AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000172.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000172.01.T01 MTR_1g022025 88.189 381 7 1 278 620 1 381 0.0 692
MsG0180000172.01.T01 MTR_4g069260 65.816 392 80 4 278 619 1 388 0.0 524
MsG0180000172.01.T01 MTR_4g069300 60.982 387 98 4 282 619 7 389 2.83e-162 472
MsG0180000172.01.T01 MTR_4g069430 61.214 379 94 6 282 619 7 373 4.77e-150 440
MsG0180000172.01.T01 MTR_4g069420 57.772 386 103 4 282 619 7 380 2.11e-149 439
MsG0180000172.01.T01 MTR_4g069350 57.662 385 107 5 282 619 7 382 7.27e-146 430
MsG0180000172.01.T01 MTR_4g069390 64.883 299 62 2 359 619 12 305 2.97e-134 397
MsG0180000172.01.T01 MTR_1g022030 90.686 204 15 1 1 204 129 328 4.50e-124 377
MsG0180000172.01.T01 MTR_1g022030 71.111 90 15 1 181 270 428 506 3.03e-29 122
MsG0180000172.01.T01 MTR_5g019790 55.474 137 47 4 76 204 139 269 9.98e-38 146
MsG0180000172.01.T01 MTR_5g019790 70.690 58 17 0 212 269 390 447 1.44e-16 83.2
MsG0180000172.01.T01 MTR_3g031360 30.556 180 100 7 92 249 13 189 7.80e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000172.01.T01 AT1G19360 62.176 386 97 3 278 620 1 380 1.63e-169 490
MsG0180000172.01.T01 AT1G19360 62.176 386 97 3 278 620 1 380 1.63e-169 490
MsG0180000172.01.T01 AT1G75110 59.383 389 104 4 278 620 1 381 1.77e-160 467
MsG0180000172.01.T01 AT1G75120 54.444 360 107 3 299 620 16 356 3.37e-130 389
MsG0180000172.01.T01 AT4G16580 52.147 163 72 2 43 204 127 284 1.82e-44 165
MsG0180000172.01.T01 AT4G16580 61.798 89 23 1 181 269 384 461 2.62e-23 103
MsG0180000172.01.T01 AT5G66720 50.370 135 50 2 88 222 131 248 4.96e-34 134
MsG0180000172.01.T01 AT5G66720 55.056 89 29 1 181 269 337 414 8.20e-21 95.9
MsG0180000172.01.T01 AT5G66720 51.111 135 46 2 88 222 131 245 1.01e-33 134
MsG0180000172.01.T01 AT5G66720 55.056 89 29 1 181 269 334 411 7.82e-21 95.9

Find 190 sgRNAs with CRISPR-Local

Find 634 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATTGATCGTGTCCTTTC+TGG -0.022421 1:+2349062 MsG0180000172.01.T01:five_prime_UTR
TGTCTTTGATGAACCTAAAA+TGG 0.118559 1:+2357430 MsG0180000172.01.T01:CDS
TTCAAGGCTCGGATCGATTT+AGG 0.148144 1:+2348775 MsG0180000172.01.T01:five_prime_UTR
TGGCAGATGGTGTTGGTGGC+TGG 0.185449 1:+2350718 MsG0180000172.01.T01:CDS
TGTATCAGGGCCGTCGATTC+AGG 0.192634 1:+2349028 MsG0180000172.01.T01:five_prime_UTR
AGTTGGCATATCTAATTATT+TGG 0.214194 1:+2357115 MsG0180000172.01.T01:CDS
CCACCAGTTTCTTCTTTATC+AGG 0.229621 1:-2350651 None:intergenic
TATGCCAACTTTCTTGATAT+TGG 0.231969 1:-2357102 None:intergenic
GAAATTAGGGTTTGAGTTGT+AGG 0.233441 1:-2348414 None:intergenic
AAAAGTAATTGAAGAAAATA+AGG 0.236399 1:-2348445 None:intergenic
CCCCTTTGATTATATTTATA+GGG 0.245145 1:+2357346 MsG0180000172.01.T01:CDS
ACCCCTTTGATTATATTTAT+AGG 0.264534 1:+2357345 MsG0180000172.01.T01:CDS
CATAGCAATCATACAGCTTA+TGG 0.265461 1:+2357398 MsG0180000172.01.T01:CDS
CAAAGAATTGGCTCAGTTCT+TGG 0.267377 1:+2349320 MsG0180000172.01.T01:CDS
GTTTCATATATTACTGGTTC+TGG 0.270851 1:+2353757 MsG0180000172.01.T01:CDS
GATTGCAGGAAAACTCCTTC+TGG 0.289392 1:+2350586 MsG0180000172.01.T01:intron
ATGCTCATACCATGAGAATA+TGG 0.294158 1:+2357465 MsG0180000172.01.T01:CDS
AAGCTGTTGGTTGTGGTTAT+AGG 0.297276 1:+2348368 MsG0180000172.01.T01:five_prime_UTR
GAACCTTACTGTTCATAAAA+AGG 0.300928 1:-2357673 None:intergenic
ATAAGGGTGAGAGAGAAATT+AGG 0.301136 1:-2348428 None:intergenic
TATTTAGCATGTATTGGTTC+TGG 0.307470 1:+2348685 MsG0180000172.01.T01:five_prime_UTR
GCAACCCTGTTTGTGCGTCC+TGG 0.307639 1:+2348915 MsG0180000172.01.T01:five_prime_UTR
AAACACAAGGCTGGTCCTTT+TGG 0.309663 1:+2356925 MsG0180000172.01.T01:CDS
GCAGATGTTGGTGTCAATTC+TGG 0.323413 1:+2350741 MsG0180000172.01.T01:CDS
TCAAGGCTCGGATCGATTTA+GGG 0.329994 1:+2348776 MsG0180000172.01.T01:five_prime_UTR
GGCAGATGGTGTTGGTGGCT+GGG 0.332939 1:+2350719 MsG0180000172.01.T01:CDS
CCAATTCAGTAGATGCTATT+CGG 0.336559 1:+2350787 MsG0180000172.01.T01:CDS
TAAGGGTGAGAGAGAAATTA+GGG 0.336654 1:-2348427 None:intergenic
GAAAACCTGAAGCTGGTATC+TGG 0.337306 1:+2350609 MsG0180000172.01.T01:CDS
CAACCCTGTTTGTGCGTCCT+GGG 0.337623 1:+2348916 MsG0180000172.01.T01:five_prime_UTR
AAACTCTGGACTGGAATCTA+AGG 0.342507 1:-2348943 None:intergenic
TTCAACGCATTAACTTGTTC+TGG 0.347234 1:-2356772 None:intergenic
GTGTATTTGAAGAGTGGTTT+GGG 0.349722 1:+2349211 MsG0180000172.01.T01:CDS
GTTGTAGTTTCATATATTAC+TGG 0.351541 1:+2353751 MsG0180000172.01.T01:CDS
CCGAATAGCATCTACTGAAT+TGG 0.352505 1:-2350787 None:intergenic
AGCTGGGTCAACTGAACCTT+GGG 0.353265 1:-2350816 None:intergenic
GATGCTGGATTTCGTTACTA+TGG 0.353715 1:+2353706 MsG0180000172.01.T01:CDS
CAACCCCAGGACGCACAAAC+AGG 0.357358 1:-2348920 None:intergenic
ACAATGGCTGCCCGTTTACC+TGG 0.365693 1:+2349106 MsG0180000172.01.T01:exon
AGCTCAATTGAAGGAATTGT+TGG 0.375607 1:-2357518 None:intergenic
AGCTGCATTGGCACGTCAAC+GGG 0.378440 1:+2353639 MsG0180000172.01.T01:CDS
TCAACTGCTGCTCAAGATGC+TGG 0.383804 1:+2353691 MsG0180000172.01.T01:CDS
AACCGTCAGCAGCCAGATAA+TGG 0.389477 1:+2349265 MsG0180000172.01.T01:CDS
GGTGGGAATCATGCTGTCTC+TGG 0.396405 1:+2357239 MsG0180000172.01.T01:CDS
CAACAACCATCCCAGGTAAA+CGG 0.402713 1:-2349117 None:intergenic
CAATTCAGTAGATGCTATTC+GGG 0.403313 1:+2350788 MsG0180000172.01.T01:CDS
ACATTGATCGTGTCCTTTCT+GGG 0.403437 1:+2349063 MsG0180000172.01.T01:five_prime_UTR
TTGAAGAGTGGTTTGGGGAA+TGG 0.405503 1:+2349217 MsG0180000172.01.T01:CDS
GGGAAATTGTGGTTTGGTAC+TGG 0.406055 1:+2348844 MsG0180000172.01.T01:five_prime_UTR
CCTTCACATCCTGGTTATGA+TGG 0.408046 1:+2357617 MsG0180000172.01.T01:CDS
TCCGAGATGCGGTGATTGAA+TGG 0.416396 1:-2355486 None:intergenic
CGTTTACCTGGGATGGTTGT+TGG 0.416691 1:+2349118 MsG0180000172.01.T01:CDS
TCTTGGCATTATACACAGTC+AGG 0.419386 1:+2349337 MsG0180000172.01.T01:CDS
TCTGTAATGCTGCAAAGAAT+TGG 0.419883 1:+2349308 MsG0180000172.01.T01:CDS
TGATGAACCTAAAATGGGTT+GGG 0.421735 1:+2357436 MsG0180000172.01.T01:CDS
AAGAAGAACGCCGATGAAAA+CGG 0.426281 1:-2355518 None:intergenic
TCACGGGCAGCGGTGTCAAC+GGG 0.430484 1:-2349421 None:intergenic
GATTCTGCTGAGATTCTGAT+TGG 0.432016 1:+2348817 MsG0180000172.01.T01:five_prime_UTR
TTATTGTATTTAGCATGTAT+TGG 0.435515 1:+2348679 MsG0180000172.01.T01:five_prime_UTR
TGTGTATTTGAAGAGTGGTT+TGG 0.435964 1:+2349210 MsG0180000172.01.T01:CDS
GTTGGTGGCTGGGCAGATGT+TGG 0.436846 1:+2350729 MsG0180000172.01.T01:CDS
AACAACCATCCCAGGTAAAC+GGG 0.437702 1:-2349116 None:intergenic
TCCCTATAAATATAATCAAA+GGG 0.442068 1:-2357347 None:intergenic
TAATTAATTGCAGGATTTGA+AGG 0.446483 1:+2348595 MsG0180000172.01.T01:intron
TCAACGGGCACGTCATGAGC+AGG 0.449090 1:-2349406 None:intergenic
TTGCTTCTCCTCACGGGCAG+CGG 0.450123 1:-2349431 None:intergenic
ACGAACCTTGTGACTGAGAA+TGG 0.452973 1:-2355602 None:intergenic
CATCCTGATAAAGAAGAAAC+TGG 0.454023 1:+2350648 MsG0180000172.01.T01:CDS
AACTTACAGTTCAGATGAAT+CGG 0.459438 1:-2349464 None:intergenic
ATTGGCACGTCAACGGGCTC+TGG 0.461845 1:+2353645 MsG0180000172.01.T01:CDS
CATTATACACAGTCAGGGTA+TGG 0.465846 1:+2349343 MsG0180000172.01.T01:CDS
GGTCATCAAGCTGTTGGTTG+TGG 0.467502 1:+2348361 MsG0180000172.01.T01:five_prime_UTR
AAAGTAATTGAAGAAAATAA+GGG 0.468051 1:-2348444 None:intergenic
TCAACATCGTGTAACTCTGC+TGG 0.469118 1:+2349382 MsG0180000172.01.T01:CDS
ATTGCAGGAAAACTCCTTCT+GGG 0.469361 1:+2350587 MsG0180000172.01.T01:intron
CCTGGGATGGTTGTTGGTGA+AGG 0.470886 1:+2349124 MsG0180000172.01.T01:CDS
GAATTCTGAGCTGAAGAAGC+AGG 0.473704 1:+2356822 MsG0180000172.01.T01:CDS
TCTAATGGAGAAGCTGCGTT+TGG 0.475422 1:+2356852 MsG0180000172.01.T01:CDS
GGACAAGGGAAATTGTGGTT+TGG 0.476056 1:+2348838 MsG0180000172.01.T01:five_prime_UTR
AAGAGTGGTTTGGGGAATGG+TGG 0.481077 1:+2349220 MsG0180000172.01.T01:CDS
CTCACGGGCAGCGGTGTCAA+CGG 0.481126 1:-2349422 None:intergenic
TTTAGCTACAAACTCTGGAC+TGG 0.484699 1:-2348952 None:intergenic
ATCCCTATAAATATAATCAA+AGG 0.485270 1:-2357348 None:intergenic
AATTAATTGCAGGATTTGAA+GGG 0.486176 1:+2348596 MsG0180000172.01.T01:intron
GAAGCAGGTGAAAGGTCTAA+TGG 0.486719 1:+2356837 MsG0180000172.01.T01:CDS
CGATCTAAAAGCTCAATTGA+AGG 0.489088 1:-2357527 None:intergenic
ATTGAATCAACACCTTGATC+CGG 0.489958 1:-2357206 None:intergenic
GTTGATTCAATTGCCAAGTC+GGG 0.491275 1:+2357218 MsG0180000172.01.T01:CDS
ACGGAACAGTTTGTTGTGCT+TGG 0.491386 1:+2356898 MsG0180000172.01.T01:CDS
AATGGAGAAGCTGCGTTTGG+CGG 0.496977 1:+2356855 MsG0180000172.01.T01:CDS
TTGATGAACCTAAAATGGGT+TGG 0.498626 1:+2357435 MsG0180000172.01.T01:CDS
TGCTCATACCATGAGAATAT+GGG 0.499575 1:+2357466 MsG0180000172.01.T01:CDS
TTAGGGTTTGAGTTGTAGGC+GGG 0.502424 1:-2348410 None:intergenic
ATGATCCAGATACCAGCTTC+AGG 0.504972 1:-2350614 None:intergenic
AGAATATGGGTATATAACTC+TGG 0.505845 1:+2357479 MsG0180000172.01.T01:CDS
AACGGGCTCTGGACAAAGAC+AGG 0.507075 1:+2353656 MsG0180000172.01.T01:CDS
TTGAGAGAGTTTCTGCAACT+AGG 0.508202 1:+2357278 MsG0180000172.01.T01:CDS
