AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011744.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011744.01.T01 MTR_3g010170 94.271 384 21 1 6 389 89 471 0.0 748
MsG0380011744.01.T01 MTR_8g070520 73.867 375 93 3 15 389 108 477 0.0 583
MsG0380011744.01.T01 MTR_8g070520 74.432 352 85 3 15 366 108 454 0.0 548
MsG0380011744.01.T01 MTR_7g026230 31.313 297 180 9 97 385 91 371 3.27e-43 155
MsG0380011744.01.T01 MTR_2g096840 30.640 297 182 9 97 385 91 371 5.83e-42 151
MsG0380011744.01.T01 MTR_6g004000 29.966 297 184 9 97 385 91 371 5.89e-42 151
MsG0380011744.01.T01 MTR_0015s0130 30.405 296 184 8 97 385 91 371 4.23e-41 149
MsG0380011744.01.T01 MTR_2g008050 30.986 284 174 8 97 373 91 359 6.41e-41 149
MsG0380011744.01.T01 MTR_3g095530 32.042 284 169 9 97 372 91 358 9.31e-41 148
MsG0380011744.01.T01 MTR_7g093260 30.068 296 185 8 97 385 91 371 1.37e-40 147
MsG0380011744.01.T01 MTR_7g027185 26.351 296 178 11 99 372 92 369 1.76e-22 98.2
MsG0380011744.01.T01 MTR_7g027185 28.049 246 147 9 99 332 92 319 2.32e-22 97.8
MsG0380011744.01.T01 MTR_7g027185 26.667 240 146 9 99 326 92 313 7.95e-19 86.7
MsG0380011744.01.T01 MTR_3g030550 24.823 282 184 11 111 382 90 353 3.32e-17 82.8
MsG0380011744.01.T01 MTR_8g089630 24.125 257 163 9 98 335 110 353 5.78e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011744.01.T01 AT5G56180 73.239 355 94 1 31 385 116 469 0.0 563
MsG0380011744.01.T01 AT5G56180 71.336 307 87 1 79 385 32 337 8.96e-171 480
MsG0380011744.01.T01 AT5G56180 76.800 250 57 1 31 280 116 364 5.59e-141 407
MsG0380011744.01.T01 AT3G12110 31.313 297 180 9 97 385 91 371 1.95e-43 155
MsG0380011744.01.T01 AT2G42090 30.952 294 176 10 97 381 80 355 2.62e-42 152
MsG0380011744.01.T01 AT3G53750 30.303 297 183 9 97 385 91 371 1.13e-41 150
MsG0380011744.01.T01 AT3G53750 30.303 297 183 9 97 385 91 371 1.13e-41 150
MsG0380011744.01.T01 AT2G37620 30.303 297 183 9 97 385 91 371 1.13e-41 150
MsG0380011744.01.T01 AT2G37620 30.303 297 183 9 97 385 91 371 1.13e-41 150
MsG0380011744.01.T01 AT2G37620 30.303 297 183 9 97 385 91 371 1.13e-41 150
MsG0380011744.01.T01 AT2G37620 30.303 297 183 9 97 385 91 371 1.13e-41 150
MsG0380011744.01.T01 AT5G09810 31.081 296 182 8 97 385 91 371 5.99e-41 149
MsG0380011744.01.T01 AT2G42100 29.352 293 183 9 97 381 92 368 1.18e-39 145
MsG0380011744.01.T01 AT3G46520 29.630 297 185 8 97 385 91 371 2.78e-39 144
MsG0380011744.01.T01 AT3G46520 29.630 297 185 8 97 385 91 371 2.78e-39 144
MsG0380011744.01.T01 AT5G59370 29.293 297 186 8 97 385 91 371 9.81e-39 143
MsG0380011744.01.T01 AT5G59370 29.293 297 186 8 97 385 91 371 9.81e-39 143
MsG0380011744.01.T01 AT3G18780 30.634 284 173 9 97 372 91 358 9.81e-39 143
MsG0380011744.01.T01 AT3G18780 30.634 284 173 9 97 372 91 358 9.81e-39 143
MsG0380011744.01.T01 AT1G49240 30.634 284 173 9 97 372 91 358 1.00e-38 143
MsG0380011744.01.T01 AT3G18780 30.714 280 170 9 97 368 91 354 6.77e-38 140
MsG0380011744.01.T01 AT2G42170 27.907 301 188 9 94 385 43 323 1.61e-36 135
MsG0380011744.01.T01 AT2G42170 27.907 301 188 9 94 385 43 323 1.61e-36 135
MsG0380011744.01.T01 AT2G42170 28.873 284 173 9 94 368 43 306 4.49e-35 131
MsG0380011744.01.T01 AT2G42170 28.873 284 173 9 94 368 43 306 4.49e-35 131
MsG0380011744.01.T01 AT2G42170 29.075 227 143 6 167 385 9 225 5.02e-27 107
MsG0380011744.01.T01 AT3G27000 24.538 379 215 14 50 372 6 369 5.95e-21 94.0
MsG0380011744.01.T01 AT3G60830 25.979 281 179 10 111 381 91 352 1.68e-19 89.4
MsG0380011744.01.T01 AT1G13180 22.601 323 203 13 92 381 103 411 1.98e-12 68.6

Find 104 sgRNAs with CRISPR-Local

Find 530 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAATCTCAAAAGTGATATT+TGG 0.176810 3:-4394738 None:intergenic
CTGTCATTCAAACATATTTA+TGG 0.206225 3:+4386273 MsG0380011744.01.T01:CDS
TGTACAATGATTGAAAATTT+AGG 0.234560 3:-4392756 None:intergenic
ATTCTGCACCCTCCAACTTT+AGG 0.242008 3:+4394648 MsG0380011744.01.T01:three_prime_UTR
TGAGCACATTTCCTGGTTCT+TGG 0.255805 3:+4394531 MsG0380011744.01.T01:CDS
GGTTCCGGCTATTGCAAATT+TGG 0.256929 3:+4386425 MsG0380011744.01.T01:CDS
TTCTGCACCCTCCAACTTTA+GGG 0.267008 3:+4394649 MsG0380011744.01.T01:three_prime_UTR
CCTGGTGCTATTATCATTGA+TGG 0.305349 3:+4386312 MsG0380011744.01.T01:CDS
TTTAGGGAGGCTGGAATAAT+AGG 0.307504 3:+4394665 MsG0380011744.01.T01:three_prime_UTR
TGAGGCCGAGCCTAGGCTTC+TGG 0.337824 3:-4394577 None:intergenic
TCTGGAATAGCTGTTAATAT+AGG 0.337868 3:+4392296 MsG0380011744.01.T01:CDS
AACTGCATGTTTGCCAGGTT+TGG 0.340994 3:+4393531 MsG0380011744.01.T01:CDS
AGCAAATATGCTTGTCCATC+GGG 0.346514 3:+4386452 MsG0380011744.01.T01:CDS
GGTCAGAGAGCTCAGGTTCC+TGG 0.353049 3:+4386294 MsG0380011744.01.T01:CDS
TATGCTGCAAAACGAACTTC+TGG 0.356150 3:+4392278 MsG0380011744.01.T01:CDS
TGAATGACAGCTGGGGCCTC+TGG 0.370029 3:-4386260 None:intergenic
TTATTCAAGCCACATCTTGC+TGG 0.370601 3:+4393029 MsG0380011744.01.T01:CDS
CTGGGAGCACTGAAAGTTAC+AGG 0.382783 3:+4392703 MsG0380011744.01.T01:CDS
GAAAGTTACAGGATTTCTTA+AGG 0.385828 3:+4392714 MsG0380011744.01.T01:CDS
CAGGAACATTCAAGTCGAAC+AGG 0.394489 3:-4391658 None:intergenic
CGGTGTGGAAGTTGTGGGAC+TGG 0.402375 3:+4392684 MsG0380011744.01.T01:CDS
CCCTCCAACTTTAGGGAGGC+TGG 0.409889 3:+4394656 MsG0380011744.01.T01:three_prime_UTR
GTACAGTTGAGCACATTTCC+TGG 0.411777 3:+4394524 MsG0380011744.01.T01:intron
TCCGTGAATTGCAGATCCTT+TGG 0.415733 3:+4386237 MsG0380011744.01.T01:CDS
GGTGTGGAAGTTGTGGGACT+GGG 0.427025 3:+4392685 MsG0380011744.01.T01:CDS
TTACCATCATAATGGCATAT+TGG 0.430990 3:-4387978 None:intergenic
GGAGGAACTGCATGTTTGCC+AGG 0.432955 3:+4393526 MsG0380011744.01.T01:CDS
TTTCGAGTACTTCAAATCCT+TGG 0.433199 3:-4394845 None:intergenic
CTAATTCCATTGGACATGTA+TGG 0.441876 3:-4394011 None:intergenic
CCGGCTATTGCAAATTTGGT+TGG 0.449861 3:+4386429 MsG0380011744.01.T01:CDS
AGCCTAGGCTCGGCCTCATA+TGG 0.450315 3:+4394582 MsG0380011744.01.T01:CDS
TGCCATTCTGCAGGATTACC+AGG 0.453869 3:+4393469 MsG0380011744.01.T01:CDS
CACTGTTCGCGCTTTGAAAG+AGG 0.459873 3:+4392777 MsG0380011744.01.T01:CDS
AACTATAGATATTATGATAT+AGG 0.461050 3:+4394715 MsG0380011744.01.T01:three_prime_UTR
CCAGGCCATAGCTCGTTGTA+TGG 0.462389 3:+4393441 MsG0380011744.01.T01:CDS
AAGTTGTTGTCTCGATGCTC+TGG 0.463461 3:-4391615 None:intergenic
AACAAAATAATCACCATATG+AGG 0.466238 3:-4394595 None:intergenic
GCATGTTTGCCAGGTTTGGC+AGG 0.469643 3:+4393535 MsG0380011744.01.T01:CDS
AAATATGTTTGAATGACAGC+TGG 0.475153 3:-4386269 None:intergenic
TTGATTTCTCGGCAGGATGC+AGG 0.481990 3:+4387920 MsG0380011744.01.T01:intron
TGCTGTTTGTGCTGTCAACC+AGG 0.484017 3:+4391679 MsG0380011744.01.T01:CDS
AATGTAACTTACCATCATAA+TGG 0.484345 3:-4387986 None:intergenic
TATTCCAGCCTCCCTAAAGT+TGG 0.484385 3:-4394660 None:intergenic
TCATTTCAAGCTACAGGAGA+TGG 0.489367 3:+4392963 MsG0380011744.01.T01:CDS
ATGGAGAATTGCCATTCTGC+AGG 0.493934 3:+4393460 MsG0380011744.01.T01:CDS
TCCAGCCTCCCTAAAGTTGG+AGG 0.502536 3:-4394657 None:intergenic
TTGAGTCGCCAATGTATACT+AGG 0.505523 3:+4387061 MsG0380011744.01.T01:CDS
GCCAAAGGATCTGCAATTCA+CGG 0.507616 3:-4386238 None:intergenic
ATTGGTATAGAAACAATAAC+CGG 0.510568 3:-4387960 None:intergenic
