AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003494.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003494.01.T01 MTR_1g063020 84.825 257 2 1 1 220 1 257 1.89e-154 433
MsG0180003494.01.T01 MTR_7g102260 71.032 252 36 1 6 220 3 254 8.20e-127 363
MsG0180003494.01.T01 MTR_4g057450 60.232 259 64 2 6 225 16 274 4.25e-102 301
MsG0180003494.01.T01 MTR_2g095800 54.373 263 73 2 2 217 6 268 8.89e-91 272
MsG0180003494.01.T01 MTR_1g033420 37.395 238 102 5 5 204 7 235 2.82e-41 145
MsG0180003494.01.T01 MTR_5g029100 36.893 206 92 3 37 204 39 244 6.73e-39 140
MsG0180003494.01.T01 MTR_8g064180 33.333 240 121 4 1 202 8 246 4.15e-37 134
MsG0180003494.01.T01 MTR_5g029100 36.994 173 73 2 68 204 41 213 1.75e-32 122
MsG0180003494.01.T01 MTR_1g105900 33.333 225 109 6 32 218 26 247 5.22e-32 120
MsG0180003494.01.T01 MTR_8g090100 35.122 205 94 5 37 202 18 222 9.99e-32 120
MsG0180003494.01.T01 MTR_5g091730 35.533 197 89 4 61 222 51 244 1.72e-30 116
MsG0180003494.01.T01 MTR_7g084770 35.071 211 97 5 31 204 23 230 1.93e-30 116
MsG0180003494.01.T01 MTR_7g084750 35.407 209 94 6 40 210 32 237 5.23e-30 115
MsG0180003494.01.T01 MTR_7g084760 35.644 202 90 5 40 204 32 230 1.05e-29 114
MsG0180003494.01.T01 MTR_4g128400 35.751 193 84 4 48 203 36 225 1.38e-29 114
MsG0180003494.01.T01 MTR_3g089540 34.071 226 107 5 33 219 23 245 1.42e-29 114
MsG0180003494.01.T01 MTR_6g033085 33.186 226 109 6 40 228 32 252 3.39e-29 113
MsG0180003494.01.T01 MTR_8g081040 35.176 199 89 4 39 200 30 225 4.85e-29 112
MsG0180003494.01.T01 MTR_7g093530 34.328 201 92 4 39 202 23 220 1.04e-28 111
MsG0180003494.01.T01 MTR_8g102910 35.263 190 85 3 48 202 30 216 4.70e-28 109
MsG0180003494.01.T01 MTR_4g128570 34.146 205 95 5 39 206 30 231 6.19e-28 109
MsG0180003494.01.T01 MTR_4g128410 33.831 201 93 4 39 202 24 221 6.56e-28 109
MsG0180003494.01.T01 MTR_6g033055 32.301 226 111 6 40 228 32 252 1.35e-27 108
MsG0180003494.01.T01 MTR_6g088320 33.684 190 88 3 48 202 34 220 1.59e-27 108
MsG0180003494.01.T01 MTR_4g045853 31.651 218 105 4 48 230 35 243 2.40e-27 108
MsG0180003494.01.T01 MTR_2g038860 32.338 201 96 4 39 202 25 222 6.01e-27 107
MsG0180003494.01.T01 MTR_2g038705 32.338 201 96 4 39 202 25 222 6.01e-27 107
MsG0180003494.01.T01 MTR_2g089140 30.303 231 117 5 35 230 20 241 9.13e-27 106
MsG0180003494.01.T01 MTR_1g105495 32.178 202 98 5 39 202 34 234 1.11e-26 106
MsG0180003494.01.T01 MTR_3g084630 33.333 201 94 4 37 200 25 222 2.01e-26 105
MsG0180003494.01.T01 MTR_3g084620 33.333 201 94 4 37 200 25 222 2.39e-26 105
MsG0180003494.01.T01 MTR_7g056090 33.193 238 106 8 7 208 11 231 2.70e-26 105
MsG0180003494.01.T01 MTR_8g013055 32.456 228 113 6 34 225 25 247 3.89e-26 104
MsG0180003494.01.T01 MTR_4g128580 32.692 208 100 4 30 200 16 220 4.44e-26 104
MsG0180003494.01.T01 MTR_4g126920 31.731 208 101 5 34 203 18 222 7.79e-26 103
MsG0180003494.01.T01 MTR_4g097640 32.353 204 99 4 36 202 28 229 4.53e-25 102
MsG0180003494.01.T01 MTR_4g097670 32.353 204 99 4 36 202 28 229 4.53e-25 102
MsG0180003494.01.T01 MTR_4g097700 32.338 201 97 4 39 202 68 266 1.89e-24 100
MsG0180003494.01.T01 MTR_1g063000 97.561 41 1 0 241 281 3 43 3.55e-22 88.6
MsG0180003494.01.T01 MTR_1g063000 97.561 41 1 0 241 281 3 43 3.92e-22 88.6
MsG0180003494.01.T01 MTR_8g102220 31.461 178 82 4 39 179 28 202 6.12e-21 90.5
MsG0180003494.01.T01 MTR_2g049130 27.941 204 106 7 37 204 26 224 5.75e-16 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003494.01.T01 AT2G36870 69.565 253 40 1 5 220 8 260 9.05e-122 351
MsG0180003494.01.T01 AT3G44990 57.025 242 64 3 1 204 1 240 1.30e-88 266
MsG0180003494.01.T01 AT2G36870 79.433 141 29 0 8 148 11 151 4.27e-77 233
MsG0180003494.01.T01 AT1G32170 38.095 210 92 3 33 204 25 234 4.63e-39 140
MsG0180003494.01.T01 AT1G14720 36.585 205 92 3 38 204 29 233 5.74e-38 137
MsG0180003494.01.T01 AT1G10550 30.996 271 147 5 6 238 10 278 7.09e-38 136
MsG0180003494.01.T01 AT2G01850 37.129 202 89 3 39 202 30 231 2.26e-36 133
MsG0180003494.01.T01 AT4G18990 36.893 206 92 3 40 207 40 245 9.34e-36 132
MsG0180003494.01.T01 AT3G25050 34.500 200 94 3 38 203 33 229 1.06e-34 127
MsG0180003494.01.T01 AT4G14130 33.191 235 115 5 39 236 27 256 1.30e-31 119
MsG0180003494.01.T01 AT3G23730 33.193 238 118 5 37 236 24 258 1.49e-31 119
MsG0180003494.01.T01 AT5G13870 30.962 239 114 5 1 204 8 230 1.75e-29 114
MsG0180003494.01.T01 AT5G13870 30.962 239 114 5 1 204 8 230 1.75e-29 114
MsG0180003494.01.T01 AT5G13870 30.962 239 114 5 1 204 8 230 1.75e-29 114
MsG0180003494.01.T01 AT5G57550 31.148 244 119 6 7 213 6 237 2.06e-29 113
MsG0180003494.01.T01 AT4G13090 32.906 234 109 5 5 202 6 227 2.37e-29 113
MsG0180003494.01.T01 AT1G11545 33.641 217 96 7 37 212 35 244 2.43e-29 114
MsG0180003494.01.T01 AT2G06850 34.894 235 104 8 31 225 26 251 2.49e-29 113
MsG0180003494.01.T01 AT5G57530 32.589 224 111 5 35 221 22 242 9.87e-29 111
MsG0180003494.01.T01 AT5G65730 32.075 212 105 5 36 210 31 240 1.15e-28 111
MsG0180003494.01.T01 AT4G03210 33.498 203 97 3 35 202 24 223 1.26e-28 111
MsG0180003494.01.T01 AT4G13080 31.557 244 123 7 1 208 4 239 5.85e-27 107
MsG0180003494.01.T01 AT4G37800 33.333 204 97 4 36 202 30 231 2.19e-26 105
MsG0180003494.01.T01 AT2G06850 38.506 174 65 5 68 204 5 173 2.94e-26 103
MsG0180003494.01.T01 AT5G48070 31.535 241 103 7 2 203 10 227 3.05e-26 105
MsG0180003494.01.T01 AT5G57560 33.333 204 94 6 37 202 20 219 7.75e-26 103
MsG0180003494.01.T01 AT4G30270 34.328 201 92 5 35 198 19 216 8.69e-26 103
MsG0180003494.01.T01 AT4G30280 35.751 193 80 5 69 225 61 245 1.24e-25 103
MsG0180003494.01.T01 AT5G57540 32.524 206 99 5 39 207 25 227 1.66e-25 103
MsG0180003494.01.T01 AT2G14620 32.203 236 112 7 4 202 9 233 3.24e-25 102
MsG0180003494.01.T01 AT4G30290 35.519 183 78 4 69 215 56 234 3.60e-25 102
MsG0180003494.01.T01 AT4G25810 34.466 206 93 7 37 204 23 224 5.54e-25 101
MsG0180003494.01.T01 AT4G25820 33.503 197 91 5 39 198 29 222 5.94e-25 101
MsG0180003494.01.T01 AT1G65310 38.235 170 65 5 69 202 83 248 6.65e-25 102
MsG0180003494.01.T01 AT1G65310 38.235 170 65 5 69 202 61 226 7.93e-25 101
MsG0180003494.01.T01 AT4G28850 32.632 190 90 3 48 202 37 223 5.28e-24 99.4
MsG0180003494.01.T01 AT4G03210 33.929 168 73 3 70 202 31 195 2.13e-23 97.1
MsG0180003494.01.T01 AT2G18800 31.122 196 95 5 48 206 36 228 1.32e-22 95.5