TTCACCAATATCAAGAAAGT+TGG 0.508424 1:+2357098 MsG0180000172.01.T01:CDS
GTTTCTTCTTTATCAGGATG+AGG 0.510151 1:-2350645 None:intergenic
GTTATATGTAGTTTGACTGT+TGG 0.510175 1:+2349608 MsG0180000172.01.T01:intron
GGCTGCCCGTTTACCTGGGA+TGG 0.510912 1:+2349111 MsG0180000172.01.T01:CDS
GGCTTTCTAAAGAGAAAGCA+TGG 0.511884 1:+2357561 MsG0180000172.01.T01:CDS
AGGTTACAGCGTTCTCCTCT+CGG 0.515400 1:+2357298 MsG0180000172.01.T01:CDS
TAGCTGCATTGGCACGTCAA+CGG 0.516599 1:+2353638 MsG0180000172.01.T01:CDS
CACCATTATCTGGCTGCTGA+CGG 0.517141 1:-2349267 None:intergenic
CAGTTGTTGATACGCTGTCT+AGG 0.517189 1:+2348988 MsG0180000172.01.T01:five_prime_UTR
AGCTCAGAAGATAGCTGCAT+TGG 0.518202 1:+2353627 MsG0180000172.01.T01:CDS
GTCTTTGATGAACCTAAAAT+GGG 0.519326 1:+2357431 MsG0180000172.01.T01:CDS
ATCTTCTGAGCTGTGACCTG+AGG 0.522667 1:-2353616 None:intergenic
TATAGAAGAGACCCGGATCA+AGG 0.525636 1:+2357194 MsG0180000172.01.T01:CDS
AAGAGCTGGCTTCAGCCCTC+AGG 0.527103 1:+2353600 MsG0180000172.01.T01:intron
AGCATGATTCCCACCCGACT+TGG 0.527468 1:-2357231 None:intergenic
GCGTTTGGCGGAGCAAGGAA+AGG 0.528394 1:+2356867 MsG0180000172.01.T01:CDS
AAGGTTCAGTTGACCCAGCT+AGG 0.530271 1:+2350819 MsG0180000172.01.T01:CDS
TCCGGGTCTCTTCTATAGAC+AGG 0.531058 1:-2357188 None:intergenic
TCTTGAGCAGCAGTTGAGAA+AGG 0.533955 1:-2353685 None:intergenic
GATTCAATTGCCAAGTCGGG+TGG 0.535736 1:+2357221 MsG0180000172.01.T01:CDS
TTTCGGTTCCGTCTGTATCA+GGG 0.536479 1:+2349015 MsG0180000172.01.T01:five_prime_UTR
AACTAAACTAAACTTCTGAC+CGG 0.537113 1:+2348340 MsG0180000172.01.T01:five_prime_UTR
TAGCTGGGTCAACTGAACCT+TGG 0.540026 1:-2350817 None:intergenic
TTGAATCAACACCTTGATCC+GGG 0.540173 1:-2357205 None:intergenic
TGATTGGACAAGGGAAATTG+TGG 0.541904 1:+2348833 MsG0180000172.01.T01:five_prime_UTR
ACTCGACTCTGAAGCGTGGT+CGG 0.546727 1:+2349158 MsG0180000172.01.T01:CDS
TGTTGATTCAATTGCCAAGT+CGG 0.547442 1:+2357217 MsG0180000172.01.T01:CDS
TGCTATTCGGGAGGAGCCCA+AGG 0.547706 1:+2350800 MsG0180000172.01.T01:CDS
AATAGTGTGTATTTGAAGAG+TGG 0.548547 1:+2349205 MsG0180000172.01.T01:CDS
CTGACCGGTCATCAAGCTGT+TGG 0.552836 1:+2348355 MsG0180000172.01.T01:five_prime_UTR
AAGCTGCGTTTGGCGGAGCA+AGG 0.554092 1:+2356862 MsG0180000172.01.T01:CDS
TCTTCTGAGCTGTGACCTGA+GGG 0.554819 1:-2353615 None:intergenic
CCATCATAACCAGGATGTGA+AGG 0.557644 1:-2357617 None:intergenic
ATTTGATAAACAGCAATGGC+AGG 0.559173 1:+2355430 MsG0180000172.01.T01:intron
AGAGCCTTGACAGTGCCAAA+AGG 0.564867 1:-2356940 None:intergenic
TGAAACTTGTCAGCCCAGAA+AGG 0.564907 1:-2349076 None:intergenic
ACCATTCAATCACCGCATCT+CGG 0.566295 1:+2355485 MsG0180000172.01.T01:CDS
GAGCTGAAGAAGCAGGTGAA+AGG 0.566632 1:+2356829 MsG0180000172.01.T01:CDS
TATTTATAGGGATTCAGATG+TGG 0.569522 1:+2357358 MsG0180000172.01.T01:CDS
CGTTGACACCGCTGCCCGTG+AGG 0.569655 1:+2349423 MsG0180000172.01.T01:CDS
CAATGGCTGCCCGTTTACCT+GGG 0.574522 1:+2349107 MsG0180000172.01.T01:exon
CTTCTGGGAAAACCTGAAGC+TGG 0.574967 1:+2350602 MsG0180000172.01.T01:CDS
CGTTTGGCGGAGCAAGGAAA+GGG 0.575655 1:+2356868 MsG0180000172.01.T01:CDS
CAAGTTTCAAATTAAAACAA+TGG 0.585777 1:+2349090 MsG0180000172.01.T01:exon
ACAACCAACAGCTTGATGAC+CGG 0.585854 1:-2348359 None:intergenic
GTTATATACCCATATTCTCA+TGG 0.587662 1:-2357474 None:intergenic
ATTAGGGTTTGAGTTGTAGG+CGG 0.589821 1:-2348411 None:intergenic
ATTAATTGCAGGATTTGAAG+GGG 0.593073 1:+2348597 MsG0180000172.01.T01:intron
AGGTTCAGTTGACCCAGCTA+GGG 0.593913 1:+2350820 MsG0180000172.01.T01:CDS
GCAAGGAAAGGGTCATGCTA+CGG 0.593930 1:+2356879 MsG0180000172.01.T01:CDS
GGAGTGGCAGATGGTGTTGG+TGG 0.594180 1:+2350714 MsG0180000172.01.T01:CDS
TGAGGAACAAGCAGTAGGAG+TGG 0.599865 1:+2350698 MsG0180000172.01.T01:CDS
CCTTCACCAACAACCATCCC+AGG 0.599884 1:-2349124 None:intergenic
AACCCTGTTTGTGCGTCCTG+GGG 0.599939 1:+2348917 MsG0180000172.01.T01:five_prime_UTR
AACCCCAGGACGCACAAACA+GGG 0.600847 1:-2348919 None:intergenic
AATATATGAAACTACAACTG+TGG 0.611636 1:-2353746 None:intergenic
TAACTACAAACCTGAATCGA+CGG 0.613330 1:-2349038 None:intergenic
CATCATAACCAGGATGTGAA+GGG 0.619342 1:-2357616 None:intergenic
ATTCAATTGCCAAGTCGGGT+GGG 0.620463 1:+2357222 MsG0180000172.01.T01:CDS
GTTGTAGGCGGGAATAGAGA+AGG 0.620535 1:-2348399 None:intergenic
CTTGGCATTATACACAGTCA+GGG 0.621009 1:+2349338 MsG0180000172.01.T01:CDS
CTGGAATCTAAGGCAACCCC+AGG 0.622359 1:-2348933 None:intergenic
TCCTGTCTATAGAAGAGACC+CGG 0.625262 1:+2357187 MsG0180000172.01.T01:CDS
GCTGAGATTCTGATTGGACA+AGG 0.625579 1:+2348823 MsG0180000172.01.T01:five_prime_UTR
TGTTCTGAGGAACAAGCAGT+AGG 0.626439 1:+2350693 MsG0180000172.01.T01:CDS
GCTGGATTTCGTTACTATGG+CGG 0.630991 1:+2353709 MsG0180000172.01.T01:CDS
GCATGAAGTCCATCATAACC+AGG 0.631266 1:-2357626 None:intergenic
CCTGATAAAGAAGAAACTGG+TGG 0.633611 1:+2350651 MsG0180000172.01.T01:CDS
GTAGGAGTGGCAGATGGTGT+TGG 0.635159 1:+2350711 MsG0180000172.01.T01:CDS
CCCTATAAATATAATCAAAG+GGG 0.636439 1:-2357346 None:intergenic
TTTCTCTTTAGAAAGCCGAT+CGG 0.638101 1:-2357555 None:intergenic
TCATGCTGCAAAGAGAACAA+TGG 0.639030 1:+2357643 MsG0180000172.01.T01:CDS
CAACGGGCACGTCATGAGCA+GGG 0.640312 1:-2349405 None:intergenic
AGGGGAGAATCTTACAATTG+GGG 0.640361 1:-2348498 None:intergenic
CAAGCAGTAGGAGTGGCAGA+TGG 0.642191 1:+2350705 MsG0180000172.01.T01:CDS
GATGTGGAGTCAATGTCAGA+TGG 0.642589 1:+2357374 MsG0180000172.01.T01:CDS
GGCAACGGCGATCCGAGATG+CGG 0.643444 1:-2355497 None:intergenic
AACGCCGATGAAAACGGCAA+CGG 0.643805 1:-2355512 None:intergenic
CTGAGATTCTGATTGGACAA+GGG 0.643946 1:+2348824 MsG0180000172.01.T01:five_prime_UTR
TTCAGTAGATGCTATTCGGG+AGG 0.644585 1:+2350791 MsG0180000172.01.T01:CDS
CTTGGTGAGAAACACAAGGC+TGG 0.654456 1:+2356916 MsG0180000172.01.T01:CDS
GGGGAGAATCTTACAATTGG+GGG 0.663638 1:-2348497 None:intergenic
GCTTTCTAAAGAGAAAGCAT+GGG 0.666613 1:+2357562 MsG0180000172.01.T01:CDS
TGTATTTGAAGAGTGGTTTG+GGG 0.667530 1:+2349212 MsG0180000172.01.T01:CDS
ATCGACGGCCCTGATACAGA+CGG 0.668956 1:-2349023 None:intergenic
GAGAATGGTCTGAGTTGATG+CGG 0.680850 1:-2355587 None:intergenic
AATGGTCTGAGTTGATGCGG+TGG 0.700511 1:-2355584 None:intergenic
TCAGACCATTCTCAGTCACA+AGG 0.710546 1:+2355597 MsG0180000172.01.T01:CDS
GATAACTCGACTCTGAAGCG+TGG 0.712114 1:+2349154 MsG0180000172.01.T01:CDS
GGGAGAATCTTACAATTGGG+GGG 0.734386 1:-2348496 None:intergenic
ACACAATATCGACATCCGAG+AGG 0.744525 1:-2357313 None:intergenic
TGTGCTTGGTGAGAAACACA+AGG 0.756567 1:+2356912 MsG0180000172.01.T01:CDS
GTGGAAATGAAGAAACCGTG+TGG 0.802724 1:-2355565 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAATTATTGAGAAA+AGG - Chr1:2348521-2348540 None:intergenic 10.0%
!! AAAATAAATTATTGAGAAAA+GGG - Chr1:2348520-2348539 None:intergenic 10.0%
!! ATTAAAGGATTTATAATTAA+AGG - Chr1:2354357-2354376 None:intergenic 10.0%
!! TAAATATATAAACTGAATAA+AGG - Chr1:2351985-2352004 None:intergenic 10.0%
!!! AATTAAACAACATATATTTT+AGG - Chr1:2351879-2351898 None:intergenic 10.0%
!!! ATTTTATTTTAATTGTTTTG+TGG + Chr1:2348551-2348570 MsG0180000172.01.T01:intron 10.0%
!!! TTGATAATAATTTTCTTTTT+TGG + Chr1:2355181-2355200 MsG0180000172.01.T01:intron 10.0%
!!! TTTTTATGTGTTTATAATTA+TGG - Chr1:2354250-2354269 None:intergenic 10.0%
!! AAAAAAAAAAAACAAACCAA+AGG - Chr1:2353911-2353930 None:intergenic 15.0%
!! AAAAGTAATTGAAGAAAATA+AGG - Chr1:2348448-2348467 None:intergenic 15.0%
!! AAAATACACTTGTTTATTAA+AGG + Chr1:2352858-2352877 MsG0180000172.01.T01:intron 15.0%
!! AAAGTAATTGAAGAAAATAA+GGG - Chr1:2348447-2348466 None:intergenic 15.0%
!! AAATAAAAAAGTAAGCATTT+AGG - Chr1:2352791-2352810 None:intergenic 15.0%
!! AAATAAATTATTGAGAAAAG+GGG - Chr1:2348519-2348538 None:intergenic 15.0%
!! AATCTGTATCAATTAATTAA+TGG - Chr1:2352134-2352153 None:intergenic 15.0%
!! ACTTGAATGTAATAAAATTA+AGG + Chr1:2353976-2353995 MsG0180000172.01.T01:intron 15.0%
!! CTATAATAATAATTAATTGC+AGG + Chr1:2348586-2348605 MsG0180000172.01.T01:intron 15.0%
!! TAGAAACATAGAAAAATAAA+GGG - Chr1:2354942-2354961 None:intergenic 15.0%
!! TTGTTACAATATATCTTATT+TGG + Chr1:2351488-2351507 MsG0180000172.01.T01:intron 15.0%
!! TTTCCTTTCTTAAATTATTA+TGG - Chr1:2355051-2355070 None:intergenic 15.0%
!!! AAATTATACCTATTTTATTC+TGG - Chr1:2352260-2352279 None:intergenic 15.0%
!!! AATGGATTTTATATACTTTA+GGG + Chr1:2356405-2356424 MsG0180000172.01.T01:intron 15.0%
!!! ATAAACAAGTGTATTTTATT+TGG - Chr1:2352855-2352874 None:intergenic 15.0%
!!! ATAACTTGTTTATCAAAATA+TGG + Chr1:2355981-2356000 MsG0180000172.01.T01:intron 15.0%
!!! ATCAATTAATTAATGGATAA+GGG - Chr1:2352127-2352146 None:intergenic 15.0%
!!! ATTTTCTTCAATTACTTTTA+GGG + Chr1:2348449-2348468 MsG0180000172.01.T01:five_prime_UTR 15.0%
!!! GTGAAATCTATATTTTTTTA+GGG + Chr1:2354876-2354895 MsG0180000172.01.T01:intron 15.0%
!!! TAATAATGTGGATTATATAA+TGG + Chr1:2356387-2356406 MsG0180000172.01.T01:intron 15.0%
!!! TAATGGATTTTATATACTTT+AGG + Chr1:2356404-2356423 MsG0180000172.01.T01:intron 15.0%