AGAAGTTCCGCCAGAAGCCT+AGG 0.514084 3:+4394567 MsG0380011744.01.T01:CDS
CAAGCATCATTTCAAGCTAC+AGG 0.515742 3:+4392957 MsG0380011744.01.T01:CDS
ATTTCCTGGTTCTTGGTGTG+TGG 0.517934 3:+4394538 MsG0380011744.01.T01:CDS
AAACATTTACCTGCCAAACC+TGG 0.518419 3:-4393544 None:intergenic
CCATACAACGAGCTATGGCC+TGG 0.521337 3:-4393441 None:intergenic
TAAGGTCGGTGTGGAAGTTG+TGG 0.524103 3:+4392678 MsG0380011744.01.T01:CDS
AAGGTCGGTGTGGAAGTTGT+GGG 0.524892 3:+4392679 MsG0380011744.01.T01:CDS
TTGATGGGTCTAGAGATGAT+TGG 0.531384 3:+4386184 MsG0380011744.01.T01:CDS
TATTTATGGTCAGAGAGCTC+AGG 0.532621 3:+4386287 MsG0380011744.01.T01:CDS
TGGTTCGGAGCAAAGATGAT+TGG 0.533936 3:+4394068 MsG0380011744.01.T01:CDS
CCAACCAAATTTGCAATAGC+CGG 0.539236 3:-4386429 None:intergenic
GAGCAAATATGCTTGTCCAT+CGG 0.539547 3:+4386451 MsG0380011744.01.T01:CDS
CATACGGTGTCGATACTCAA+TGG 0.542865 3:+4394048 MsG0380011744.01.T01:CDS
TAATGGTAAAGTAATGCGTA+AGG 0.544895 3:+4392660 MsG0380011744.01.T01:CDS
GATTACCAGGTGACAACGAT+TGG 0.546596 3:+4393482 MsG0380011744.01.T01:CDS
TTGTACAGAAAGATTAGAGA+AGG 0.552480 3:+4393968 MsG0380011744.01.T01:intron
CACCATATGAGGCCGAGCCT+AGG 0.553488 3:-4394584 None:intergenic
CAGCTGGGGCCTCTGGCCAA+AGG 0.557706 3:-4386253 None:intergenic
GGTGTCGATACTCAATGGTT+CGG 0.558157 3:+4394053 MsG0380011744.01.T01:CDS
ATACCAATATGCCATTATGA+TGG 0.560403 3:+4387975 MsG0380011744.01.T01:CDS
TTGTACCAATCGTTGTCACC+TGG 0.561702 3:-4393487 None:intergenic
CTTCCTCCATACATGTCCAA+TGG 0.567153 3:+4394005 MsG0380011744.01.T01:CDS
CATTGAGTATCGACACCGTA+TGG 0.567226 3:-4394047 None:intergenic
TGTTTACACTTTCAAAAGAG+AGG 0.571091 3:+4392988 MsG0380011744.01.T01:CDS
AGGTATGACTCTAATTCCAT+TGG 0.572150 3:-4394021 None:intergenic
ATTCTCCATACAACGAGCTA+TGG 0.573708 3:-4393446 None:intergenic
AATATGTTTGAATGACAGCT+GGG 0.574569 3:-4386268 None:intergenic
AATATGATTGAAAATATCCA+AGG 0.585942 3:+4394828 MsG0380011744.01.T01:three_prime_UTR
TGGTTGACAGCACAAACAGC+AGG 0.587707 3:-4391677 None:intergenic
AATGTTGCAGATCGCCCCGA+TGG 0.593723 3:-4386467 None:intergenic
CACCTGGTAATCCTGCAGAA+TGG 0.600972 3:-4393471 None:intergenic
TTCCGCCAGAAGCCTAGGCT+CGG 0.603172 3:+4394572 MsG0380011744.01.T01:CDS
CAGAATAATTTACACTATCG+AGG 0.604138 3:-4394631 None:intergenic
CCATCAATGATAATAGCACC+AGG 0.611496 3:-4386312 None:intergenic
TATGGCCTGGTGTAAACCTA+CGG 0.612970 3:-4393428 None:intergenic
TCTTGGTATAGGCAAGCCGT+AGG 0.613936 3:+4393412 MsG0380011744.01.T01:intron
GGCCGAGCCTAGGCTTCTGG+CGG 0.615411 3:-4394574 None:intergenic
GTATCGACACCGTATGGAGG+AGG 0.616538 3:-4394041 None:intergenic
AGAGTCATACCTCCTCCATA+CGG 0.619890 3:+4394032 MsG0380011744.01.T01:CDS
TGCACCCTCCAACTTTAGGG+AGG 0.623496 3:+4394652 MsG0380011744.01.T01:three_prime_UTR
GGTAAAGTAATGCGTAAGGT+CGG 0.623567 3:+4392664 MsG0380011744.01.T01:CDS
ATTGCAGATCCTTTGGCCAG+AGG 0.623599 3:+4386244 MsG0380011744.01.T01:CDS
TGTCGAAGCCTAGTATACAT+TGG 0.632551 3:-4387069 None:intergenic
CCAGCCTCCCTAAAGTTGGA+GGG 0.636770 3:-4394656 None:intergenic
AGGAACATTCAAGTCGAACA+GGG 0.639526 3:-4391657 None:intergenic
ACTTACACTCCAGCAAGATG+TGG 0.640629 3:-4393038 None:intergenic
AAGGATCTGCAATTCACGGA+CGG 0.643374 3:-4386234 None:intergenic
ATTCCATTGGACATGTATGG+AGG 0.644464 3:-4394008 None:intergenic
TGTATGGAGGAAGTAAGCCA+TGG 0.649099 3:-4393995 None:intergenic
TGAGTATCGACACCGTATGG+AGG 0.656190 3:-4394044 None:intergenic
AGATTAGAGAAGGAACTCCA+TGG 0.658596 3:+4393978 MsG0380011744.01.T01:CDS
GCAAATATGCTTGTCCATCG+GGG 0.676281 3:+4386453 MsG0380011744.01.T01:CDS
GCAAGCCGTAGGTTTACACC+AGG 0.677496 3:+4393423 MsG0380011744.01.T01:CDS
AGTAATGCGTAAGGTCGGTG+TGG 0.683151 3:+4392669 MsG0380011744.01.T01:CDS
ATATGTTTGAATGACAGCTG+GGG 0.703396 3:-4386267 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTATATTTTAATTAGGA+GGG - Chr3:4386964-4386983 None:intergenic 10.0%
!!! TATATTATATTTTAATTAGG+AGG - Chr3:4386965-4386984 None:intergenic 10.0%
!!! TTATATATTTTGAAAAATGT+AGG + Chr3:4392241-4392260 MsG0380011744.01.T01:intron 10.0%
!! AACTATAGATATTATGATAT+AGG + Chr3:4394715-4394734 MsG0380011744.01.T01:three_prime_UTR 15.0%
!! AGATATGTTTATGATTATTA+TGG - Chr3:4388534-4388553 None:intergenic 15.0%
!! ATAAAAGAGAAATTCAATTA+TGG - Chr3:4388815-4388834 None:intergenic 15.0%
!! ATGTATTTGTGTTATAAATA+GGG - Chr3:4386892-4386911 None:intergenic 15.0%
!! CAAAATATTGTAAAAGAAAA+CGG + Chr3:4387500-4387519 MsG0380011744.01.T01:intron 15.0%
!! TATATTCTCTTAAGTTTATT+AGG + Chr3:4387541-4387560 MsG0380011744.01.T01:intron 15.0%
!! TATGTATTTGTGTTATAAAT+AGG - Chr3:4386893-4386912 None:intergenic 15.0%
!!! AAATTGAGAAATTTTAGTTA+TGG - Chr3:4388662-4388681 None:intergenic 15.0%
!!! AAGTGTTTTTAGAAAATTAA+CGG - Chr3:4387294-4387313 None:intergenic 15.0%
!!! AAGTTATGTTTAGAATAAAT+TGG - Chr3:4388726-4388745 None:intergenic 15.0%
!!! ATCTTGATGATAAATATTTT+AGG + Chr3:4394109-4394128 MsG0380011744.01.T01:intron 15.0%
!!! ATTGATTTTGAATTTTTAGA+CGG - Chr3:4390218-4390237 None:intergenic 15.0%
!!! GGTTATATATTGTTTTAATT+AGG - Chr3:4386940-4386959 None:intergenic 15.0%
!!! GTTTTTATATTTTCACTTAT+TGG + Chr3:4393367-4393386 MsG0380011744.01.T01:intron 15.0%
!!! TCCCTTATTTAAAAATATTA+GGG - Chr3:4387607-4387626 None:intergenic 15.0%
!!! TTAATTACAAATTTTCTGTT+TGG + Chr3:4392874-4392893 MsG0380011744.01.T01:intron 15.0%
!!! TTCCCTTATTTAAAAATATT+AGG - Chr3:4387608-4387627 None:intergenic 15.0%
!!! TTTGAAATTGTAATATATAG+AGG - Chr3:4390796-4390815 None:intergenic 15.0%
!! AAAATGAAAACAAAAACATG+AGG + Chr3:4387571-4387590 MsG0380011744.01.T01:intron 20.0%
!! AAATTGTATAAACCCAAAAT+GGG - Chr3:4388393-4388412 None:intergenic 20.0%
!! AATATGATTGAAAATATCCA+AGG + Chr3:4394828-4394847 MsG0380011744.01.T01:three_prime_UTR 20.0%
!! AATGCTTAAATAAAAGGATA+TGG - Chr3:4391833-4391852 None:intergenic 20.0%
!! AGAACAACATAAAAATGATT+AGG - Chr3:4387878-4387897 None:intergenic 20.0%
!! AGTAGTTAATAGAATGAAAA+AGG - Chr3:4393237-4393256 None:intergenic 20.0%
!! ATAACTTTCATGTTAATATG+CGG + Chr3:4388739-4388758 MsG0380011744.01.T01:intron 20.0%
!! ATAATTTCAACTTATGCAAT+TGG + Chr3:4390190-4390209 MsG0380011744.01.T01:intron 20.0%
!! ATATTTATCATCAAGATAGT+AGG - Chr3:4394106-4394125 None:intergenic 20.0%
!! ATTCATTACGGATTTATTAT+AGG + Chr3:4387676-4387695 MsG0380011744.01.T01:intron 20.0%
!! GAAAATATAAAAACTAACAG+AGG - Chr3:4393361-4393380 None:intergenic 20.0%
!! GTCATAAATGCTTAAATAAA+AGG - Chr3:4391839-4391858 None:intergenic 20.0%
!! TAAAAAATTCAGTTATTGCA+AGG - Chr3:4393750-4393769 None:intergenic 20.0%
!! TAACAACAAATAAAAGAAGT+CGG - Chr3:4392205-4392224 None:intergenic 20.0%
!! TAATCTTTCTGTACAAAATA+TGG - Chr3:4393964-4393983 None:intergenic 20.0%
!! TATGATGCTAATATAAATGT+TGG - Chr3:4389369-4389388 None:intergenic 20.0%
!! TATGCAACTAAAGATAAATA+TGG + Chr3:4391875-4391894 MsG0380011744.01.T01:intron 20.0%
!! TATTTATCATCAAGATAGTA+GGG - Chr3:4394105-4394124 None:intergenic 20.0%
!! TGATTTACAAAGTTATTGTA+TGG + Chr3:4388012-4388031 MsG0380011744.01.T01:intron 20.0%
!! TGTACAATGATTGAAAATTT+AGG - Chr3:4392759-4392778 None:intergenic 20.0%
!! TTACCATTAAAAACTGTAAA+AGG - Chr3:4392649-4392668 None:intergenic 20.0%