MsG0180003494.01.T01 AT4G18990 36.429 140 53 2 104 207 32 171 1.04e-20 90.1
MsG0180003494.01.T01 AT2G14620 33.136 169 75 4 69 202 18 183 1.81e-20 88.6
MsG0180003494.01.T01 AT3G48580 35.028 177 84 7 42 202 36 197 5.46e-20 87.4
MsG0180003494.01.T01 AT3G48580 31.472 197 84 7 42 202 36 217 5.17e-17 79.7
MsG0180003494.01.T01 AT5G03460 58.537 41 17 0 241 281 3 43 2.99e-13 64.7

Find 158 sgRNAs with CRISPR-Local

Find 476 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACCTCATACTTGATTATT+AGG 0.093481 1:-63200332 MsG0180003494.01.T01:three_prime_UTR
CTAAGACCAATGTGGGTTTA+TGG 0.178750 1:-63205481 MsG0180003494.01.T01:CDS
CTTCCTTGGGTACCTCCTTA+TGG 0.183924 1:+63205522 None:intergenic
GGCCACCTTCCCCTGGTTAC+TGG 0.192690 1:-63207334 MsG0180003494.01.T01:CDS
TGTGGGTTTATGGTTCTATT+TGG 0.204208 1:-63205471 MsG0180003494.01.T01:CDS
ATTTCGATTTCGATTTAATT+AGG 0.205348 1:-63200926 MsG0180003494.01.T01:three_prime_UTR
TGTTGTTGTTCTATTATAAT+TGG 0.219332 1:-63200463 MsG0180003494.01.T01:three_prime_UTR
ATTCGGCACTGGACTATAAT+TGG 0.229045 1:-63200422 MsG0180003494.01.T01:three_prime_UTR
ATCAACATGGAACAACAATT+TGG 0.259205 1:-63207235 MsG0180003494.01.T01:CDS
TTCCTTGGGTACCTCCTTAT+GGG 0.266893 1:+63205523 None:intergenic
GGGAAAATCTATGCGGCTTT+TGG 0.275103 1:-63201146 MsG0180003494.01.T01:CDS
CTATAATTGGTGAAATAATA+AGG 0.279979 1:-63200409 MsG0180003494.01.T01:three_prime_UTR
AACCTCATACTTGATTATTA+GGG 0.297686 1:-63200331 MsG0180003494.01.T01:three_prime_UTR
CAATGGTTATAGAAACCTTT+GGG 0.298310 1:-63207279 MsG0180003494.01.T01:CDS
ACATTTGTCTGCAAAGTATA+AGG 0.303238 1:+63206692 None:intergenic
CTTATTTCTTGAATTGTTAT+CGG 0.307272 1:+63200794 None:intergenic
CAAGTGCGTGGATTATGTTT+TGG 0.307946 1:-63200081 MsG0180003494.01.T01:three_prime_UTR
ATCTGCTTCATCTACATTCC+AGG 0.325686 1:+63199874 None:intergenic
CTCCTTCAAGCAATGCCTAT+TGG 0.339681 1:-63207355 MsG0180003494.01.T01:CDS
GAAGTAGACATTGAATTTCT+AGG 0.341397 1:-63206731 MsG0180003494.01.T01:CDS
AAGTTACCTACCTTTGTTCA+TGG 0.344414 1:-63207420 MsG0180003494.01.T01:exon
TAGATGAAGCAGATTTAATC+TGG 0.344885 1:-63199865 MsG0180003494.01.T01:three_prime_UTR
AATTGTTAAGAAATATTTAG+AGG 0.348977 1:-63200586 MsG0180003494.01.T01:three_prime_UTR
TATAGGTTGCTTGGTTTGTT+TGG 0.350591 1:-63201305 MsG0180003494.01.T01:intron
TCTTCCTCTCCTCTAGTGAT+TGG 0.351091 1:+63200626 None:intergenic
TGTAGTCAACCCCACATAAT+AGG 0.351804 1:-63200498 MsG0180003494.01.T01:three_prime_UTR
GTGGGTTTATGGTTCTATTT+GGG 0.354310 1:-63205470 MsG0180003494.01.T01:CDS
TCAAATCAACATCAAGCATT+TGG 0.354447 1:+63200276 None:intergenic
CAGACAAATGTTTATATAAG+AGG 0.361231 1:-63206680 MsG0180003494.01.T01:CDS
CGTCAATAGCATTATAGTAT+TGG 0.369161 1:-63200988 MsG0180003494.01.T01:three_prime_UTR
CGATTTCGATTTAATTAGGT+TGG 0.371805 1:-63200922 MsG0180003494.01.T01:three_prime_UTR
ATATTTAGAGGTCAATTGTT+TGG 0.377157 1:-63200574 MsG0180003494.01.T01:three_prime_UTR
AACATAATCCACGCACTTGT+TGG 0.377922 1:+63200085 None:intergenic
CCAGTGCCGAATAAAACTTA+TGG 0.385036 1:+63200433 None:intergenic
GAATTTCTAGGGACAACATT+TGG 0.388283 1:-63206719 MsG0180003494.01.T01:CDS
TTCCATGTTGATCCATGCTT+TGG 0.388299 1:+63207246 None:intergenic
ATACAGAATACATCTTTAAG+AGG 0.393481 1:+63200168 None:intergenic
AATGTTGCATCACTCTTCCT+TGG 0.393842 1:+63205508 None:intergenic
TAAAGATGTATTCTGTATAA+AGG 0.397614 1:-63200163 MsG0180003494.01.T01:three_prime_UTR
ACAATGGTTATAGAAACCTT+TGG 0.410802 1:-63207280 MsG0180003494.01.T01:CDS
AACAACCAAAGGATCATATC+TGG 0.413727 1:+63200123 None:intergenic
TTTGTGTACTTTGCAACAAA+AGG 0.422740 1:+63205391 None:intergenic
AACAACCAGATATGATCCTT+TGG 0.427680 1:-63200128 MsG0180003494.01.T01:three_prime_UTR
TACTCAGTGAAAGGTGCATA+TGG 0.429327 1:+63207511 None:intergenic
TAAACCCACATTGGTCTTAG+TGG 0.431879 1:+63205484 None:intergenic
ATCTACATTCCAGGTTTAGT+AGG 0.435633 1:+63199883 None:intergenic
TATTAGGGGTTGGACACCTT+CGG 0.436060 1:-63200316 MsG0180003494.01.T01:three_prime_UTR
CCAAGCTTTATCCTATTATG+TGG 0.437146 1:+63200487 None:intergenic
CCATTTCGATCGGGATACTT+TGG 0.438416 1:-63206958 MsG0180003494.01.T01:CDS
ACAAATTTCAATGTTATAGC+AGG 0.440188 1:-63199937 MsG0180003494.01.T01:three_prime_UTR
CGGCCACGGCCTCGCCGTAT+CGG 0.441815 1:-63205321 MsG0180003494.01.T01:CDS
GCATCGACATTTCAGATTGA+AGG 0.443167 1:+63200681 None:intergenic
TGCATCACGGTGGTGTCGTC+CGG 0.448578 1:-63205341 MsG0180003494.01.T01:CDS
GCCTATTGGCCACCTTCCCC+TGG 0.450220 1:-63207341 MsG0180003494.01.T01:CDS
GATTTCGATTTAATTAGGTT+GGG 0.462145 1:-63200921 MsG0180003494.01.T01:three_prime_UTR
CCAAAGTATCCCGATCGAAA+TGG 0.463082 1:+63206958 None:intergenic
ACATGCTGGAGAGCCCTCTC+TGG 0.463471 1:+63201107 None:intergenic
ACCAGGGGAAGGTGGCCAAT+AGG 0.463800 1:+63207340 None:intergenic
TTTCAATGTTATAGCAGGAC+GGG 0.464528 1:-63199932 MsG0180003494.01.T01:three_prime_UTR
ATTATAGTATTGGATAGAGT+AGG 0.477008 1:-63200978 MsG0180003494.01.T01:three_prime_UTR
CCTACAGAACCTACTAAACC+TGG 0.477673 1:-63199892 MsG0180003494.01.T01:three_prime_UTR
ATGTTGCATCACTCTTCCTT+GGG 0.478571 1:+63205509 None:intergenic
GGCCAATAGGCATTGCTTGA+AGG 0.480007 1:+63207353 None:intergenic
TCATCATGGGCAACAGAAGA+TGG 0.483074 1:-63205442 MsG0180003494.01.T01:CDS
TACAACACCAGCAGCATGAT+TGG 0.484402 1:-63200834 MsG0180003494.01.T01:three_prime_UTR
ACCCCTAATAATCAAGTATG+AGG 0.485299 1:+63200329 None:intergenic
ACGGTGGTGTCGTCCGGCCA+CGG 0.487364 1:-63205335 MsG0180003494.01.T01:CDS
TCTAACAATGAAGCGCATCC+AGG 0.493067 1:-63206764 MsG0180003494.01.T01:CDS
TTGGAACTTGGCCAGTAACC+AGG 0.493648 1:+63207323 None:intergenic
TCTACTTCATCATGAAATCC+TGG 0.494735 1:+63206746 None:intergenic
CATACTTGATTATTAGGGGT+TGG 0.497523 1:-63200326 MsG0180003494.01.T01:three_prime_UTR
CAAGCTTTATCCTATTATGT+GGG 0.498431 1:+63200488 None:intergenic
GAGGGAGAAAGTTAACGATT+GGG 0.501202 1:+63201266 None:intergenic
TTATAGTATTGGATAGAGTA+GGG 0.501766 1:-63200977 MsG0180003494.01.T01:three_prime_UTR
TGATATTCGTTTGACTGTCA+AGG 0.502032 1:-63200256 MsG0180003494.01.T01:three_prime_UTR
CTATTTGGGATGCTTCATCA+TGG 0.504142 1:-63205456 MsG0180003494.01.T01:CDS
AGAGGGAGAAAGTTAACGAT+TGG 0.504291 1:+63201265 None:intergenic
ATAGACCTGACTTTGGAACT+TGG 0.504684 1:+63207311 None:intergenic
CCAGGTTTAGTAGGTTCTGT+AGG 0.504731 1:+63199892 None:intergenic
