0% | |
| GTTGCAGGGTCAACAAGGTT+TGG | + | Chr7:9908954-9908973 | MsG0780036567.01.T01:CDS | 50.0% | |
| TAGGAGTTGCAGGGTCAACA+AGG | + | Chr7:9908949-9908968 | MsG0780036567.01.T01:CDS | 50.0% | |
| GAGCTCGAAGGCGACTCGAA+CGG | - | Chr7:9908505-9908524 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 9908468 | 9909058 | 9908468 | ID=MsG0780036567.01;Name=MsG0780036567.01 |
| Chr7 | mRNA | 9908468 | 9909058 | 9908468 | ID=MsG0780036567.01.T01;Parent=MsG0780036567.01;Name=MsG0780036567.01.T01;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|1|1|2|0|103 |
| Chr7 | exon | 9908468 | 9908618 | 9908468 | ID=MsG0780036567.01.T01:exon:1555;Parent=MsG0780036567.01.T01 |
| Chr7 | exon | 9908898 | 9909058 | 9908898 | ID=MsG0780036567.01.T01:exon:1556;Parent=MsG0780036567.01.T01 |
| Chr7 | CDS | 9908468 | 9908618 | 9908468 | ID=MsG0780036567.01.T01:cds;Parent=MsG0780036567.01.T01 |
| Chr7 | CDS | 9908898 | 9909058 | 9908898 | ID=MsG0780036567.01.T01:cds;Parent=MsG0780036567.01.T01 |
| Gene Sequence |
| Protein sequence |
