Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006896.01.T01 | XP_024632312.1 | 77.846 | 325 | 26 | 2 | 6 | 285 | 59 | 382 | 2.65E-154 | 464 |
| MsG0280006896.01.T01 | XP_024632312.1 | 94.4 | 125 | 7 | 0 | 297 | 421 | 555 | 679 | 6.63E-70 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006896.01.T01 | G7ZXK0 | 77.846 | 325 | 26 | 2 | 6 | 285 | 59 | 382 | 1.27e-154 | 464 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048773.01 | MsG0280006896.01 | 0.817102 | 3.924181e-52 | 2.831548e-49 |
| MsG0080048845.01 | MsG0280006896.01 | 0.826759 | 2.273850e-54 | 2.152031e-51 |
| MsG0080049130.01 | MsG0280006896.01 | 0.816188 | 6.288953e-52 | 4.426007e-49 |
| MsG0180000045.01 | MsG0280006896.01 | 0.831778 | 1.376138e-55 | 1.508764e-52 |
| MsG0180000114.01 | MsG0280006896.01 | 0.821667 | 3.574268e-53 | 2.926646e-50 |
| MsG0180000159.01 | MsG0280006896.01 | 0.827277 | 1.710041e-54 | 1.643203e-51 |
| MsG0180000218.01 | MsG0280006896.01 | -0.801471 | 8.866730e-49 | 4.237866e-46 |
| MsG0180000241.01 | MsG0280006896.01 | 0.801133 | 1.039586e-48 | 4.926917e-46 |
| MsG0180000599.01 | MsG0280006896.01 | 0.806201 | 9.230499e-50 | 4.979979e-47 |
| MsG0180000638.01 | MsG0280006896.01 | 0.802165 | 6.385360e-49 | 3.106196e-46 |
| MsG0180000646.01 | MsG0280006896.01 | 0.829989 | 3.780875e-55 | 3.932130e-52 |
| MsG0180000647.01 | MsG0280006896.01 | 0.823466 | 1.364489e-53 | 1.175763e-50 |
| MsG0180000785.01 | MsG0280006896.01 | 0.831878 | 1.300398e-55 | 1.429868e-52 |
| MsG0180000843.01 | MsG0280006896.01 | 0.831331 | 1.773375e-55 | 1.918299e-52 |
| MsG0180001064.01 | MsG0280006896.01 | 0.852427 | 4.649017e-61 | 9.710933e-58 |
| MsG0180001100.01 | MsG0280006896.01 | 0.836091 | 1.146264e-56 | 1.429636e-53 |
| MsG0180001105.01 | MsG0280006896.01 | 0.907903 | 3.062502e-81 | 5.546752e-77 |
| MsG0180001371.01 | MsG0280006896.01 | 0.812156 | 4.885190e-51 | 3.082647e-48 |
| MsG0180002399.01 | MsG0280006896.01 | 0.815264 | 1.010407e-51 | 6.933023e-49 |
| MsG0180003146.01 | MsG0280006896.01 | 0.800455 | 1.429729e-48 | 6.659970e-46 |
| MsG0180003353.01 | MsG0280006896.01 | 0.818766 | 1.651713e-52 | 1.247632e-49 |
| MsG0180003906.01 | MsG0280006896.01 | 0.823495 | 1.343371e-53 | 1.158588e-50 |
| MsG0180004103.01 | MsG0280006896.01 | 0.842755 | 2.130481e-58 | 3.262064e-55 |
| MsG0180004106.01 | MsG0280006896.01 | 0.823385 | 1.424993e-53 | 1.225015e-50 |
| MsG0180004188.01 | MsG0280006896.01 | 0.830676 | 2.567857e-55 | 2.724557e-52 |
| MsG0180004246.01 | MsG0280006896.01 | 0.859112 | 5.181485e-63 | 1.352940e-59 |
| MsG0180004542.01 | MsG0280006896.01 | 0.817027 | 4.078869e-52 | 2.937321e-49 |
| MsG0180004814.01 | MsG0280006896.01 | 0.851306 | 9.669296e-61 | 1.948978e-57 |
| MsG0180004934.01 | MsG0280006896.01 | 0.825606 | 4.277774e-54 | 3.917838e-51 |
| MsG0180004987.01 | MsG0280006896.01 | 0.805226 | 1.478438e-49 | 7.779194e-47 |
| MsG0180005039.01 | MsG0280006896.01 | 0.807589 | 4.694177e-50 | 2.624725e-47 |
| MsG0180005292.01 | MsG0280006896.01 | 0.858154 | 1.000633e-62 | 2.529572e-59 |
| MsG0180005349.01 | MsG0280006896.01 | 0.805406 | 1.355571e-49 | 7.165902e-47 |
| MsG0180005418.01 | MsG0280006896.01 | 0.821593 | 3.718014e-53 | 3.037866e-50 |
| MsG0180005568.01 | MsG0280006896.01 | 0.837632 | 4.634874e-57 | 6.057269e-54 |
| MsG0180005803.01 | MsG0280006896.01 | 0.855464 | 6.198938e-62 | 1.432508e-58 |
| MsG0180005807.01 | MsG0280006896.01 | 0.856671 | 2.748834e-62 | 6.610537e-59 |
| MsG0180005829.01 | MsG0280006896.01 | 0.818058 | 2.389560e-52 | 1.769994e-49 |
| MsG0280006587.01 | MsG0280006896.01 | 0.808466 | 3.054732e-50 | 1.747954e-47 |
| MsG0280006896.01 | MsG0280006913.01 | 0.804225 | 2.392525e-49 | 1.226811e-46 |
| MsG0280006896.01 | MsG0280007118.01 | 0.801447 | 8.967403e-49 | 4.283456e-46 |
| MsG0280006896.01 | MsG0280007976.01 | 0.826471 | 2.663784e-54 | 2.500429e-51 |
| MsG0280006896.01 | MsG0280008103.01 | 0.817895 | 2.600610e-52 | 1.917760e-49 |
| MsG0280006896.01 | MsG0280008709.01 | 0.835844 | 1.324434e-56 | 1.639392e-53 |
| MsG0280006896.01 | MsG0280008738.01 | 0.827708 | 1.347777e-54 | 1.311369e-51 |
| MsG0280006896.01 | MsG0280008932.01 | 0.822750 | 2.003852e-53 | 1.692316e-50 |
| MsG0280006896.01 | MsG0280008942.01 | 0.800299 | 1.538085e-48 | 7.136860e-46 |
| MsG0280006896.01 | MsG0280009256.01 | 0.806808 | 6.873125e-50 | 3.766148e-47 |
| MsG0280006896.01 | MsG0280009507.01 | 0.819138 | 1.359083e-52 | 1.037123e-49 |
| MsG0280006896.01 | MsG0280009869.01 | 0.854457 | 1.215191e-61 | 2.715517e-58 |
| MsG0280006896.01 | MsG0280010198.01 | 0.827361 | 1.632049e-54 | 1.572317e-51 |
| MsG0280006896.01 | MsG0280010257.01 | 0.800523 | 1.384602e-48 | 6.460961e-46 |
| MsG0280006896.01 | MsG0280010564.01 | 0.824395 | 8.259571e-54 | 7.306597e-51 |
| MsG0280006896.01 | MsG0280010916.01 | 0.818881 | 1.554797e-52 | 1.178208e-49 |
| MsG0280006896.01 | MsG0280010975.01 | 0.855950 | 4.471799e-62 | 1.050235e-58 |
| MsG0280006896.01 | MsG0280011270.01 | 0.828208 | 1.021495e-54 | 1.008591e-51 |
| MsG0280006896.01 | MsG0280011272.01 | -0.803934 | 2.750259e-49 | 1.399911e-46 |
| MsG0280006896.01 | MsG0280011411.01 | 0.826912 | 2.091006e-54 | 1.987978e-51 |
| MsG0280006896.01 | MsG0380012011.01 | 0.801021 | 1.095631e-48 | 5.177997e-46 |
| MsG0280006896.01 | MsG0380013050.01 | -0.809288 | 2.037642e-50 | 1.191613e-47 |