!! TTAGTTATTGAGAAGTTATA+TGG - Chr3:4391379-4391398 None:intergenic 20.0%
!! TTATAAGTGATAATTGTAAG+AGG - Chr3:4389478-4389497 None:intergenic 20.0%
!! TTATTAACCAAAATTACATG+CGG - Chr3:4391525-4391544 None:intergenic 20.0%
!! TTGATTCAATTATGTTATGA+TGG - Chr3:4390321-4390340 None:intergenic 20.0%
!! TTGCTTGATGTTTAATATAT+TGG + Chr3:4387897-4387916 MsG0380011744.01.T01:intron 20.0%
!!! AACATTTTTGGTAATGATTT+TGG + Chr3:4386484-4386503 MsG0380011744.01.T01:intron 20.0%
!!! ACTTTAATTTCGTTATGATA+TGG - Chr3:4390506-4390525 None:intergenic 20.0%
!!! AGCCCTAATATTTTTAAATA+AGG + Chr3:4387602-4387621 MsG0380011744.01.T01:intron 20.0%
!!! AGTGTTTTTAGAAAATTAAC+GGG - Chr3:4387293-4387312 None:intergenic 20.0%
!!! ATGTTTTGTTAGAATGAAAA+TGG + Chr3:4386531-4386550 MsG0380011744.01.T01:intron 20.0%
!!! GCCCTAATATTTTTAAATAA+GGG + Chr3:4387603-4387622 MsG0380011744.01.T01:intron 20.0%
!!! TAAATATTTTAGGTTCTCTT+TGG + Chr3:4394119-4394138 MsG0380011744.01.T01:intron 20.0%
!!! TAACCCTTTAGAAATTATTT+CGG + Chr3:4391400-4391419 MsG0380011744.01.T01:intron 20.0%
!!! TAATATATTGGTTGATTTCT+CGG + Chr3:4387909-4387928 MsG0380011744.01.T01:intron 20.0%
!!! TACATCTGAAATACATAAAA+GGG + Chr3:4388272-4388291 MsG0380011744.01.T01:intron 20.0%
!!! TCTTGAGATTTTTTTTTAAG+TGG - Chr3:4391297-4391316 None:intergenic 20.0%
!!! TGTTTTAATTAGGACATTTA+TGG - Chr3:4386930-4386949 None:intergenic 20.0%
!!! TTCAATTTATATGTCTTTTG+TGG - Chr3:4389950-4389969 None:intergenic 20.0%
!!! TTCATTTTAAATTGCTAACA+TGG + Chr3:4387340-4387359 MsG0380011744.01.T01:intron 20.0%
!!! TTGATTTTGAATTTTTAGAC+GGG - Chr3:4390217-4390236 None:intergenic 20.0%
!!! TTTTTGCAACTATTTATAAC+AGG + Chr3:4387094-4387113 MsG0380011744.01.T01:CDS 20.0%
! AACAAAATAATCACCATATG+AGG - Chr3:4394598-4394617 None:intergenic 25.0%
! AAGACCGAAATAATTTCTAA+AGG - Chr3:4391407-4391426 None:intergenic 25.0%
! AATAATATAAGCAATCCTCT+AGG + Chr3:4389497-4389516 MsG0380011744.01.T01:intron 25.0%
! AATCACAGTATTGCATTATT+AGG - Chr3:4392488-4392507 None:intergenic 25.0%
! AATCTTTGTCTATGGTTAAT+TGG + Chr3:4393305-4393324 MsG0380011744.01.T01:intron 25.0%
! AATGATGAAAGTTACATGAA+AGG - Chr3:4389839-4389858 None:intergenic 25.0%
! AATGTAACTTACCATCATAA+TGG - Chr3:4387989-4388008 None:intergenic 25.0%
! ACAATCTCAAAAGTGATATT+TGG - Chr3:4394741-4394760 None:intergenic 25.0%
! ACAGATTGACCATAATATTA+AGG + Chr3:4393087-4393106 MsG0380011744.01.T01:intron 25.0%
! AGAAACTGAAAAAACTGAAA+AGG - Chr3:4386685-4386704 None:intergenic 25.0%
! AGACCGAAATAATTTCTAAA+GGG - Chr3:4391406-4391425 None:intergenic 25.0%
! AGTTATATGGTAACAAGTAA+TGG - Chr3:4391366-4391385 None:intergenic 25.0%
! ATGCTAATATAAATGTTGGA+GGG - Chr3:4389365-4389384 None:intergenic 25.0%
! ATTACCTTGAATTTGGATAT+GGG - Chr3:4390037-4390056 None:intergenic 25.0%
! ATTATTGATGTTTCAGATCT+CGG - Chr3:4392821-4392840 None:intergenic 25.0%
! ATTGAATGCTATTGTTAGAT+TGG - Chr3:4390678-4390697 None:intergenic 25.0%
! ATTGGTATAGAAACAATAAC+CGG - Chr3:4387963-4387982 None:intergenic 25.0%
! CAGGTAACAATTTGTAAATA+TGG - Chr3:4392130-4392149 None:intergenic 25.0%
! CATATGAATGATTCAATCAT+AGG - Chr3:4390128-4390147 None:intergenic 25.0%
! CGTAAACACGTAAATTTATA+AGG - Chr3:4393809-4393828 None:intergenic 25.0%
! CTGTCATTCAAACATATTTA+TGG + Chr3:4386273-4386292 MsG0380011744.01.T01:CDS 25.0%
! CTTATTTGCATTTACTTACA+TGG - Chr3:4394322-4394341 None:intergenic 25.0%
! GAAATACATAAAAGGGATTT+GGG + Chr3:4388279-4388298 MsG0380011744.01.T01:intron 25.0%
! GAAATTGATTACCTTGAATT+TGG - Chr3:4390044-4390063 None:intergenic 25.0%
! GAAATTGTAATATATAGAGG+TGG - Chr3:4390793-4390812 None:intergenic 25.0%
! GAAATTGTATAAACCCAAAA+TGG - Chr3:4388394-4388413 None:intergenic 25.0%
! GGGTTAAGTTTAGAAATATA+TGG - Chr3:4388373-4388392 None:intergenic 25.0%
! GTTATGAAAATCTTTGTCTA+TGG + Chr3:4393297-4393316 MsG0380011744.01.T01:intron 25.0%
! TAAATAATAACTTCTCGCAT+AGG + Chr3:4393768-4393787 MsG0380011744.01.T01:intron 25.0%
! TACAATTTCAAACCTAGAAA+AGG + Chr3:4390804-4390823 MsG0380011744.01.T01:intron 25.0%
! TACTATGTTAGTATTCATGT+TGG + Chr3:4388763-4388782 MsG0380011744.01.T01:intron 25.0%
! TATACCAGAATACGATATAT+TGG - Chr3:4388557-4388576 None:intergenic 25.0%
! TCAGTCTATTTATAATTTCG+CGG + Chr3:4391446-4391465 MsG0380011744.01.T01:intron 25.0%
! TGAAATACATAAAAGGGATT+TGG + Chr3:4388278-4388297 MsG0380011744.01.T01:intron 25.0%
! TTAAAAACTGTAAAAGGACA+AGG - Chr3:4392643-4392662 None:intergenic 25.0%
! TTAGTTACCTCAACATTAAT+AGG + Chr3:4389606-4389625 MsG0380011744.01.T01:intron 25.0%
! TTTAGTTGCATATAAATCCT+TGG - Chr3:4391867-4391886 None:intergenic 25.0%
! TTTGTTAGAATGAAAATGGT+TGG + Chr3:4386535-4386554 MsG0380011744.01.T01:intron 25.0%
!! AAATTCTGTCTATTTTCCAA+TGG + Chr3:4390548-4390567 MsG0380011744.01.T01:intron 25.0%
!! ACTATGAACAATTTGTTCAT+AGG + Chr3:4389092-4389111 MsG0380011744.01.T01:intron 25.0%
!! ATAAGTTGAGTGAGAAAATT+AGG - Chr3:4389728-4389747 None:intergenic 25.0%
!! ATTTTTAAATAAGGGAAGCT+CGG + Chr3:4387611-4387630 MsG0380011744.01.T01:intron 25.0%
!! CATAAGTTGAAATTATAAGC+TGG - Chr3:4390186-4390205 None:intergenic 25.0%
!! GATCTGAAACATCAATAATA+AGG + Chr3:4392822-4392841 MsG0380011744.01.T01:intron 25.0%
!! GTACATCTGAAATACATAAA+AGG + Chr3:4388271-4388290 MsG0380011744.01.T01:intron 25.0%
!! TGATATTGATGATAGCTTAA+GGG - Chr3:4390767-4390786 None:intergenic 25.0%
!! TGATTCAATCATAGGTTTTA+TGG - Chr3:4390120-4390139 None:intergenic 25.0%
!! TGTCCTTTTACAGTTTTTAA+TGG + Chr3:4392643-4392662 MsG0380011744.01.T01:intron 25.0%
!! TTCTAAACTTAACCCATTTT+GGG + Chr3:4388378-4388397 MsG0380011744.01.T01:intron 25.0%
!! TTGATATTGATGATAGCTTA+AGG - Chr3:4390768-4390787 None:intergenic 25.0%
!! TTTCCAAAACTTGATTGTTT+TGG - Chr3:4387235-4387254 None:intergenic 25.0%
!! TTTCTAAACTTAACCCATTT+TGG + Chr3:4388377-4388396 MsG0380011744.01.T01:intron 25.0%
!! TTTCTGAAAACAACTAGTTT+CGG + Chr3:4388619-4388638 MsG0380011744.01.T01:intron 25.0%
!!! AAACAATCAAGTTTTGGAAA+AGG + Chr3:4387235-4387254 MsG0380011744.01.T01:intron 25.0%
!!! AAACTAGTTGTTTTCAGAAA+AGG - Chr3:4388619-4388638 None:intergenic 25.0%
!!! AAATTTTAGTTATGGAACTC+CGG - Chr3:4388654-4388673 None:intergenic 25.0%
!!! CTGAAGTTTAAGTTTTTCAT+CGG - Chr3:4386634-4386653 None:intergenic 25.0%
!!! CTTGCATATTGATTTCTAAA+AGG + Chr3:4391141-4391160 MsG0380011744.01.T01:intron 25.0%
!!! GATGGAGAATTTTAAAGAAT+TGG - Chr3:4390878-4390897 None:intergenic 25.0%
!!! GGTTGAGTTTTATGAATAAT+TGG - Chr3:4390651-4390670 None:intergenic 25.0%
!!! GTTGTTTTCATAAGTTATTC+TGG + Chr3:4394261-4394280 MsG0380011744.01.T01:intron 25.0%
!!! TACAAATCTGTAGTTTTATC+AGG + Chr3:4393505-4393524 MsG0380011744.01.T01:CDS 25.0%
!!! TGCATGTTTTTATTGCAAAT+TGG + Chr3:4392168-4392187 MsG0380011744.01.T01:intron 25.0%
!!! TGGTGTTATAATCATTAAAC+AGG - Chr3:4391813-4391832 None:intergenic 25.0%
!!! TTATATTTTAATTAGGAGGG+AGG - Chr3:4386961-4386980 None:intergenic 25.0%
!!! TTTTTGGTAATGATTTTGGT+TGG + Chr3:4386488-4386507 MsG0380011744.01.T01:intron 25.0%
AAAAATCGTTGCAAGCTTAT+AGG - Chr3:4393899-4393918 None:intergenic 30.0%