!!! TAATTAAGTTTTATAATCCT+TGG + Chr1:2351894-2351913 MsG0180000172.01.T01:intron 15.0%
!!! TATCAATTAATTAATGGATA+AGG - Chr1:2352128-2352147 None:intergenic 15.0%
!!! TATTTTCTTCAATTACTTTT+AGG + Chr1:2348448-2348467 MsG0180000172.01.T01:five_prime_UTR 15.0%
!!! TGAAATCTATATTTTTTTAG+GGG + Chr1:2354877-2354896 MsG0180000172.01.T01:intron 15.0%
!!! TGTGAAATCTATATTTTTTT+AGG + Chr1:2354875-2354894 MsG0180000172.01.T01:intron 15.0%
!!! TGTTTAAAAGATTTTCTTAA+AGG - Chr1:2355234-2355253 None:intergenic 15.0%
!! AAAAAAAAAGAGAGAGATTT+GGG - Chr1:2350422-2350441 None:intergenic 20.0%
!! AAAATGTCAAGGTTAAATTA+TGG - Chr1:2350301-2350320 None:intergenic 20.0%
!! AATCTATGATCTGATTATAA+TGG - Chr1:2349508-2349527 None:intergenic 20.0%
!! AATTAAATGATTGTAATGGT+AGG + Chr1:2353073-2353092 MsG0180000172.01.T01:intron 20.0%
!! ACACCATAATAATTTAAGAA+AGG + Chr1:2355045-2355064 MsG0180000172.01.T01:intron 20.0%
!! ATATATTGTAACAACTAACA+AGG - Chr1:2351482-2351501 None:intergenic 20.0%
!! ATCCCTATAAATATAATCAA+AGG - Chr1:2357351-2357370 None:intergenic 20.0%
!! ATGTGTTATATCTTTGTATA+TGG + Chr1:2349988-2350007 MsG0180000172.01.T01:intron 20.0%
!! ATTAAATGATTGTAATGGTA+GGG + Chr1:2353074-2353093 MsG0180000172.01.T01:intron 20.0%
!! ATTAACAAACGAAAAATATC+TGG - Chr1:2352372-2352391 None:intergenic 20.0%
!! CAAGTTTCAAATTAAAACAA+TGG + Chr1:2349090-2349109 MsG0180000172.01.T01:exon 20.0%
!! CATAAACAAGACAATATATT+AGG - Chr1:2353277-2353296 None:intergenic 20.0%
!! CTAGAAACATAGAAAAATAA+AGG - Chr1:2354943-2354962 None:intergenic 20.0%
!! TAAAAAAAAAGAGAGAGATT+TGG - Chr1:2350423-2350442 None:intergenic 20.0%
!! TATAAAATGCAGATTTCAAT+GGG - Chr1:2350477-2350496 None:intergenic 20.0%
!! TATATGATCCATAAAGATTT+AGG + Chr1:2352422-2352441 MsG0180000172.01.T01:intron 20.0%
!! TCCCTATAAATATAATCAAA+GGG - Chr1:2357350-2357369 None:intergenic 20.0%
!! TGTTCATATATATTTAACCA+TGG + Chr1:2353324-2353343 MsG0180000172.01.T01:intron 20.0%
!! TTATAAAATGCAGATTTCAA+TGG - Chr1:2350478-2350497 None:intergenic 20.0%
!! TTATTGTATTTAGCATGTAT+TGG + Chr1:2348679-2348698 MsG0180000172.01.T01:five_prime_UTR 20.0%
!!! ACAAATTTTCACATACATTA+GGG - Chr1:2356347-2356366 None:intergenic 20.0%
!!! AGTGATATTTTGATGTTTTT+TGG + Chr1:2351403-2351422 MsG0180000172.01.T01:intron 20.0%
!!! ATTAGTTAGTATTGATCTTA+GGG + Chr1:2349884-2349903 MsG0180000172.01.T01:intron 20.0%
!!! ATTTTTCGTTTGTTAATGTT+GGG + Chr1:2352375-2352394 MsG0180000172.01.T01:intron 20.0%
!!! GTAATTTTCCTAAATCTTTA+TGG - Chr1:2352433-2352452 None:intergenic 20.0%
!!! TATTTTGTGTAAAAGAGATA+TGG + Chr1:2349706-2349725 MsG0180000172.01.T01:intron 20.0%
!!! TATTTTTCGTTTGTTAATGT+TGG + Chr1:2352374-2352393 MsG0180000172.01.T01:intron 20.0%
!!! TTAAAAATTTGAAATCCCAA+GGG + Chr1:2354415-2354434 MsG0180000172.01.T01:intron 20.0%
!!! TTTAAAAATTTGAAATCCCA+AGG + Chr1:2354414-2354433 MsG0180000172.01.T01:intron 20.0%
!!! TTTCTGAAATATAAATTTGC+TGG + Chr1:2351281-2351300 MsG0180000172.01.T01:intron 20.0%
!!! TTTTATAACCAAAAAACTAC+CGG + Chr1:2350490-2350509 MsG0180000172.01.T01:intron 20.0%
! AAACAAACCAAAGGATAAAA+TGG - Chr1:2353902-2353921 None:intergenic 25.0%
! AAATATCTATATGTGATCAC+AGG + Chr1:2349647-2349666 MsG0180000172.01.T01:intron 25.0%
! AAATTATGGACTTTATCGAT+TGG - Chr1:2351815-2351834 None:intergenic 25.0%
! AAGCTTTCAACTTCATAAAA+GGG - Chr1:2350173-2350192 None:intergenic 25.0%
! AAGTTAGCCATTCAATTTAT+GGG + Chr1:2356088-2356107 MsG0180000172.01.T01:intron 25.0%
! AATATATGAAACTACAACTG+TGG - Chr1:2353749-2353768 None:intergenic 25.0%
! AATATCTATATGTGATCACA+GGG + Chr1:2349648-2349667 MsG0180000172.01.T01:intron 25.0%
! AATGAAGTTTACGAATTGAT+AGG + Chr1:2354498-2354517 MsG0180000172.01.T01:intron 25.0%
! AATTAATTGCAGGATTTGAA+GGG + Chr1:2348596-2348615 MsG0180000172.01.T01:intron 25.0%
! ACCCCTTTGATTATATTTAT+AGG + Chr1:2357345-2357364 MsG0180000172.01.T01:CDS 25.0%
! AGAAAGAAGAAAAAAACTAG+AGG - Chr1:2354679-2354698 None:intergenic 25.0%
! AGTTGGCATATCTAATTATT+TGG + Chr1:2357115-2357134 MsG0180000172.01.T01:CDS 25.0%
! ATAACACATAAGAACTGTTA+GGG - Chr1:2349977-2349996 None:intergenic 25.0%
! ATACAATAATGAGATTACAG+CGG + Chr1:2353562-2353581 MsG0180000172.01.T01:intron 25.0%
! ATACTTCAGAACTAAATTGA+TGG - Chr1:2356281-2356300 None:intergenic 25.0%
! ATCACTTACAGCAAAAATAA+AGG - Chr1:2351389-2351408 None:intergenic 25.0%
! ATGTTATTAAGATGTGGTAA+GGG - Chr1:2356465-2356484 None:intergenic 25.0%
! ATTGATATGTGAGAAAATAG+AGG + Chr1:2353103-2353122 MsG0180000172.01.T01:intron 25.0%
! CAGCAATTAAATGATTGTAA+TGG + Chr1:2353069-2353088 MsG0180000172.01.T01:intron 25.0%
! CCCCTTTGATTATATTTATA+GGG + Chr1:2357346-2357365 MsG0180000172.01.T01:CDS 25.0%
! CCCTATAAATATAATCAAAG+GGG - Chr1:2357349-2357368 None:intergenic 25.0%
! CTGTAATCTCATTATTGTAT+AGG - Chr1:2353562-2353581 None:intergenic 25.0%
! CTTGAATTAAAACCACATTT+GGG - Chr1:2352933-2352952 None:intergenic 25.0%
! GATGTCAATTATCAAATTAG+AGG + Chr1:2352887-2352906 MsG0180000172.01.T01:intron 25.0%
! GGTCTAATATTTACAAAACT+TGG + Chr1:2356002-2356021 MsG0180000172.01.T01:intron 25.0%
! GTAAATAGATGTAATAGCAA+TGG - Chr1:2351060-2351079 None:intergenic 25.0%
! GTTGTAGTTTCATATATTAC+TGG + Chr1:2353751-2353770 MsG0180000172.01.T01:CDS 25.0%
! TAAAACATATCCTAAAACCA+AGG - Chr1:2351914-2351933 None:intergenic 25.0%
! TAAATCTTCATAGCGTTTAA+CGG - Chr1:2354830-2354849 None:intergenic 25.0%
! TAAATTGAAACTCGATCAAA+TGG - Chr1:2354652-2354671 None:intergenic 25.0%
! TAAGCTTTCAACTTCATAAA+AGG - Chr1:2350174-2350193 None:intergenic 25.0%
! TAATCCATGTTATTAAGATG+TGG - Chr1:2356471-2356490 None:intergenic 25.0%
! TAATTAATTGCAGGATTTGA+AGG + Chr1:2348595-2348614 MsG0180000172.01.T01:intron 25.0%
! TACTTTACCCATAAATTGAA+TGG - Chr1:2356098-2356117 None:intergenic 25.0%
! TAGCAAATCATATAATGCAT+CGG + Chr1:2356249-2356268 MsG0180000172.01.T01:intron 25.0%
! TATAACACATAAGAACTGTT+AGG - Chr1:2349978-2349997 None:intergenic 25.0%
! TCATCAATTGAGAGAAATTT+GGG + Chr1:2349926-2349945 MsG0180000172.01.T01:intron 25.0%
! TCTTGAATTAAAACCACATT+TGG - Chr1:2352934-2352953 None:intergenic 25.0%
! TGAAAGAATAACATTCAGAA+AGG - Chr1:2351725-2351744 None:intergenic 25.0%
! TTAAATGATTGTAATGGTAG+GGG + Chr1:2353075-2353094 MsG0180000172.01.T01:intron 25.0%
! TTAAGAAAGGAAATGTTAAC+CGG + Chr1:2355058-2355077 MsG0180000172.01.T01:intron 25.0%
! TTCTTTCTTAATCAATAGGT+TGG + Chr1:2350101-2350120 MsG0180000172.01.T01:intron 25.0%
! TTGAACTTAAAAATCTTGCT+CGG + Chr1:2353876-2353895 MsG0180000172.01.T01:intron 25.0%
! TTGATATGTGAGAAAATAGA+GGG + Chr1:2353104-2353123 MsG0180000172.01.T01:intron 25.0%
! TTTACACTTAGTGAATAATG+AGG + Chr1:2354281-2354300 MsG0180000172.01.T01:intron 25.0%
!! AAGTAAGCATTTAGGTTATT+TGG - Chr1:2352783-2352802 None:intergenic 25.0%
!! AGTAAGCATTTAGGTTATTT+GGG - Chr1:2352782-2352801 None:intergenic 25.0%
!! ATCACTAGTTTAAAATGTCA+AGG - Chr1:2350312-2350331 None:intergenic 25.0%
!! ATTACATTCAAGTTCTAACT+AGG - Chr1:2353969-2353988 None:intergenic 25.0%
!! CATCTTAATAACATGGATTA+AGG + Chr1:2356471-2356490 MsG0180000172.01.T01:intron 25.0%
!! GACAAATTTTCACATACATT+AGG - Chr1:2356348-2356367 None:intergenic 25.0%
!! TATCAATGACTTAAAAGTGT+CGG + Chr1:2350337-2350356 MsG0180000172.01.T01:intron 25.0%
!! TCTTAAGTGACTTCTATTTT+GGG + Chr1:2354605-2354624 MsG0180000172.01.T01:intron 25.0%
!! TTGTAGAATACAATGCTTTT+AGG + Chr1:2350982-2351001 MsG0180000172.01.T01:intron 25.0%
!!! AATCAAGTTCATTTTTGTTG+AGG + Chr1:2348893-2348912 MsG0180000172.01.T01:five_prime_UTR 25.0%
!!! AATCATTTAATTGCTGTTTG+AGG - Chr1:2353065-2353084 None:intergenic 25.0%
!!! AGCAAGATTTTTAAGTTCAA+AGG - Chr1:2353876-2353895 None:intergenic 25.0%
!!! ATATTGTCTTGTTTATGCAA+TGG + Chr1:2353280-2353299 MsG0180000172.01.T01:intron 25.0%
!!! GATTAGTTAGTATTGATCTT+AGG + Chr1:2349883-2349902 MsG0180000172.01.T01:intron 25.0%
!!! GGAAATTGCTATTTATAAAG+AGG + Chr1:2357025-2357044 MsG0180000172.01.T01:intron 25.0%
!!! GTTTTATAATCCTTGGTTTT+AGG + Chr1:2351901-2351920 MsG0180000172.01.T01:intron 25.0%
!!! TATTGTCTTGTTTATGCAAT+GGG + Chr1:2353281-2353300 MsG0180000172.01.T01:intron 25.0%
!!! TCTTTTTTGGCATTTTTAAC+CGG + Chr1:2355194-2355213 MsG0180000172.01.T01:intron 25.0%
!!! TGTGTGAGTTTTGTATATTT+TGG + Chr1:2348622-2348641 MsG0180000172.01.T01:five_prime_UTR 25.0%
!!! TTAGTTAGTATTGATCTTAG+GGG + Chr1:2349885-2349904 MsG0180000172.01.T01:intron 25.0%
!!! TTATTTGGGTTTGCTATAAA+AGG - Chr1:2352768-2352787 None:intergenic 25.0%
!!! TTCAATTACTTTTAGGGTTA+GGG + Chr1:2348455-2348474 MsG0180000172.01.T01:five_prime_UTR 25.0%
!!! TTCACATTTTAGCAACTAAA+TGG - Chr1:2353940-2353959 None:intergenic 25.0%
AAAACAGAAGATGTGGTAAT+GGG - Chr1:2354804-2354823 None:intergenic 30.0%
AAAACTAATCTGTGATGTGT+TGG + Chr1:2351174-2351193 MsG0180000172.01.T01:intron 30.0%
AAAATGTGTGTGTATGTACA+AGG - Chr1:2353809-2353828 None:intergenic 30.0%
AAATGTGTGTGTATGTACAA+GGG - Chr1:2353808-2353827 None:intergenic 30.0%