| MsG0280006896.01 | MsG0380013177.01 | 0.822216 | 2.666618e-53 | 2.217840e-50 |
| MsG0280006896.01 | MsG0380013687.01 | 0.807485 | 4.939220e-50 | 2.754477e-47 |
| MsG0280006896.01 | MsG0380014624.01 | 0.839169 | 1.860984e-57 | 2.548651e-54 |
| MsG0280006896.01 | MsG0380014909.01 | 0.814564 | 1.445196e-51 | 9.730338e-49 |
| MsG0280006896.01 | MsG0380015501.01 | 0.805138 | 1.542620e-49 | 8.098804e-47 |
| MsG0280006896.01 | MsG0380015545.01 | 0.827155 | 1.828631e-54 | 1.750830e-51 |
| MsG0280006896.01 | MsG0380015603.01 | 0.809361 | 1.965195e-50 | 1.151526e-47 |
| MsG0280006896.01 | MsG0380015645.01 | 0.805382 | 1.371155e-49 | 7.243737e-47 |
| MsG0280006896.01 | MsG0380015847.01 | -0.805627 | 1.218544e-49 | 6.478160e-47 |
| MsG0280006896.01 | MsG0380015896.01 | 0.858307 | 9.014507e-63 | 2.290657e-59 |
| MsG0280006896.01 | MsG0380015897.01 | 0.809078 | 2.260385e-50 | 1.314445e-47 |
| MsG0280006896.01 | MsG0380015921.01 | 0.846835 | 1.691960e-59 | 2.949790e-56 |
| MsG0280006896.01 | MsG0380016074.01 | 0.800864 | 1.179800e-48 | 5.553333e-46 |
| MsG0280006896.01 | MsG0380016284.01 | 0.828107 | 1.080386e-54 | 1.063615e-51 |
| MsG0280006896.01 | MsG0380016762.01 | 0.847882 | 8.729418e-60 | 1.573678e-56 |
| MsG0280006896.01 | MsG0380016879.01 | 0.826816 | 2.203759e-54 | 2.089224e-51 |
| MsG0280006896.01 | MsG0380017293.01 | 0.829068 | 6.329920e-55 | 6.407981e-52 |
| MsG0280006896.01 | MsG0380017661.01 | 0.826798 | 2.225553e-54 | 2.108726e-51 |
| MsG0280006896.01 | MsG0380017728.01 | 0.835999 | 1.209967e-56 | 1.504753e-53 |
| MsG0280006896.01 | MsG0380017931.01 | 0.833717 | 4.541492e-56 | 5.273711e-53 |
| MsG0280006896.01 | MsG0380018037.01 | 0.807850 | 4.132817e-50 | 2.326662e-47 |
| MsG0280006896.01 | MsG0380018046.01 | -0.821043 | 4.980584e-53 | 4.008151e-50 |
| MsG0280006896.01 | MsG0380018069.01 | 0.808078 | 3.696002e-50 | 2.093341e-47 |
| MsG0280006896.01 | MsG0480018232.01 | 0.813637 | 2.314213e-51 | 1.519447e-48 |
| MsG0280006896.01 | MsG0480018323.01 | 0.820391 | 7.029612e-53 | 5.555461e-50 |
| MsG0280006896.01 | MsG0480018324.01 | 0.842494 | 2.499134e-58 | 3.795975e-55 |
| MsG0280006896.01 | MsG0480019007.01 | 0.827738 | 1.325427e-54 | 1.290732e-51 |
| MsG0280006896.01 | MsG0480019711.01 | 0.813645 | 2.304886e-51 | 1.513675e-48 |
| MsG0280006896.01 | MsG0480021207.01 | 0.810330 | 1.216434e-50 | 7.311461e-48 |
| MsG0280006896.01 | MsG0480021294.01 | 0.829901 | 3.971931e-55 | 4.120702e-52 |
| MsG0280006896.01 | MsG0480021406.01 | 0.813860 | 2.066788e-51 | 1.365206e-48 |
| MsG0280006896.01 | MsG0480021564.01 | 0.825876 | 3.689609e-54 | 3.405496e-51 |
| MsG0280006896.01 | MsG0480022260.01 | 0.801122 | 1.045156e-48 | 4.951789e-46 |
| MsG0280006896.01 | MsG0480022537.01 | 0.844166 | 8.947406e-59 | 1.432209e-55 |
| MsG0280006896.01 | MsG0480022617.01 | 0.848675 | 5.268409e-60 | 9.743384e-57 |
| MsG0280006896.01 | MsG0480022624.01 | 0.829939 | 3.886571e-55 | 4.036441e-52 |
| MsG0280006896.01 | MsG0480022804.01 | 0.801306 | 9.584210e-49 | 4.561818e-46 |
| MsG0280006896.01 | MsG0480022918.01 | 0.818986 | 1.472342e-52 | 1.119035e-49 |
| MsG0280006896.01 | MsG0480023166.01 | 0.807442 | 5.044123e-50 | 2.809784e-47 |
| MsG0280006896.01 | MsG0480023381.01 | 0.832656 | 8.347623e-56 | 9.391296e-53 |
| MsG0280006896.01 | MsG0480023422.01 | 0.800006 | 1.764497e-48 | 8.126321e-46 |
| MsG0280006896.01 | MsG0480023553.01 | 0.806381 | 8.458155e-50 | 4.584069e-47 |
| MsG0280006896.01 | MsG0480023565.01 | 0.809472 | 1.860698e-50 | 1.093443e-47 |
| MsG0280006896.01 | MsG0480023578.01 | 0.846253 | 2.438861e-59 | 4.172582e-56 |
| MsG0280006896.01 | MsG0480023845.01 | 0.808662 | 2.773550e-50 | 1.595100e-47 |
| MsG0280006896.01 | MsG0480023890.01 | 0.801205 | 1.005027e-48 | 4.771469e-46 |
| MsG0280006896.01 | MsG0480023978.01 | 0.810034 | 1.408938e-50 | 8.403824e-48 |
| MsG0280006896.01 | MsG0580024679.01 | 0.814251 | 1.694238e-51 | 1.131071e-48 |
| MsG0280006896.01 | MsG0580024717.01 | 0.838622 | 2.577070e-57 | 3.471372e-54 |
| MsG0280006896.01 | MsG0580024759.01 | 0.836073 | 1.158424e-56 | 1.443973e-53 |
| MsG0280006896.01 | MsG0580024829.01 | 0.804873 | 1.753076e-49 | 9.141858e-47 |
| MsG0280006896.01 | MsG0580024873.01 | 0.812938 | 3.295352e-51 | 2.122966e-48 |
| MsG0280006896.01 | MsG0580024997.01 | 0.812841 | 3.460647e-51 | 2.223664e-48 |
| MsG0280006896.01 | MsG0580025231.01 | 0.805805 | 1.118040e-49 | 5.971142e-47 |
| MsG0280006896.01 | MsG0580025625.01 | 0.805235 | 1.471909e-49 | 7.746700e-47 |
| MsG0280006896.01 | MsG0580025845.01 | 0.815679 | 8.170818e-52 | 5.670927e-49 |
| MsG0280006896.01 | MsG0580026271.01 | 0.810629 | 1.048111e-50 | 6.350222e-48 |
| MsG0280006896.01 | MsG0580027979.01 | 0.800338 | 1.510152e-48 | 7.014113e-46 |
| MsG0280006896.01 | MsG0580028024.01 | 0.849010 | 4.252828e-60 | 7.952332e-57 |
| MsG0280006896.01 | MsG0580028445.01 | 0.809614 | 1.734474e-50 | 1.023225e-47 |
| MsG0280006896.01 | MsG0580028723.01 | 0.831262 | 1.844377e-55 | 1.990874e-52 |
| MsG0280006896.01 | MsG0580028853.01 | 0.800505 | 1.396332e-48 | 6.512675e-46 |
| MsG0280006896.01 | MsG0580028925.01 | 0.845752 | 3.338038e-59 | 5.620143e-56 |
| MsG0280006896.01 | MsG0580029414.01 | 0.842523 | 2.454279e-58 | 3.731346e-55 |
| MsG0280006896.01 | MsG0580029529.01 | 0.825869 | 3.705612e-54 | 3.419533e-51 |