AAAACACTTCTGCAGATAAT+AGG + Chr3:4386654-4386673 MsG0380011744.01.T01:intron 30.0%
AAAGTTACATGAAAGGATGA+TGG - Chr3:4389832-4389851 None:intergenic 30.0%
AAATATGTTTGAATGACAGC+TGG - Chr3:4386272-4386291 None:intergenic 30.0%
AAATTTCGTCTGCTTTCAAA+TGG + Chr3:4390366-4390385 MsG0380011744.01.T01:intron 30.0%
AACCGTTCAAAGAATATACA+CGG - Chr3:4392523-4392542 None:intergenic 30.0%
AATATGTTTGAATGACAGCT+GGG - Chr3:4386271-4386290 None:intergenic 30.0%
AATGAGAGTAAGGTAAAATG+AGG - Chr3:4386601-4386620 None:intergenic 30.0%
AATGGTATGACATGTATGTT+TGG - Chr3:4390923-4390942 None:intergenic 30.0%
AGAAATGTTCATGCTTAACA+TGG + Chr3:4387823-4387842 MsG0380011744.01.T01:intron 30.0%
AGACAGAATTTAACATGAAG+TGG - Chr3:4390539-4390558 None:intergenic 30.0%
AGATCTATGTAGACATGTAT+AGG + Chr3:4387192-4387211 MsG0380011744.01.T01:intron 30.0%
AGGACATTTATGGTTATATG+AGG - Chr3:4386920-4386939 None:intergenic 30.0%
ATACCAATATGCCATTATGA+TGG + Chr3:4387975-4387994 MsG0380011744.01.T01:CDS 30.0%
ATACTTTGACATGCTTATCT+GGG + Chr3:4388581-4388600 MsG0380011744.01.T01:intron 30.0%
ATCTCCAATATATCGTATTC+TGG + Chr3:4388550-4388569 MsG0380011744.01.T01:intron 30.0%
ATTGACCATAATATTAAGGC+AGG + Chr3:4393091-4393110 MsG0380011744.01.T01:intron 30.0%
ATTGTAAAAGAAAACGGTGA+AGG + Chr3:4387506-4387525 MsG0380011744.01.T01:intron 30.0%
ATTTAACACGAAATAGGCTT+TGG - Chr3:4390350-4390369 None:intergenic 30.0%
ATTTCTCAATTTCCATCGTT+TGG + Chr3:4388670-4388689 MsG0380011744.01.T01:intron 30.0%
CAACCAGGTAATATATCTTA+AGG + Chr3:4391694-4391713 MsG0380011744.01.T01:intron 30.0%
CAAGAGAAAAGAAAACAGTA+GGG - Chr3:4392355-4392374 None:intergenic 30.0%
CAGAATAATTTACACTATCG+AGG - Chr3:4394634-4394653 None:intergenic 30.0%
CAGTCTATTTATAATTTCGC+GGG + Chr3:4391447-4391466 MsG0380011744.01.T01:intron 30.0%
CTTAAAATGTACAGTTGTTG+TGG - Chr3:4390727-4390746 None:intergenic 30.0%
GAAAGTTACAGGATTTCTTA+AGG + Chr3:4392714-4392733 MsG0380011744.01.T01:CDS 30.0%
GAAATTCAATTATGGAACCA+AGG - Chr3:4388807-4388826 None:intergenic 30.0%
GACAGAATTTAACATGAAGT+GGG - Chr3:4390538-4390557 None:intergenic 30.0%
GACGAAATTTAACACGAAAT+AGG - Chr3:4390356-4390375 None:intergenic 30.0%
GATCATTTATGTTCACAAGT+CGG - Chr3:4389560-4389579 None:intergenic 30.0%
GATGCTAATATAAATGTTGG+AGG - Chr3:4389366-4389385 None:intergenic 30.0%
GATTACCTTGAATTTGGATA+TGG - Chr3:4390038-4390057 None:intergenic 30.0%
TAAGCTTATGTTTCACTTCT+TGG + Chr3:4393395-4393414 MsG0380011744.01.T01:intron 30.0%
TAATGGTAAAGTAATGCGTA+AGG + Chr3:4392660-4392679 MsG0380011744.01.T01:CDS 30.0%
TACCTCAACATTAATAGGTA+AGG + Chr3:4389611-4389630 MsG0380011744.01.T01:intron 30.0%
TAGTTCATCCACAATTTACA+AGG - Chr3:4390836-4390855 None:intergenic 30.0%
TATACTTTGACATGCTTATC+TGG + Chr3:4388580-4388599 MsG0380011744.01.T01:intron 30.0%
TATATGGTAACAAGTAATGG+AGG - Chr3:4391363-4391382 None:intergenic 30.0%
TATGTTTCACTTCTTGGTAT+AGG + Chr3:4393401-4393420 MsG0380011744.01.T01:intron 30.0%
TCAAGAAACACGTATAGAAA+AGG + Chr3:4393710-4393729 MsG0380011744.01.T01:intron 30.0%
TCATATAACATACATGTCAG+TGG - Chr3:4388200-4388219 None:intergenic 30.0%
TGTACAAGTCATTATACGAT+AGG - Chr3:4388256-4388275 None:intergenic 30.0%
TGTCAGATTAGTAAATGCTT+AGG + Chr3:4393275-4393294 MsG0380011744.01.T01:intron 30.0%
TGTTTACACTTTCAAAAGAG+AGG + Chr3:4392988-4393007 MsG0380011744.01.T01:CDS 30.0%
TTACAAATTGTTACCTGAAG+AGG + Chr3:4392133-4392152 MsG0380011744.01.T01:intron 30.0%
TTACCATCATAATGGCATAT+TGG - Chr3:4387981-4388000 None:intergenic 30.0%
TTATTTGTTTCCACCTTTGT+TGG + Chr3:4392599-4392618 MsG0380011744.01.T01:intron 30.0%
TTCATGCTTAACATGGAAAA+GGG + Chr3:4387830-4387849 MsG0380011744.01.T01:intron 30.0%
TTGGAACTAACTCTAAACAA+TGG + Chr3:4386507-4386526 MsG0380011744.01.T01:intron 30.0%
TTGTACAGAAAGATTAGAGA+AGG + Chr3:4393968-4393987 MsG0380011744.01.T01:intron 30.0%
TTTGTCTATGGTTAATTGGA+CGG + Chr3:4393309-4393328 MsG0380011744.01.T01:intron 30.0%
! AGGTCAAATTGATGACAATT+TGG + Chr3:4391941-4391960 MsG0380011744.01.T01:intron 30.0%
! ATATGGTAACAAGTAATGGA+GGG - Chr3:4391362-4391381 None:intergenic 30.0%
! CACAACAACTGTACATTTTA+AGG + Chr3:4390725-4390744 MsG0380011744.01.T01:intron 30.0%
! GATATTGATGATAGCTTAAG+GGG - Chr3:4390766-4390785 None:intergenic 30.0%
! GTGTGCATTTTCAAAAACAA+TGG + Chr3:4387426-4387445 MsG0380011744.01.T01:intron 30.0%
! GTTTTGTATTTCTTGCAATG+CGG + Chr3:4393059-4393078 MsG0380011744.01.T01:intron 30.0%
! TATAAGCTTGCAACGATTTT+TGG + Chr3:4393898-4393917 MsG0380011744.01.T01:intron 30.0%
! TCACCAAAACAATCAAGTTT+TGG + Chr3:4387229-4387248 MsG0380011744.01.T01:intron 30.0%
! TCTGGAATAGCTGTTAATAT+AGG + Chr3:4392296-4392315 MsG0380011744.01.T01:CDS 30.0%
! TGCTATTGTTAGATTGGTTA+CGG - Chr3:4390672-4390691 None:intergenic 30.0%
! TGTCATTTCTTAAACACTCA+CGG + Chr3:4387123-4387142 MsG0380011744.01.T01:intron 30.0%
! TTTTGATATCTTGACCTAAC+TGG + Chr3:4393131-4393150 MsG0380011744.01.T01:intron 30.0%
!! AGTTAAATGAGAGCTTTGAA+AGG + Chr3:4393833-4393852 MsG0380011744.01.T01:intron 30.0%
!! ATCCTAGGTAATTTTCTAGT+AGG - Chr3:4388071-4388090 None:intergenic 30.0%
!! GGCTTGGAAATTTGTTAAAT+TGG - Chr3:4391019-4391038 None:intergenic 30.0%
!! GTTGTTGTGGTATTTTGAAT+TGG - Chr3:4390714-4390733 None:intergenic 30.0%
!! TCCTAGGTAATTTTCTAGTA+GGG - Chr3:4388070-4388089 None:intergenic 30.0%
!!! AAATCTGTAGTTTTATCAGG+AGG + Chr3:4393508-4393527 MsG0380011744.01.T01:CDS 30.0%
!!! ACAATAACCGGTTGATTTTT+TGG - Chr3:4387951-4387970 None:intergenic 30.0%
!!! CCTTTTTGTTTTGTCGTATT+CGG - Chr3:4392075-4392094 None:intergenic 30.0%
!!! CTTTTATCTGTTTTTGCTCA+AGG + Chr3:4386401-4386420 MsG0380011744.01.T01:intron 30.0%
!!! GTAGTTTTGTTATGTGTTTG+TGG - Chr3:4390997-4391016 None:intergenic 30.0%
AAGAGAACAAGAGAAAGGAT+GGG + Chr3:4391039-4391058 MsG0380011744.01.T01:intron 35.0%
AAGTTATGAGACAAGGGAAA+GGG - Chr3:4386869-4386888 None:intergenic 35.0%
AATAGGGAAGTTATGAGACA+AGG - Chr3:4386876-4386895 None:intergenic 35.0%
AATTAGGATTCATCCTAGCT+AGG - Chr3:4389712-4389731 None:intergenic 35.0%
AATTCGTATAAACCTGCTGT+CGG - Chr3:4390624-4390643 None:intergenic 35.0%
AATTGTCACCATGTGCTAAA+AGG - Chr3:4387752-4387771 None:intergenic 35.0%
ACCCCAAAAGTAGTAGAATT+AGG - Chr3:4393941-4393960 None:intergenic 35.0%
AGAAATTGAAGTGGGTATAG+AGG - Chr3:4390946-4390965 None:intergenic 35.0%
AGCATTTACTAATCTGACAG+AGG - Chr3:4393274-4393293 None:intergenic 35.0%
AGGTAAGTAAAGTCAGACTA+AGG - Chr3:4392011-4392030 None:intergenic 35.0%
AGGTATGACTCTAATTCCAT+TGG - Chr3:4394024-4394043 None:intergenic 35.0%
AGTAACAGAACACAAGATAG+TGG - Chr3:4386359-4386378 None:intergenic 35.0%
ATAATGTAGCCTATGACGTA+TGG - Chr3:4389171-4389190 None:intergenic 35.0%
ATAGCCAGTAGTCAGTAAAT+AGG - Chr3:4391751-4391770 None:intergenic 35.0%
ATAGGGAAGTTATGAGACAA+GGG - Chr3:4386875-4386894 None:intergenic 35.0%
ATATGTTTGAATGACAGCTG+GGG - Chr3:4386270-4386289 None:intergenic 35.0%
ATCCAAAAAGACTCGTGAAA+TGG - Chr3:4393683-4393702 None:intergenic 35.0%
ATCTTGTGTTCTGTTACTGA+TGG + Chr3:4386361-4386380 MsG0380011744.01.T01:intron 35.0%
ATGGTTAATTGGACGGTATA+AGG + Chr3:4393316-4393335 MsG0380011744.01.T01:intron 35.0%