AACCCAAAAGTTAATTGACT+CGG - Chr1:2354016-2354035 None:intergenic 30.0%
AACTAAACTAAACTTCTGAC+CGG + Chr1:2348340-2348359 MsG0180000172.01.T01:five_prime_UTR 30.0%
AACTTACAGTTCAGATGAAT+CGG - Chr1:2349467-2349486 None:intergenic 30.0%
AAGAACAAAAAGCAGATTGA+CGG + Chr1:2350078-2350097 MsG0180000172.01.T01:intron 30.0%
AAGCATAACCTTAAGTAGAA+AGG - Chr1:2355775-2355794 None:intergenic 30.0%
AAGTTGAAAGCTTAGTTGTT+GGG + Chr1:2350180-2350199 MsG0180000172.01.T01:intron 30.0%
AATAGTGTGTATTTGAAGAG+TGG + Chr1:2349205-2349224 MsG0180000172.01.T01:CDS 30.0%
ACAGTCAAACTACATATAAC+AGG - Chr1:2349608-2349627 None:intergenic 30.0%
ACCTAGGGACTTAATATAAA+AGG + Chr1:2352158-2352177 MsG0180000172.01.T01:intron 30.0%
ACGGTTCTTTCTTAATCAAT+AGG + Chr1:2350097-2350116 MsG0180000172.01.T01:intron 30.0%
ACTTCTAACTAGCATGAAAA+GGG + Chr1:2351242-2351261 MsG0180000172.01.T01:intron 30.0%
AGAATATGGGTATATAACTC+TGG + Chr1:2357479-2357498 MsG0180000172.01.T01:CDS 30.0%
AGCCTTGAAAAATAATTGGA+TGG - Chr1:2348764-2348783 None:intergenic 30.0%
AGTATTCAGTGATTTACAGA+GGG - Chr1:2352629-2352648 None:intergenic 30.0%
ATAGTGATTTACCTAGTTTC+TGG + Chr1:2351681-2351700 MsG0180000172.01.T01:intron 30.0%
ATCCACATTATTAAGATGTC+AGG - Chr1:2356380-2356399 None:intergenic 30.0%
ATGCATACAAAAGGATATGA+TGG + Chr1:2351771-2351790 MsG0180000172.01.T01:intron 30.0%
ATGCATTTACATTGCACAAA+GGG - Chr1:2351757-2351776 None:intergenic 30.0%
ATGCTAGTTAGAAGTCAAAA+GGG - Chr1:2351237-2351256 None:intergenic 30.0%
ATTAATTGCAGGATTTGAAG+GGG + Chr1:2348597-2348616 MsG0180000172.01.T01:intron 30.0%
ATTATAATGGCAAACATGAG+AGG - Chr1:2349495-2349514 None:intergenic 30.0%
CAAAATAGAAGTCACTTAAG+AGG - Chr1:2354606-2354625 None:intergenic 30.0%
CACAGTGACTAAATATATTC+TGG + Chr1:2350521-2350540 MsG0180000172.01.T01:intron 30.0%
CAGTCACAAATAATCTGTAA+GGG - Chr1:2351140-2351159 None:intergenic 30.0%
CATCAATTGAGAGAAATTTG+GGG + Chr1:2349927-2349946 MsG0180000172.01.T01:intron 30.0%
CATGTTAAGGATATCAAAAG+TGG - Chr1:2356579-2356598 None:intergenic 30.0%
CATGTTATTAAGATGTGGTA+AGG - Chr1:2356466-2356485 None:intergenic 30.0%
CGAAATTTGATAAACAGCAA+TGG + Chr1:2355426-2355445 MsG0180000172.01.T01:intron 30.0%
CTCATCAATTGAGAGAAATT+TGG + Chr1:2349925-2349944 MsG0180000172.01.T01:intron 30.0%
CTTAATATAAAAGGTGAGCA+AGG + Chr1:2352167-2352186 MsG0180000172.01.T01:intron 30.0%
CTTACAGCAAAAATAAAGGT+AGG - Chr1:2351385-2351404 None:intergenic 30.0%
CTTACCACATCTTAATAACA+TGG + Chr1:2356464-2356483 MsG0180000172.01.T01:intron 30.0%
GAACCTTACTGTTCATAAAA+AGG - Chr1:2357676-2357695 None:intergenic 30.0%
GAAGTTAGCCATTCAATTTA+TGG + Chr1:2356087-2356106 MsG0180000172.01.T01:intron 30.0%
GCAATGTAAATGCATACAAA+AGG + Chr1:2351762-2351781 MsG0180000172.01.T01:intron 30.0%
GCTGTTTATCAAATTTCGAT+CGG - Chr1:2355424-2355443 None:intergenic 30.0%
GTAACTGCTATAACATCATT+AGG + Chr1:2356024-2356043 MsG0180000172.01.T01:intron 30.0%
GTCTTTGATGAACCTAAAAT+GGG + Chr1:2357431-2357450 MsG0180000172.01.T01:CDS 30.0%
GTTATATACCCATATTCTCA+TGG - Chr1:2357477-2357496 None:intergenic 30.0%
GTTATATGTAGTTTGACTGT+TGG + Chr1:2349608-2349627 MsG0180000172.01.T01:intron 30.0%
TAAAACAGAAGATGTGGTAA+TGG - Chr1:2354805-2354824 None:intergenic 30.0%
TACTAACTAATCCTGAACAT+AGG - Chr1:2349875-2349894 None:intergenic 30.0%
TAGAACACTTCAATAACACA+AGG - Chr1:2350245-2350264 None:intergenic 30.0%
TAGGGACTACTTATATACTT+AGG + Chr1:2356423-2356442 MsG0180000172.01.T01:intron 30.0%
TATGCATTTACATTGCACAA+AGG - Chr1:2351758-2351777 None:intergenic 30.0%
TATGCCAACTTTCTTGATAT+TGG - Chr1:2357105-2357124 None:intergenic 30.0%
TATTTATAGGGATTCAGATG+TGG + Chr1:2357358-2357377 MsG0180000172.01.T01:CDS 30.0%
TCAAATAACAAGTCATCACT+TGG - Chr1:2353834-2353853 None:intergenic 30.0%
TCAGTCACAAATAATCTGTA+AGG - Chr1:2351141-2351160 None:intergenic 30.0%
TCCACATTATTAAGATGTCA+GGG - Chr1:2356379-2356398 None:intergenic 30.0%
TCGATTGGAAAGTGATATAA+AGG - Chr1:2351800-2351819 None:intergenic 30.0%
TCTTTAGCAAATAGACTACT+CGG - Chr1:2350214-2350233 None:intergenic 30.0%
TGACATGAAGCAACAATTAA+AGG - Chr1:2354372-2354391 None:intergenic 30.0%
TGACTACTACATTAACTGAT+AGG - Chr1:2351662-2351681 None:intergenic 30.0%
TGATACAGATTGTAAACCTA+GGG + Chr1:2352143-2352162 MsG0180000172.01.T01:intron 30.0%
TGATATGTGAGAAAATAGAG+GGG + Chr1:2353105-2353124 MsG0180000172.01.T01:intron 30.0%
TGCTTTATAGTAACACGTAT+AGG + Chr1:2354095-2354114 MsG0180000172.01.T01:intron 30.0%
TGGATTAAGGAACTCAATAT+AGG + Chr1:2356484-2356503 MsG0180000172.01.T01:intron 30.0%
TGGGTTCTATTGTTTATATC+AGG + Chr1:2353472-2353491 MsG0180000172.01.T01:intron 30.0%
TGTAAAACCACTCTTCAAAA+TGG + Chr1:2350026-2350045 MsG0180000172.01.T01:intron 30.0%
TGTCTTTGATGAACCTAAAA+TGG + Chr1:2357430-2357449 MsG0180000172.01.T01:CDS 30.0%
TTATAATGGCAAACATGAGA+GGG - Chr1:2349494-2349513 None:intergenic 30.0%
TTCACCAATATCAAGAAAGT+TGG + Chr1:2357098-2357117 MsG0180000172.01.T01:CDS 30.0%
TTCATGTTCAGGTGATTAAA+TGG - Chr1:2352601-2352620 None:intergenic 30.0%
TTGATACAGATTGTAAACCT+AGG + Chr1:2352142-2352161 MsG0180000172.01.T01:intron 30.0%
! ACCTTTTATATTAAGTCCCT+AGG - Chr1:2352162-2352181 None:intergenic 30.0%
! AGAGATTTGGGTGAAATTTT+TGG - Chr1:2350410-2350429 None:intergenic 30.0%
! ATCAAGTTTTCTCATATGGA+GGG - Chr1:2350273-2350292 None:intergenic 30.0%
! ATCGATTTAGGGAAAAAAAG+TGG + Chr1:2348787-2348806 MsG0180000172.01.T01:five_prime_UTR 30.0%
! CTCTTAAGTGACTTCTATTT+TGG + Chr1:2354604-2354623 MsG0180000172.01.T01:intron 30.0%
! GTACCTTTTTATGAACAGTA+AGG + Chr1:2357670-2357689 MsG0180000172.01.T01:CDS 30.0%
! TACCGAGTCAATTAACTTTT+GGG + Chr1:2354011-2354030 MsG0180000172.01.T01:intron 30.0%
! TGCTCATTTTATATGTTCTG+AGG + Chr1:2350680-2350699 MsG0180000172.01.T01:CDS 30.0%
! TTAGTTCTTTCATGCTTGTA+GGG + Chr1:2353441-2353460 MsG0180000172.01.T01:intron 30.0%
! TTTCCATTGTTATGCTCTTT+TGG - Chr1:2354554-2354573 None:intergenic 30.0%
! TTTCTTAATCAATAGGTTGG+AGG + Chr1:2350104-2350123 MsG0180000172.01.T01:intron 30.0%
!! AAATATAAATTTGCTGGCCT+TGG + Chr1:2351287-2351306 MsG0180000172.01.T01:intron 30.0%
!! AAGAGTGGTTTTACAATGAT+AGG - Chr1:2350021-2350040 None:intergenic 30.0%
!! ATCTGTTTTGAATTATCCGA+TGG + Chr1:2351094-2351113 MsG0180000172.01.T01:intron 30.0%
!! ATTGTCTTGTTTATGCAATG+GGG + Chr1:2353282-2353301 MsG0180000172.01.T01:intron 30.0%
!! CATTTTAGCAACTAAATGGT+TGG - Chr1:2353936-2353955 None:intergenic 30.0%
!! GTTTCATATATTACTGGTTC+TGG + Chr1:2353757-2353776 MsG0180000172.01.T01:CDS 30.0%
!! TAGTTAGTATTGATCTTAGG+GGG + Chr1:2349886-2349905 MsG0180000172.01.T01:intron 30.0%
!! TAGTTCTGAACTAATCACAA+TGG + Chr1:2356211-2356230 MsG0180000172.01.T01:intron 30.0%
!! TATATTTTAGGCACTTTCAG+AGG - Chr1:2351867-2351886 None:intergenic 30.0%
!! TATTTAGCATGTATTGGTTC+TGG + Chr1:2348685-2348704 MsG0180000172.01.T01:five_prime_UTR 30.0%
!! TCGCAAGTTTTATGATGTAA+GGG - Chr1:2354186-2354205 None:intergenic 30.0%
!! TGCCATCCAATTATTTTTCA+AGG + Chr1:2348759-2348778 MsG0180000172.01.T01:five_prime_UTR 30.0%
!! TTCGCAAGTTTTATGATGTA+AGG - Chr1:2354187-2354206 None:intergenic 30.0%
!! TTTAGTTCTTTCATGCTTGT+AGG + Chr1:2353440-2353459 MsG0180000172.01.T01:intron 30.0%
!!! AACATGGAGATTTTGACTTA+AGG + Chr1:2349683-2349702 MsG0180000172.01.T01:intron 30.0%
!!! CTTCAATTACTTTTAGGGTT+AGG + Chr1:2348454-2348473 MsG0180000172.01.T01:five_prime_UTR 30.0%
!!! GATGTTTTTTGGTGTATAGT+TGG + Chr1:2351414-2351433 MsG0180000172.01.T01:intron 30.0%
!!! GTAAGTTTTTGAGACGATTT+GGG + Chr1:2355676-2355695 MsG0180000172.01.T01:intron 30.0%
!!! TCCAATTATTTTTCAAGGCT+CGG + Chr1:2348764-2348783 MsG0180000172.01.T01:five_prime_UTR 30.0%
!!! TGTAAGTTTTTGAGACGATT+TGG + Chr1:2355675-2355694 MsG0180000172.01.T01:intron 30.0%
!!! TTAACTTTTGGGTTAGAGTT+TGG + Chr1:2354022-2354041 MsG0180000172.01.T01:intron 30.0%
!!! TTGTGATAGTGTTTTTTGTG+TGG + Chr1:2353361-2353380 MsG0180000172.01.T01:intron 30.0%
!!! TTTTAGCTCCTTTCTACTTA+AGG + Chr1:2355764-2355783 MsG0180000172.01.T01:intron 30.0%
!!! TTTTTTGCGCTCTTTTCATA+GGG + Chr1:2351538-2351557 MsG0180000172.01.T01:intron 30.0%
!!! TTTTTTTGCGCTCTTTTCAT+AGG + Chr1:2351537-2351556 MsG0180000172.01.T01:intron 30.0%
AAACCTTAAAGTCAACTGGA+TGG - Chr1:2355400-2355419 None:intergenic 35.0%
AAAGGGGAGAATCTTACAAT+TGG - Chr1:2348503-2348522 None:intergenic 35.0%
AAATTGAATGGACCCAAATG+TGG + Chr1:2352918-2352937 MsG0180000172.01.T01:intron 35.0%
AACTAATCCTGAACATAGGA+AGG - Chr1:2349871-2349890 None:intergenic 35.0%
AAGAAATCACCAATGACCAT+CGG - Chr1:2351113-2351132 None:intergenic 35.0%
AAGGGGAGAATCTTACAATT+GGG - Chr1:2348502-2348521 None:intergenic 35.0%
AATAAAGGTGACACATCCAA+GGG - Chr1:2351970-2351989 None:intergenic 35.0%
AATCCCATCTTTGCATAGAA+AGG + Chr1:2349737-2349756 MsG0180000172.01.T01:intron 35.0%
AATGTGTGTGTATGTACAAG+GGG - Chr1:2353807-2353826 None:intergenic 35.0%