ATTTGGCTTGATAGAACCTC+AGG 0.506453 1:-63207218 MsG0180003494.01.T01:intron
ATAACTCCTGCAGTGTAGCC+AGG 0.507404 1:+63206916 None:intergenic
AAGTAGACATTGAATTTCTA+GGG 0.508075 1:-63206730 MsG0180003494.01.T01:CDS
GATATTCGTTTGACTGTCAA+GGG 0.510023 1:-63200255 MsG0180003494.01.T01:three_prime_UTR
ACTGGCCAAGTTCCAAAGTC+AGG 0.515213 1:-63207316 MsG0180003494.01.T01:CDS
GCACATGATGGGAAAGCTCT+TGG 0.520060 1:-63204863 MsG0180003494.01.T01:CDS
GAAGGCTTAATAGGACATGC+TGG 0.522174 1:+63201093 None:intergenic
CTTCATCCTGGCTACACTGC+AGG 0.522870 1:-63206922 MsG0180003494.01.T01:CDS
TGAAATGTTTAACAATTATG+TGG 0.524141 1:-63201014 MsG0180003494.01.T01:three_prime_UTR
TAGTGGATGATATGCCCATA+AGG 0.525035 1:-63205537 MsG0180003494.01.T01:CDS
ATAGCAGGACGGGGCAATGT+TGG 0.526708 1:-63199922 MsG0180003494.01.T01:three_prime_UTR
ATTAGGTTGGGTATGTGTGA+AGG 0.528534 1:-63200909 MsG0180003494.01.T01:three_prime_UTR
CACGGCCTCGCCGTATCGGT+CGG 0.529624 1:-63205317 MsG0180003494.01.T01:intron
CGACCGATACGGCGAGGCCG+TGG 0.530477 1:+63205318 None:intergenic
AGCTAGAGAATAGAATCTAC+AGG 0.535907 1:+63200883 None:intergenic
CGATACGGCGAGGCCGTGGC+CGG 0.537351 1:+63205322 None:intergenic
GTCGAATCGTCCATTTCGAT+CGG 0.539068 1:-63206968 MsG0180003494.01.T01:CDS
AATGTTTATATAAGAGGGAG+TGG 0.539977 1:-63206674 MsG0180003494.01.T01:intron
AAAGCTCATAGACCTGACTT+TGG 0.542912 1:+63207304 None:intergenic
AGACAAATGTTTATATAAGA+GGG 0.545157 1:-63206679 MsG0180003494.01.T01:CDS
TCAATCAAACCTTGATGTAG+AGG 0.546537 1:+63199836 None:intergenic
TGATCCATGCTTTGGTGCTG+AGG 0.547528 1:+63207254 None:intergenic
TATTTGGGATGCTTCATCAT+GGG 0.549893 1:-63205455 MsG0180003494.01.T01:CDS
TCGAATCGTCCATTTCGATC+GGG 0.552144 1:-63206967 MsG0180003494.01.T01:CDS
ATTTCCACTAAGACCAATGT+GGG 0.553604 1:-63205488 MsG0180003494.01.T01:CDS
TTGATGACCAATCATGCTGC+TGG 0.555227 1:+63200827 None:intergenic
CCACATAATAGGATAAAGCT+TGG 0.555681 1:-63200487 MsG0180003494.01.T01:three_prime_UTR
TTAGTAGGTTCTGTAGGAGA+TGG 0.555725 1:+63199898 None:intergenic
TGTACTTTGCAACAAAAGGT+TGG 0.556484 1:+63205395 None:intergenic
TCATGTCAGCAAGCACATGA+TGG 0.557308 1:-63204875 MsG0180003494.01.T01:CDS
TTTAGAAAATCGAAGAGAAG+AGG 0.559856 1:+63201247 None:intergenic
CATGTCAGCAAGCACATGAT+GGG 0.560881 1:-63204874 MsG0180003494.01.T01:CDS
TGTCAACCCACCGACCGATA+CGG 0.563124 1:+63205307 None:intergenic
TTAGAAAATCGAAGAGAAGA+GGG 0.563192 1:+63201248 None:intergenic
ATGCTTGTGTGTATAAATGC+AGG 0.563739 1:+63207467 None:intergenic
GGCCAGTAACCAGGGGAAGG+TGG 0.570410 1:+63207332 None:intergenic
GAAAAGCCATGAACAAAGGT+AGG 0.576111 1:+63207414 None:intergenic
CAGGGTGTCTGTGTGAGTGA+TGG 0.578966 1:+63207486 None:intergenic
ATTTCAATGTTATAGCAGGA+CGG 0.582317 1:-63199933 MsG0180003494.01.T01:three_prime_UTR
ACGACACCACCGTGATGCAT+AGG 0.586001 1:+63205345 None:intergenic
TGGAACTTGGCCAGTAACCA+GGG 0.586133 1:+63207324 None:intergenic
TTTGCTGGCCAACAAGTGCG+TGG 0.591019 1:-63200093 MsG0180003494.01.T01:three_prime_UTR
ACCTCATACTTGATTATTAG+GGG 0.591229 1:-63200330 MsG0180003494.01.T01:three_prime_UTR
GGGTCCTCAGCACCAAAGCA+TGG 0.591378 1:-63207258 MsG0180003494.01.T01:CDS
TGGGCAGCTCCTCTACATCA+AGG 0.592828 1:-63199845 MsG0180003494.01.T01:three_prime_UTR
GCTTCGATTAAACTTCATCC+TGG 0.593516 1:-63206934 MsG0180003494.01.T01:CDS
TAGCACTATTGTAGAAGCGA+TGG 0.596336 1:-63200953 MsG0180003494.01.T01:three_prime_UTR
AACAATTCAAGAAATAAGCA+TGG 0.598015 1:-63200789 MsG0180003494.01.T01:three_prime_UTR
AAGCTTTATCCTATTATGTG+GGG 0.602065 1:+63200489 None:intergenic
CTTGGCCAGTAACCAGGGGA+AGG 0.603822 1:+63207329 None:intergenic
TGCCCATAAGGAGGTACCCA+AGG 0.604081 1:-63205525 MsG0180003494.01.T01:CDS
TACACAAACTTCAAAGCTAG+TGG 0.609014 1:-63205376 MsG0180003494.01.T01:CDS
AGTGTAGATATGATTTACAA+TGG 0.610506 1:-63200544 MsG0180003494.01.T01:three_prime_UTR
TTCAATGTTATAGCAGGACG+GGG 0.613425 1:-63199931 MsG0180003494.01.T01:three_prime_UTR
CAAAACTCAACAACAACCAA+AGG 0.615026 1:+63200112 None:intergenic
AGATGAAGCAGATTTAATCT+GGG 0.617700 1:-63199864 MsG0180003494.01.T01:three_prime_UTR
TTTGGTGCTGAGGACCCCAA+AGG 0.620328 1:+63207264 None:intergenic
GGAGTATAGAAAACCAGAGA+GGG 0.622440 1:-63201120 MsG0180003494.01.T01:CDS
ACGATTGGGACGAGAAAGAG+AGG 0.630172 1:+63201280 None:intergenic
CACCAAAGCATGGATCAACA+TGG 0.631601 1:-63207248 MsG0180003494.01.T01:CDS
CTGTCCAATCACTAGAGGAG+AGG 0.632924 1:-63200630 MsG0180003494.01.T01:three_prime_UTR
AAAGGAAAAGCCATGAACAA+AGG 0.636067 1:+63207410 None:intergenic
CTAGCAAAGAGAAATATGAA+AGG 0.636720 1:+63207392 None:intergenic
GGAACTTGGCCAGTAACCAG+GGG 0.650744 1:+63207325 None:intergenic
GCATGGCTCGACATAAACAA+TGG 0.653253 1:-63200772 MsG0180003494.01.T01:three_prime_UTR
AAATGCTAGAATTATTCCGA+AGG 0.655660 1:+63200300 None:intergenic
AATGGTTATAGAAACCTTTG+GGG 0.656393 1:-63207278 MsG0180003494.01.T01:CDS
ATAGAACCATAAACCCACAT+TGG 0.658123 1:+63205475 None:intergenic
CATTTCCACTAAGACCAATG+TGG 0.658778 1:-63205489 MsG0180003494.01.T01:CDS
GTTGCACAGCCTATGCATCA+CGG 0.660505 1:-63205354 MsG0180003494.01.T01:CDS
TGCTTGTGTGTATAAATGCA+GGG 0.673374 1:+63207468 None:intergenic
ACCCACCGACCGATACGGCG+AGG 0.682638 1:+63205312 None:intergenic
GTGATGGACTACTCAGTGAA+AGG 0.682789 1:+63207502 None:intergenic
TGGATGATATGCCCATAAGG+AGG 0.688479 1:-63205534 MsG0180003494.01.T01:CDS
GAGCACTGTCCAATCACTAG+AGG 0.693679 1:-63200635 MsG0180003494.01.T01:three_prime_UTR
TGCAGTGAATTATATCTGTG+TGG 0.716485 1:-63200042 MsG0180003494.01.T01:three_prime_UTR
GGGAGTATAGAAAACCAGAG+AGG 0.717755 1:-63201121 MsG0180003494.01.T01:CDS
AGTGAATTATATCTGTGTGG+TGG 0.738325 1:-63200039 MsG0180003494.01.T01:three_prime_UTR
GCACAGCCTATGCATCACGG+TGG 0.776007 1:-63205351 MsG0180003494.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAATTACTTTCATA+TGG + Chr1:63201717-63201736 None:intergenic 10.0%
!! AATAAAGAACTTAAATTAAA+TGG - Chr1:63203486-63203505 MsG0180003494.01.T01:intron 10.0%
!! TGATAAATAAATGAATAAAA+TGG + Chr1:63201121-63201140 None:intergenic 10.0%
!! TTTATTCATTTATTTATCAT+CGG - Chr1:63201122-63201141 MsG0180003494.01.T01:CDS 10.0%
!!! ATAAATGAATTTAAAATGTA+AGG + Chr1:63205611-63205630 None:intergenic 10.0%
!!! ATCGAAATTTAATTTTTTTT+TGG - Chr1:63206033-63206052 MsG0180003494.01.T01:intron 10.0%
!!! ATTTAATTTTTTTTTGGTAT+AGG - Chr1:63206039-63206058 MsG0180003494.01.T01:intron 10.0%
!!! TATTTTATTTTTTTTACCTA+TGG + Chr1:63203556-63203575 None:intergenic 10.0%