CAAATTCCTGCACATCAAAA+AGG - Chr3:4387035-4387054 None:intergenic 35.0%
CAACTCTTGAACATTTGGAA+GGG - Chr3:4386810-4386829 None:intergenic 35.0%
CACCGTGTATATTCTTTGAA+CGG + Chr3:4392518-4392537 MsG0380011744.01.T01:intron 35.0%
CACCTTACCTATTAATGTTG+AGG - Chr3:4389616-4389635 None:intergenic 35.0%
CATTTGTGATAGAGAGAAGA+TGG + Chr3:4387386-4387405 MsG0380011744.01.T01:intron 35.0%
CCAAGACTCTCAAATTTCTT+GGG - Chr3:4386781-4386800 None:intergenic 35.0%
CCACCTTAAGATATATTACC+TGG - Chr3:4391700-4391719 None:intergenic 35.0%
CCAGGTAATATATCTTAAGG+TGG + Chr3:4391697-4391716 MsG0380011744.01.T01:intron 35.0%
CCGAATACGACAAAACAAAA+AGG + Chr3:4392072-4392091 MsG0380011744.01.T01:intron 35.0%
CGGTTAATTGGTAAAGGATT+GGG - Chr3:4386840-4386859 None:intergenic 35.0%
CTAATTCCATTGGACATGTA+TGG - Chr3:4394014-4394033 None:intergenic 35.0%
CTCAATATGTTGTCTAAGTG+TGG + Chr3:4392445-4392464 MsG0380011744.01.T01:intron 35.0%
CTTCCAAATGTTCAAGAGTT+GGG + Chr3:4386809-4386828 MsG0380011744.01.T01:intron 35.0%
GAAAACGGTGAAGGAAATAT+TGG + Chr3:4387515-4387534 MsG0380011744.01.T01:intron 35.0%
GCAAATAAGTCAACCAAAAC+AGG + Chr3:4394333-4394352 MsG0380011744.01.T01:intron 35.0%
GCAAGAGAAAAGAAAACAGT+AGG - Chr3:4392356-4392375 None:intergenic 35.0%
GCTACGAAGTAATAGTTCAT+GGG - Chr3:4388704-4388723 None:intergenic 35.0%
GGAACCAAGGAAAAATTCTA+AGG - Chr3:4388794-4388813 None:intergenic 35.0%
GGGAAGGTTTAGATTCATTA+CGG + Chr3:4387664-4387683 MsG0380011744.01.T01:intron 35.0%
GGTGAAACCAAAAAATCAAC+CGG + Chr3:4387941-4387960 MsG0380011744.01.T01:CDS 35.0%
GTTCATGCTTAACATGGAAA+AGG + Chr3:4387829-4387848 MsG0380011744.01.T01:intron 35.0%
GTTTACCTTCCATTTGTAAG+AGG + Chr3:4387701-4387720 MsG0380011744.01.T01:intron 35.0%
TAATGTAGCCTATGACGTAT+GGG - Chr3:4389170-4389189 None:intergenic 35.0%
TACATTTACACCACCAACAA+AGG - Chr3:4392615-4392634 None:intergenic 35.0%
TAGAAATATATGGCGATCCT+AGG - Chr3:4388363-4388382 None:intergenic 35.0%
TAGTATCAGATGAAGAGTCT+TGG - Chr3:4387787-4387806 None:intergenic 35.0%
TATCTCTTCGTTGTAGCAAA+CGG + Chr3:4389188-4389207 MsG0380011744.01.T01:intron 35.0%
TCCAAGACTCTCAAATTTCT+TGG - Chr3:4386782-4386801 None:intergenic 35.0%
TCGAAGTCAAAATGAGAGTA+AGG - Chr3:4386611-4386630 None:intergenic 35.0%
TCGGTTAATTGGTAAAGGAT+TGG - Chr3:4386841-4386860 None:intergenic 35.0%
TCTAGCATGAGTGTTAAACT+TGG + Chr3:4388092-4388111 MsG0380011744.01.T01:intron 35.0%
TCTTGGCAAGAAATTGAAGT+GGG - Chr3:4390954-4390973 None:intergenic 35.0%
TGAAATCAGCCTCTTACAAA+TGG - Chr3:4387713-4387732 None:intergenic 35.0%
TGCAACTTTGTGATAGAAAC+TGG + Chr3:4386717-4386736 MsG0380011744.01.T01:intron 35.0%
TGGAAGGATAGAGAAAAATG+TGG + Chr3:4391265-4391284 MsG0380011744.01.T01:intron 35.0%
TGGCATAGAGGGAATAATAA+GGG + Chr3:4391067-4391086 MsG0380011744.01.T01:intron 35.0%
TGGTGGTTTATTGAGAATGA+GGG + Chr3:4391179-4391198 MsG0380011744.01.T01:intron 35.0%
TTCTTGGCAAGAAATTGAAG+TGG - Chr3:4390955-4390974 None:intergenic 35.0%
TTGAGTGAGAATTGTACCAT+TGG - Chr3:4390567-4390586 None:intergenic 35.0%
TTGGAGCTTATGTTCATCAA+TGG - Chr3:4390859-4390878 None:intergenic 35.0%
! AAGGATGATGGTTGATCTAA+AGG - Chr3:4389820-4389839 None:intergenic 35.0%
! ACTATAGCACTGAAAACTCT+TGG + Chr3:4393633-4393652 MsG0380011744.01.T01:intron 35.0%
! CTGATTCAGTATCTGGAATT+AGG - Chr3:4391595-4391614 None:intergenic 35.0%
! CTTTTTGATGTGCAGGAATT+TGG + Chr3:4387033-4387052 MsG0380011744.01.T01:intron 35.0%
! GTTACCTATTTACTGACTAC+TGG + Chr3:4391744-4391763 MsG0380011744.01.T01:intron 35.0%
! TCATCTTCCGCATGTAATTT+TGG + Chr3:4391515-4391534 MsG0380011744.01.T01:intron 35.0%
! TGGCCTAATTCTACTACTTT+TGG + Chr3:4393935-4393954 MsG0380011744.01.T01:intron 35.0%
! TTCCATTTCACGAGTCTTTT+TGG + Chr3:4393678-4393697 MsG0380011744.01.T01:intron 35.0%
! TTGGTGGTTTATTGAGAATG+AGG + Chr3:4391178-4391197 MsG0380011744.01.T01:intron 35.0%
! TTGTTGCTTATATGATTCCC+TGG + Chr3:4391554-4391573 MsG0380011744.01.T01:intron 35.0%
! TTTTGGCAAGTGAAGAAACT+TGG + Chr3:4393915-4393934 MsG0380011744.01.T01:intron 35.0%
!! CCTAGGTAATTTTCTAGTAG+GGG - Chr3:4388069-4388088 None:intergenic 35.0%
!! CGGTTCTGAGTATTGAAATA+AGG - Chr3:4386997-4387016 None:intergenic 35.0%
!! GCCTAATTCTACTACTTTTG+GGG + Chr3:4393937-4393956 MsG0380011744.01.T01:intron 35.0%
!! GGCCTAATTCTACTACTTTT+GGG + Chr3:4393936-4393955 MsG0380011744.01.T01:intron 35.0%
!! GGTATTATTTCTGAGGTAAC+AGG - Chr3:4388179-4388198 None:intergenic 35.0%
!! GTTATGTGTTTGTGGTTTTG+AGG - Chr3:4390989-4391008 None:intergenic 35.0%
!! TCTCACTAGAGTTTCTAGTA+AGG + Chr3:4394482-4394501 MsG0380011744.01.T01:intron 35.0%
!! TGTCAGTGGTATTATTTCTG+AGG - Chr3:4388186-4388205 None:intergenic 35.0%
!!! TTATCTGTTTTTGCTCAAGG+CGG + Chr3:4386404-4386423 MsG0380011744.01.T01:intron 35.0%
AAACATTTACCTGCCAAACC+TGG - Chr3:4393547-4393566 None:intergenic 40.0%
AAACTGTAAAAGGACAAGGC+AGG - Chr3:4392639-4392658 None:intergenic 40.0%
AAAGTCTGCACTATTGATGC+TGG - Chr3:4390445-4390464 None:intergenic 40.0%
AACGTGTAAGAAGGGGTAAA+CGG - Chr3:4389668-4389687 None:intergenic 40.0%
AAGCCAAGAGAACAAGAGAA+AGG + Chr3:4391034-4391053 MsG0380011744.01.T01:intron 40.0%
AATTGCCAAAATACCCTCCA+AGG + Chr3:4391321-4391340 MsG0380011744.01.T01:intron 40.0%
ACAATCACATTCACCTCTTC+AGG - Chr3:4392149-4392168 None:intergenic 40.0%
ACACACGAAGACAATGCATT+TGG + Chr3:4390010-4390029 MsG0380011744.01.T01:intron 40.0%
ACACTCATGCTAGATATCCT+AGG - Chr3:4388086-4388105 None:intergenic 40.0%
ACCACAACGAAGAGATAATG+TGG - Chr3:4389015-4389034 None:intergenic 40.0%
ACCACATTATCTCTTCGTTG+TGG + Chr3:4388869-4388888 MsG0380011744.01.T01:intron 40.0%
ACTGTCGTAAGTACGTGTAA+AGG - Chr3:4390597-4390616 None:intergenic 40.0%
AGACCCAACTCTTGAACATT+TGG - Chr3:4386815-4386834 None:intergenic 40.0%
AGATTAGAGAAGGAACTCCA+TGG + Chr3:4393978-4393997 MsG0380011744.01.T01:CDS 40.0%
AGCAAATATGCTTGTCCATC+GGG + Chr3:4386452-4386471 MsG0380011744.01.T01:CDS 40.0%
AGGAACATTCAAGTCGAACA+GGG - Chr3:4391660-4391679 None:intergenic 40.0%
AGGCAACAATTTGTAAAGCC+AGG - Chr3:4391575-4391594 None:intergenic 40.0%
AGTTATGAGACAAGGGAAAG+GGG - Chr3:4386868-4386887 None:intergenic 40.0%
ATCAGCCTCTTACAAATGGA+AGG - Chr3:4387709-4387728 None:intergenic 40.0%
ATCCGCCTGCCTTAATATTA+TGG - Chr3:4393099-4393118 None:intergenic 40.0%
ATCCTCTAGGTTATCAAACG+TGG + Chr3:4389510-4389529 MsG0380011744.01.T01:intron 40.0%
ATGAGTGTTAAACTTGGCGT+CGG + Chr3:4388098-4388117 MsG0380011744.01.T01:intron 40.0%
ATTCCATTGGACATGTATGG+AGG - Chr3:4394011-4394030 None:intergenic 40.0%
ATTCCTGCACATCAAAAAGG+AGG - Chr3:4387032-4387051 None:intergenic 40.0%
ATTCTCCATACAACGAGCTA+TGG - Chr3:4393449-4393468 None:intergenic 40.0%
ATTGATGTTTCAGATCTCGG+AGG - Chr3:4392818-4392837 None:intergenic 40.0%
ATTGCCAAAATACCCTCCAA+GGG + Chr3:4391322-4391341 MsG0380011744.01.T01:intron 40.0%
ATTTACACCACCAACAAAGG+TGG - Chr3:4392612-4392631 None:intergenic 40.0%
CAAGAGAACAAGAGAAAGGA+TGG + Chr3:4391038-4391057 MsG0380011744.01.T01:intron 40.0%
CAAGCATCATTTCAAGCTAC+AGG + Chr3:4392957-4392976 MsG0380011744.01.T01:CDS 40.0%
CATCCTTTCTCTTGTTCTCT+TGG - Chr3:4391040-4391059 None:intergenic 40.0%