| MsG0280006896.01 | MsG0580029912.01 | 0.813253 | 2.810583e-51 | 1.826106e-48 |
| MsG0280006896.01 | MsG0680030464.01 | 0.803147 | 4.004996e-49 | 1.997569e-46 |
| MsG0280006896.01 | MsG0680030680.01 | 0.838990 | 2.069926e-57 | 2.819568e-54 |
| MsG0280006896.01 | MsG0680031056.01 | 0.801619 | 8.266027e-49 | 3.965509e-46 |
| MsG0280006896.01 | MsG0680032006.01 | 0.825620 | 4.245550e-54 | 3.889871e-51 |
| MsG0280006896.01 | MsG0680033377.01 | 0.804516 | 2.080503e-49 | 1.074831e-46 |
| MsG0280006896.01 | MsG0680033465.01 | 0.819427 | 1.168227e-52 | 8.987144e-50 |
| MsG0280006896.01 | MsG0680034235.01 | 0.838688 | 2.478942e-57 | 3.345760e-54 |
| MsG0280006896.01 | MsG0680034766.01 | 0.831827 | 1.338266e-55 | 1.469309e-52 |
| MsG0280006896.01 | MsG0680034767.01 | 0.841967 | 3.445010e-58 | 5.146376e-55 |
| MsG0280006896.01 | MsG0680035307.01 | 0.844374 | 7.867639e-59 | 1.267528e-55 |
| MsG0280006896.01 | MsG0680035308.01 | 0.825810 | 3.826768e-54 | 3.525368e-51 |
| MsG0280006896.01 | MsG0680035707.01 | 0.823371 | 1.435656e-53 | 1.233709e-50 |
| MsG0280006896.01 | MsG0680035731.01 | 0.818200 | 2.219084e-52 | 1.650187e-49 |
| MsG0280006896.01 | MsG0780036263.01 | 0.818184 | 2.238061e-52 | 1.663577e-49 |
| MsG0280006896.01 | MsG0780036517.01 | 0.853615 | 2.125728e-61 | 4.620552e-58 |
| MsG0280006896.01 | MsG0780036567.01 | 0.818489 | 1.908770e-52 | 1.430822e-49 |
| MsG0280006896.01 | MsG0780036803.01 | 0.824931 | 6.178611e-54 | 5.551246e-51 |
| MsG0280006896.01 | MsG0780037399.01 | 0.819577 | 1.079435e-52 | 8.339170e-50 |
| MsG0280006896.01 | MsG0780037701.01 | 0.834742 | 2.513927e-56 | 3.010203e-53 |
| MsG0280006896.01 | MsG0780037808.01 | 0.816748 | 4.712633e-52 | 3.367733e-49 |
| MsG0280006896.01 | MsG0780037946.01 | 0.813534 | 2.438509e-51 | 1.596667e-48 |
| MsG0280006896.01 | MsG0780039186.01 | 0.810422 | 1.161627e-50 | 6.998921e-48 |
| MsG0280006896.01 | MsG0780039233.01 | 0.816738 | 4.737598e-52 | 3.384605e-49 |
| MsG0280006896.01 | MsG0780039975.01 | 0.851167 | 1.058324e-60 | 2.123274e-57 |
| MsG0280006896.01 | MsG0780040278.01 | 0.816510 | 5.327951e-52 | 3.782626e-49 |
| MsG0280006896.01 | MsG0780040935.01 | 0.806747 | 7.078467e-50 | 3.872529e-47 |
| MsG0280006896.01 | MsG0780041004.01 | 0.802897 | 4.510056e-49 | 2.235300e-46 |
| MsG0280006896.01 | MsG0780041088.01 | 0.836467 | 9.198325e-57 | 1.160244e-53 |
| MsG0280006896.01 | MsG0780041091.01 | 0.867077 | 1.784526e-65 | 6.150824e-62 |
| MsG0280006896.01 | MsG0780041092.01 | 0.829101 | 6.215283e-55 | 6.298298e-52 |
| MsG0280006896.01 | MsG0780041187.01 | 0.819966 | 8.799171e-53 | 6.871977e-50 |
| MsG0280006896.01 | MsG0780041262.01 | 0.823106 | 1.655525e-53 | 1.412251e-50 |
| MsG0280006896.01 | MsG0780041272.01 | 0.811709 | 6.113718e-51 | 3.811455e-48 |
| MsG0280006896.01 | MsG0780041301.01 | 0.817599 | 3.032914e-52 | 2.218462e-49 |
| MsG0280006896.01 | MsG0780041634.01 | 0.800308 | 1.531742e-48 | 7.109094e-46 |
| MsG0280006896.01 | MsG0880042022.01 | 0.804252 | 2.362010e-49 | 1.211993e-46 |
| MsG0280006896.01 | MsG0880042343.01 | 0.812774 | 3.579160e-51 | 2.295814e-48 |
| MsG0280006896.01 | MsG0880042695.01 | 0.820041 | 8.455729e-53 | 6.618003e-50 |
| MsG0280006896.01 | MsG0880042988.01 | 0.807999 | 3.841621e-50 | 2.171305e-47 |
| MsG0280006896.01 | MsG0880043250.01 | 0.803598 | 3.229947e-49 | 1.629874e-46 |
| MsG0280006896.01 | MsG0880043965.01 | 0.818464 | 1.933596e-52 | 1.448535e-49 |
| MsG0280006896.01 | MsG0880044043.01 | 0.843144 | 1.679000e-58 | 2.602387e-55 |
| MsG0280006896.01 | MsG0880044105.01 | 0.805969 | 1.032451e-49 | 5.537475e-47 |
| MsG0280006896.01 | MsG0880044487.01 | 0.819556 | 1.091651e-52 | 8.428352e-50 |
| MsG0280006896.01 | MsG0880044538.01 | 0.823766 | 1.160676e-53 | 1.008816e-50 |
| MsG0280006896.01 | MsG0880044884.01 | 0.851772 | 7.136902e-61 | 1.460032e-57 |
| MsG0280006896.01 | MsG0880045044.01 | 0.825235 | 5.234551e-54 | 4.743859e-51 |
| MsG0280006896.01 | MsG0880045323.01 | 0.830434 | 2.943245e-55 | 3.100501e-52 |
| MsG0280006896.01 | MsG0880045617.01 | 0.807800 | 4.235477e-50 | 2.381434e-47 |
| MsG0280006896.01 | MsG0880045668.01 | 0.828227 | 1.010526e-54 | 9.982840e-52 |
| MsG0280006896.01 | MsG0880045771.01 | 0.846896 | 1.628591e-59 | 2.844578e-56 |
| MsG0280006896.01 | MsG0880046268.01 | 0.815986 | 6.978907e-52 | 4.884446e-49 |
| MsG0280006896.01 | MsG0880046723.01 | 0.860365 | 2.172873e-63 | 5.924944e-60 |
| MsG0280006896.01 | MsG0880046735.01 | 0.811963 | 5.381688e-51 | 3.378030e-48 |
| MsG0280006896.01 | MsG0880046736.01 | 0.819374 | 1.200876e-52 | 9.223927e-50 |
| MsG0280006896.01 | MsG0880046833.01 | 0.811978 | 5.341036e-51 | 3.353910e-48 |
| MsG0280006896.01 | MsG0880047152.01 | 0.810770 | 9.769077e-51 | 5.941312e-48 |
| MsG0280006896.01 | MsG0880047156.01 | 0.821136 | 4.740350e-53 | 3.824433e-50 |
| MsG0280006896.01 | MsG0880047306.01 | 0.804819 | 1.798397e-49 | 9.365034e-47 |
| MsG0280006896.01 | MsG0880047394.01 | 0.842913 | 1.933843e-58 | 2.975735e-55 |
| MsG0280006896.01 | MsG0880047519.01 | 0.835840 | 1.327445e-56 | 1.642942e-53 |
| MsG0280006896.01 | MsG0880047614.01 | 0.811505 | 6.771172e-51 | 4.198969e-48 |
| MsG0280006896.01 | MsG0880047770.01 | 0.824514 | 7.747069e-54 | 6.877084e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006896.01.T01 | MTR_2g016190 | 77.846 | 325 | 26 | 2 | 6 | 285 | 59 | 382 | 3.21e-158 | 464 |