AATTATATTGACCTCCCTTG+AGG - Chr1:2353153-2353172 None:intergenic 35.0%
AATTCAGCTTGATTGAATGG+TGG + Chr1:2352286-2352305 MsG0180000172.01.T01:intron 35.0%
ACATCATAAAACTTGCGAAG+TGG + Chr1:2354188-2354207 MsG0180000172.01.T01:intron 35.0%
ACGGTATAAAACAGAAGATG+TGG - Chr1:2354811-2354830 None:intergenic 35.0%
ACTAATCCTGAACATAGGAA+GGG - Chr1:2349870-2349889 None:intergenic 35.0%
ACTGAACATTTGCATTTGAC+TGG + Chr1:2349814-2349833 MsG0180000172.01.T01:intron 35.0%
AGAAGAGACAGACATAAATG+TGG + Chr1:2355296-2355315 MsG0180000172.01.T01:intron 35.0%
AGCTCAATTGAAGGAATTGT+TGG - Chr1:2357521-2357540 None:intergenic 35.0%
AGGGAAAAAAAGTGGAATTC+AGG + Chr1:2348795-2348814 MsG0180000172.01.T01:five_prime_UTR 35.0%
AGGGTTCTTTAAACAGAACA+TGG + Chr1:2349667-2349686 MsG0180000172.01.T01:intron 35.0%
AGTGTATAAGTCAGTAGAGT+GGG + Chr1:2352209-2352228 MsG0180000172.01.T01:intron 35.0%
ATAAGGGTGAGAGAGAAATT+AGG - Chr1:2348431-2348450 None:intergenic 35.0%
ATACTCAAGCACAAAAGCTA+AGG + Chr1:2350856-2350875 MsG0180000172.01.T01:intron 35.0%
ATCTTACTGAAGCTATGATC+GGG + Chr1:2354121-2354140 MsG0180000172.01.T01:intron 35.0%
ATGCTCATACCATGAGAATA+TGG + Chr1:2357465-2357484 MsG0180000172.01.T01:CDS 35.0%
ATGTAAGAGGAAACATGCAA+AGG - Chr1:2352028-2352047 None:intergenic 35.0%
ATTACGTTTACACATACCTC+GGG - Chr1:2352464-2352483 None:intergenic 35.0%
ATTCTTGCAATACTCCAAAG+AGG - Chr1:2350942-2350961 None:intergenic 35.0%
ATTGAATCAACACCTTGATC+CGG - Chr1:2357209-2357228 None:intergenic 35.0%
ATTTGATAAACAGCAATGGC+AGG + Chr1:2355430-2355449 MsG0180000172.01.T01:intron 35.0%
CAAGTGATATCCAACAACTA+AGG - Chr1:2352523-2352542 None:intergenic 35.0%
CAATTCAGTAGATGCTATTC+GGG + Chr1:2350788-2350807 MsG0180000172.01.T01:CDS 35.0%
CAGAATTCAGCTTGATTGAA+TGG + Chr1:2352283-2352302 MsG0180000172.01.T01:intron 35.0%
CATAGCAATCATACAGCTTA+TGG + Chr1:2357398-2357417 MsG0180000172.01.T01:CDS 35.0%
CATCCTGATAAAGAAGAAAC+TGG + Chr1:2350648-2350667 MsG0180000172.01.T01:CDS 35.0%
CATCTTACTGAAGCTATGAT+CGG + Chr1:2354120-2354139 MsG0180000172.01.T01:intron 35.0%
CATGCTAGTTAGAAGTCAAA+AGG - Chr1:2351238-2351257 None:intergenic 35.0%
CCAAAAATTGCACCATTATC+TGG - Chr1:2349280-2349299 None:intergenic 35.0%
CCAATTCAGTAGATGCTATT+CGG + Chr1:2350787-2350806 MsG0180000172.01.T01:CDS 35.0%
CGATCTAAAAGCTCAATTGA+AGG - Chr1:2357530-2357549 None:intergenic 35.0%
CTCCATATGAGAAAACTTGA+TGG + Chr1:2350272-2350291 MsG0180000172.01.T01:intron 35.0%
CTTATACTTTGACAAGTCCA+AGG - Chr1:2351307-2351326 None:intergenic 35.0%
GAAGTTGAAAGCTTAGTTGT+TGG + Chr1:2350179-2350198 MsG0180000172.01.T01:intron 35.0%
GACTTCTAACTAGCATGAAA+AGG + Chr1:2351241-2351260 MsG0180000172.01.T01:intron 35.0%
GAGGCAATACCAAAATTGAA+TGG + Chr1:2352906-2352925 MsG0180000172.01.T01:intron 35.0%
GAGTATTCAGTGATTTACAG+AGG - Chr1:2352630-2352649 None:intergenic 35.0%
GATATGTGAGAAAATAGAGG+GGG + Chr1:2353106-2353125 MsG0180000172.01.T01:intron 35.0%
GATCCACATTAAAAAGACAG+AGG - Chr1:2354780-2354799 None:intergenic 35.0%
GATCCTTTCTATGCAAAGAT+GGG - Chr1:2349743-2349762 None:intergenic 35.0%
GATTACGTTTACACATACCT+CGG - Chr1:2352465-2352484 None:intergenic 35.0%
GCATGAAAGAACTAAATGCA+TGG - Chr1:2353436-2353455 None:intergenic 35.0%
GTGATGAGTAAGCAAATAGA+GGG - Chr1:2352494-2352513 None:intergenic 35.0%
GTGTATTTGAAGAGTGGTTT+GGG + Chr1:2349211-2349230 MsG0180000172.01.T01:CDS 35.0%
GTTTCTTCTTTATCAGGATG+AGG - Chr1:2350648-2350667 None:intergenic 35.0%
TAAATACCTGACCAGAAACT+AGG - Chr1:2351695-2351714 None:intergenic 35.0%
TAACCCACACTTAAATGACA+GGG + Chr1:2354900-2354919 MsG0180000172.01.T01:intron 35.0%
TAACTACAAACCTGAATCGA+CGG - Chr1:2349041-2349060 None:intergenic 35.0%
TAAGGGTGAGAGAGAAATTA+GGG - Chr1:2348430-2348449 None:intergenic 35.0%
TAATGTGTTGGAGATGTTAC+AGG + Chr1:2357070-2357089 MsG0180000172.01.T01:intron 35.0%
TACTCAAGCACAAAAGCTAA+GGG + Chr1:2350857-2350876 MsG0180000172.01.T01:intron 35.0%
TAGTGTATAAGTCAGTAGAG+TGG + Chr1:2352208-2352227 MsG0180000172.01.T01:intron 35.0%
TCCCTGACATCTTAATAATG+TGG + Chr1:2356375-2356394 MsG0180000172.01.T01:intron 35.0%
TCCGAGCCTTGAAAAATAAT+TGG - Chr1:2348768-2348787 None:intergenic 35.0%
TCGGAGCTAAAATATGTAAG+AGG - Chr1:2352041-2352060 None:intergenic 35.0%
TCTGTAATGCTGCAAAGAAT+TGG + Chr1:2349308-2349327 MsG0180000172.01.T01:CDS 35.0%
TGATCCTTTCTATGCAAAGA+TGG - Chr1:2349744-2349763 None:intergenic 35.0%
TGATGAGTAAGCAAATAGAG+GGG - Chr1:2352493-2352512 None:intergenic 35.0%
TGCTCATACCATGAGAATAT+GGG + Chr1:2357466-2357485 MsG0180000172.01.T01:CDS 35.0%
TGTATTTGAAGAGTGGTTTG+GGG + Chr1:2349212-2349231 MsG0180000172.01.T01:CDS 35.0%
TGTCAGAACACTACAAACTA+AGG - Chr1:2353182-2353201 None:intergenic 35.0%
TGTGATGAGTAAGCAAATAG+AGG - Chr1:2352495-2352514 None:intergenic 35.0%
TGTGTATTTGAAGAGTGGTT+TGG + Chr1:2349210-2349229 MsG0180000172.01.T01:CDS 35.0%
TGTTATGATGTGACTGAATC+TGG + Chr1:2350562-2350581 MsG0180000172.01.T01:intron 35.0%
TTGAATTATCCGATGGTCAT+TGG + Chr1:2351101-2351120 MsG0180000172.01.T01:intron 35.0%
TTGATGAACCTAAAATGGGT+TGG + Chr1:2357435-2357454 MsG0180000172.01.T01:CDS 35.0%
TTTAACCATGGCAATTAGTC+AGG + Chr1:2353336-2353355 MsG0180000172.01.T01:intron 35.0%
! AATTCTTTTGCTTCTCCTCA+CGG - Chr1:2349441-2349460 None:intergenic 35.0%
! AGCCATCAAGTTTTCTCATA+TGG - Chr1:2350277-2350296 None:intergenic 35.0%
! ATAGTTGGCTTATCAGGAAT+CGG + Chr1:2351429-2351448 MsG0180000172.01.T01:intron 35.0%
! CATCAAGTTTTCTCATATGG+AGG - Chr1:2350274-2350293 None:intergenic 35.0%
! CATTTGGGTCCATTCAATTT+TGG - Chr1:2352918-2352937 None:intergenic 35.0%
! GAACCAAAAGAGCATAACAA+TGG + Chr1:2354548-2354567 MsG0180000172.01.T01:intron 35.0%
! GATTGAATGGTTTTTGTCTC+TGG - Chr1:2355476-2355495 None:intergenic 35.0%
! GCTTTCTAAAGAGAAAGCAT+GGG + Chr1:2357562-2357581 MsG0180000172.01.T01:CDS 35.0%
! GGGAGGTCAATATAATTTTG+AGG + Chr1:2353156-2353175 MsG0180000172.01.T01:intron 35.0%
! GTACCGAGTCAATTAACTTT+TGG + Chr1:2354010-2354029 MsG0180000172.01.T01:intron 35.0%
! GTTCAAGGACATTGTACTTT+TGG - Chr1:2351358-2351377 None:intergenic 35.0%
! TCTAGTACATGACACTTTTC+TGG + Chr1:2354958-2354977 MsG0180000172.01.T01:intron 35.0%
! TGACCTCTGTCTTTTTAATG+TGG + Chr1:2354774-2354793 MsG0180000172.01.T01:intron 35.0%
! TGATGAACCTAAAATGGGTT+GGG + Chr1:2357436-2357455 MsG0180000172.01.T01:CDS 35.0%
! TGTGATTAGTTCAGAACTAG+TGG - Chr1:2356210-2356229 None:intergenic 35.0%
! TGTTATGTTGTGTCGTTAGA+TGG + Chr1:2356729-2356748 MsG0180000172.01.T01:intron 35.0%
! TTTCTCTTTAGAAAGCCGAT+CGG - Chr1:2357558-2357577 None:intergenic 35.0%
! TTTGGTTCATTGTTGTCACT+TGG - Chr1:2354536-2354555 None:intergenic 35.0%
! TTTTTGCGCTCTTTTCATAG+GGG + Chr1:2351539-2351558 MsG0180000172.01.T01:intron 35.0%
!! AAAGTGTCTGTTTTCAGCTT+AGG + Chr1:2355721-2355740 MsG0180000172.01.T01:intron 35.0%
!! ACTCTACTGACTTATACACT+AGG - Chr1:2352209-2352228 None:intergenic 35.0%
!! AGTTGTTCCATTTTGAAGAG+TGG - Chr1:2350036-2350055 None:intergenic 35.0%
!! CCAGATAATGGTGCAATTTT+TGG + Chr1:2349277-2349296 MsG0180000172.01.T01:CDS 35.0%
!! CTCTACTGACTTATACACTA+GGG - Chr1:2352208-2352227 None:intergenic 35.0%
!! CTTCTTTTAGCTACAAACTC+TGG - Chr1:2348960-2348979 None:intergenic 35.0%
!! GAAATTAGGGTTTGAGTTGT+AGG - Chr1:2348417-2348436 None:intergenic 35.0%
!! TGTTGATTCAATTGCCAAGT+CGG + Chr1:2357217-2357236 MsG0180000172.01.T01:CDS 35.0%
!! TTAATTGCTGTTTGAGGTAC+AGG - Chr1:2353059-2353078 None:intergenic 35.0%
!! TTCAACGCATTAACTTGTTC+TGG - Chr1:2356775-2356794 None:intergenic 35.0%
!!! CATATTTTAGCTCCGATTAC+AGG + Chr1:2352045-2352064 MsG0180000172.01.T01:intron 35.0%
!!! TATAGTCTCCGGTAGTTTTT+TGG - Chr1:2350501-2350520 None:intergenic 35.0%
AACCCACACTTAAATGACAG+GGG + Chr1:2354901-2354920 MsG0180000172.01.T01:intron 40.0%
AAGAAGAACGCCGATGAAAA+CGG - Chr1:2355521-2355540 None:intergenic 40.0%
AATGATTGTAATGGTAGGGG+AGG + Chr1:2353078-2353097 MsG0180000172.01.T01:intron 40.0%
ACATTGATCGTGTCCTTTCT+GGG + Chr1:2349063-2349082 MsG0180000172.01.T01:five_prime_UTR 40.0%
AGAGGATGGCATAAAGATGA+AGG - Chr1:2350924-2350943 None:intergenic 40.0%
AGCTTTGCAATTTAGTCCCT+TGG + Chr1:2351951-2351970 MsG0180000172.01.T01:intron 40.0%
AGGGGAGAATCTTACAATTG+GGG - Chr1:2348501-2348520 None:intergenic 40.0%
ATAAAGGTAGGTCGAGTTCA+AGG - Chr1:2351373-2351392 None:intergenic 40.0%
ATCCTTAACATGTGCCCTTA+GGG + Chr1:2356587-2356606 MsG0180000172.01.T01:intron 40.0%
ATCTTACAATTGGGGGGAAA+TGG - Chr1:2348493-2348512 None:intergenic 40.0%
ATGCATGTACGCAGATACTA+CGG - Chr1:2350377-2350396 None:intergenic 40.0%
ATTGCAGGAAAACTCCTTCT+GGG + Chr1:2350587-2350606 MsG0180000172.01.T01:intron 40.0%
CAAAACCTGACTAATTGCCA+TGG - Chr1:2353344-2353363 None:intergenic 40.0%
CAATAATGAGATTACAGCGG+TGG + Chr1:2353565-2353584 MsG0180000172.01.T01:intron 40.0%
CACAGGTGAACAGGAAATTA+TGG - Chr1:2351829-2351848 None:intergenic 40.0%
CACTTAAGAGGAGCAAATGA+GGG - Chr1:2354594-2354613 None:intergenic 40.0%