CCAACCAAATTTGCAATAGC+CGG - Chr3:4386432-4386451 None:intergenic 40.0%
CCAACTCTTGAACATTTGGA+AGG - Chr3:4386811-4386830 None:intergenic 40.0%
CCATCAATGATAATAGCACC+AGG - Chr3:4386315-4386334 None:intergenic 40.0%
CCCAAGAAATTTGAGAGTCT+TGG + Chr3:4386778-4386797 MsG0380011744.01.T01:intron 40.0%
CCCCTACTAGAAAATTACCT+AGG + Chr3:4388066-4388085 MsG0380011744.01.T01:intron 40.0%
CCTTCCAAATGTTCAAGAGT+TGG + Chr3:4386808-4386827 MsG0380011744.01.T01:intron 40.0%
GAAGTTATGAGACAAGGGAA+AGG - Chr3:4386870-4386889 None:intergenic 40.0%
GACCATAATATTAAGGCAGG+CGG + Chr3:4393094-4393113 MsG0380011744.01.T01:intron 40.0%
GAGAAGATGGAAGACAAGTT+AGG + Chr3:4387399-4387418 MsG0380011744.01.T01:intron 40.0%
GAGCAAATATGCTTGTCCAT+CGG + Chr3:4386451-4386470 MsG0380011744.01.T01:CDS 40.0%
GCAAGGACAAGAAGAATTGA+TGG - Chr3:4390896-4390915 None:intergenic 40.0%
GGAACTCACCTTGTAAATTG+TGG + Chr3:4390825-4390844 MsG0380011744.01.T01:intron 40.0%
GGCAACAATTTGTAAAGCCA+GGG - Chr3:4391574-4391593 None:intergenic 40.0%
GGCATAGAGGGAATAATAAG+GGG + Chr3:4391068-4391087 MsG0380011744.01.T01:intron 40.0%
GGCTACGAAGTAATAGTTCA+TGG - Chr3:4388705-4388724 None:intergenic 40.0%
GGTAAAGTAATGCGTAAGGT+CGG + Chr3:4392664-4392683 MsG0380011744.01.T01:CDS 40.0%
GTCTGACTTTACTTACCTAC+CGG + Chr3:4392013-4392032 MsG0380011744.01.T01:intron 40.0%
GTGGCATAGAGGGAATAATA+AGG + Chr3:4391066-4391085 MsG0380011744.01.T01:intron 40.0%
GTGTGGTACAACGTTGATAT+TGG + Chr3:4392462-4392481 MsG0380011744.01.T01:intron 40.0%
GTGTTTCATGTTCATCACCA+TGG - Chr3:4388047-4388066 None:intergenic 40.0%
TACTATGACCCATACGTCAT+AGG + Chr3:4389159-4389178 MsG0380011744.01.T01:intron 40.0%
TATCCTGCAGCAAAGTAGAT+CGG - Chr3:4394361-4394380 None:intergenic 40.0%
TATCTCTTCGTTGCAGCAAA+CGG + Chr3:4389121-4389140 MsG0380011744.01.T01:intron 40.0%
TATCTCTTCGTTGTGGTGAA+CGG + Chr3:4389018-4389037 MsG0380011744.01.T01:intron 40.0%
TATGCTGCAAAACGAACTTC+TGG + Chr3:4392278-4392297 MsG0380011744.01.T01:CDS 40.0%
TATTTATGGTCAGAGAGCTC+AGG + Chr3:4386287-4386306 MsG0380011744.01.T01:CDS 40.0%
TCATTTCAAGCTACAGGAGA+TGG + Chr3:4392963-4392982 MsG0380011744.01.T01:CDS 40.0%
TCCTCTAGGTTATCAAACGT+GGG + Chr3:4389511-4389530 MsG0380011744.01.T01:intron 40.0%
TGCAATCAGTCTATCCAGTT+AGG - Chr3:4393148-4393167 None:intergenic 40.0%
TGCATATAAATCCTTGGCAG+AGG - Chr3:4391861-4391880 None:intergenic 40.0%
TGGTCCCATATCCAAATTCA+AGG + Chr3:4390030-4390049 MsG0380011744.01.T01:intron 40.0%
TGGTGAAAATTGACTGTGTC+TGG + Chr3:4386555-4386574 MsG0380011744.01.T01:intron 40.0%
TGTCGAAGCCTAGTATACAT+TGG - Chr3:4387072-4387091 None:intergenic 40.0%
TTATTCAAGCCACATCTTGC+TGG + Chr3:4393029-4393048 MsG0380011744.01.T01:CDS 40.0%
TTCTATCACAAAGTTGCAGC+AGG - Chr3:4386715-4386734 None:intergenic 40.0%
TTCTTGTTCCTCAACACACT+AGG - Chr3:4391115-4391134 None:intergenic 40.0%
TTGAAGTGGGTATAGAGGAA+TGG - Chr3:4390941-4390960 None:intergenic 40.0%
TTGAGTCGCCAATGTATACT+AGG + Chr3:4387061-4387080 MsG0380011744.01.T01:CDS 40.0%
TTGCATCTATCCTAGGTTGT+TGG + Chr3:4388324-4388343 MsG0380011744.01.T01:intron 40.0%
TTTAGGGAGGCTGGAATAAT+AGG + Chr3:4394665-4394684 MsG0380011744.01.T01:three_prime_UTR 40.0%
TTTCTCTTGTTCTCTTGGCT+TGG - Chr3:4391035-4391054 None:intergenic 40.0%
TTTGTTTCCACCTTTGTTGG+TGG + Chr3:4392602-4392621 MsG0380011744.01.T01:intron 40.0%
! AAAGGAGGCAAAGTGTTAGA+CGG - Chr3:4387017-4387036 None:intergenic 40.0%
! AAATGTGTCTTTTCCCTTGG+AGG - Chr3:4391338-4391357 None:intergenic 40.0%
! AAGTAGATCGGTACCTGTTT+TGG - Chr3:4394349-4394368 None:intergenic 40.0%
! AATGTGTCTTTTCCCTTGGA+GGG - Chr3:4391337-4391356 None:intergenic 40.0%
! ACAAGGTGAGTTCCTTTTCT+AGG - Chr3:4390819-4390838 None:intergenic 40.0%
! ATATTGGTTGATTTCTCGGC+AGG + Chr3:4387913-4387932 MsG0380011744.01.T01:intron 40.0%
! CTGATAATCTAGAGTTTGGC+CGG - Chr3:4392035-4392054 None:intergenic 40.0%
! GCGTCCTTAGAATTTTTCCT+TGG + Chr3:4388787-4388806 MsG0380011744.01.T01:intron 40.0%
! GGGATTCGGTTAATTGGTAA+AGG - Chr3:4386846-4386865 None:intergenic 40.0%
! GGTAAATGTGTCTTTTCCCT+TGG - Chr3:4391341-4391360 None:intergenic 40.0%
! TGGGTCTTTTTACCAAACGA+TGG - Chr3:4388685-4388704 None:intergenic 40.0%
! TTGATGGGTCTAGAGATGAT+TGG + Chr3:4386184-4386203 MsG0380011744.01.T01:CDS 40.0%
! TTGTATGGTGATTTGTGCCA+TGG + Chr3:4388027-4388046 MsG0380011744.01.T01:intron 40.0%
!! ACACGAAATAGGCTTTGGAA+TGG - Chr3:4390345-4390364 None:intergenic 40.0%
!! CCTGGTGCTATTATCATTGA+TGG + Chr3:4386312-4386331 MsG0380011744.01.T01:CDS 40.0%
!! GTTCACAAGTCGGTTAGTTT+AGG - Chr3:4389550-4389569 None:intergenic 40.0%
!! TACGTACGTCATTTTGCAGT+GGG - Chr3:4390399-4390418 None:intergenic 40.0%
!! TCGGTTAGTTTAGGTTATCG+AGG - Chr3:4389541-4389560 None:intergenic 40.0%
!! TTGCACTGAGAGAGTTGATA+CGG - Chr3:4387160-4387179 None:intergenic 40.0%
!!! GGAGGGTATTTTGGCAATTT+GGG - Chr3:4391320-4391339 None:intergenic 40.0%
!!! TCAAGTTTTGGAAAAGGCAG+TGG + Chr3:4387241-4387260 MsG0380011744.01.T01:intron 40.0%
!!! TGGAGGGTATTTTGGCAATT+TGG - Chr3:4391321-4391340 None:intergenic 40.0%
!!! TTTTCCCTTGGAGGGTATTT+TGG - Chr3:4391329-4391348 None:intergenic 40.0%
AAAACAGTAGGGCGCATACT+TGG - Chr3:4392344-4392363 None:intergenic 45.0%
AACTGCATGTTTGCCAGGTT+TGG + Chr3:4393531-4393550 MsG0380011744.01.T01:CDS 45.0%
AAGAACCCATGCAACACACA+GGG - Chr3:4392550-4392569 None:intergenic 45.0%
AAGAGTCTTGGCACAACTGT+TGG - Chr3:4387775-4387794 None:intergenic 45.0%
AAGGATCTGCAATTCACGGA+CGG - Chr3:4386237-4386256 None:intergenic 45.0%
AAGTTGTTGTCTCGATGCTC+TGG - Chr3:4391618-4391637 None:intergenic 45.0%
ACACACTTCCTCTCACTTTG+TGG - Chr3:4391246-4391265 None:intergenic 45.0%
ACCATGTGCTAAAAGGTCTC+TGG - Chr3:4387745-4387764 None:intergenic 45.0%
ACGTGTAAGAAGGGGTAAAC+GGG - Chr3:4389667-4389686 None:intergenic 45.0%
ACTTACACTCCAGCAAGATG+TGG - Chr3:4393041-4393060 None:intergenic 45.0%
AGAGTCATACCTCCTCCATA+CGG + Chr3:4394032-4394051 MsG0380011744.01.T01:CDS 45.0%
AGCATTTATGACCTCTGCCA+AGG + Chr3:4391847-4391866 MsG0380011744.01.T01:intron 45.0%
ATGCACAACTGAGCGATCAA+GGG + Chr3:4388417-4388436 MsG0380011744.01.T01:intron 45.0%
ATGGAGAATTGCCATTCTGC+AGG + Chr3:4393460-4393479 MsG0380011744.01.T01:CDS 45.0%
ATTATCAGGCCCCTTTCTCT+GGG + Chr3:4392047-4392066 MsG0380011744.01.T01:intron 45.0%
ATTCTGCACCCTCCAACTTT+AGG + Chr3:4394648-4394667 MsG0380011744.01.T01:three_prime_UTR 45.0%
CAGGAACATTCAAGTCGAAC+AGG - Chr3:4391661-4391680 None:intergenic 45.0%
CAGTGAGTTGCATCTATCCT+AGG + Chr3:4388317-4388336 MsG0380011744.01.T01:intron 45.0%
CATTGTCTTCGTGTGTGTGT+TGG - Chr3:4390006-4390025 None:intergenic 45.0%
CCGGCTATTGCAAATTTGGT+TGG + Chr3:4386429-4386448 MsG0380011744.01.T01:CDS 45.0%
CCTTATCTCTTCCTTCCTCT+CGG - Chr3:4391211-4391230 None:intergenic 45.0%
CGAGAGGAAGGAAGAGATAA+GGG + Chr3:4391209-4391228 MsG0380011744.01.T01:intron 45.0%
CGGCCAAACTCTAGATTATC+AGG + Chr3:4392033-4392052 MsG0380011744.01.T01:intron 45.0%
CTTCCTCCATACATGTCCAA+TGG + Chr3:4394005-4394024 MsG0380011744.01.T01:CDS 45.0%
GATGAAGAAGCAGACATAGC+TGG - Chr3:4388224-4388243 None:intergenic 45.0%
GATTACCAGGTGACAACGAT+TGG + Chr3:4393482-4393501 MsG0380011744.01.T01:CDS 45.0%