!!! TTTTAATATTTTTATACATG+TGG - Chr1:63203712-63203731 MsG0180003494.01.T01:intron 10.0%
!!! TTTTTTTTTAATTTTTCATG+GGG - Chr1:63202262-63202281 MsG0180003494.01.T01:intron 10.0%
!! AAAAATTCAATAATGTAACT+TGG - Chr1:63201241-63201260 MsG0180003494.01.T01:intron 15.0%
!! AAAATTCAATAATGTAACTT+GGG - Chr1:63201242-63201261 MsG0180003494.01.T01:intron 15.0%
!! AAATCAACAAGATAAAAAAT+TGG + Chr1:63207008-63207027 None:intergenic 15.0%
!! AATCAACAAGATAAAAAATT+GGG + Chr1:63207007-63207026 None:intergenic 15.0%
!! AATTGTTAAGAAATATTTAG+AGG - Chr1:63206775-63206794 MsG0180003494.01.T01:intron 15.0%
!! ATAATTAGAAAGAAAAATGT+AGG + Chr1:63200357-63200376 None:intergenic 15.0%
!! ATTGTAAAGTGAATAAATTT+GGG - Chr1:63202191-63202210 MsG0180003494.01.T01:intron 15.0%
!! GAATACAATATTAAAAACTA+GGG - Chr1:63202774-63202793 MsG0180003494.01.T01:intron 15.0%
!! TAAAATAATGATATGATTAG+TGG + Chr1:63206155-63206174 None:intergenic 15.0%
!! TATTGTAAAGTGAATAAATT+TGG - Chr1:63202190-63202209 MsG0180003494.01.T01:intron 15.0%
!! TGAATACAATATTAAAAACT+AGG - Chr1:63202773-63202792 MsG0180003494.01.T01:intron 15.0%
!!! ATTTGTTCAAGTAATTTTTT+TGG + Chr1:63204545-63204564 None:intergenic 15.0%
!!! ATTTTTTTTTGAAGGAATAA+TGG - Chr1:63201559-63201578 MsG0180003494.01.T01:intron 15.0%
!!! CATTTTTCTTTCTAATTATT+AGG - Chr1:63200358-63200377 MsG0180003494.01.T01:three_prime_UTR 15.0%
!!! CTTACTAAATTTTAATCTAA+TGG - Chr1:63201529-63201548 MsG0180003494.01.T01:intron 15.0%
!!! GTGAAACTAATTTTATAATA+AGG + Chr1:63201673-63201692 None:intergenic 15.0%
!!! TAATTTTATAATAAGGTATG+CGG + Chr1:63201666-63201685 None:intergenic 15.0%
!!! TGATATATTTTTTTTCAAAG+AGG + Chr1:63201381-63201400 None:intergenic 15.0%
!!! TTATTAATAGTATGTTTTGA+AGG + Chr1:63206289-63206308 None:intergenic 15.0%
!!! TTATTTTCTTGAATTGTTAT+TGG + Chr1:63206618-63206637 None:intergenic 15.0%
!! AAGTTTAGATTTACTTCAAT+TGG - Chr1:63204598-63204617 MsG0180003494.01.T01:intron 20.0%
!! AATGAAATTTCTTAACACTA+AGG + Chr1:63204707-63204726 None:intergenic 20.0%
!! ACACATGATAAATATAACAA+GGG + Chr1:63205682-63205701 None:intergenic 20.0%
!! ACGCAAAAGTAAAATTAAAT+AGG - Chr1:63203448-63203467 MsG0180003494.01.T01:intron 20.0%
!! AGACAAATGTTTATATAAGA+GGG - Chr1:63200682-63200701 MsG0180003494.01.T01:three_prime_UTR 20.0%
!! ATCAACAAGATAAAAAATTG+GGG + Chr1:63207006-63207025 None:intergenic 20.0%
!! ATGAAATTTCTTAACACTAA+GGG + Chr1:63204706-63204725 None:intergenic 20.0%
!! ATTTCGATTTCGATTTAATT+AGG - Chr1:63206435-63206454 MsG0180003494.01.T01:intron 20.0%
!! CTATAATTGGTGAAATAATA+AGG - Chr1:63206952-63206971 MsG0180003494.01.T01:CDS 20.0%
!! GAAAATTGAAAAGAAAATCA+TGG + Chr1:63205993-63206012 None:intergenic 20.0%
!! GAGGATAAATATATTATATC+AGG + Chr1:63205547-63205566 None:intergenic 20.0%
!! TAAAGATGTATTCTGTATAA+AGG - Chr1:63207198-63207217 MsG0180003494.01.T01:intron 20.0%
!! TAACCTGTTATTCATAATAT+TGG + Chr1:63205469-63205488 None:intergenic 20.0%
!! TACACATGATAAATATAACA+AGG + Chr1:63205683-63205702 None:intergenic 20.0%
!! TATATTTATCATGTGTATGA+GGG - Chr1:63205686-63205705 MsG0180003494.01.T01:intron 20.0%
!! TGAAATGTTTAACAATTATG+TGG - Chr1:63206347-63206366 MsG0180003494.01.T01:intron 20.0%
!! TGATAATAATAAACATCATG+TGG + Chr1:63205283-63205302 None:intergenic 20.0%
!! TTATATTTATCATGTGTATG+AGG - Chr1:63205685-63205704 MsG0180003494.01.T01:intron 20.0%
!! TTGTAAAGTGAATAAATTTG+GGG - Chr1:63202192-63202211 MsG0180003494.01.T01:intron 20.0%
!!! AAATGAAGTTGATTAATAGA+AGG - Chr1:63200510-63200529 MsG0180003494.01.T01:three_prime_UTR 20.0%
!!! AATGGATTTAAGAAGAAAAT+TGG + Chr1:63204574-63204593 None:intergenic 20.0%
!!! CATTTGTTGGAATTAATTAA+TGG - Chr1:63202861-63202880 MsG0180003494.01.T01:intron 20.0%
!!! CTTATTTCTTGAATTGTTAT+CGG + Chr1:63206570-63206589 None:intergenic 20.0%
!!! GTCATGATATTTTTTTTTGA+AGG - Chr1:63201551-63201570 MsG0180003494.01.T01:intron 20.0%
!!! TAGTTATTTCCAAATTACAA+TGG - Chr1:63200261-63200280 MsG0180003494.01.T01:three_prime_UTR 20.0%
!!! TGTTGTTGTTCTATTATAAT+TGG - Chr1:63206898-63206917 MsG0180003494.01.T01:intron 20.0%
!!! TTTTTTCAAAGAGGTATTAT+GGG + Chr1:63201372-63201391 None:intergenic 20.0%
!!! TTTTTTTCAAAGAGGTATTA+TGG + Chr1:63201373-63201392 None:intergenic 20.0%
! AACAATTCAAGAAATAAGCA+TGG - Chr1:63206572-63206591 MsG0180003494.01.T01:intron 25.0%
! AACCTCATACTTGATTATTA+GGG - Chr1:63207030-63207049 MsG0180003494.01.T01:intron 25.0%
! AACTTCACAATAAATTTGAG+CGG + Chr1:63202597-63202616 None:intergenic 25.0%
! AAGTAGACATTGAATTTCTA+GGG - Chr1:63200631-63200650 MsG0180003494.01.T01:three_prime_UTR 25.0%
! AATAATGGTCATGATATTGA+AGG - Chr1:63201574-63201593 MsG0180003494.01.T01:intron 25.0%
! AATCTTCTCTATTCATTTGT+TGG - Chr1:63202848-63202867 MsG0180003494.01.T01:intron 25.0%
! AATTGAAGATTTGTAAGAGT+GGG + Chr1:63205322-63205341 None:intergenic 25.0%
! AATTGTGCTTGTGTAAAAAA+TGG - Chr1:63205645-63205664 MsG0180003494.01.T01:intron 25.0%
! ACAAATTTCAATGTTATAGC+AGG - Chr1:63207424-63207443 MsG0180003494.01.T01:five_prime_UTR 25.0%
! ACATTACAACTTGTACTAAT+AGG - Chr1:63204813-63204832 MsG0180003494.01.T01:intron 25.0%
! AGTCAAGAAGTTAAATATGA+AGG + Chr1:63204644-63204663 None:intergenic 25.0%
! AGTGTAGATATGATTTACAA+TGG - Chr1:63206817-63206836 MsG0180003494.01.T01:intron 25.0%
! ATAATGGTCATGATATTGAA+GGG - Chr1:63201575-63201594 MsG0180003494.01.T01:intron 25.0%
! ATACAGAATACATCTTTAAG+AGG + Chr1:63207196-63207215 None:intergenic 25.0%
! ATATTTAGAGGTCAATTGTT+TGG - Chr1:63206787-63206806 MsG0180003494.01.T01:intron 25.0%
! ATCGATTATTCATCACAAAA+TGG - Chr1:63205939-63205958 MsG0180003494.01.T01:intron 25.0%
! ATTCAAGACCTAATCTTATT+AGG - Chr1:63205339-63205358 MsG0180003494.01.T01:CDS 25.0%
! CAGACAAATGTTTATATAAG+AGG - Chr1:63200681-63200700 MsG0180003494.01.T01:three_prime_UTR 25.0%
! CATAATACTAGCAAATGATT+TGG + Chr1:63202230-63202249 None:intergenic 25.0%
! CTTTATTCTTCTTACATCAT+TGG + Chr1:63203270-63203289 None:intergenic 25.0%
! GAGACATTTCACTTAATAAA+TGG - Chr1:63200880-63200899 MsG0180003494.01.T01:three_prime_UTR 25.0%
! GATTTCGATTTAATTAGGTT+GGG - Chr1:63206440-63206459 MsG0180003494.01.T01:intron 25.0%
! GGAACCTTACTAATTATAAA+TGG - Chr1:63201597-63201616 MsG0180003494.01.T01:intron 25.0%
! GTAAATCTAAACTTGAGAAA+TGG + Chr1:63204592-63204611 None:intergenic 25.0%