CATCATAACCAGGATGTGAA+GGG - Chr1:2357619-2357638 None:intergenic 40.0%
CATCATTGCTCTTACTGATC+AGG + Chr1:2350895-2350914 MsG0180000172.01.T01:intron 40.0%
CATCCAGCTTATTAGATGTC+TGG + Chr1:2353408-2353427 MsG0180000172.01.T01:intron 40.0%
CATCTTTATGCCATCCTCTT+TGG + Chr1:2350925-2350944 MsG0180000172.01.T01:intron 40.0%
CATTATACACAGTCAGGGTA+TGG + Chr1:2349343-2349362 MsG0180000172.01.T01:CDS 40.0%
CCAAAAGCAGAGTCATAAGA+GGG - Chr1:2352652-2352671 None:intergenic 40.0%
CCAAATATTCACAGGTGAAC+AGG - Chr1:2351838-2351857 None:intergenic 40.0%
CCACCAGTTTCTTCTTTATC+AGG - Chr1:2350654-2350673 None:intergenic 40.0%
CCGAATAGCATCTACTGAAT+TGG - Chr1:2350790-2350809 None:intergenic 40.0%
CCTGATAAAGAAGAAACTGG+TGG + Chr1:2350651-2350670 MsG0180000172.01.T01:CDS 40.0%
CCTGTTCACCTGTGAATATT+TGG + Chr1:2351835-2351854 MsG0180000172.01.T01:intron 40.0%
CGGAAAACCTTAAAGTCAAC+TGG - Chr1:2355404-2355423 None:intergenic 40.0%
CGTATTTGCATCAACCTCAA+GGG + Chr1:2353136-2353155 MsG0180000172.01.T01:intron 40.0%
CTACAGATCTCACCTGTAAT+CGG - Chr1:2352060-2352079 None:intergenic 40.0%
CTAGGATGGATGAATGGTAA+CGG - Chr1:2352337-2352356 None:intergenic 40.0%
CTGAGATTCTGATTGGACAA+GGG + Chr1:2348824-2348843 MsG0180000172.01.T01:five_prime_UTR 40.0%
CTTCTGTTATCCCGATGAAT+CGG + Chr1:2356974-2356993 MsG0180000172.01.T01:intron 40.0%
CTTGGCATTATACACAGTCA+GGG + Chr1:2349338-2349357 MsG0180000172.01.T01:CDS 40.0%
GAACCAGACATCTAATAAGC+TGG - Chr1:2353414-2353433 None:intergenic 40.0%
GAATAAAGGTGACACATCCA+AGG - Chr1:2351971-2351990 None:intergenic 40.0%
GATGCTGGATTTCGTTACTA+TGG + Chr1:2353706-2353725 MsG0180000172.01.T01:CDS 40.0%
GATTAACCCTTCCTATGTTC+AGG + Chr1:2349861-2349880 MsG0180000172.01.T01:intron 40.0%
GATTCTGCTGAGATTCTGAT+TGG + Chr1:2348817-2348836 MsG0180000172.01.T01:five_prime_UTR 40.0%
GTAACCCACACTTAAATGAC+AGG + Chr1:2354899-2354918 MsG0180000172.01.T01:intron 40.0%
GTGATATCCAACAACTAAGG+AGG - Chr1:2352520-2352539 None:intergenic 40.0%
GTGTATAAGTCAGTAGAGTG+GGG + Chr1:2352210-2352229 MsG0180000172.01.T01:intron 40.0%
TAATTATTGTACTGCGCGTG+AGG + Chr1:2352967-2352986 MsG0180000172.01.T01:intron 40.0%
TAGATTGGCAAAACTCTTGG+CGG + Chr1:2357004-2357023 MsG0180000172.01.T01:intron 40.0%
TAGTCACTGTGTATAGTCTC+CGG - Chr1:2350512-2350531 None:intergenic 40.0%
TATCCTTAACATGTGCCCTT+AGG + Chr1:2356586-2356605 MsG0180000172.01.T01:intron 40.0%
TCACAAACCTCCTTAGTTGT+TGG + Chr1:2352510-2352529 MsG0180000172.01.T01:intron 40.0%
TCACATCTCACTTGAGAAGA+TGG - Chr1:2354159-2354178 None:intergenic 40.0%
TCACTTAAGAGGAGCAAATG+AGG - Chr1:2354595-2354614 None:intergenic 40.0%
TCATCCATCCTAGTGTCAAT+GGG + Chr1:2352344-2352363 MsG0180000172.01.T01:intron 40.0%
TCATGCTGCAAAGAGAACAA+TGG + Chr1:2357643-2357662 MsG0180000172.01.T01:CDS 40.0%
TCGTATTTGCATCAACCTCA+AGG + Chr1:2353135-2353154 MsG0180000172.01.T01:intron 40.0%
TCTGGCTAACACTAATGTGT+TGG + Chr1:2357058-2357077 MsG0180000172.01.T01:intron 40.0%
TCTTGGCATTATACACAGTC+AGG + Chr1:2349337-2349356 MsG0180000172.01.T01:CDS 40.0%
TGAAAATCATGTTGCTGCAC+TGG - Chr1:2351632-2351651 None:intergenic 40.0%
TGAAACTCGATCAAATGGCT+GGG - Chr1:2354647-2354666 None:intergenic 40.0%
TGATTGGACAAGGGAAATTG+TGG + Chr1:2348833-2348852 MsG0180000172.01.T01:five_prime_UTR 40.0%
TGCTGCTGCCAGAATAAAAT+AGG + Chr1:2352249-2352268 MsG0180000172.01.T01:intron 40.0%
TGTGTATGTACAAGGGGATA+CGG - Chr1:2353801-2353820 None:intergenic 40.0%
TGTTGGAGATGTTACAGGTA+TGG + Chr1:2357075-2357094 MsG0180000172.01.T01:intron 40.0%
TTCAGGTGATTAAATGGCAG+AGG - Chr1:2352595-2352614 None:intergenic 40.0%
TTCATCCATCCTAGTGTCAA+TGG + Chr1:2352343-2352362 MsG0180000172.01.T01:intron 40.0%
TTGAAACTCGATCAAATGGC+TGG - Chr1:2354648-2354667 None:intergenic 40.0%
TTGAATCAACACCTTGATCC+GGG - Chr1:2357208-2357227 None:intergenic 40.0%
TTGACACTAGGATGGATGAA+TGG - Chr1:2352343-2352362 None:intergenic 40.0%
TTGAGAGAGTTTCTGCAACT+AGG + Chr1:2357278-2357297 MsG0180000172.01.T01:CDS 40.0%
TTGCAATACTCCAAAGAGGA+TGG - Chr1:2350938-2350957 None:intergenic 40.0%
TTTAGCTACAAACTCTGGAC+TGG - Chr1:2348955-2348974 None:intergenic 40.0%
! AAACTCTGGACTGGAATCTA+AGG - Chr1:2348946-2348965 None:intergenic 40.0%
! AAGCTGTTGGTTGTGGTTAT+AGG + Chr1:2348368-2348387 MsG0180000172.01.T01:five_prime_UTR 40.0%
! AATGAGGCTCTGATACATAC+TGG - Chr1:2354451-2354470 None:intergenic 40.0%
! ATTCTTTTGCTTCTCCTCAC+GGG - Chr1:2349440-2349459 None:intergenic 40.0%
! CAAAGAATTGGCTCAGTTCT+TGG + Chr1:2349320-2349339 MsG0180000172.01.T01:CDS 40.0%
! CCAAGAGTTTTGCCAATCTA+GGG - Chr1:2357004-2357023 None:intergenic 40.0%
! GGCTAGTTCCAAATATTCAC+AGG - Chr1:2351846-2351865 None:intergenic 40.0%
! GGCTTTCTAAAGAGAAAGCA+TGG + Chr1:2357561-2357580 MsG0180000172.01.T01:CDS 40.0%
! GTTGATTCAATTGCCAAGTC+GGG + Chr1:2357218-2357237 MsG0180000172.01.T01:CDS 40.0%
! TAAAGAGGTCGTTGTTGTTC+TGG + Chr1:2357040-2357059 MsG0180000172.01.T01:intron 40.0%
! TATCTAGCCCAACCCATTTT+AGG - Chr1:2357446-2357465 None:intergenic 40.0%
! TGGTGTATAGTTGGCTTATC+AGG + Chr1:2351423-2351442 MsG0180000172.01.T01:intron 40.0%
! TTCGCTTTCTTTTCACCACA+CGG + Chr1:2355550-2355569 MsG0180000172.01.T01:CDS 40.0%
!! ACTGACATTGTTTTGTGCGA+CGG + Chr1:2355821-2355840 MsG0180000172.01.T01:intron 40.0%
!! ATTAGGGTTTGAGTTGTAGG+CGG - Chr1:2348414-2348433 None:intergenic 40.0%
!! GAGAGAAATTTGGGGCTTTT+GGG + Chr1:2349935-2349954 MsG0180000172.01.T01:intron 40.0%
!! GATTTACCTAGTTTCTGGTC+AGG + Chr1:2351686-2351705 MsG0180000172.01.T01:intron 40.0%
!! GGGCTTCTTGCTATTACTTT+GGG + Chr1:2351559-2351578 MsG0180000172.01.T01:intron 40.0%
!! TGAGAGAAATTTGGGGCTTT+TGG + Chr1:2349934-2349953 MsG0180000172.01.T01:intron 40.0%
!!! AGTGTTTTTTGTGTGGTGAC+TGG + Chr1:2353368-2353387 MsG0180000172.01.T01:intron 40.0%
!!! GCATTTGACTGGTGCTATTT+TGG + Chr1:2349825-2349844 MsG0180000172.01.T01:intron 40.0%
AACAACCATCCCAGGTAAAC+GGG - Chr1:2349119-2349138 None:intergenic 45.0%
ACACAATATCGACATCCGAG+AGG - Chr1:2357316-2357335 None:intergenic 45.0%
ACCATTCAATCACCGCATCT+CGG + Chr1:2355485-2355504 MsG0180000172.01.T01:CDS 45.0%
ACGAACCTTGTGACTGAGAA+TGG - Chr1:2355605-2355624 None:intergenic 45.0%
AGAGGGAGAGTTTCATGTTC+AGG - Chr1:2352612-2352631 None:intergenic 45.0%
AGCTCAGAAGATAGCTGCAT+TGG + Chr1:2353627-2353646 MsG0180000172.01.T01:CDS 45.0%
ATGATCCAGATACCAGCTTC+AGG - Chr1:2350617-2350636 None:intergenic 45.0%
ATTCAATTGCCAAGTCGGGT+GGG + Chr1:2357222-2357241 MsG0180000172.01.T01:CDS 45.0%
ATTTGCATCAACCTCAAGGG+AGG + Chr1:2353139-2353158 MsG0180000172.01.T01:intron 45.0%
CAACAACCATCCCAGGTAAA+CGG - Chr1:2349120-2349139 None:intergenic 45.0%
CACATTGATCGTGTCCTTTC+TGG + Chr1:2349062-2349081 MsG0180000172.01.T01:five_prime_UTR 45.0%
CAGTTGTTGATACGCTGTCT+AGG + Chr1:2348988-2349007 MsG0180000172.01.T01:five_prime_UTR 45.0%
CCATCATAACCAGGATGTGA+AGG - Chr1:2357620-2357639 None:intergenic 45.0%
CCCTAGATTGGCAAAACTCT+TGG + Chr1:2357001-2357020 MsG0180000172.01.T01:intron 45.0%
CCTTAAAGTCAACTGGATGG+AGG - Chr1:2355397-2355416 None:intergenic 45.0%
CCTTCACATCCTGGTTATGA+TGG + Chr1:2357617-2357636 MsG0180000172.01.T01:CDS 45.0%
CGATGTCATAGTTGCTGGTA+CGG + Chr1:2353520-2353539 MsG0180000172.01.T01:intron 45.0%
CGATTACAGGTGAGATCTGT+AGG + Chr1:2352058-2352077 MsG0180000172.01.T01:intron 45.0%
CGATTCATCGGGATAACAGA+AGG - Chr1:2356976-2356995 None:intergenic 45.0%
GAAAACCTGAAGCTGGTATC+TGG + Chr1:2350609-2350628 MsG0180000172.01.T01:CDS 45.0%
GAAATGTTAACCGGTGTCTC+GGG + Chr1:2355067-2355086 MsG0180000172.01.T01:intron 45.0%
GAAGCAGGTGAAAGGTCTAA+TGG + Chr1:2356837-2356856 MsG0180000172.01.T01:CDS 45.0%
GAATTCTGAGCTGAAGAAGC+AGG + Chr1:2356822-2356841 MsG0180000172.01.T01:CDS 45.0%
GATGTGGAGTCAATGTCAGA+TGG + Chr1:2357374-2357393 MsG0180000172.01.T01:CDS 45.0%
GATTGCAGGAAAACTCCTTC+TGG + Chr1:2350586-2350605 MsG0180000172.01.T01:intron 45.0%
GCATGAAGTCCATCATAACC+AGG - Chr1:2357629-2357648 None:intergenic 45.0%
GCCAAAAGCAGAGTCATAAG+AGG - Chr1:2352653-2352672 None:intergenic 45.0%
GCTGAGATTCTGATTGGACA+AGG + Chr1:2348823-2348842 MsG0180000172.01.T01:five_prime_UTR 45.0%
GCTGGATTTCGTTACTATGG+CGG + Chr1:2353709-2353728 MsG0180000172.01.T01:CDS 45.0%
GGAAATGTTAACCGGTGTCT+CGG + Chr1:2355066-2355085 MsG0180000172.01.T01:intron 45.0%
GGACAAGGGAAATTGTGGTT+TGG + Chr1:2348838-2348857 MsG0180000172.01.T01:five_prime_UTR 45.0%
GGGAGAATCTTACAATTGGG+GGG - Chr1:2348499-2348518 None:intergenic 45.0%
GGGGAGAATCTTACAATTGG+GGG - Chr1:2348500-2348519 None:intergenic 45.0%
GTGGAAATGAAGAAACCGTG+TGG - Chr1:2355568-2355587 None:intergenic 45.0%
TAATGAGATTACAGCGGTGG+TGG + Chr1:2353568-2353587 MsG0180000172.01.T01:intron 45.0%
TATAGAAGAGACCCGGATCA+AGG + Chr1:2357194-2357213 MsG0180000172.01.T01:CDS 45.0%
TCAACATCGTGTAACTCTGC+TGG + Chr1:2349382-2349401 MsG0180000172.01.T01:CDS 45.0%
TCAGACCATTCTCAGTCACA+AGG + Chr1:2355597-2355616 MsG0180000172.01.T01:CDS 45.0%