| MsG0280006896.01.T01 | MTR_2g016190 | 94.400 | 125 | 7 | 0 | 297 | 421 | 555 | 679 | 8.03e-74 | 245 |
| MsG0280006896.01.T01 | MTR_4g065073 | 35.766 | 411 | 146 | 13 | 110 | 412 | 115 | 515 | 3.10e-47 | 171 |
| MsG0280006896.01.T01 | MTR_8g086460 | 35.766 | 411 | 146 | 13 | 110 | 412 | 115 | 515 | 3.10e-47 | 171 |
| MsG0280006896.01.T01 | MTR_4g080050 | 36.318 | 201 | 109 | 8 | 6 | 200 | 68 | 255 | 3.90e-23 | 103 |
| MsG0280006896.01.T01 | MTR_2g093020 | 38.393 | 112 | 63 | 3 | 81 | 190 | 109 | 216 | 1.18e-11 | 66.6 |
| MsG0280006896.01.T01 | MTR_2g093020 | 39.091 | 110 | 61 | 3 | 81 | 188 | 96 | 201 | 1.19e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006896.01.T01 | AT5G45850 | 27.838 | 370 | 171 | 15 | 112 | 414 | 94 | 434 | 4.33e-16 | 80.9 |
| MsG0280006896.01.T01 | AT2G30990 | 35.359 | 181 | 88 | 7 | 6 | 181 | 69 | 225 | 1.30e-15 | 79.7 |
| MsG0280006896.01.T01 | AT2G30990 | 35.359 | 181 | 88 | 7 | 6 | 181 | 69 | 225 | 1.30e-15 | 79.7 |
| MsG0280006896.01.T01 | AT2G30990 | 35.359 | 181 | 88 | 7 | 6 | 181 | 69 | 225 | 1.30e-15 | 79.7 |
| MsG0280006896.01.T01 | AT2G30990 | 35.359 | 181 | 88 | 7 | 6 | 181 | 69 | 225 | 1.30e-15 | 79.7 |
| MsG0280006896.01.T01 | AT1G29240 | 31.925 | 213 | 89 | 9 | 6 | 211 | 69 | 232 | 6.96e-15 | 77.4 |
Find 85 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATTCAGAAGGCGATTT+TGG | 0.175148 | 2:-7732049 | None:intergenic |
| TATGAATCCAACCTTTCTTT+AGG | 0.214591 | 2:-7732555 | None:intergenic |
| TTGCTTCATCTTCATATCTT+TGG | 0.238575 | 2:-7731895 | None:intergenic |
| GGTATGAATTTCCTAGCTTA+TGG | 0.241349 | 2:+7732459 | MsG0280006896.01.T01:CDS |
| ATGAATCCAACCTTTCTTTA+GGG | 0.267422 | 2:-7732554 | None:intergenic |
| GGCAATTCTACAACTTTATC+TGG | 0.287056 | 2:+7731855 | MsG0280006896.01.T01:CDS |
| ATCTATTCTAACCGCGTTGC+CGG | 0.290201 | 2:-7730212 | None:intergenic |
| AGATCTAATACTAGATCTTT+TGG | 0.293809 | 2:-7730832 | None:intergenic |
| CGCCTTCTGAATCTTGGCTT+TGG | 0.295509 | 2:+7732056 | MsG0280006896.01.T01:CDS |
| GTGACTTTACTAGCATGTTT+TGG | 0.301554 | 2:+7732396 | MsG0280006896.01.T01:CDS |
| TTCTTTCCTTCTTGTGTCTC+AGG | 0.305257 | 2:-7731327 | None:intergenic |
| CAAAATCGCCTTCTGAATCT+TGG | 0.309915 | 2:+7732050 | MsG0280006896.01.T01:CDS |
| CTATTACCTTTACATCTTCC+AGG | 0.316758 | 2:-7730031 | None:intergenic |
| GTCGTCGTTACCCCTGTGGC+TGG | 0.327433 | 2:+7730750 | MsG0280006896.01.T01:CDS |
| AATGCATGAAAGAATTCTTA+AGG | 0.332402 | 2:-7732099 | None:intergenic |
| TAACACAATTTGCTTCTTGT+TGG | 0.338151 | 2:-7731996 | None:intergenic |
| GTGAATGAAGGGTGCTTAAC+AGG | 0.338479 | 2:-7730076 | None:intergenic |
| AACTTGGAAGCTAAGAAGTT+TGG | 0.342081 | 2:+7730412 | MsG0280006896.01.T01:CDS |
| ACCTTCTTTACAGCTGGAAT+TGG | 0.356365 | 2:-7730861 | None:intergenic |
| GAGTAGAAGGTCTTGTGTTA+AGG | 0.358792 | 2:+7730282 | MsG0280006896.01.T01:CDS |
| GAATTCTTAAGGGAATTTAT+AGG | 0.365661 | 2:-7732088 | None:intergenic |
| AAGCAAATTGTGTTAGCTAA+TGG | 0.371518 | 2:+7732004 | MsG0280006896.01.T01:CDS |
| CCAGGAGGAAGCCTAGGAAT+TGG | 0.400075 | 2:-7730100 | None:intergenic |
| AAAAGCTGATTCCTCAAGAT+TGG | 0.404973 | 2:-7732588 | None:intergenic |
| AGAAGAAAATTGAGAGTAGA+AGG | 0.408210 | 2:+7730269 | MsG0280006896.01.T01:CDS |
| AATTGAAAAGGCACTGCAAC+AGG | 0.415116 | 2:-7729997 | None:intergenic |
| TCTTTCATGCATTCAAATCA+AGG | 0.415349 | 2:+7732109 | MsG0280006896.01.T01:CDS |
| CAGAAGAAGGCAAGGTAACT+TGG | 0.421503 | 2:-7730788 | None:intergenic |
| ATGCATGAAAGAATTCTTAA+GGG | 0.429740 | 2:-7732098 | None:intergenic |
| CTTCATTATGAGTATCGAAA+AGG | 0.435326 | 2:-7732670 | None:intergenic |
| CTTCATTCACTCCAATTCCT+AGG | 0.436745 | 2:+7730089 | MsG0280006896.01.T01:CDS |
| CATCTTTCATCCCTAAAGAA+AGG | 0.455311 | 2:+7732544 | MsG0280006896.01.T01:three_prime_UTR |
| GGAAGATGTAAAGGTAATAG+TGG | 0.463837 | 2:+7730034 | MsG0280006896.01.T01:CDS |
| CTTGCCTTCTTCTGCTTCTG+AGG | 0.469469 | 2:+7730797 | MsG0280006896.01.T01:CDS |
| TTTCATCCCTAAAGAAAGGT+TGG | 0.469752 | 2:+7732548 | MsG0280006896.01.T01:three_prime_UTR |
| TTGTGATAGAGAAAGAGAAA+AGG | 0.473028 | 2:+7730234 | MsG0280006896.01.T01:CDS |
| TTCAATTGGGAGCATATACC+TGG | 0.475650 | 2:+7730013 | MsG0280006896.01.T01:CDS |
| GGTAAACCTTGTACAACATC+AGG | 0.481724 | 2:+7732757 | MsG0280006896.01.T01:three_prime_UTR |
| TCCAATTCCAGCTGTAAAGA+AGG | 0.488744 | 2:+7730860 | MsG0280006896.01.T01:CDS |
| TGTAAGTGGATTAGATAACT+TGG | 0.489622 | 2:+7730396 | MsG0280006896.01.T01:CDS |
| TTCATTATGAGTATCGAAAA+GGG | 0.489774 | 2:-7732669 | None:intergenic |
| TGTAGTGTGAGTGGTGTAAG+TGG | 0.490003 | 2:+7730382 | MsG0280006896.01.T01:CDS |
| GATGGAGCAGTGAATCAAAC+AGG | 0.494290 | 2:+7731352 | MsG0280006896.01.T01:CDS |
| CTTTCATGCATTCAAATCAA+GGG | 0.495053 | 2:+7732110 | MsG0280006896.01.T01:CDS |
| GAAATATGAAATTCTCATGT+TGG | 0.496138 | 2:+7732736 | MsG0280006896.01.T01:three_prime_UTR |
| AGTGAATCTATTTGCAACGT+TGG | 0.501107 | 2:-7730164 | None:intergenic |
| AGGCTTGGGAAGCAATTCAT+AGG | 0.501472 | 2:+7731277 | MsG0280006896.01.T01:intron |
| TGCCACACAGCCATTGGTAA+AGG | 0.501688 | 2:+7730138 | MsG0280006896.01.T01:CDS |
| ATTAGTCCTGATGTTGTACA+AGG | 0.505244 | 2:-7732763 | None:intergenic |
| CTAGGAATTGGAGTGAATGA+AGG | 0.509197 | 2:-7730088 | None:intergenic |
| AACAAATCTAAGTCTTTCAC+CGG | 0.510412 | 2:+7730193 | MsG0280006896.01.T01:CDS |