! TAAACTATCCTTATAACTTG+TGG + Chr1:63201089-63201108 None:intergenic 25.0%
! TATCTAAGTAATGAGTTTGT+CGG - Chr1:63202913-63202932 MsG0180003494.01.T01:intron 25.0%
! TCAAAAAAGTAGAGCATATA+GGG - Chr1:63201168-63201187 MsG0180003494.01.T01:intron 25.0%
! TCTATCTACTGGAAAAATTA+CGG - Chr1:63200206-63200225 MsG0180003494.01.T01:three_prime_UTR 25.0%
! TCTCCAATATTATGAATAAC+AGG - Chr1:63205463-63205482 MsG0180003494.01.T01:CDS 25.0%
! TCTTTCTAATTATTAGGAAG+TGG - Chr1:63200364-63200383 MsG0180003494.01.T01:three_prime_UTR 25.0%
! TGAAATAACCACAAGTTATA+AGG - Chr1:63201078-63201097 MsG0180003494.01.T01:CDS 25.0%
! TGACGATTATTATACTATGT+CGG + Chr1:63200989-63201008 None:intergenic 25.0%
! TTAAAGTTTCAGCAAAATCA+TGG + Chr1:63200237-63200256 None:intergenic 25.0%
! TTAAATGTGACACTCTTTAA+AGG + Chr1:63201026-63201045 None:intergenic 25.0%
! TTAATGATGAGACTGTAATA+TGG + Chr1:63205411-63205430 None:intergenic 25.0%
! TTAGATTTATGCTTTGCAAT+GGG + Chr1:63204495-63204514 None:intergenic 25.0%
! TTCAAAAAAGTAGAGCATAT+AGG - Chr1:63201167-63201186 MsG0180003494.01.T01:intron 25.0%
!! ACATTGACACAACAAATTTT+TGG - Chr1:63202302-63202321 MsG0180003494.01.T01:intron 25.0%
!! ATTATAGTATTGGATAGAGT+AGG - Chr1:63206383-63206402 MsG0180003494.01.T01:intron 25.0%
!! GGGATTAATAAGCATATTTT+GGG + Chr1:63204475-63204494 None:intergenic 25.0%
!! TAATTTTGAATCAAAACGCA+GGG + Chr1:63205876-63205895 None:intergenic 25.0%
!! TGGGATTAATAAGCATATTT+TGG + Chr1:63204476-63204495 None:intergenic 25.0%
!! TTATAGTATTGGATAGAGTA+GGG - Chr1:63206384-63206403 MsG0180003494.01.T01:intron 25.0%
!! TTTTCTGCTGAAACATAATA+GGG - Chr1:63201205-63201224 MsG0180003494.01.T01:intron 25.0%
!! TTTTTATACATGTGGCAATT+TGG - Chr1:63203720-63203739 MsG0180003494.01.T01:intron 25.0%
!! TTTTTCTGCTGAAACATAAT+AGG - Chr1:63201204-63201223 MsG0180003494.01.T01:intron 25.0%
!!! AATGCTCCATAAGTTTTATT+CGG - Chr1:63206922-63206941 MsG0180003494.01.T01:CDS 25.0%
!!! ACAATTTCCTACAACTTTTT+TGG + Chr1:63206761-63206780 None:intergenic 25.0%
!!! AGAGGCATTTGAATAAATAT+AGG - Chr1:63203144-63203163 MsG0180003494.01.T01:intron 25.0%
!!! AGTGCCATTTATAATTAGTA+AGG + Chr1:63201604-63201623 None:intergenic 25.0%
!!! ATAAGCTTGTTTTATAGCTT+TGG - Chr1:63204368-63204387 MsG0180003494.01.T01:intron 25.0%
!!! ATAGATTTTTTCTTGTTTGC+TGG + Chr1:63202726-63202745 None:intergenic 25.0%
!!! ATAGTGATGAATTTTTTGGT+AGG + Chr1:63200761-63200780 None:intergenic 25.0%
!!! ATTGATTTGTCTGATTCTTA+CGG - Chr1:63201281-63201300 MsG0180003494.01.T01:CDS 25.0%
!!! ATTTTGAGTAGCATTAATTC+GGG + Chr1:63202556-63202575 None:intergenic 25.0%
!!! CACAAGCACAATTTAATTTT+AGG + Chr1:63205638-63205657 None:intergenic 25.0%
!!! CATTTTGAGTAGCATTAATT+CGG + Chr1:63202557-63202576 None:intergenic 25.0%
!!! CTAAACTATTTTTTGACATG+AGG + Chr1:63205066-63205085 None:intergenic 25.0%
!!! GTAATTTTTTTGGTTCACTT+AGG + Chr1:63204535-63204554 None:intergenic 25.0%
!!! TAGCATAGTGATGAATTTTT+TGG + Chr1:63200765-63200784 None:intergenic 25.0%
!!! TTGTATTATTTGCTTTTGCT+TGG + Chr1:63204730-63204749 None:intergenic 25.0%
!!! TTTTTATGTCGTTTTGAGTT+TGG + Chr1:63205853-63205872 None:intergenic 25.0%
AAACAACACTGAAACACTAT+AGG + Chr1:63204050-63204069 None:intergenic 30.0%
AAAGCAAAGTGTATTGGAAT+TGG - Chr1:63202363-63202382 MsG0180003494.01.T01:intron 30.0%
AAATCTAACAGCTATTGCAA+AGG - Chr1:63204507-63204526 MsG0180003494.01.T01:intron 30.0%
AAATGCTAGAATTATTCCGA+AGG + Chr1:63207064-63207083 None:intergenic 30.0%
AACAATGTACAGATTCTTAG+TGG - Chr1:63201807-63201826 MsG0180003494.01.T01:intron 30.0%
AACTATTGCAAGATCCTAAA+AGG - Chr1:63202127-63202146 MsG0180003494.01.T01:intron 30.0%
AAGTCATCTTCTTGATTATG+TGG - Chr1:63203662-63203681 MsG0180003494.01.T01:intron 30.0%
AATCTAACAGCTATTGCAAA+GGG - Chr1:63204508-63204527 MsG0180003494.01.T01:intron 30.0%
AATGGTTATAGAAACCTTTG+GGG - Chr1:63200083-63200102 MsG0180003494.01.T01:three_prime_UTR 30.0%
AATGTTTATATAAGAGGGAG+TGG - Chr1:63200687-63200706 MsG0180003494.01.T01:three_prime_UTR 30.0%
AATTCTCAGTGAATCTTAGA+AGG - Chr1:63203182-63203201 MsG0180003494.01.T01:intron 30.0%
ACAAAAAGAAGAAACCTCAA+CGG - Chr1:63205499-63205518 MsG0180003494.01.T01:CDS 30.0%
ACAATGGTTATAGAAACCTT+TGG - Chr1:63200081-63200100 MsG0180003494.01.T01:three_prime_UTR 30.0%
ACATTTGTCTGCAAAGTATA+AGG + Chr1:63200672-63200691 None:intergenic 30.0%
ACCTCATACTTGATTATTAG+GGG - Chr1:63207031-63207050 MsG0180003494.01.T01:intron 30.0%
ACTAGATGCAAATTTGAGTA+AGG + Chr1:63204924-63204943 None:intergenic 30.0%
ACTATTGCAAGATCCTAAAA+GGG - Chr1:63202128-63202147 MsG0180003494.01.T01:intron 30.0%
ACTTCAATTGGTGTAGTTAT+AGG - Chr1:63204610-63204629 MsG0180003494.01.T01:intron 30.0%
AGATGAAGCAGATTTAATCT+GGG - Chr1:63207497-63207516 MsG0180003494.01.T01:five_prime_UTR 30.0%
ATATGGCTGCAATTGTATAA+TGG + Chr1:63201700-63201719 None:intergenic 30.0%
ATCAACATGGAACAACAATT+TGG - Chr1:63200126-63200145 MsG0180003494.01.T01:three_prime_UTR 30.0%
ATCTAAGTAATGAGTTTGTC+GGG - Chr1:63202914-63202933 MsG0180003494.01.T01:intron 30.0%
ATGTCTCTTATAGTTGAGAT+CGG + Chr1:63200867-63200886 None:intergenic 30.0%
ATTCTTAGGTAGGTTATTAG+AGG - Chr1:63204086-63204105 MsG0180003494.01.T01:intron 30.0%
ATTGAAGATTTGTAAGAGTG+GGG + Chr1:63205321-63205340 None:intergenic 30.0%
ATTTCAATGTTATAGCAGGA+CGG - Chr1:63207428-63207447 MsG0180003494.01.T01:five_prime_UTR 30.0%
CAACCTCATACTTGATTATT+AGG - Chr1:63207029-63207048 MsG0180003494.01.T01:intron 30.0%
CAATGGTTATAGAAACCTTT+GGG - Chr1:63200082-63200101 MsG0180003494.01.T01:three_prime_UTR 30.0%
CGATTTCGATTTAATTAGGT+TGG - Chr1:63206439-63206458 MsG0180003494.01.T01:intron 30.0%
CGTCAATAGCATTATAGTAT+TGG - Chr1:63206373-63206392 MsG0180003494.01.T01:intron 30.0%
CTAAGATTCACTGAGAATTT+AGG + Chr1:63203181-63203200 None:intergenic 30.0%
CTAGCAAAGAGAAATATGAA+AGG + Chr1:63199972-63199991 None:intergenic 30.0%
CTATTAGGTACTTCATGATT+GGG - Chr1:63203344-63203363 MsG0180003494.01.T01:intron 30.0%
CTGTAATATGGATTTAGATG+AGG + Chr1:63205399-63205418 None:intergenic 30.0%
CTTCAATTGGTGTAGTTATA+GGG - Chr1:63204611-63204630 MsG0180003494.01.T01:intron 30.0%
CTTTACCTATTAAGGTTTGA+GGG + Chr1:63204993-63205012 None:intergenic 30.0%
GAAGGTGACAAACATAATAT+TGG + Chr1:63203380-63203399 None:intergenic 30.0%
GAAGTAGACATTGAATTTCT+AGG - Chr1:63200630-63200649 MsG0180003494.01.T01:three_prime_UTR 30.0%