TCCTGTCTATAGAAGAGACC+CGG + Chr1:2357187-2357206 MsG0180000172.01.T01:CDS 45.0%
TCGTTAGAGTGACAGGAAGA+AGG + Chr1:2352309-2352328 MsG0180000172.01.T01:intron 45.0%
TCTAATGGAGAAGCTGCGTT+TGG + Chr1:2356852-2356871 MsG0180000172.01.T01:CDS 45.0%
TCTTGAGCAGCAGTTGAGAA+AGG - Chr1:2353688-2353707 None:intergenic 45.0%
TGAAACTTGTCAGCCCAGAA+AGG - Chr1:2349079-2349098 None:intergenic 45.0%
TGAATCGGTGAACCCTAGAT+TGG + Chr1:2356989-2357008 MsG0180000172.01.T01:intron 45.0%
TGACTGAATCTGGTGATTGC+AGG + Chr1:2350572-2350591 MsG0180000172.01.T01:intron 45.0%
TGCATGTACGCAGATACTAC+GGG - Chr1:2350376-2350395 None:intergenic 45.0%
TTCAGTAGATGCTATTCGGG+AGG + Chr1:2350791-2350810 MsG0180000172.01.T01:CDS 45.0%
TTCTCAGTCACAAGGTTCGT+TGG + Chr1:2355605-2355624 MsG0180000172.01.T01:intron 45.0%
TTTCGGTTCCGTCTGTATCA+GGG + Chr1:2349015-2349034 MsG0180000172.01.T01:five_prime_UTR 45.0%
! ACAACCAACAGCTTGATGAC+CGG - Chr1:2348362-2348381 None:intergenic 45.0%
! ACTGACTTATACACTAGGGC+AGG - Chr1:2352204-2352223 None:intergenic 45.0%
! AGGCTCTGATACATACTGGT+TGG - Chr1:2354447-2354466 None:intergenic 45.0%
! ATGCTTGTAGGGTGCTTAGA+TGG + Chr1:2353452-2353471 MsG0180000172.01.T01:intron 45.0%
! CCCTCTTATGACTCTGCTTT+TGG + Chr1:2352649-2352668 MsG0180000172.01.T01:intron 45.0%
! CCTCCATCCAGTTGACTTTA+AGG + Chr1:2355394-2355413 MsG0180000172.01.T01:intron 45.0%
! CTATTACTTTGGGAGACAGC+GGG + Chr1:2351569-2351588 MsG0180000172.01.T01:intron 45.0%
! CTCTTTTACCCTTCACATCC+TGG + Chr1:2357608-2357627 MsG0180000172.01.T01:CDS 45.0%
! GCCAAGAGTTTTGCCAATCT+AGG - Chr1:2357005-2357024 None:intergenic 45.0%
! GCTATTACTTTGGGAGACAG+CGG + Chr1:2351568-2351587 MsG0180000172.01.T01:intron 45.0%
! GGCTCTGATACATACTGGTT+GGG - Chr1:2354446-2354465 None:intergenic 45.0%
! GTTTTCATCGGCGTTCTTCT+TGG + Chr1:2355520-2355539 MsG0180000172.01.T01:CDS 45.0%
! TCAAGGCTCGGATCGATTTA+GGG + Chr1:2348776-2348795 MsG0180000172.01.T01:five_prime_UTR 45.0%
! TCTGTGATGTGTTGGTCTCA+AGG + Chr1:2351182-2351201 MsG0180000172.01.T01:intron 45.0%
! TGAGAAAATAGAGGGGGTGT+TGG + Chr1:2353112-2353131 MsG0180000172.01.T01:intron 45.0%
! TGCCCCTGTCATTTAAGTGT+GGG - Chr1:2354906-2354925 None:intergenic 45.0%
! TGCTTGTAGGGTGCTTAGAT+GGG + Chr1:2353453-2353472 MsG0180000172.01.T01:intron 45.0%
! TGTGCTAACTTGTGCCCTAA+GGG - Chr1:2356604-2356623 None:intergenic 45.0%
! TGTGCTTGGTGAGAAACACA+AGG + Chr1:2356912-2356931 MsG0180000172.01.T01:CDS 45.0%
! TTCAAGGCTCGGATCGATTT+AGG + Chr1:2348775-2348794 MsG0180000172.01.T01:five_prime_UTR 45.0%
! TTGAAGAGTGGTTTGGGGAA+TGG + Chr1:2349217-2349236 MsG0180000172.01.T01:CDS 45.0%
! TTGCCCCTGTCATTTAAGTG+TGG - Chr1:2354907-2354926 None:intergenic 45.0%
! TTGCTATAAAAGGCACGAGC+AGG - Chr1:2352758-2352777 None:intergenic 45.0%
! TTGTGCTAACTTGTGCCCTA+AGG - Chr1:2356605-2356624 None:intergenic 45.0%
! TTTACAGTTGCTGTTGCTCC+TGG + Chr1:2353497-2353516 MsG0180000172.01.T01:intron 45.0%
! TTTTAGATCGCGTTGCCGAT+CGG + Chr1:2357540-2357559 MsG0180000172.01.T01:CDS 45.0%
! TTTTCGGTTCCGTCTGTATC+AGG + Chr1:2349014-2349033 MsG0180000172.01.T01:five_prime_UTR 45.0%
!! AAAATAGGGTGGGTTACGGT+TGG + Chr1:2352992-2353011 MsG0180000172.01.T01:intron 45.0%
!! AAACACAAGGCTGGTCCTTT+TGG + Chr1:2356925-2356944 MsG0180000172.01.T01:CDS 45.0%
!! AATTTGGGGCTTTTGGGCAT+AGG + Chr1:2349941-2349960 MsG0180000172.01.T01:intron 45.0%
!! ACGGAACAGTTTGTTGTGCT+TGG + Chr1:2356898-2356917 MsG0180000172.01.T01:CDS 45.0%
!! ATTTGGGGCTTTTGGGCATA+GGG + Chr1:2349942-2349961 MsG0180000172.01.T01:intron 45.0%
!! GAGAATGGTCTGAGTTGATG+CGG - Chr1:2355590-2355609 None:intergenic 45.0%
!! GCAGATGTTGGTGTCAATTC+TGG + Chr1:2350741-2350760 MsG0180000172.01.T01:CDS 45.0%
!! GGACAAAATAGGGTGGGTTA+CGG + Chr1:2352988-2353007 MsG0180000172.01.T01:intron 45.0%
!! GGGAAATTGTGGTTTGGTAC+TGG + Chr1:2348844-2348863 MsG0180000172.01.T01:five_prime_UTR 45.0%
!! GGGGCTTCTTGCTATTACTT+TGG + Chr1:2351558-2351577 MsG0180000172.01.T01:intron 45.0%
!! TACGCTGTCTAGGACGTTTT+CGG + Chr1:2348998-2349017 MsG0180000172.01.T01:five_prime_UTR 45.0%
!! TCTAGGGTTCACCGATTCAT+CGG - Chr1:2356988-2357007 None:intergenic 45.0%
!! TGCTCGGCCATTTTATCCTT+TGG + Chr1:2353892-2353911 MsG0180000172.01.T01:intron 45.0%
!! TGTTCTGAGGAACAAGCAGT+AGG + Chr1:2350693-2350712 MsG0180000172.01.T01:CDS 45.0%
!! TTAGGGTTTGAGTTGTAGGC+GGG - Chr1:2348413-2348432 None:intergenic 45.0%
!! TTATAATATTTATATACTTT+AGG - Chr1:2356319-2356338 None:intergenic 5.0%
!!! AAAAGAATTTTTAAATTATA+AGG - Chr1:2354709-2354728 None:intergenic 5.0%
!!! TTTTTTTTACTAAAAATTAA+AGG - Chr1:2354332-2354351 None:intergenic 5.0%
AAAATTACACCGACCTCCCG+AGG + Chr1:2352445-2352464 MsG0180000172.01.T01:intron 50.0%
AACCGTCAGCAGCCAGATAA+TGG + Chr1:2349265-2349284 MsG0180000172.01.T01:CDS 50.0%
AACGCCGATGAAAACGGCAA+CGG - Chr1:2355515-2355534 None:intergenic 50.0%
AAGGTTCAGTTGACCCAGCT+AGG + Chr1:2350819-2350838 MsG0180000172.01.T01:CDS 50.0%
AATGGAGAAGCTGCGTTTGG+CGG + Chr1:2356855-2356874 MsG0180000172.01.T01:CDS 50.0%
ACGTTTACACATACCTCGGG+AGG - Chr1:2352461-2352480 None:intergenic 50.0%
ACTGCGCGTGAGGACAAAAT+AGG + Chr1:2352977-2352996 MsG0180000172.01.T01:intron 50.0%
AGAGCCTTGACAGTGCCAAA+AGG - Chr1:2356943-2356962 None:intergenic 50.0%
AGCTGGGTCAACTGAACCTT+GGG - Chr1:2350819-2350838 None:intergenic 50.0%
AGGTTACAGCGTTCTCCTCT+CGG + Chr1:2357298-2357317 MsG0180000172.01.T01:CDS 50.0%
AGGTTCAGTTGACCCAGCTA+GGG + Chr1:2350820-2350839 MsG0180000172.01.T01:CDS 50.0%
ATCTTCTGAGCTGTGACCTG+AGG - Chr1:2353619-2353638 None:intergenic 50.0%
ATGGTGGTCGTTAGAGTGAC+AGG + Chr1:2352302-2352321 MsG0180000172.01.T01:intron 50.0%
ATGTGCCAAGTACCAGCCAA+AGG - Chr1:2354477-2354496 None:intergenic 50.0%
ATTGATCTTAGGGGGCTGAG+AGG + Chr1:2349894-2349913 MsG0180000172.01.T01:intron 50.0%
CACCATTATCTGGCTGCTGA+CGG - Chr1:2349270-2349289 None:intergenic 50.0%
CGTTTACCTGGGATGGTTGT+TGG + Chr1:2349118-2349137 MsG0180000172.01.T01:CDS 50.0%
CTGCGCGTGAGGACAAAATA+GGG + Chr1:2352978-2352997 MsG0180000172.01.T01:intron 50.0%
CTTGGTGAGAAACACAAGGC+TGG + Chr1:2356916-2356935 MsG0180000172.01.T01:CDS 50.0%
GAGCTGAAGAAGCAGGTGAA+AGG + Chr1:2356829-2356848 MsG0180000172.01.T01:CDS 50.0%
GATTCAATTGCCAAGTCGGG+TGG + Chr1:2357221-2357240 MsG0180000172.01.T01:CDS 50.0%
GCAAGGAAAGGGTCATGCTA+CGG + Chr1:2356879-2356898 MsG0180000172.01.T01:CDS 50.0%
GCGTGAGGACAAAATAGGGT+GGG + Chr1:2352982-2353001 MsG0180000172.01.T01:intron 50.0%
GGCTATGGTGCAAACCATCA+CGG - Chr1:2351604-2351623 None:intergenic 50.0%
GGTGGTTCATGTGTAAGAGC+TGG + Chr1:2353586-2353605 MsG0180000172.01.T01:intron 50.0%
GTCATAGTTGCTGGTACGGA+CGG + Chr1:2353524-2353543 MsG0180000172.01.T01:intron 50.0%
GTTGTAGGCGGGAATAGAGA+AGG - Chr1:2348402-2348421 None:intergenic 50.0%
TACCAGCCAAAGGAGCAATG+AGG - Chr1:2354467-2354486 None:intergenic 50.0%
TAGCTGGGTCAACTGAACCT+TGG - Chr1:2350820-2350839 None:intergenic 50.0%
TCAACTGCTGCTCAAGATGC+TGG + Chr1:2353691-2353710 MsG0180000172.01.T01:CDS 50.0%
TCAGAGCCTCATTGCTCCTT+TGG + Chr1:2354458-2354477 MsG0180000172.01.T01:intron 50.0%
TCCGAGATGCGGTGATTGAA+TGG - Chr1:2355489-2355508 None:intergenic 50.0%
TCCGGGTCTCTTCTATAGAC+AGG - Chr1:2357191-2357210 None:intergenic 50.0%
TCTTCTGAGCTGTGACCTGA+GGG - Chr1:2353618-2353637 None:intergenic 50.0%
TGAGGAACAAGCAGTAGGAG+TGG + Chr1:2350698-2350717 MsG0180000172.01.T01:CDS 50.0%
TTAACAGTGTCCCGAGACAC+CGG - Chr1:2355080-2355099 None:intergenic 50.0%
TTACACATACCTCGGGAGGT+CGG - Chr1:2352457-2352476 None:intergenic 50.0%
TTGCTCCTTTGGCTGGTACT+TGG + Chr1:2354469-2354488 MsG0180000172.01.T01:intron 50.0%
TTTGTGTGGTGACTGGAGTC+TGG + Chr1:2353375-2353394 MsG0180000172.01.T01:intron 50.0%
! AAGAGTGGTTTGGGGAATGG+TGG + Chr1:2349220-2349239 MsG0180000172.01.T01:CDS 50.0%
! ATCTGGAGCCCATTGACACT+AGG - Chr1:2352355-2352374 None:intergenic 50.0%
! CTTCTGGGAAAACCTGAAGC+TGG + Chr1:2350602-2350621 MsG0180000172.01.T01:CDS 50.0%
! CTTTTTCCAGCACCCTAGCT+GGG - Chr1:2350835-2350854 None:intergenic 50.0%
! GGTCATCAAGCTGTTGGTTG+TGG + Chr1:2348361-2348380 MsG0180000172.01.T01:five_prime_UTR 50.0%
! TAGCTGCATTGGCACGTCAA+CGG + Chr1:2353638-2353657 MsG0180000172.01.T01:CDS 50.0%
! TGCCCTAAGGGCACATGTTA+AGG - Chr1:2356592-2356611 None:intergenic 50.0%
! TGGTCCTTTTGGCACTGTCA+AGG + Chr1:2356936-2356955 MsG0180000172.01.T01:CDS 50.0%
!! AAAGGTTGATGCCTCGACAC+CGG - Chr1:2355216-2355235 None:intergenic 50.0%
!! AATGGTCTGAGTTGATGCGG+TGG - Chr1:2355587-2355606 None:intergenic 50.0%
!! CAGCTTCAGGTTTTCCCAGA+AGG - Chr1:2350604-2350623 None:intergenic 50.0%
!! CTAGGGTTCACCGATTCATC+GGG - Chr1:2356987-2357006 None:intergenic 50.0%
!! GATAACTCGACTCTGAAGCG+TGG + Chr1:2349154-2349173 MsG0180000172.01.T01:CDS 50.0%
!! GGCATTTTTAACCGGTGTCG+AGG + Chr1:2355202-2355221 MsG0180000172.01.T01:intron 50.0%
!! TTTGGGGCTTTTGGGCATAG+GGG + Chr1:2349943-2349962 MsG0180000172.01.T01:intron 50.0%