| TCTTAAGGGAATTTATAGGC+AGG | 0.510829 | 2:-7732084 | None:intergenic |
| CATATACCTGGAAGATGTAA+AGG | 0.513574 | 2:+7730025 | MsG0280006896.01.T01:CDS |
| CCAATTCCTAGGCTTCCTCC+TGG | 0.515401 | 2:+7730100 | MsG0280006896.01.T01:CDS |
| CAAATCTGCCACACAGCCAT+TGG | 0.523138 | 2:+7730132 | MsG0280006896.01.T01:CDS |
| TGGTCATGTTCGCTATTCTC+AGG | 0.524240 | 2:+7732222 | MsG0280006896.01.T01:CDS |
| CACAAGAAGGAAAGAAGAGA+TGG | 0.527187 | 2:+7731334 | MsG0280006896.01.T01:CDS |
| GTATATGCTCCCAATTGAAA+AGG | 0.537762 | 2:-7730009 | None:intergenic |
| GTTGCACTGACACGAGTTCA+CGG | 0.542673 | 2:-7731940 | None:intergenic |
| ACCTAGAGATGTTAACAAGT+TGG | 0.543738 | 2:+7730561 | MsG0280006896.01.T01:CDS |
| AAAAGGAAATTCCATAAGCT+AGG | 0.549681 | 2:-7732470 | None:intergenic |
| TGCTGTTCCACTAATACAGA+TGG | 0.550161 | 2:-7730538 | None:intergenic |
| TTTGGCAATGGTGGTTGAAG+TGG | 0.552216 | 2:-7732031 | None:intergenic |
| CTCAGAAGCAGAAGAAGGCA+AGG | 0.554216 | 2:-7730796 | None:intergenic |
| ACGTTGGATTCCTTTACCAA+TGG | 0.557062 | 2:-7730148 | None:intergenic |
| ACAACCTCAGAAGCAGAAGA+AGG | 0.563800 | 2:-7730801 | None:intergenic |
| GGGTGCTTAACAGGAATTTG+AGG | 0.564398 | 2:-7730067 | None:intergenic |
| CTTAAGGGAATTTATAGGCA+GGG | 0.568652 | 2:-7732083 | None:intergenic |
| ACCAACTTGTTAACATCTCT+AGG | 0.572917 | 2:-7730562 | None:intergenic |
| TCGTCGTTACCCCTGTGGCT+GGG | 0.574760 | 2:+7730751 | MsG0280006896.01.T01:CDS |
| ATTAATATCATCCAATCTTG+AGG | 0.575175 | 2:+7732577 | MsG0280006896.01.T01:three_prime_UTR |
| TCATAGGAACAAGTCAAGTA+CGG | 0.579635 | 2:+7731293 | MsG0280006896.01.T01:CDS |
| TTCATGCAGGAACTACAGGC+TGG | 0.582455 | 2:+7732338 | MsG0280006896.01.T01:intron |
| AAAACTTCAAATTTGCAGCA+TGG | 0.585819 | 2:+7732202 | MsG0280006896.01.T01:CDS |
| TCAGAATGCAAAGAAGCCAT+TGG | 0.587399 | 2:+7730585 | MsG0280006896.01.T01:CDS |
| TCTTTGAACTGTAGTGTGAG+TGG | 0.589323 | 2:+7730373 | MsG0280006896.01.T01:CDS |
| ATCATCAAGCAATGTCAAGT+GGG | 0.592931 | 2:+7732168 | MsG0280006896.01.T01:CDS |
| TATCATCAAGCAATGTCAAG+TGG | 0.593140 | 2:+7732167 | MsG0280006896.01.T01:CDS |
| GGAAATTCATACCATATGCA+TGG | 0.594826 | 2:-7732449 | None:intergenic |
| CATTGTCGTCGTTACCCCTG+TGG | 0.598858 | 2:+7730746 | MsG0280006896.01.T01:CDS |
| TAGGAATTGGAGTGAATGAA+GGG | 0.609667 | 2:-7730087 | None:intergenic |
| CGCCAAAGCCAAGATTCAGA+AGG | 0.617248 | 2:-7732058 | None:intergenic |
| TTCCTTTACCAATGGCTGTG+TGG | 0.635764 | 2:-7730140 | None:intergenic |
| GCATCACCTGAGACACAAGA+AGG | 0.635937 | 2:+7731321 | MsG0280006896.01.T01:CDS |
| TAAGTCTTTCACCGGCAACG+CGG | 0.704050 | 2:+7730201 | MsG0280006896.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGAAATATTAAGTTCTTT+AGG | + | Chr2:7731831-7731850 | MsG0280006896.01.T01:intron | 15.0% |
| !!! | ATTTTTACCAATGCTATAAA+AGG | - | Chr2:7732490-7732509 | None:intergenic | 20.0% |
| !!! | TTTTACCTAATTTACATGTT+AGG | + | Chr2:7730719-7730738 | MsG0280006896.01.T01:intron | 20.0% |
| !!! | TTTTTTGAAGAATATTGAGA+AGG | - | Chr2:7730517-7730536 | None:intergenic | 20.0% |
| ! | AATGCATGAAAGAATTCTTA+AGG | - | Chr2:7732102-7732121 | None:intergenic | 25.0% |
| ! | ATGCATGAAAGAATTCTTAA+GGG | - | Chr2:7732101-7732120 | None:intergenic | 25.0% |
| ! | ATTAATATCATCCAATCTTG+AGG | + | Chr2:7732577-7732596 | MsG0280006896.01.T01:three_prime_UTR | 25.0% |
| ! | GAAATATGAAATTCTCATGT+TGG | + | Chr2:7732736-7732755 | MsG0280006896.01.T01:three_prime_UTR | 25.0% |
| ! | GAAATATTAAGTTCTTTAGG+TGG | + | Chr2:7731834-7731853 | MsG0280006896.01.T01:intron | 25.0% |
| ! | GAATTCCTAACATGTAAATT+AGG | - | Chr2:7730727-7730746 | None:intergenic | 25.0% |
| ! | GAATTCTTAAGGGAATTTAT+AGG | - | Chr2:7732091-7732110 | None:intergenic | 25.0% |
| ! | GTCTTATATAGGCAAAATTA+TGG | - | Chr2:7732269-7732288 | None:intergenic | 25.0% |
| ! | TAAGATAGAATCAATTCTGA+AGG | - | Chr2:7731000-7731019 | None:intergenic | 25.0% |
| ! | TATGGACAAAGGAATTAAAA+AGG | - | Chr2:7732251-7732270 | None:intergenic | 25.0% |
| ! | TGATCAACAAAAAAGGATTA+AGG | - | Chr2:7731194-7731213 | None:intergenic | 25.0% |
| !! | AAAAGGATTAAGGATTTGTT+TGG | - | Chr2:7731184-7731203 | None:intergenic | 25.0% |
| !! | AAAGGATTAAGGATTTGTTT+GGG | - | Chr2:7731183-7731202 | None:intergenic | 25.0% |
| !! | AGATCTAATACTAGATCTTT+TGG | - | Chr2:7730835-7730854 | None:intergenic | 25.0% |
| !!! | AAAATCTACTTTTGTCACAA+CGG | + | Chr2:7731156-7731175 | MsG0280006896.01.T01:intron | 25.0% |
| !!! | ACAATTGATTTTGACATGTT+TGG | + | Chr2:7730950-7730969 | MsG0280006896.01.T01:intron | 25.0% |
| !!! | TTCATTATGAGTATCGAAAA+GGG | - | Chr2:7732672-7732691 | None:intergenic | 25.0% |
| AAAAAAGCCATCTGTATTAG+TGG | + | Chr2:7730531-7730550 | MsG0280006896.01.T01:CDS | 30.0% | |
| AAAACTTCAAATTTGCAGCA+TGG | + | Chr2:7732202-7732221 | MsG0280006896.01.T01:CDS | 30.0% | |
| AAAAGGAAATTCCATAAGCT+AGG | - | Chr2:7732473-7732492 | None:intergenic | 30.0% | |
| AAACAAGGAGACAAAAAACT+TGG | - | Chr2:7732423-7732442 | None:intergenic | 30.0% | |
| AAAGCTAGAATTTGTAGCTT+TGG | + | Chr2:7731019-7731038 | MsG0280006896.01.T01:intron | 30.0% | |
| AACAAATCTAAGTCTTTCAC+CGG | + | Chr2:7730193-7730212 | MsG0280006896.01.T01:CDS | 30.0% | |
| AAGCAAATTGTGTTAGCTAA+TGG | + | Chr2:7732004-7732023 | MsG0280006896.01.T01:CDS | 30.0% | |
| AAGTTCATATTCAGGAAGTT+TGG | + | Chr2:7731601-7731620 | MsG0280006896.01.T01:intron | 30.0% | |