GCAAATATGCTTGTCCATCG+GGG + Chr3:4386453-4386472 MsG0380011744.01.T01:CDS 45.0%
GCAGAAAATAGCTTCAGTGC+AGG - Chr3:4390255-4390274 None:intergenic 45.0%
GCAGGATACGATGAGTGTAT+CGG + Chr3:4394373-4394392 MsG0380011744.01.T01:intron 45.0%
GCCAAAGGATCTGCAATTCA+CGG - Chr3:4386241-4386260 None:intergenic 45.0%
GCCACAACGAAGAGATAATG+TGG - Chr3:4388873-4388892 None:intergenic 45.0%
GGAGTAACTTTCAAGCTCGT+TGG - Chr3:4393216-4393235 None:intergenic 45.0%
GGTTCCGGCTATTGCAAATT+TGG + Chr3:4386425-4386444 MsG0380011744.01.T01:CDS 45.0%
GTACAGTTGAGCACATTTCC+TGG + Chr3:4394524-4394543 MsG0380011744.01.T01:intron 45.0%
GTATTCGGTTCCCAGAGAAA+GGG - Chr3:4392060-4392079 None:intergenic 45.0%
GTTATGAGACAAGGGAAAGG+GGG - Chr3:4386867-4386886 None:intergenic 45.0%
TACGACGGAACGTGTAAGAA+GGG - Chr3:4389676-4389695 None:intergenic 45.0%
TAGAAAACTCCTGCCATGCA+GGG + Chr3:4387637-4387656 MsG0380011744.01.T01:intron 45.0%
TAGGATTCATCCTAGCTAGG+TGG - Chr3:4389709-4389728 None:intergenic 45.0%
TATCTCTTCGTTGTGGCGAA+CGG + Chr3:4388876-4388895 MsG0380011744.01.T01:intron 45.0%
TATGCACAACTGAGCGATCA+AGG + Chr3:4388416-4388435 MsG0380011744.01.T01:intron 45.0%
TATGGCCTGGTGTAAACCTA+CGG - Chr3:4393431-4393450 None:intergenic 45.0%
TATTCCAGCCTCCCTAAAGT+TGG - Chr3:4394663-4394682 None:intergenic 45.0%
TATTCGGTTCCCAGAGAAAG+GGG - Chr3:4392059-4392078 None:intergenic 45.0%
TCCGTGAATTGCAGATCCTT+TGG + Chr3:4386237-4386256 MsG0380011744.01.T01:CDS 45.0%
TCTGTAGTCTTTCACGTTGC+AGG + Chr3:4391921-4391940 MsG0380011744.01.T01:intron 45.0%
TGAAGGTTCCTAGTGTGTTG+AGG + Chr3:4391104-4391123 MsG0380011744.01.T01:intron 45.0%
TGAGTGTTAAACTTGGCGTC+GGG + Chr3:4388099-4388118 MsG0380011744.01.T01:intron 45.0%
TGTATGGAGGAAGTAAGCCA+TGG - Chr3:4393998-4394017 None:intergenic 45.0%
TTACATGCGGAAGATGAGCA+TGG - Chr3:4391512-4391531 None:intergenic 45.0%
TTATGAGACAAGGGAAAGGG+GGG - Chr3:4386866-4386885 None:intergenic 45.0%
TTCTGCACCCTCCAACTTTA+GGG + Chr3:4394649-4394668 MsG0380011744.01.T01:three_prime_UTR 45.0%
TTGTACCAATCGTTGTCACC+TGG - Chr3:4393490-4393509 None:intergenic 45.0%
TTTCTCCCTGTGTGTTGCAT+GGG + Chr3:4392542-4392561 MsG0380011744.01.T01:intron 45.0%
! AAAGGGGGGATTCGGTTAAT+TGG - Chr3:4386852-4386871 None:intergenic 45.0%
! ACAAAGTGAGAGGAAGTGTG+TGG + Chr3:4391245-4391264 MsG0380011744.01.T01:intron 45.0%
! ATTTCCTGGTTCTTGGTGTG+TGG + Chr3:4394538-4394557 MsG0380011744.01.T01:CDS 45.0%
! CATGTATGTTTGGAGCTGCA+AGG - Chr3:4390913-4390932 None:intergenic 45.0%
! GAGCTTTTCCACAAAGTGAG+AGG + Chr3:4391235-4391254 MsG0380011744.01.T01:intron 45.0%
! GGGCCTGATAATCTAGAGTT+TGG - Chr3:4392039-4392058 None:intergenic 45.0%
! TAATCTAGAGTTTGGCCGGT+AGG - Chr3:4392031-4392050 None:intergenic 45.0%
! TCCCACGTTTGATAACCTAG+AGG - Chr3:4389515-4389534 None:intergenic 45.0%
! TGAGCACATTTCCTGGTTCT+TGG + Chr3:4394531-4394550 MsG0380011744.01.T01:CDS 45.0%
! TGAGGCAAAAGCTTGGTTCT+TGG - Chr3:4390971-4390990 None:intergenic 45.0%
! TGGTTCGGAGCAAAGATGAT+TGG + Chr3:4394068-4394087 MsG0380011744.01.T01:CDS 45.0%
! TTGCCTCCTTTTTGATGTGC+AGG + Chr3:4387026-4387045 MsG0380011744.01.T01:intron 45.0%
! TTTTCCACACACCAAGAACC+AGG - Chr3:4394545-4394564 None:intergenic 45.0%
! TTTTCTCCCTGTGTGTTGCA+TGG + Chr3:4392541-4392560 MsG0380011744.01.T01:intron 45.0%
!! CATACGGTGTCGATACTCAA+TGG + Chr3:4394048-4394067 MsG0380011744.01.T01:CDS 45.0%
!! CATTGAGTATCGACACCGTA+TGG - Chr3:4394050-4394069 None:intergenic 45.0%
!! GGTGTCGATACTCAATGGTT+CGG + Chr3:4394053-4394072 MsG0380011744.01.T01:CDS 45.0%
!! GTACGTACGTCATTTTGCAG+TGG - Chr3:4390400-4390419 None:intergenic 45.0%
!! TGCACTGAGAGAGTTGATAC+GGG - Chr3:4387159-4387178 None:intergenic 45.0%
!!! GTGGTTTTGAGGCAAAAGCT+TGG - Chr3:4390978-4390997 None:intergenic 45.0%
!! AATAATAAATTTAATTCATA+AGG + Chr3:4392419-4392438 MsG0380011744.01.T01:intron 5.0%
!!! ATTAATATTAATTTGTATTT+TGG - Chr3:4386745-4386764 None:intergenic 5.0%
!!! TGTTATATTATATTTTAATT+AGG - Chr3:4386968-4386987 None:intergenic 5.0%
AACCTTCCCATAACCCTGCA+TGG - Chr3:4387653-4387672 None:intergenic 50.0%
AAGAGAAAGGATGGGTCACG+TGG + Chr3:4391047-4391066 MsG0380011744.01.T01:intron 50.0%
AAGGTCGGTGTGGAAGTTGT+GGG + Chr3:4392679-4392698 MsG0380011744.01.T01:CDS 50.0%
ACGACGGAACGTGTAAGAAG+GGG - Chr3:4389675-4389694 None:intergenic 50.0%
AGTAATGCGTAAGGTCGGTG+TGG + Chr3:4392669-4392688 MsG0380011744.01.T01:CDS 50.0%
ATTGCAGATCCTTTGGCCAG+AGG + Chr3:4386244-4386263 MsG0380011744.01.T01:CDS 50.0%
CACCTGGTAATCCTGCAGAA+TGG - Chr3:4393474-4393493 None:intergenic 50.0%
CCGAGAGGAAGGAAGAGATA+AGG + Chr3:4391208-4391227 MsG0380011744.01.T01:intron 50.0%
CGTATTCGGTTCCCAGAGAA+AGG - Chr3:4392061-4392080 None:intergenic 50.0%
CGTGTAAGAAGGGGTAAACG+GGG - Chr3:4389666-4389685 None:intergenic 50.0%
CTACGACGGAACGTGTAAGA+AGG - Chr3:4389677-4389696 None:intergenic 50.0%
CTAGAAAACTCCTGCCATGC+AGG + Chr3:4387636-4387655 MsG0380011744.01.T01:intron 50.0%
CTTACACGTTCCGTCGTAGA+CGG + Chr3:4389678-4389697 MsG0380011744.01.T01:intron 50.0%
GAAGAACCCATGCAACACAC+AGG - Chr3:4392551-4392570 None:intergenic 50.0%
GATTATCAGGCCCCTTTCTC+TGG + Chr3:4392046-4392065 MsG0380011744.01.T01:intron 50.0%
GTAAACGGGGCACAGTCTAT+CGG - Chr3:4389653-4389672 None:intergenic 50.0%
TAAGGTCGGTGTGGAAGTTG+TGG + Chr3:4392678-4392697 MsG0380011744.01.T01:CDS 50.0%
TCCTAGGTTGTTGGCAACCT+CGG + Chr3:4388333-4388352 MsG0380011744.01.T01:intron 50.0%
TCTTGGTATAGGCAAGCCGT+AGG + Chr3:4393412-4393431 MsG0380011744.01.T01:intron 50.0%
TGCCATTCTGCAGGATTACC+AGG + Chr3:4393469-4393488 MsG0380011744.01.T01:CDS 50.0%
TGGTTGACAGCACAAACAGC+AGG - Chr3:4391680-4391699 None:intergenic 50.0%
TTGATTTCTCGGCAGGATGC+AGG + Chr3:4387920-4387939 MsG0380011744.01.T01:intron 50.0%
! ACGACAGTTTTTCCGACAGC+AGG + Chr3:4390609-4390628 MsG0380011744.01.T01:intron 50.0%
! AGTGAGAGGAAGTGTGTGGA+AGG + Chr3:4391249-4391268 MsG0380011744.01.T01:intron 50.0%
! CTAGTTTCGGCTAGCTAAGC+CGG + Chr3:4388632-4388651 MsG0380011744.01.T01:intron 50.0%
! GCCAGAGACCTTTTAGCACA+TGG + Chr3:4387741-4387760 MsG0380011744.01.T01:intron 50.0%
! GCTCTGGCTGATTCAGTATC+TGG - Chr3:4391602-4391621 None:intergenic 50.0%
! GGGGCGATCTGCAACATTTT+TGG + Chr3:4386472-4386491 MsG0380011744.01.T01:CDS 50.0%
! GTACCGATCTACTTTGCTGC+AGG + Chr3:4394355-4394374 MsG0380011744.01.T01:intron 50.0%
! GTTTTTGCTCAAGGCGGTTC+CGG + Chr3:4386410-4386429 MsG0380011744.01.T01:intron 50.0%
! TGCTGTTTGTGCTGTCAACC+AGG + Chr3:4391679-4391698 MsG0380011744.01.T01:CDS 50.0%
!! CACTGTTCGCGCTTTGAAAG+AGG + Chr3:4392777-4392796 MsG0380011744.01.T01:CDS 50.0%
!! CGTCATTTTGCAGTGGGACT+TGG - Chr3:4390393-4390412 None:intergenic 50.0%
!! CTGGGAGCACTGAAAGTTAC+AGG + Chr3:4392703-4392722 MsG0380011744.01.T01:CDS 50.0%
!! GCACTGAGAGAGTTGATACG+GGG - Chr3:4387158-4387177 None:intergenic 50.0%
!! GGGGATTCAAAGCTTGCTGA+AGG + Chr3:4391087-4391106 MsG0380011744.01.T01:intron 50.0%
!! GGTTTTATGGACTGCTGTGC+TGG - Chr3:4390107-4390126 None:intergenic 50.0%
!! TGAGTATCGACACCGTATGG+AGG - Chr3:4394047-4394066 None:intergenic 50.0%
AATGTTGCAGATCGCCCCGA+TGG - Chr3:4386470-4386489 None:intergenic 55.0%