GAATAAATTTGGGGATGATT+TGG - Chr1:63202201-63202220 MsG0180003494.01.T01:intron 30.0%
GAATTGAAGATTTGTAAGAG+TGG + Chr1:63205323-63205342 None:intergenic 30.0%
GAGAAATGAAATTTCATCTG+TGG - Chr1:63200729-63200748 MsG0180003494.01.T01:three_prime_UTR 30.0%
GGAAAAATTTGCATTAGAAG+CGG - Chr1:63206973-63206992 MsG0180003494.01.T01:CDS 30.0%
GTGACTTACATTAATTCCTT+AGG + Chr1:63200799-63200818 None:intergenic 30.0%
GTTAGATTTATGCTTTGCAA+TGG + Chr1:63204496-63204515 None:intergenic 30.0%
GTTTATGTAATGTTTCTCTG+TGG - Chr1:63202324-63202343 MsG0180003494.01.T01:intron 30.0%
TAATATGGATTTAGATGAGG+TGG + Chr1:63205396-63205415 None:intergenic 30.0%
TAATGGTCATGATATTGAAG+GGG - Chr1:63201576-63201595 MsG0180003494.01.T01:intron 30.0%
TACGAAGGAATCATCATTAA+TGG + Chr1:63205026-63205045 None:intergenic 30.0%
TAGATGAAGCAGATTTAATC+TGG - Chr1:63207496-63207515 MsG0180003494.01.T01:five_prime_UTR 30.0%
TATTTCCAAATTACAATGGC+CGG - Chr1:63200265-63200284 MsG0180003494.01.T01:three_prime_UTR 30.0%
TCAAATCAACATCAAGCATT+TGG + Chr1:63207088-63207107 None:intergenic 30.0%
TCCTTAGAGAGACAAAAATT+AGG - Chr1:63204024-63204043 MsG0180003494.01.T01:intron 30.0%
TCTATTAGGTACTTCATGAT+TGG - Chr1:63203343-63203362 MsG0180003494.01.T01:intron 30.0%
TCTCAATAAAACCTACATCT+CGG - Chr1:63205193-63205212 MsG0180003494.01.T01:intron 30.0%
TCTTTACCTATTAAGGTTTG+AGG + Chr1:63204994-63205013 None:intergenic 30.0%
TGAACATGACAATAGTAACA+TGG + Chr1:63202448-63202467 None:intergenic 30.0%
TGCAATAGTTATAAACCATG+TGG + Chr1:63202117-63202136 None:intergenic 30.0%
TTACTCAAATTTGCATCTAG+TGG - Chr1:63204923-63204942 MsG0180003494.01.T01:intron 30.0%
TTAGAAAATCGAAGAGAAGA+GGG + Chr1:63206116-63206135 None:intergenic 30.0%
TTCAGCAGAAAAAGAAATGT+TGG + Chr1:63201197-63201216 None:intergenic 30.0%
TTCATCACTATGCTATAGTT+TGG - Chr1:63200770-63200789 MsG0180003494.01.T01:three_prime_UTR 30.0%
TTTAGAAAATCGAAGAGAAG+AGG + Chr1:63206117-63206136 None:intergenic 30.0%
TTTATAATAAGGTATGCGGT+TGG + Chr1:63201662-63201681 None:intergenic 30.0%
TTTCTCAAAGAAACAACTTG+TGG + Chr1:63204244-63204263 None:intergenic 30.0%
TTTGTGTACTTTGCAACAAA+AGG + Chr1:63201973-63201992 None:intergenic 30.0%
! AAGCTTTATCCTATTATGTG+GGG + Chr1:63206875-63206894 None:intergenic 30.0%
! AATCATGAAGTACCTAATAG+AGG + Chr1:63203344-63203363 None:intergenic 30.0%
! ACGAATGATTGACATTTTGT+AGG - Chr1:63201330-63201349 MsG0180003494.01.T01:intron 30.0%
! ATTGCAACTACGATTCTTTT+TGG + Chr1:63202754-63202773 None:intergenic 30.0%
! CAAGCTTTATCCTATTATGT+GGG + Chr1:63206876-63206895 None:intergenic 30.0%
! CCTAATTTTGTGTGTTTTCA+GGG - Chr1:63206194-63206213 MsG0180003494.01.T01:intron 30.0%
! CTAATTTTGTGTGTTTTCAG+GGG - Chr1:63206195-63206214 MsG0180003494.01.T01:intron 30.0%
! GTAATTTTGAATCAAAACGC+AGG + Chr1:63205877-63205896 None:intergenic 30.0%
! GTTGACTTCTTTACCTATTA+AGG + Chr1:63205001-63205020 None:intergenic 30.0%
! GTTTGAGACATTAAGGTAAA+TGG - Chr1:63202385-63202404 MsG0180003494.01.T01:intron 30.0%
! TCCTAATTTTGTGTGTTTTC+AGG - Chr1:63206193-63206212 MsG0180003494.01.T01:intron 30.0%
! TCTTCTCTTCGATTTTCTAA+AGG - Chr1:63206116-63206135 MsG0180003494.01.T01:intron 30.0%
! TGACATTTTGTAGGATGAAA+TGG - Chr1:63201339-63201358 MsG0180003494.01.T01:intron 30.0%
! TTCTTTGAGAAACAAGAGAT+TGG - Chr1:63204252-63204271 MsG0180003494.01.T01:intron 30.0%
!! AATACACTTTGCTTTTCATC+GGG + Chr1:63202358-63202377 None:intergenic 30.0%
!! CAATACACTTTGCTTTTCAT+CGG + Chr1:63202359-63202378 None:intergenic 30.0%
!! TTTTGAGTAGCATTAATTCG+GGG + Chr1:63202555-63202574 None:intergenic 30.0%
!! TTTTGATTGCAGAATGTTAG+TGG - Chr1:63202808-63202827 MsG0180003494.01.T01:intron 30.0%
!!! GATGCTGTATAGTTTTAGTA+AGG - Chr1:63206698-63206717 MsG0180003494.01.T01:CDS 30.0%
!!! GTATGTTTTGAAGGCTTAAT+AGG + Chr1:63206280-63206299 None:intergenic 30.0%
!!! GTGATCTACGTGTTTTTTTA+TGG - Chr1:63201636-63201655 MsG0180003494.01.T01:intron 30.0%
!!! TTTTCGCATTGTTTTAACAC+CGG - Chr1:63204316-63204335 MsG0180003494.01.T01:intron 30.0%
!!! TTTTTTTGGTATAGGTTGCT+TGG - Chr1:63206047-63206066 MsG0180003494.01.T01:intron 30.0%
AAAGGAAAAGCCATGAACAA+AGG + Chr1:63199954-63199973 None:intergenic 35.0%
AACAACCAAAGGATCATATC+TGG + Chr1:63207241-63207260 None:intergenic 35.0%
AACAACCAGATATGATCCTT+TGG - Chr1:63207233-63207252 MsG0180003494.01.T01:CDS 35.0%
AACAATTTCACCCCTAACAT+CGG - Chr1:63205231-63205250 MsG0180003494.01.T01:intron 35.0%
AAGATTTAACCCCAACATTC+AGG + Chr1:63202168-63202187 None:intergenic 35.0%
AAGTTACCTACCTTTGTTCA+TGG - Chr1:63199941-63199960 MsG0180003494.01.T01:three_prime_UTR 35.0%
AAGTTGCACATTGATCACAT+GGG - Chr1:63202958-63202977 MsG0180003494.01.T01:intron 35.0%
ACCCCTAATAATCAAGTATG+AGG + Chr1:63207035-63207054 None:intergenic 35.0%
ACTAACCCTCAAACCTTAAT+AGG - Chr1:63204985-63205004 MsG0180003494.01.T01:intron 35.0%
ACTAATCAGATTCATACCTG+AGG + Chr1:63200162-63200181 None:intergenic 35.0%
ACTTGACATCATTCAAGAGA+TGG + Chr1:63205366-63205385 None:intergenic 35.0%
AGAAGTCGTTAATATCACAG+CGG + Chr1:63203527-63203546 None:intergenic 35.0%
AGACACACTATGGTTCAATT+GGG + Chr1:63204951-63204970 None:intergenic 35.0%
AGCTAGAGAATAGAATCTAC+AGG + Chr1:63206481-63206500 None:intergenic 35.0%
AGGAAGACCAAAAAAGTTGT+AGG - Chr1:63206751-63206770 MsG0180003494.01.T01:CDS 35.0%
AGTGAATTATATCTGTGTGG+TGG - Chr1:63207322-63207341 MsG0180003494.01.T01:CDS 35.0%
AGTGTAGATACTCTATCTAC+TGG - Chr1:63200195-63200214 MsG0180003494.01.T01:three_prime_UTR 35.0%
AGTGTATCTCCCTATAGAAT+TGG + Chr1:63203087-63203106 None:intergenic 35.0%
AGTTATTCCCTTCAGACATT+GGG + Chr1:63205260-63205279 None:intergenic 35.0%
ATAGAACCATAAACCCACAT+TGG + Chr1:63201889-63201908 None:intergenic 35.0%
ATAGACTAACACCTGAATGT+TGG - Chr1:63202154-63202173 MsG0180003494.01.T01:intron 35.0%
ATCTACATTCCAGGTTTAGT+AGG + Chr1:63207481-63207500 None:intergenic 35.0%
ATCTACTGGAAAAATTACGG+TGG - Chr1:63200209-63200228 MsG0180003494.01.T01:three_prime_UTR 35.0%
ATGCTTGTGTGTATAAATGC+AGG + Chr1:63199897-63199916 None:intergenic 35.0%
ATGTACAGTCATATGACAAC+AGG + Chr1:63203623-63203642 None:intergenic 35.0%
ATGTTAGGGGTGAAATTGTT+CGG + Chr1:63205231-63205250 None:intergenic 35.0%
ATTTCCACTAAGACCAATGT+GGG - Chr1:63201873-63201892 MsG0180003494.01.T01:intron 35.0%
CAAAACTCAACAACAACCAA+AGG + Chr1:63207252-63207271 None:intergenic 35.0%