| AATGTAAAGTGATGTACGTT+TGG | - | Chr2:7731106-7731125 | None:intergenic | 30.0% | |
| ACCATAAGAAGTTCATATTC+AGG | + | Chr2:7731593-7731612 | MsG0280006896.01.T01:intron | 30.0% | |
| ACTGATATTATACCGTATAC+CGG | + | Chr2:7730610-7730629 | MsG0280006896.01.T01:intron | 30.0% | |
| AGAAGAAAATTGAGAGTAGA+AGG | + | Chr2:7730269-7730288 | MsG0280006896.01.T01:CDS | 30.0% | |
| AGGATGTTGATCAACAAAAA+AGG | - | Chr2:7731201-7731220 | None:intergenic | 30.0% | |
| AGTTCTGTAGATATCAAAAG+AGG | + | Chr2:7731686-7731705 | MsG0280006896.01.T01:intron | 30.0% | |
| ATAGGCAAAATTATGGACAA+AGG | - | Chr2:7732262-7732281 | None:intergenic | 30.0% | |
| ATGAATCCAACCTTTCTTTA+GGG | - | Chr2:7732557-7732576 | None:intergenic | 30.0% | |
| ATGAGCCAAAAATTGTTACA+AGG | + | Chr2:7730923-7730942 | MsG0280006896.01.T01:intron | 30.0% | |
| ATTTGGAAGAAAAGTCACAT+TGG | + | Chr2:7731806-7731825 | MsG0280006896.01.T01:intron | 30.0% | |
| CATAAAACATGTTGAAGCTT+TGG | + | Chr2:7731783-7731802 | MsG0280006896.01.T01:intron | 30.0% | |
| CTTCAAATTGCAAGGTTTAT+TGG | - | Chr2:7731526-7731545 | None:intergenic | 30.0% | |
| CTTTCATGCATTCAAATCAA+GGG | + | Chr2:7732110-7732129 | MsG0280006896.01.T01:CDS | 30.0% | |
| GGTATAATATCAGTTACCAA+TGG | - | Chr2:7730604-7730623 | None:intergenic | 30.0% | |
| TATGAATCCAACCTTTCTTT+AGG | - | Chr2:7732558-7732577 | None:intergenic | 30.0% | |
| TATGCATGGTGAAAAAAACA+AGG | - | Chr2:7732438-7732457 | None:intergenic | 30.0% | |
| TCCTGAATATGAACTTCTTA+TGG | - | Chr2:7731597-7731616 | None:intergenic | 30.0% | |
| TCTTTCATGCATTCAAATCA+AGG | + | Chr2:7732109-7732128 | MsG0280006896.01.T01:CDS | 30.0% | |
| TGAGCCAAAAATTGTTACAA+GGG | + | Chr2:7730924-7730943 | MsG0280006896.01.T01:intron | 30.0% | |
| TTGCTTCATCTTCATATCTT+TGG | - | Chr2:7731898-7731917 | None:intergenic | 30.0% | |
| TTGGATACTTTCATGTAAAG+TGG | - | Chr2:7731087-7731106 | None:intergenic | 30.0% | |
| TTGTGATAGAGAAAGAGAAA+AGG | + | Chr2:7730234-7730253 | MsG0280006896.01.T01:CDS | 30.0% | |
| ! | AAGGATTAAGGATTTGTTTG+GGG | - | Chr2:7731182-7731201 | None:intergenic | 30.0% |
| ! | CTAATACTAGATCTTTTGGT+AGG | - | Chr2:7730831-7730850 | None:intergenic | 30.0% |
| ! | CTTTTCGATACTCATAATGA+AGG | + | Chr2:7732671-7732690 | MsG0280006896.01.T01:three_prime_UTR | 30.0% |
| ! | GATAATTCTGATAGTGTCTT+GGG | + | Chr2:7730683-7730702 | MsG0280006896.01.T01:intron | 30.0% |
| ! | GGAATTTCCTTTTATAGCAT+TGG | + | Chr2:7732480-7732499 | MsG0280006896.01.T01:exon | 30.0% |
| ! | TAACACAATTTGCTTCTTGT+TGG | - | Chr2:7731999-7732018 | None:intergenic | 30.0% |
| ! | TACACCCTTGTAACAATTTT+TGG | - | Chr2:7730931-7730950 | None:intergenic | 30.0% |
| ! | TGATAATTCTGATAGTGTCT+TGG | + | Chr2:7730682-7730701 | MsG0280006896.01.T01:intron | 30.0% |
| ! | TTGTATTGTCATAGCTTTTG+CGG | - | Chr2:7730494-7730513 | None:intergenic | 30.0% |
| !! | CTTCATTATGAGTATCGAAA+AGG | - | Chr2:7732673-7732692 | None:intergenic | 30.0% |
| !! | GAGTTGATGTAGTCTTATAT+AGG | - | Chr2:7732280-7732299 | None:intergenic | 30.0% |
| !! | TGTAAGTGGATTAGATAACT+TGG | + | Chr2:7730396-7730415 | MsG0280006896.01.T01:CDS | 30.0% |
| !! | TTCACATTTACTTTTCATGC+AGG | + | Chr2:7732325-7732344 | MsG0280006896.01.T01:intron | 30.0% |
| !!! | TGTTTTTTTCACCATGCATA+TGG | + | Chr2:7732438-7732457 | MsG0280006896.01.T01:CDS | 30.0% |
| !!! | TTTTTTACCTTCTTTACAGC+TGG | - | Chr2:7730870-7730889 | None:intergenic | 30.0% |
| AACTTGGAAGCTAAGAAGTT+TGG | + | Chr2:7730412-7730431 | MsG0280006896.01.T01:CDS | 35.0% | |
| ACCTAGAGATGTTAACAAGT+TGG | + | Chr2:7730561-7730580 | MsG0280006896.01.T01:CDS | 35.0% | |
| AGAAACTATGACTGCAGAAT+TGG | + | Chr2:7731711-7731730 | MsG0280006896.01.T01:intron | 35.0% | |
| AGACTACATCAACTCAACTA+TGG | + | Chr2:7732285-7732304 | MsG0280006896.01.T01:intron | 35.0% | |
| AGATTGTTGTCTACTTCTAC+AGG | - | Chr2:7731457-7731476 | None:intergenic | 35.0% | |
| AGTGAATCTATTTGCAACGT+TGG | - | Chr2:7730167-7730186 | None:intergenic | 35.0% | |
| ATATTCAGGAAGTTTGGCAA+TGG | + | Chr2:7731607-7731626 | MsG0280006896.01.T01:intron | 35.0% | |
| ATCATCAAGCAATGTCAAGT+GGG | + | Chr2:7732168-7732187 | MsG0280006896.01.T01:CDS | 35.0% | |
| ATGAACTTCTTATGGTTCCT+TGG | - | Chr2:7731589-7731608 | None:intergenic | 35.0% | |
| ATTAGTCCTGATGTTGTACA+AGG | - | Chr2:7732766-7732785 | None:intergenic | 35.0% | |
| CAGAATTGGACAAAAGAAGA+GGG | + | Chr2:7731725-7731744 | MsG0280006896.01.T01:intron | 35.0% | |
| CATATACCTGGAAGATGTAA+AGG | + | Chr2:7730025-7730044 | MsG0280006896.01.T01:CDS | 35.0% | |
| CATCTTTCATCCCTAAAGAA+AGG | + | Chr2:7732544-7732563 | MsG0280006896.01.T01:three_prime_UTR | 35.0% | |
| CATGTTTGGATATTCTCAGT+AGG | + | Chr2:7730964-7730983 | MsG0280006896.01.T01:intron | 35.0% | |
| CGAAAACATGTTCATTCATG+AGG | - | Chr2:7731221-7731240 | None:intergenic | 35.0% | |
| CTATTACCTTTACATCTTCC+AGG | - | Chr2:7730034-7730053 | None:intergenic | 35.0% | |
| CTGATATTATACCGTATACC+GGG | + | Chr2:7730611-7730630 | MsG0280006896.01.T01:intron | 35.0% | |
| CTTAAGGGAATTTATAGGCA+GGG | - | Chr2:7732086-7732105 | None:intergenic | 35.0% | |
| GATTGTTGTCTACTTCTACA+GGG | - | Chr2:7731456-7731475 | None:intergenic | 35.0% | |
| GGAAATTCATACCATATGCA+TGG | - | Chr2:7732452-7732471 | None:intergenic | 35.0% | |
| GGAAGATGTAAAGGTAATAG+TGG | + | Chr2:7730034-7730053 | MsG0280006896.01.T01:CDS | 35.0% | |