ACTCCTGCCATGCAGGGTTA+TGG + Chr3:4387643-4387662 MsG0380011744.01.T01:intron 55.0%
AGAAGTTCCGCCAGAAGCCT+AGG + Chr3:4394567-4394586 MsG0380011744.01.T01:CDS 55.0%
CCAGCCTCCCTAAAGTTGGA+GGG - Chr3:4394659-4394678 None:intergenic 55.0%
CCAGGCCATAGCTCGTTGTA+TGG + Chr3:4393441-4393460 MsG0380011744.01.T01:CDS 55.0%
CCATACAACGAGCTATGGCC+TGG - Chr3:4393444-4393463 None:intergenic 55.0%
CCTAGGTTGTTGGCAACCTC+GGG + Chr3:4388334-4388353 MsG0380011744.01.T01:intron 55.0%
CTAGGTTGTTGGCAACCTCG+GGG + Chr3:4388335-4388354 MsG0380011744.01.T01:intron 55.0%
CTCCTGCCATGCAGGGTTAT+GGG + Chr3:4387644-4387663 MsG0380011744.01.T01:intron 55.0%
GACAAGGGAAAGGGGGGATT+CGG - Chr3:4386860-4386879 None:intergenic 55.0%
GACGGAGAATCCACCTAGCT+AGG + Chr3:4389696-4389715 MsG0380011744.01.T01:intron 55.0%
GATGGGTCACGTGGCATAGA+GGG + Chr3:4391056-4391075 MsG0380011744.01.T01:intron 55.0%
GCAAGCCGTAGGTTTACACC+AGG + Chr3:4393423-4393442 MsG0380011744.01.T01:CDS 55.0%
GCATGTTTGCCAGGTTTGGC+AGG + Chr3:4393535-4393554 MsG0380011744.01.T01:CDS 55.0%
GGAGGAACTGCATGTTTGCC+AGG + Chr3:4393526-4393545 MsG0380011744.01.T01:CDS 55.0%
GGTGTGGAAGTTGTGGGACT+GGG + Chr3:4392685-4392704 MsG0380011744.01.T01:CDS 55.0%
TCCAGCCTCCCTAAAGTTGG+AGG - Chr3:4394660-4394679 None:intergenic 55.0%
TGCCATGCAGGGTTATGGGA+AGG + Chr3:4387648-4387667 MsG0380011744.01.T01:intron 55.0%
TTCCCATAACCCTGCATGGC+AGG - Chr3:4387649-4387668 None:intergenic 55.0%
! GGTGGATTCTCCGTCTACGA+CGG - Chr3:4389691-4389710 None:intergenic 55.0%
! GTATCGACACCGTATGGAGG+AGG - Chr3:4394044-4394063 None:intergenic 55.0%
! TGCACCCTCCAACTTTAGGG+AGG + Chr3:4394652-4394671 MsG0380011744.01.T01:three_prime_UTR 55.0%
AGCCTAGGCTCGGCCTCATA+TGG + Chr3:4394582-4394601 MsG0380011744.01.T01:CDS 60.0%
CACCATATGAGGCCGAGCCT+AGG - Chr3:4394587-4394606 None:intergenic 60.0%
CCCGAGGTTGCCAACAACCT+AGG - Chr3:4388337-4388356 None:intergenic 60.0%
CGGTGTGGAAGTTGTGGGAC+TGG + Chr3:4392684-4392703 MsG0380011744.01.T01:CDS 60.0%
GAATGAGGGAGTGAGCCGAG+AGG + Chr3:4391193-4391212 MsG0380011744.01.T01:intron 60.0%
GGATGGGTCACGTGGCATAG+AGG + Chr3:4391055-4391074 MsG0380011744.01.T01:intron 60.0%
GGTCAGAGAGCTCAGGTTCC+TGG + Chr3:4386294-4386313 MsG0380011744.01.T01:CDS 60.0%
TGAATGACAGCTGGGGCCTC+TGG - Chr3:4386263-4386282 None:intergenic 60.0%
TTCCGCCAGAAGCCTAGGCT+CGG + Chr3:4394572-4394591 MsG0380011744.01.T01:CDS 60.0%
TTGGCAACCTCGGGGAACCT+AGG + Chr3:4388343-4388362 MsG0380011744.01.T01:intron 60.0%
! CCCTCCAACTTTAGGGAGGC+TGG + Chr3:4394656-4394675 MsG0380011744.01.T01:three_prime_UTR 60.0%
GAGGGAGTGAGCCGAGAGGA+AGG + Chr3:4391197-4391216 MsG0380011744.01.T01:intron 65.0%
TGAGGCCGAGCCTAGGCTTC+TGG - Chr3:4394580-4394599 None:intergenic 65.0%
TGGCGATCCTAGGTTCCCCG+AGG - Chr3:4388353-4388372 None:intergenic 65.0%
CAGCTGGGGCCTCTGGCCAA+AGG - Chr3:4386256-4386275 None:intergenic 70.0%
GGCCGAGCCTAGGCTTCTGG+CGG - Chr3:4394577-4394596 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 4386171 4394862 4386171 ID=MsG0380011744.01;Name=MsG0380011744.01
Chr3 mRNA 4386171 4394862 4386171 ID=MsG0380011744.01.T01;Parent=MsG0380011744.01;Name=MsG0380011744.01.T01;_AED=0.44;_eAED=0.45;_QI=0|0.9|0.81|1|0.9|1|11|255|389
Chr3 exon 4386171 4386333 4386171 ID=MsG0380011744.01.T01:exon:1083;Parent=MsG0380011744.01.T01
Chr3 exon 4386423 4386493 4386423 ID=MsG0380011744.01.T01:exon:1084;Parent=MsG0380011744.01.T01
Chr3 exon 4387048 4387115 4387048 ID=MsG0380011744.01.T01:exon:1085;Parent=MsG0380011744.01.T01
Chr3 exon 4387935 4387996 4387935 ID=MsG0380011744.01.T01:exon:1086;Parent=MsG0380011744.01.T01
Chr3 exon 4391603 4391700 4391603 ID=MsG0380011744.01.T01:exon:1087;Parent=MsG0380011744.01.T01
Chr3 exon 4392263 4392344 4392263 ID=MsG0380011744.01.T01:exon:1088;Parent=MsG0380011744.01.T01
Chr3 exon 4392656 4392798 4392656 ID=MsG0380011744.01.T01:exon:1089;Parent=MsG0380011744.01.T01
Chr3 exon 4392903 4393054 4392903 ID=MsG0380011744.01.T01:exon:1090;Parent=MsG0380011744.01.T01
Chr3 exon 4393423 4393556 4393423 ID=MsG0380011744.01.T01:exon:1091;Parent=MsG0380011744.01.T01
Chr3 exon 4393976 4394094 4393976 ID=MsG0380011744.01.T01:exon:1092;Parent=MsG0380011744.01.T01
Chr3 exon 4394530 4394862 4394530 ID=MsG0380011744.01.T01:exon:1093;Parent=MsG0380011744.01.T01
Chr3 CDS 4386171 4386333 4386171 ID=MsG0380011744.01.T01:cds;Parent=MsG0380011744.01.T01
Chr3 CDS 4386423 4386493 4386423 ID=MsG0380011744.01.T01:cds;Parent=MsG0380011744.01.T01
Chr3 CDS 4387048 4387115 4387048 ID=MsG0380011744.01.T01:cds;Parent=MsG0380011744.01.T01
Chr3 CDS 4387935 4387996 4387935 ID=MsG0380011744.01.T01:cds;Parent=MsG0380011744.01.T01
Chr3 CDS 4391603 4391700 4391603 ID=MsG0380011744.01.T01:cds;Parent=MsG0380011744.01.T01
Chr3 CDS 4392263 4392344 4392263 ID=MsG0380011744.01.T01:cds;Parent=MsG0380011744.01.T01
Chr3 CDS 4392656 4392798 4392656 ID=MsG0380011744.01.T01:cds;Parent=MsG0380011744.01.T01
Chr3 CDS 4392903 4393054 4392903 ID=MsG0380011744.01.T01:cds;Parent=MsG0380011744.01.T01
Chr3 CDS 4393423 4393556 4393423 ID=MsG0380011744.01.T01:cds;Parent=MsG0380011744.01.T01
Chr3 CDS 4393976 4394094 4393976 ID=MsG0380011744.01.T01:cds;Parent=MsG0380011744.01.T01
Chr3 CDS 4394530 4394607 4394530 ID=MsG0380011744.01.T01:cds;Parent=MsG0380011744.01.T01
Chr3 three_prime_UTR 4394608 4394862 4394608 ID=MsG0380011744.01.T01:three_prime_utr;Parent=MsG0380011744.01.T01
Gene Sequence

>MsG0380011744.01.T01

TTGGTGTTGTGTTTTGATGGGTCTAGAGATGATTGGTATTTCATGAAATCAGATTTTGAGATTCCGTCCGTGAATTGCAGATCCTTTGGCCAGAGGCCCCAGCTGTCATTCAAACATATTTATGGTCAGAGAGCTCAGGTTCCTGGTGCTATTATCATTGATGGCGGTTCCGGCTATTGCAAATTTGGTTGGAGCAAATATGCTTGTCCATCGGGGCGATCTGCAACATTTTTGGAATTTGGCAACATTGAGTCGCCAATGTATACTAGGCTTCGACATTTTTTTGCAACTATTTATAACAGGATGCAGGTGAAACCAAAAAATCAACCGGTTATTGTTTCTATACCAATATGCCATTATGATGATACTGAATCAGCCAGAGCATCGAGACAACAACTTAAAGAAGCAATTTATGCTTCCCTGTTCGACTTGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGCAACTCTAGCTCTGTATGCTGCAAAACGAACTTCTGGAATAGCTGTTAATATAGGTTTTCAAGTGACATCAATAGTTCCAATTTTTAATGGTAAAGTAATGCGTAAGGTCGGTGTGGAAGTTGTGGGACTGGGAGCACTGAAAGTTACAGGATTTCTTAAGGAGAAGATGCAACAGAACAACCTAAATTTTCAATCATTGTACACTGTTCGCGCTTTGAAAGAGAATCTATGCTATGTTGCTCTTGATTATGAAGCTGAGCTATTGAAAGAAAACACACAAGCATCATTTCAAGCTACAGGAGATGGATTGTTTACACTTTCAAAAGAGAGGTTTCAGACAGCTGAGATTTTATTCAAGCCACATCTTGCTGGAGTGCAAGCCGTAGGTTTACACCAGGCCATAGCTCGTTGTATGGAGAATTGCCATTCTGCAGGATTACCAGGTGACAACGATTGGTACAAATCTGTAGTTTTATCAGGAGGAACTGCATGTTTGCCAGGTTTGGCAGAAAGATTAGAGAAGGAACTCCATGGCTTACTTCCTCCATACATGTCCAATGGAATTAGAGTCATACCTCCTCCATACGGTGTCGATACTCAATGGTTCGGAGCAAAGATGATTGGCAATTTGAGCACATTTCCTGGTTCTTGGTGTGTGGAAAAAAAGAAGTTCCGCCAGAAGCCTAGGCTCGGCCTCATATGGTGA

Protein sequence

>MsG0380011744.01.T01

LVLCFDGSRDDWYFMKSDFEIPSVNCRSFGQRPQLSFKHIYGQRAQVPGAIIIDGGSGYCKFGWSKYACPSGRSATFLEFGNIESPMYTRLRHFFATIYNRMQVKPKNQPVIVSIPICHYDDTESARASRQQLKEAIYASLFDLNVPAVCAVNQATLALYAAKRTSGIAVNIGFQVTSIVPIFNGKVMRKVGVEVVGLGALKVTGFLKEKMQQNNLNFQSLYTVRALKENLCYVALDYEAELLKENTQASFQATGDGLFTLSKERFQTAEILFKPHLAGVQAVGLHQAIARCMENCHSAGLPGDNDWYKSVVLSGGTACLPGLAERLEKELHGLLPPYMSNGIRVIPPPYGVDTQWFGAKMIGNLSTFPGSWCVEKKKFRQKPRLGLIW*