CATACTTGATTATTAGGGGT+TGG - Chr1:63207035-63207054 MsG0180003494.01.T01:intron 35.0%
CATTAACTCAACAAACCTAG+TGG - Chr1:63205152-63205171 MsG0180003494.01.T01:intron 35.0%
CATTGTGTTTCCTAATTACG+TGG - Chr1:63203317-63203336 MsG0180003494.01.T01:intron 35.0%
CCACATAATAGGATAAAGCT+TGG - Chr1:63206874-63206893 MsG0180003494.01.T01:intron 35.0%
CCATGTAACACAAGATTCTT+AGG - Chr1:63204072-63204091 MsG0180003494.01.T01:intron 35.0%
CCCTGAAAACACACAAAATT+AGG + Chr1:63206197-63206216 None:intergenic 35.0%
CCTAAGAATCTTGTGTTACA+TGG + Chr1:63204075-63204094 None:intergenic 35.0%
CGATGAAAAGCAAAGTGTAT+TGG - Chr1:63202357-63202376 MsG0180003494.01.T01:intron 35.0%
CTTCACTTGCATACTTTCTT+TGG - Chr1:63204662-63204681 MsG0180003494.01.T01:intron 35.0%
CTTGACATCATTCAAGAGAT+GGG + Chr1:63205365-63205384 None:intergenic 35.0%
GACTGTACATTAAGCTTATG+TGG - Chr1:63203633-63203652 MsG0180003494.01.T01:intron 35.0%
GATATTCGTTTGACTGTCAA+GGG - Chr1:63207106-63207125 MsG0180003494.01.T01:intron 35.0%
GATGATTCCTTCGTATGAAA+CGG - Chr1:63205031-63205050 MsG0180003494.01.T01:intron 35.0%
GCTGCAATTGTATAATGGTA+TGG + Chr1:63201695-63201714 None:intergenic 35.0%
GTAACACAAGATTCTTAGGT+AGG - Chr1:63204076-63204095 MsG0180003494.01.T01:intron 35.0%
GTATGTTCTTACTTTCTCAG+AGG - Chr1:63203126-63203145 MsG0180003494.01.T01:intron 35.0%
GTCTGATTCTTACGGAATAT+AGG - Chr1:63201289-63201308 MsG0180003494.01.T01:CDS 35.0%
TAATAGAGGACCACGTAATT+AGG + Chr1:63203330-63203349 None:intergenic 35.0%
TAATTACGTGGTCCTCTATT+AGG - Chr1:63203329-63203348 MsG0180003494.01.T01:intron 35.0%
TACACAAACTTCAAAGCTAG+TGG - Chr1:63201985-63202004 MsG0180003494.01.T01:intron 35.0%
TAGACACACTATGGTTCAAT+TGG + Chr1:63204952-63204971 None:intergenic 35.0%
TAGACTAACACCTGAATGTT+GGG - Chr1:63202155-63202174 MsG0180003494.01.T01:intron 35.0%
TCAGGCACTAAAGTGTAATA+AGG + Chr1:63205529-63205548 None:intergenic 35.0%
TCTACACGGTTTAGTGTTTA+GGG - Chr1:63203058-63203077 MsG0180003494.01.T01:intron 35.0%
TCTACTTCATCATGAAATCC+TGG + Chr1:63200618-63200637 None:intergenic 35.0%
TGATATTCGTTTGACTGTCA+AGG - Chr1:63207105-63207124 MsG0180003494.01.T01:intron 35.0%
TGCAGTGAATTATATCTGTG+TGG - Chr1:63207319-63207338 MsG0180003494.01.T01:CDS 35.0%
TGCTTGTGTGTATAAATGCA+GGG + Chr1:63199896-63199915 None:intergenic 35.0%
TGTACAGTCATATGACAACA+GGG + Chr1:63203622-63203641 None:intergenic 35.0%
TGTACTTTGCAACAAAAGGT+TGG + Chr1:63201969-63201988 None:intergenic 35.0%
TTCACGAAATCAAATTGTGC+CGG + Chr1:63200287-63200306 None:intergenic 35.0%
TTCTACACGGTTTAGTGTTT+AGG - Chr1:63203057-63203076 MsG0180003494.01.T01:intron 35.0%
TTGGTTAAACAGACATCCTT+AGG - Chr1:63205758-63205777 MsG0180003494.01.T01:intron 35.0%
TTTCAATGTTATAGCAGGAC+GGG - Chr1:63207429-63207448 MsG0180003494.01.T01:five_prime_UTR 35.0%
TTTGTGCATGTTTGAATTCG+CGG + Chr1:63200315-63200334 None:intergenic 35.0%
! AACAACATTGGTCTATGAGT+TGG - Chr1:63202081-63202100 MsG0180003494.01.T01:intron 35.0%
! AACATTCAGGTGTTAGTCTA+TGG + Chr1:63202155-63202174 None:intergenic 35.0%
! AGGTCTATGAGCTTTTACAA+TGG - Chr1:63200065-63200084 MsG0180003494.01.T01:three_prime_UTR 35.0%
! CCAAGCTTTATCCTATTATG+TGG + Chr1:63206877-63206896 None:intergenic 35.0%
! CCTTCACTCACATTTTTGTT+GGG + Chr1:63202679-63202698 None:intergenic 35.0%
! GAATTTCTAGGGACAACATT+TGG - Chr1:63200642-63200661 MsG0180003494.01.T01:three_prime_UTR 35.0%
! GCCTAATTTTTGTCTCTCTA+AGG + Chr1:63204028-63204047 None:intergenic 35.0%
! GTGGGTTTATGGTTCTATTT+GGG - Chr1:63201891-63201910 MsG0180003494.01.T01:intron 35.0%
! TATTTGGGATGCTTCATCAT+GGG - Chr1:63201906-63201925 MsG0180003494.01.T01:intron 35.0%
! TCCTTCACTCACATTTTTGT+TGG + Chr1:63202680-63202699 None:intergenic 35.0%
! TGCTATAGTTTGGAATCCTA+AGG - Chr1:63200780-63200799 MsG0180003494.01.T01:three_prime_UTR 35.0%
! TGTGGGTTTATGGTTCTATT+TGG - Chr1:63201890-63201909 MsG0180003494.01.T01:intron 35.0%
!! AAGTGCGTGGATTATGTTTT+GGG - Chr1:63207281-63207300 MsG0180003494.01.T01:CDS 35.0%
!! AGGGTATTACTCAGATGTTT+TGG - Chr1:63202992-63203011 MsG0180003494.01.T01:intron 35.0%
!! GAGTGGTGATGGAAAATTAT+AGG - Chr1:63200704-63200723 MsG0180003494.01.T01:three_prime_UTR 35.0%
!! GGAATTGGTTTGAGACATTA+AGG - Chr1:63202378-63202397 MsG0180003494.01.T01:intron 35.0%
!! TATAGGTTGCTTGGTTTGTT+TGG - Chr1:63206056-63206075 MsG0180003494.01.T01:intron 35.0%
!! TTTTCAGGGGAAAATCTATG+CGG - Chr1:63206208-63206227 MsG0180003494.01.T01:intron 35.0%
AAAGCTCATAGACCTGACTT+TGG + Chr1:63200060-63200079 None:intergenic 40.0%
AACATAATCCACGCACTTGT+TGG + Chr1:63207279-63207298 None:intergenic 40.0%
AATGTTGCATCACTCTTCCT+TGG + Chr1:63201856-63201875 None:intergenic 40.0%
AGACATTGCAGTTTGTGACT+CGG - Chr1:63203963-63203982 MsG0180003494.01.T01:intron 40.0%
AGACTAACACCTGAATGTTG+GGG - Chr1:63202156-63202175 MsG0180003494.01.T01:intron 40.0%
AGAGGGAGAAAGTTAACGAT+TGG + Chr1:63206099-63206118 None:intergenic 40.0%
AGTGAAGGACGCAAAGATAT+AGG - Chr1:63202691-63202710 MsG0180003494.01.T01:intron 40.0%
ATCTGCTTCATCTACATTCC+AGG + Chr1:63207490-63207509 None:intergenic 40.0%
ATGTTGCATCACTCTTCCTT+GGG + Chr1:63201855-63201874 None:intergenic 40.0%
ATTCGACAGTAGACACACTA+TGG + Chr1:63204961-63204980 None:intergenic 40.0%
CAAGTTGCACATTGATCACA+TGG - Chr1:63202957-63202976 MsG0180003494.01.T01:intron 40.0%
CACATGGGTTTGTACATGTA+GGG - Chr1:63202973-63202992 MsG0180003494.01.T01:intron 40.0%
CATTTCCACTAAGACCAATG+TGG - Chr1:63201872-63201891 MsG0180003494.01.T01:intron 40.0%
CCCAACAAAAATGTGAGTGA+AGG - Chr1:63202676-63202695 MsG0180003494.01.T01:intron 40.0%
CTAAGACCAATGTGGGTTTA+TGG - Chr1:63201880-63201899 MsG0180003494.01.T01:intron 40.0%
CTCTTATAGTTGAGATCGGA+GGG + Chr1:63200863-63200882 None:intergenic 40.0%
GAAAAGCCATGAACAAAGGT+AGG + Chr1:63199950-63199969 None:intergenic 40.0%
GAATCTTCATGTTGCAGAGT+TGG + Chr1:63203587-63203606 None:intergenic 40.0%
GAGATGGGCCTAATAAGATT+AGG + Chr1:63205350-63205369 None:intergenic 40.0%
GAGGGAGAAAGTTAACGATT+GGG + Chr1:63206098-63206117 None:intergenic 40.0%
GAGTTATTCCCTTCAGACAT+TGG + Chr1:63205261-63205280 None:intergenic 40.0%
GCGAGTTTCTTCTTCATGTT+TGG + Chr1:63205438-63205457 None:intergenic 40.0%
GCGTTCATGTTAGATCTTCT+AGG - Chr1:63204445-63204464 MsG0180003494.01.T01:intron 40.0%
GCTGTGATATTAACGACTTC+TGG - Chr1:63203526-63203545 MsG0180003494.01.T01:intron 40.0%