!!! ATCGCCGTTGCCGTTTTCAT+CGG + Chr1:2355508-2355527 MsG0180000172.01.T01:CDS 50.0%
AACCCCAGGACGCACAAACA+GGG - Chr1:2348922-2348941 None:intergenic 55.0%
AACCCTGTTTGTGCGTCCTG+GGG + Chr1:2348917-2348936 MsG0180000172.01.T01:five_prime_UTR 55.0%
ACAATGGCTGCCCGTTTACC+TGG + Chr1:2349106-2349125 MsG0180000172.01.T01:exon 55.0%
ACTGGTTGGGAGCTTCCCTT+GGG - Chr1:2354433-2354452 None:intergenic 55.0%
AGCATGATTCCCACCCGACT+TGG - Chr1:2357234-2357253 None:intergenic 55.0%
AGCCTCATTGCTCCTTTGGC+TGG + Chr1:2354462-2354481 MsG0180000172.01.T01:intron 55.0%
ATCGACGGCCCTGATACAGA+CGG - Chr1:2349026-2349045 None:intergenic 55.0%
CAACCCTGTTTGTGCGTCCT+GGG + Chr1:2348916-2348935 MsG0180000172.01.T01:five_prime_UTR 55.0%
CAAGCAGTAGGAGTGGCAGA+TGG + Chr1:2350705-2350724 MsG0180000172.01.T01:CDS 55.0%
CAATGGCTGCCCGTTTACCT+GGG + Chr1:2349107-2349126 MsG0180000172.01.T01:exon 55.0%
CCAGCAACTATGACATCGCC+AGG - Chr1:2353518-2353537 None:intergenic 55.0%
CCTGGCGATGTCATAGTTGC+TGG + Chr1:2353515-2353534 MsG0180000172.01.T01:intron 55.0%
CCTTCACCAACAACCATCCC+AGG - Chr1:2349127-2349146 None:intergenic 55.0%
CGCGTGAGGACAAAATAGGG+TGG + Chr1:2352981-2353000 MsG0180000172.01.T01:intron 55.0%
CGTTTGGCGGAGCAAGGAAA+GGG + Chr1:2356868-2356887 MsG0180000172.01.T01:CDS 55.0%
CTGACCGGTCATCAAGCTGT+TGG + Chr1:2348355-2348374 MsG0180000172.01.T01:five_prime_UTR 55.0%
GCGGGTATGGTTATCCGTGA+TGG + Chr1:2351587-2351606 MsG0180000172.01.T01:intron 55.0%
GGAGCCCATTGACACTAGGA+TGG - Chr1:2352351-2352370 None:intergenic 55.0%
GGTGGGAATCATGCTGTCTC+TGG + Chr1:2357239-2357258 MsG0180000172.01.T01:CDS 55.0%
GTAGGAGTGGCAGATGGTGT+TGG + Chr1:2350711-2350730 MsG0180000172.01.T01:CDS 55.0%
! ACTTTGGGAGACAGCGGGTA+TGG + Chr1:2351574-2351593 MsG0180000172.01.T01:intron 55.0%
! AGCTGCATTGGCACGTCAAC+GGG + Chr1:2353639-2353658 MsG0180000172.01.T01:CDS 55.0%
! CATGTTGCTGCACTGGTGAC+TGG - Chr1:2351625-2351644 None:intergenic 55.0%
! CCTGGGATGGTTGTTGGTGA+AGG + Chr1:2349124-2349143 MsG0180000172.01.T01:CDS 55.0%
! CTGGAATCTAAGGCAACCCC+AGG - Chr1:2348936-2348955 None:intergenic 55.0%
! TACTGGTTGGGAGCTTCCCT+TGG - Chr1:2354434-2354453 None:intergenic 55.0%
!! AACGGGCTCTGGACAAAGAC+AGG + Chr1:2353656-2353675 MsG0180000172.01.T01:CDS 55.0%
!! ACTCGACTCTGAAGCGTGGT+CGG + Chr1:2349158-2349177 MsG0180000172.01.T01:CDS 55.0%
!! GCTTTTTCCAGCACCCTAGC+TGG - Chr1:2350836-2350855 None:intergenic 55.0%
!! TGTATCAGGGCCGTCGATTC+AGG + Chr1:2349028-2349047 MsG0180000172.01.T01:five_prime_UTR 55.0%
AAGCTGCGTTTGGCGGAGCA+AGG + Chr1:2356862-2356881 MsG0180000172.01.T01:CDS 60.0%
AGTTGACCCAGCTAGGGTGC+TGG + Chr1:2350826-2350845 MsG0180000172.01.T01:intron 60.0%
CAACCCCAGGACGCACAAAC+AGG - Chr1:2348923-2348942 None:intergenic 60.0%
CAACGGGCACGTCATGAGCA+GGG - Chr1:2349408-2349427 None:intergenic 60.0%
GCAACCCTGTTTGTGCGTCC+TGG + Chr1:2348915-2348934 MsG0180000172.01.T01:five_prime_UTR 60.0%
GCGTTTGGCGGAGCAAGGAA+AGG + Chr1:2356867-2356886 MsG0180000172.01.T01:CDS 60.0%
TCAACGGGCACGTCATGAGC+AGG - Chr1:2349409-2349428 None:intergenic 60.0%
TGCTATTCGGGAGGAGCCCA+AGG + Chr1:2350800-2350819 MsG0180000172.01.T01:CDS 60.0%
TTGCTTCTCCTCACGGGCAG+CGG - Chr1:2349434-2349453 None:intergenic 60.0%
! AAGAGCTGGCTTCAGCCCTC+AGG + Chr1:2353600-2353619 MsG0180000172.01.T01:intron 60.0%
! ATTGGCACGTCAACGGGCTC+TGG + Chr1:2353645-2353664 MsG0180000172.01.T01:CDS 60.0%
! GCTGCACTGGTGACTGGCTA+TGG - Chr1:2351619-2351638 None:intergenic 60.0%
! GGAGTGGCAGATGGTGTTGG+TGG + Chr1:2350714-2350733 MsG0180000172.01.T01:CDS 60.0%
!! GGCAGATGGTGTTGGTGGCT+GGG + Chr1:2350719-2350738 MsG0180000172.01.T01:CDS 60.0%
!! GTTGGTGGCTGGGCAGATGT+TGG + Chr1:2350729-2350748 MsG0180000172.01.T01:CDS 60.0%
!! TGGCAGATGGTGTTGGTGGC+TGG + Chr1:2350718-2350737 MsG0180000172.01.T01:CDS 60.0%
GGCAACGGCGATCCGAGATG+CGG - Chr1:2355500-2355519 None:intergenic 65.0%
GGCTGCCCGTTTACCTGGGA+TGG + Chr1:2349111-2349130 MsG0180000172.01.T01:CDS 65.0%
! CTCACGGGCAGCGGTGTCAA+CGG - Chr1:2349425-2349444 None:intergenic 65.0%
! TCACGGGCAGCGGTGTCAAC+GGG - Chr1:2349424-2349443 None:intergenic 65.0%
CGTTGACACCGCTGCCCGTG+AGG + Chr1:2349423-2349442 MsG0180000172.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 2348321 2357736 2348321 ID=MsG0180000172.01;Name=MsG0180000172.01
Chr1 mRNA 2348321 2357736 2348321 ID=MsG0180000172.01.T01;Parent=MsG0180000172.01;Name=MsG0180000172.01.T01;_AED=0.40;_eAED=0.41;_QI=686|0.28|0.25|1|0.85|0.75|8|0|626
Chr1 exon 2357092 2357736 2357092 ID=MsG0180000172.01.T01:exon:6631;Parent=MsG0180000172.01.T01
Chr1 exon 2356748 2356978 2356748 ID=MsG0180000172.01.T01:exon:6630;Parent=MsG0180000172.01.T01
Chr1 exon 2355443 2355618 2355443 ID=MsG0180000172.01.T01:exon:6629;Parent=MsG0180000172.01.T01
Chr1 exon 2353603 2353799 2353603 ID=MsG0180000172.01.T01:exon:6628;Parent=MsG0180000172.01.T01
Chr1 exon 2350594 2350841 2350594 ID=MsG0180000172.01.T01:exon:6627;Parent=MsG0180000172.01.T01
Chr1 exon 2349619 2349631 2349619 ID=MsG0180000172.01.T01:exon:6626;Parent=MsG0180000172.01.T01
Chr1 exon 2348608 2349479 2348608 ID=MsG0180000172.01.T01:exon:6625;Parent=MsG0180000172.01.T01
Chr1 exon 2348321 2348505 2348321 ID=MsG0180000172.01.T01:exon:6624;Parent=MsG0180000172.01.T01
Chr1 five_prime_UTR 2348321 2348505 2348321 ID=MsG0180000172.01.T01:five_prime_utr;Parent=MsG0180000172.01.T01
Chr1 five_prime_UTR 2348608 2349108 2348608 ID=MsG0180000172.01.T01:five_prime_utr;Parent=MsG0180000172.01.T01
Chr1 CDS 2349109 2349479 2349109 ID=MsG0180000172.01.T01:cds;Parent=MsG0180000172.01.T01
Chr1 CDS 2349619 2349631 2349619 ID=MsG0180000172.01.T01:cds;Parent=MsG0180000172.01.T01
Chr1 CDS 2350594 2350841 2350594 ID=MsG0180000172.01.T01:cds;Parent=MsG0180000172.01.T01
Chr1 CDS 2353603 2353799 2353603 ID=MsG0180000172.01.T01:cds;Parent=MsG0180000172.01.T01
Chr1 CDS 2355443 2355618 2355443 ID=MsG0180000172.01.T01:cds;Parent=MsG0180000172.01.T01
Chr1 CDS 2356748 2356978 2356748 ID=MsG0180000172.01.T01:cds;Parent=MsG0180000172.01.T01
Chr1 CDS 2357092 2357736 2357092 ID=MsG0180000172.01.T01:cds;Parent=MsG0180000172.01.T01
Gene Sequence

>MsG0180000172.01.T01

ATGGCTGCCCGTTTACCTGGGATGGTTGTTGGTGAAGGCTCTTTAGATAACTCGACTCTGAAGCGTGGTCGGAGTTTGTTGTCAACAAAGAGCAGCAATAGTGTGTATTTGAAGAGTGGTTTGGGGAATGGTGGAAAAGTGAGCATGTGTTTAAGTAACCGTCAGCAGCCAGATAATGGTGCAATTTTTGGATACTTTGTCTGTAATGCTGCAAAGAATTGGCTCAGTTCTTGGCATTATACACAGTCAGGGTATGGAGATTTACATAGTTTTTCAACATCGTGTAACTCTGCTGGCCCTGCTCATGACGTGCCCGTTGACACCGCTGCCCGTGAGGAGAAGCAAAAGAATTCTGCCGATTCATCTGAACTTTTGACTGTTGGAGAAAACTCCTTCTGGGAAAACCTGAAGCTGGTATCTGGATCATGCTACTTGCCTCATCCTGATAAAGAAGAAACTGGTGGAGAAGATGCTCATTTTATATGTTCTGAGGAACAAGCAGTAGGAGTGGCAGATGGTGTTGGTGGCTGGGCAGATGTTGGTGTCAATTCTGGATATTACTCTCGTGAGCTCATGTCCAATTCAGTAGATGCTATTCGGGAGGAGCCCAAGGTTCAGTTGACCCAGCTAGGAGCTGGCTTCAGCCCTCAGGTCACAGCTCAGAAGATAGCTGCATTGGCACGTCAACGGGCTCTGGACAAAGACAGGCAGACTCCTTTCTCAACTGCTGCTCAAGATGCTGGATTTCGTTACTATGGCGGCAAGCTTGATGACACCACAGTTGTAGTTTCATATATTACTGGTTCTGGTTGCATAGATTCGTTTTGCCCAATGGCAGGTCGCAGAGATGCGTTGCTTACCAGAGACAAAAACCATTCAATCACCGCATCTCGGATCGCCGTTGCCGTTTTCATCGGCGTTCTTCTTGGTTGCATCTTCGCTTTCTTTTCACCACACGGTTTCTTCATTTCCACCGCATCAACTCAGACCATTCTCAGTCACAAGATGGTTTCGACAGAGTGTGAATCGCCAGAACAAGTTAATGCGTTGAAATTGAATATTCAATCAGCTAAAGAGAAGAATTCTGAGCTGAAGAAGCAGGTGAAAGGTCTAATGGAGAAGCTGCGTTTGGCGGAGCAAGGAAAGGGTCATGCTACGGAACAGTTTGTTGTGCTTGGTGAGAAACACAAGGCTGGTCCTTTTGGCACTGTCAAGGCTCTCAGAACAAATCCTTCTGTATGGTTCACCAATATCAAGAAAGTTGGCATATCTAATTATTTGGTTGTTGCATTAGATGACAGAATTGAAGAGTTTTGTAAGTCAAATGATGTTCCTGTCTATAGAAGAGACCCGGATCAAGGTGTTGATTCAATTGCCAAGTCGGGTGGGAATCATGCTGTCTCTGGATTGAAATTTCGCATTTTGAGAGAGTTTCTGCAACTAGGTTACAGCGTTCTCCTCTCGGATGTCGATATTGTGTATTTGCAGAACCCCTTTGATTATATTTATAGGGATTCAGATGTGGAGTCAATGTCAGATGGTCATAGCAATCATACAGCTTATGGATTTAACGATGTCTTTGATGAACCTAAAATGGGTTGGGCTAGATATGCTCATACCATGAGAATATGGGTATATAACTCTGGCTTTTTTTACATAAGACCAACAATTCCTTCAATTGAGCTTTTAGATCGCGTTGCCGATCGGCTTTCTAAAGAGAAAGCATGGGATCAAGCAGTTTTTAATGAAGAACTCTTTTACCCTTCACATCCTGGTTATGATGGACTTCATGCTGCAAAGAGAACAATGGATATGTACCTTTTTATGAACAGTAAGGTTCTGTTTAAGACTGTGAGAAAGATGCTAAGCTCAAAAAGTTGA
Protein sequence

>MsG0180000172.01.T01

MAARLPGMVVGEGSLDNSTLKRGRSLLSTKSSNSVYLKSGLGNGGKVSMCLSNRQQPDNGAIFGYFVCNAAKNWLSSWHYTQSGYGDLHSFSTSCNSAGPAHDVPVDTAAREEKQKNSADSSELLTVGENSFWENLKLVSGSCYLPHPDKEETGGEDAHFICSEEQAVGVADGVGGWADVGVNSGYYSRELMSNSVDAIREEPKVQLTQLGAGFSPQVTAQKIAALARQRALDKDRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYITGSGCIDSFCPMAGRRDALLTRDKNHSITASRIAVAVFIGVLLGCIFAFFSPHGFFISTASTQTILSHKMVSTECESPEQVNALKLNIQSAKEKNSELKKQVKGLMEKLRLAEQGKGHATEQFVVLGEKHKAGPFGTVKALRTNPSVWFTNIKKVGISNYLVVALDDRIEEFCKSNDVPVYRRDPDQGVDSIAKSGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDYIYRDSDVESMSDGHSNHTAYGFNDVFDEPKMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVADRLSKEKAWDQAVFNEELFYPSHPGYDGLHAAKRTMDMYLFMNSKVLFKTVRKMLSSKS*