| GGCAATTCTACAACTTTATC+TGG | + | Chr2:7731855-7731874 | MsG0280006896.01.T01:CDS | 35.0% | |
| GGTATGAATTTCCTAGCTTA+TGG | + | Chr2:7732459-7732478 | MsG0280006896.01.T01:CDS | 35.0% | |
| GTATATGCTCCCAATTGAAA+AGG | - | Chr2:7730012-7730031 | None:intergenic | 35.0% | |
| TAGGAATTGGAGTGAATGAA+GGG | - | Chr2:7730090-7730109 | None:intergenic | 35.0% | |
| TATCATCAAGCAATGTCAAG+TGG | + | Chr2:7732167-7732186 | MsG0280006896.01.T01:CDS | 35.0% | |
| TCATAGGAACAAGTCAAGTA+CGG | + | Chr2:7731293-7731312 | MsG0280006896.01.T01:CDS | 35.0% | |
| TCTTAAGGGAATTTATAGGC+AGG | - | Chr2:7732087-7732106 | None:intergenic | 35.0% | |
| TTTCATCCCTAAAGAAAGGT+TGG | + | Chr2:7732548-7732567 | MsG0280006896.01.T01:three_prime_UTR | 35.0% | |
| ! | AAAAGCTGATTCCTCAAGAT+TGG | - | Chr2:7732591-7732610 | None:intergenic | 35.0% |
| ! | GTGACTTTACTAGCATGTTT+TGG | + | Chr2:7732396-7732415 | MsG0280006896.01.T01:CDS | 35.0% |
| ! | TCAAACAGGTTTGCTTATTC+AGG | + | Chr2:7731366-7731385 | MsG0280006896.01.T01:intron | 35.0% |
| ! | TCAGAAAAAGTCTTTTGCAC+TGG | - | Chr2:7731965-7731984 | None:intergenic | 35.0% |
| ! | TGATGATGAATCTTTGATGC+AGG | + | Chr2:7731257-7731276 | MsG0280006896.01.T01:intron | 35.0% |
| ! | TGTATGTTTGATTTCGCATG+TGG | + | Chr2:7730900-7730919 | MsG0280006896.01.T01:intron | 35.0% |
| !! | ACATGTTGAAGCTTTGGATT+TGG | + | Chr2:7731789-7731808 | MsG0280006896.01.T01:intron | 35.0% |
| !! | ACCAACTTGTTAACATCTCT+AGG | - | Chr2:7730565-7730584 | None:intergenic | 35.0% |
| AATCAAGGAGTTCCAAACCA+AGG | + | Chr2:7731569-7731588 | MsG0280006896.01.T01:intron | 40.0% | |
| ACCTTCTTTACAGCTGGAAT+TGG | - | Chr2:7730864-7730883 | None:intergenic | 40.0% | |
| ACGTTGGATTCCTTTACCAA+TGG | - | Chr2:7730151-7730170 | None:intergenic | 40.0% | |
| ACTTCTACAGGGAGATATAC+CGG | - | Chr2:7731445-7731464 | None:intergenic | 40.0% | |
| ATGAATCTTTGATGCAGGCT+TGG | + | Chr2:7731262-7731281 | MsG0280006896.01.T01:intron | 40.0% | |
| CAAAATCGCCTTCTGAATCT+TGG | + | Chr2:7732050-7732069 | MsG0280006896.01.T01:CDS | 40.0% | |
| CACAAGAAGGAAAGAAGAGA+TGG | + | Chr2:7731334-7731353 | MsG0280006896.01.T01:CDS | 40.0% | |
| CTAGGAATTGGAGTGAATGA+AGG | - | Chr2:7730091-7730110 | None:intergenic | 40.0% | |
| CTCAGGACTTGGAAAAATCA+AGG | + | Chr2:7731554-7731573 | MsG0280006896.01.T01:intron | 40.0% | |
| CTGTGGAACTTCAAATTGCA+AGG | - | Chr2:7731534-7731553 | None:intergenic | 40.0% | |
| CTTCATTCACTCCAATTCCT+AGG | + | Chr2:7730089-7730108 | MsG0280006896.01.T01:CDS | 40.0% | |
| CTTCTTATGGTTCCTTGGTT+TGG | - | Chr2:7731584-7731603 | None:intergenic | 40.0% | |
| GAGGAAGAAAGTGAAGATGA+AGG | + | Chr2:7730644-7730663 | MsG0280006896.01.T01:intron | 40.0% | |
| GCAGAATTGGACAAAAGAAG+AGG | + | Chr2:7731724-7731743 | MsG0280006896.01.T01:intron | 40.0% | |
| GGTAAACCTTGTACAACATC+AGG | + | Chr2:7732757-7732776 | MsG0280006896.01.T01:three_prime_UTR | 40.0% | |
| TCAGAATGCAAAGAAGCCAT+TGG | + | Chr2:7730585-7730604 | MsG0280006896.01.T01:CDS | 40.0% | |
| TCCAATTCCAGCTGTAAAGA+AGG | + | Chr2:7730860-7730879 | MsG0280006896.01.T01:CDS | 40.0% | |
| TCTTTGAACTGTAGTGTGAG+TGG | + | Chr2:7730373-7730392 | MsG0280006896.01.T01:CDS | 40.0% | |
| TGAATCTTTGATGCAGGCTT+GGG | + | Chr2:7731263-7731282 | MsG0280006896.01.T01:intron | 40.0% | |
| TGCTGTTCCACTAATACAGA+TGG | - | Chr2:7730541-7730560 | None:intergenic | 40.0% | |
| TTCTTTCCTTCTTGTGTCTC+AGG | - | Chr2:7731330-7731349 | None:intergenic | 40.0% | |
| ! | AATTTGAAGTTCCACAGCTC+AGG | + | Chr2:7731537-7731556 | MsG0280006896.01.T01:intron | 40.0% |
| ! | ACTTTTCATGCAGGAACTAC+AGG | + | Chr2:7732334-7732353 | MsG0280006896.01.T01:intron | 40.0% |
| ! | CAAGATTCAGAAGGCGATTT+TGG | - | Chr2:7732052-7732071 | None:intergenic | 40.0% |
| ! | GAGTAGAAGGTCTTGTGTTA+AGG | + | Chr2:7730282-7730301 | MsG0280006896.01.T01:CDS | 40.0% |
| ! | GTTGCAGTGCCTTTTCAATT+GGG | + | Chr2:7730000-7730019 | MsG0280006896.01.T01:CDS | 40.0% |
| ! | TGTTGCAGTGCCTTTTCAAT+TGG | + | Chr2:7729999-7730018 | MsG0280006896.01.T01:CDS | 40.0% |
| ! | TTCAATTGGGAGCATATACC+TGG | + | Chr2:7730013-7730032 | MsG0280006896.01.T01:CDS | 40.0% |
| ! | TTCTGATAGTGTCTTGGGTA+AGG | + | Chr2:7730688-7730707 | MsG0280006896.01.T01:intron | 40.0% |
| !! | GATTTGACTGATTTTCCAGG+AGG | - | Chr2:7730118-7730137 | None:intergenic | 40.0% |
| !! | GCAGATTTGACTGATTTTCC+AGG | - | Chr2:7730121-7730140 | None:intergenic | 40.0% |
| ACAACCTCAGAAGCAGAAGA+AGG | - | Chr2:7730804-7730823 | None:intergenic | 45.0% | |
| AGACAACAATCTCCCTTTCG+TGG | + | Chr2:7731465-7731484 | MsG0280006896.01.T01:intron | 45.0% | |
| AGCAACTTTGTGCCACGAAA+GGG | - | Chr2:7731480-7731499 | None:intergenic | 45.0% | |
| AGGCTTGGGAAGCAATTCAT+AGG | + | Chr2:7731277-7731296 | MsG0280006896.01.T01:intron | 45.0% | |
| ATCTATTCTAACCGCGTTGC+CGG | - | Chr2:7730215-7730234 | None:intergenic | 45.0% | |
| CAGAAGAAGGCAAGGTAACT+TGG | - | Chr2:7730791-7730810 | None:intergenic | 45.0% | |
| CTTGACATTCACCCGGTATA+CGG | - | Chr2:7730625-7730644 | None:intergenic | 45.0% | |
| GATGGAGCAGTGAATCAAAC+AGG | + | Chr2:7731352-7731371 | MsG0280006896.01.T01:CDS | 45.0% | |
| GGGTGCTTAACAGGAATTTG+AGG | - | Chr2:7730070-7730089 | None:intergenic | 45.0% | |
| TAGTGTCTTGGGTAAGGATG+TGG | + | Chr2:7730694-7730713 | MsG0280006896.01.T01:intron | 45.0% | |
| TATACCGGGTGAATGTCAAG+AGG | + | Chr2:7730625-7730644 | MsG0280006896.01.T01:intron | 45.0% | |
| TATTCAGGTGAGTTGCTTCC+AGG | + | Chr2:7731381-7731400 | MsG0280006896.01.T01:intron | 45.0% | |
| TCTTCCTCTTGACATTCACC+CGG | - | Chr2:7730632-7730651 | None:intergenic | 45.0% | |
| TGGTCATGTTCGCTATTCTC+AGG | + | Chr2:7732222-7732241 | MsG0280006896.01.T01:CDS | 45.0% | |
| TGTAGTGTGAGTGGTGTAAG+TGG | + | Chr2:7730382-7730401 | MsG0280006896.01.T01:CDS | 45.0% | |
| TTCCTTTACCAATGGCTGTG+TGG | - | Chr2:7730143-7730162 | None:intergenic | 45.0% | |
| TTTCGTGGCACAAAGTTGCT+CGG | + | Chr2:7731480-7731499 | MsG0280006896.01.T01:intron | 45.0% | |
| TTTGGCAATGGTGGTTGAAG+TGG | - | Chr2:7732034-7732053 | None:intergenic | 45.0% | |
| ! | ATTGTCATAGCTTTTGCGGC+TGG | - | Chr2:7730490-7730509 | None:intergenic | 45.0% |
| ! | TCATTTTCATCCCAGCCACA+GGG | - | Chr2:7730764-7730783 | None:intergenic | 45.0% |
| ! | TTCATTTTCATCCCAGCCAC+AGG | - | Chr2:7730765-7730784 | None:intergenic | 45.0% |
| ! | TTTTTCCAAGTCCTGAGCTG+TGG | - | Chr2:7731551-7731570 | None:intergenic | 45.0% |
| !! | GTGAATGAAGGGTGCTTAAC+AGG | - | Chr2:7730079-7730098 | None:intergenic | 45.0% |
| !! | TCAGAAGGCGATTTTGGCAA+TGG | - | Chr2:7732046-7732065 | None:intergenic | 45.0% |
| !! | TTGAAAAGGCACTGCAACAG+TGG | - | Chr2:7729998-7730017 | None:intergenic | 45.0% |
| AAGTTCCACAGCTCAGGACT+TGG | + | Chr2:7731543-7731562 | MsG0280006896.01.T01:intron | 50.0% | |
| CAAATCTGCCACACAGCCAT+TGG | + | Chr2:7730132-7730151 | MsG0280006896.01.T01:CDS | 50.0% | |
| CGCCAAAGCCAAGATTCAGA+AGG | - | Chr2:7732061-7732080 | None:intergenic | 50.0% | |
| CGCCTTCTGAATCTTGGCTT+TGG | + | Chr2:7732056-7732075 | MsG0280006896.01.T01:CDS | 50.0% | |
| CTCAGAAGCAGAAGAAGGCA+AGG | - | Chr2:7730799-7730818 | None:intergenic | 50.0% | |
| CTTGCCTTCTTCTGCTTCTG+AGG | + | Chr2:7730797-7730816 | MsG0280006896.01.T01:CDS | 50.0% | |
| GAGCAACTTTGTGCCACGAA+AGG | - | Chr2:7731481-7731500 | None:intergenic | 50.0% | |
| GCATCACCTGAGACACAAGA+AGG | + | Chr2:7731321-7731340 | MsG0280006896.01.T01:CDS | 50.0% | |
| TAAGTCTTTCACCGGCAACG+CGG | + | Chr2:7730201-7730220 | MsG0280006896.01.T01:CDS | 50.0% | |
| TGCCACACAGCCATTGGTAA+AGG | + | Chr2:7730138-7730157 | MsG0280006896.01.T01:CDS | 50.0% | |
| TTCATGCAGGAACTACAGGC+TGG | + | Chr2:7732338-7732357 | MsG0280006896.01.T01:intron | 50.0% | |
| ! | CATTTTCATCCCAGCCACAG+GGG | - | Chr2:7730763-7730782 | None:intergenic | 50.0% |
| ! | CTTTTGCGGCTGGCAAGAAA+CGG | - | Chr2:7730480-7730499 | None:intergenic | 50.0% |
| ! | GATTTTCCAGGAGGAAGCCT+AGG | - | Chr2:7730109-7730128 | None:intergenic | 50.0% |
| ! | GTTGCACTGACACGAGTTCA+CGG | - | Chr2:7731943-7731962 | None:intergenic | 50.0% |
| !! | GAAGGCGATTTTGGCAATGG+TGG | - | Chr2:7732043-7732062 | None:intergenic | 50.0% |
| ACAGGGAGATATACCGGCAG+CGG | - | Chr2:7731439-7731458 | None:intergenic | 55.0% | |
| CAGGTAGACTCTCTCCCTTC+CGG | + | Chr2:7731400-7731419 | MsG0280006896.01.T01:intron | 55.0% | |
| CATTGTCGTCGTTACCCCTG+TGG | + | Chr2:7730746-7730765 | MsG0280006896.01.T01:CDS | 55.0% | |
| CCAATTCCTAGGCTTCCTCC+TGG | + | Chr2:7730100-7730119 | MsG0280006896.01.T01:CDS | 55.0% | |
| CCAGGAGGAAGCCTAGGAAT+TGG | - | Chr2:7730103-7730122 | None:intergenic | 55.0% | |
| CGGAAGGGAGAGAGTCTACC+TGG | - | Chr2:7731402-7731421 | None:intergenic | 60.0% | |
| GCTGCTCTTGAACGCCGGAA+GGG | - | Chr2:7731417-7731436 | None:intergenic | 60.0% | |
| TCGTCGTTACCCCTGTGGCT+GGG | + | Chr2:7730751-7730770 | MsG0280006896.01.T01:CDS | 60.0% | |
| CAGCGGCTGCTCTTGAACGC+CGG | - | Chr2:7731422-7731441 | None:intergenic | 65.0% | |
| CGTTCAAGAGCAGCCGCTGC+CGG | + | Chr2:7731423-7731442 | MsG0280006896.01.T01:intron | 65.0% | |
| GGCTGCTCTTGAACGCCGGA+AGG | - | Chr2:7731418-7731437 | None:intergenic | 65.0% | |
| GTCGTCGTTACCCCTGTGGC+TGG | + | Chr2:7730750-7730769 | MsG0280006896.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 7729998 | 7732797 | 7729998 | ID=MsG0280006896.01;Name=MsG0280006896.01 |
| Chr2 | mRNA | 7729998 | 7732797 | 7729998 | ID=MsG0280006896.01.T01;Parent=MsG0280006896.01;Name=MsG0280006896.01.T01;_AED=0.30;_eAED=0.30;_QI=0|0.5|0.2|1|1|1|5|301|461 |
| Chr2 | exon | 7729998 | 7730606 | 7729998 | ID=MsG0280006896.01.T01:exon:2234;Parent=MsG0280006896.01.T01 |
| Chr2 | exon | 7730741 | 7730881 | 7730741 | ID=MsG0280006896.01.T01:exon:2235;Parent=MsG0280006896.01.T01 |
| Chr2 | exon | 7731279 | 7731373 | 7731279 | ID=MsG0280006896.01.T01:exon:2236;Parent=MsG0280006896.01.T01 |
| Chr2 | exon | 7731853 | 7732243 | 7731853 | ID=MsG0280006896.01.T01:exon:2237;Parent=MsG0280006896.01.T01 |
| Chr2 | exon | 7732347 | 7732797 | 7732347 | ID=MsG0280006896.01.T01:exon:2238;Parent=MsG0280006896.01.T01 |
| Chr2 | CDS | 7729998 | 7730606 | 7729998 | ID=MsG0280006896.01.T01:cds;Parent=MsG0280006896.01.T01 |
| Chr2 | CDS | 7730741 | 7730881 | 7730741 | ID=MsG0280006896.01.T01:cds;Parent=MsG0280006896.01.T01 |
| Chr2 | CDS | 7731279 | 7731373 | 7731279 | ID=MsG0280006896.01.T01:cds;Parent=MsG0280006896.01.T01 |
| Chr2 | CDS | 7731853 | 7732243 | 7731853 | ID=MsG0280006896.01.T01:cds;Parent=MsG0280006896.01.T01 |
| Chr2 | CDS | 7732347 | 7732496 | 7732347 | ID=MsG0280006896.01.T01:cds;Parent=MsG0280006896.01.T01 |
| Chr2 | three_prime_UTR | 7732497 | 7732797 | 7732497 | ID=MsG0280006896.01.T01:three_prime_utr;Parent=MsG0280006896.01.T01 |
| Gene Sequence |
| Protein sequence |