GCTTCGATTAAACTTCATCC+TGG - Chr1:63200427-63200446 MsG0180003494.01.T01:three_prime_UTR 40.0%
GGAGTATAGAAAACCAGAGA+GGG - Chr1:63206241-63206260 MsG0180003494.01.T01:intron 40.0%
GGGTACAAGAAAGAAGGAAA+AGG + Chr1:63205825-63205844 None:intergenic 40.0%
GGTTGACAAGACAACAACAT+TGG - Chr1:63202069-63202088 MsG0180003494.01.T01:intron 40.0%
GTTCATGATGAATGTTGCAG+TGG - Chr1:63202463-63202482 MsG0180003494.01.T01:intron 40.0%
TAGCACTATTGTAGAAGCGA+TGG - Chr1:63206408-63206427 MsG0180003494.01.T01:intron 40.0%
TATATAAGAGGGAGTGGTGA+TGG - Chr1:63200693-63200712 MsG0180003494.01.T01:three_prime_UTR 40.0%
TCAAAAAAGATCCGACCTAC+CGG + Chr1:63205798-63205817 None:intergenic 40.0%
TCACATGGGTTTGTACATGT+AGG - Chr1:63202972-63202991 MsG0180003494.01.T01:intron 40.0%
TCCTATGTACCGTTATCTCA+GGG - Chr1:63203398-63203417 MsG0180003494.01.T01:intron 40.0%
TCCTTCTTTCTTGTACCCAT+TGG - Chr1:63205827-63205846 MsG0180003494.01.T01:intron 40.0%
TCTCTTATAGTTGAGATCGG+AGG + Chr1:63200864-63200883 None:intergenic 40.0%
TGATTGCAGAATGTTAGTGG+TGG - Chr1:63202811-63202830 MsG0180003494.01.T01:intron 40.0%
TGTAATAAGGTGATCCGTTG+AGG + Chr1:63205516-63205535 None:intergenic 40.0%
TGTAGTCAACCCCACATAAT+AGG - Chr1:63206863-63206882 MsG0180003494.01.T01:intron 40.0%
TGTCAATTGCAACCTTCCAT+CGG - Chr1:63203031-63203050 MsG0180003494.01.T01:intron 40.0%
TTAGGGTCGCCAATTCTATA+GGG - Chr1:63203075-63203094 MsG0180003494.01.T01:intron 40.0%
TTAGTAGGTTCTGTAGGAGA+TGG + Chr1:63207466-63207485 None:intergenic 40.0%
TTCAATGTTATAGCAGGACG+GGG - Chr1:63207430-63207449 MsG0180003494.01.T01:five_prime_UTR 40.0%
TTCCATGTTGATCCATGCTT+TGG + Chr1:63200118-63200137 None:intergenic 40.0%
TTCCTATGTACCGTTATCTC+AGG - Chr1:63203397-63203416 MsG0180003494.01.T01:intron 40.0%
! AAATCTATGCGGCTTTTGGT+TGG - Chr1:63206219-63206238 MsG0180003494.01.T01:intron 40.0%
! AGTAGAAGAAGCATACTCGA+TGG - Chr1:63205106-63205125 MsG0180003494.01.T01:intron 40.0%
! ATTCGGCACTGGACTATAAT+TGG - Chr1:63206939-63206958 MsG0180003494.01.T01:CDS 40.0%
! CCAGTGCCGAATAAAACTTA+TGG + Chr1:63206931-63206950 None:intergenic 40.0%
! CTATTTGGGATGCTTCATCA+TGG - Chr1:63201905-63201924 MsG0180003494.01.T01:intron 40.0%
! GCATCGACATTTCAGATTGA+AGG + Chr1:63206683-63206702 None:intergenic 40.0%
! TACTCAGTGAAAGGTGCATA+TGG + Chr1:63199853-63199872 None:intergenic 40.0%
! TAGTGGATGATATGCCCATA+AGG - Chr1:63201824-63201843 MsG0180003494.01.T01:intron 40.0%
! TGAGATAACGGTACATAGGA+AGG + Chr1:63203398-63203417 None:intergenic 40.0%
! TTTAGGGTCGCCAATTCTAT+AGG - Chr1:63203074-63203093 MsG0180003494.01.T01:intron 40.0%
!! AACGACTTCTGGTTTACCAT+AGG - Chr1:63203537-63203556 MsG0180003494.01.T01:intron 40.0%
!! AATCTATGCGGCTTTTGGTT+GGG - Chr1:63206220-63206239 MsG0180003494.01.T01:intron 40.0%
!! ATAGACCTGACTTTGGAACT+TGG + Chr1:63200053-63200072 None:intergenic 40.0%
!! ATTAGGTTGGGTATGTGTGA+AGG - Chr1:63206452-63206471 MsG0180003494.01.T01:intron 40.0%
!! ATTTGGCTTGATAGAACCTC+AGG - Chr1:63200143-63200162 MsG0180003494.01.T01:three_prime_UTR 40.0%
!! CAAGTGCGTGGATTATGTTT+TGG - Chr1:63207280-63207299 MsG0180003494.01.T01:CDS 40.0%
!! GTTAGTCTATGGTCCCTTTT+AGG + Chr1:63202144-63202163 None:intergenic 40.0%
!! TAAACCCACATTGGTCTTAG+TGG + Chr1:63201880-63201899 None:intergenic 40.0%
!! TGGTTGTTGTTGAGTTTTGC+TGG - Chr1:63207253-63207272 MsG0180003494.01.T01:CDS 40.0%
!! TTGGTAACGTAGACGAGATA+TGG + Chr1:63203251-63203270 None:intergenic 40.0%
!!! CCATAAGTTTTATTCGGCAC+TGG - Chr1:63206928-63206947 MsG0180003494.01.T01:CDS 40.0%
!!! TCGTTTTGAGTTTGGCCAAT+GGG + Chr1:63205845-63205864 None:intergenic 40.0%
AAACCGTGTAGAAACTCCGA+TGG + Chr1:63203050-63203069 None:intergenic 45.0%
AAACCTAGTGGCTCTCTTCA+TGG - Chr1:63205164-63205183 MsG0180003494.01.T01:intron 45.0%
AACAGACATCCTTAGGTCAC+TGG - Chr1:63205765-63205784 MsG0180003494.01.T01:intron 45.0%
AGGTTGCAATTGACAGTTGG+AGG + Chr1:63203026-63203045 None:intergenic 45.0%
CACCAAAGCATGGATCAACA+TGG - Chr1:63200113-63200132 MsG0180003494.01.T01:three_prime_UTR 45.0%
CATGTCAGCAAGCACATGAT+GGG - Chr1:63202487-63202506 MsG0180003494.01.T01:intron 45.0%
CCAGGTTTAGTAGGTTCTGT+AGG + Chr1:63207472-63207491 None:intergenic 45.0%
CCATTTCGATCGGGATACTT+TGG - Chr1:63200403-63200422 MsG0180003494.01.T01:three_prime_UTR 45.0%
CCTACAGAACCTACTAAACC+TGG - Chr1:63207469-63207488 MsG0180003494.01.T01:five_prime_UTR 45.0%
CGTTTGTAGAACTACCGAGA+GGG + Chr1:63203223-63203242 None:intergenic 45.0%
CTCCTTCAAGCAATGCCTAT+TGG - Chr1:63200006-63200025 MsG0180003494.01.T01:three_prime_UTR 45.0%
CTTCCATCGGAGTTTCTACA+CGG - Chr1:63203044-63203063 MsG0180003494.01.T01:intron 45.0%
GAAGGCTTAATAGGACATGC+TGG + Chr1:63206271-63206290 None:intergenic 45.0%
GCATGGCTCGACATAAACAA+TGG - Chr1:63206589-63206608 MsG0180003494.01.T01:intron 45.0%
GCCAATGGGTACAAGAAAGA+AGG + Chr1:63205831-63205850 None:intergenic 45.0%
GGAAGGTTGCAATTGACAGT+TGG + Chr1:63203029-63203048 None:intergenic 45.0%
GGTTGCAATTGACAGTTGGA+GGG + Chr1:63203025-63203044 None:intergenic 45.0%
GTCGAATCGTCCATTTCGAT+CGG - Chr1:63200393-63200412 MsG0180003494.01.T01:three_prime_UTR 45.0%
GTGTCAACCGTTTCATACGA+AGG + Chr1:63205041-63205060 None:intergenic 45.0%
GTGTGAGCTGAGTACATGAA+AGG + Chr1:63204208-63204227 None:intergenic 45.0%
TACAACACCAGCAGCATGAT+TGG - Chr1:63206527-63206546 MsG0180003494.01.T01:intron 45.0%
TAGGGGTGAAATTGTTCGGA+GGG + Chr1:63205227-63205246 None:intergenic 45.0%
TATGTACCGTTATCTCAGGG+TGG - Chr1:63203401-63203420 MsG0180003494.01.T01:intron 45.0%
TATTAGGGGTTGGACACCTT+CGG - Chr1:63207045-63207064 MsG0180003494.01.T01:intron 45.0%
TATTCCCTTCAGACATTGGG+AGG + Chr1:63205257-63205276 None:intergenic 45.0%
TCAATGTGCAACTTGACAGC+TGG + Chr1:63202952-63202971 None:intergenic 45.0%
TCATCATGGGCAACAGAAGA+TGG - Chr1:63201919-63201938 MsG0180003494.01.T01:intron 45.0%
TCATGTCAGCAAGCACATGA+TGG - Chr1:63202486-63202505 MsG0180003494.01.T01:intron 45.0%
TCGAATCGTCCATTTCGATC+GGG - Chr1:63200394-63200413 MsG0180003494.01.T01:three_prime_UTR 45.0%
TCGTTTGTAGAACTACCGAG+AGG + Chr1:63203224-63203243 None:intergenic 45.0%
TCTAACAATGAAGCGCATCC+AGG - Chr1:63200597-63200616 MsG0180003494.01.T01:three_prime_UTR 45.0%
TCTACCAACTGAGCTAAGGT+CGG + Chr1:63205724-63205743 None:intergenic 45.0%
TCTTCCTCTCCTCTAGTGAT+TGG + Chr1:63206738-63206757 None:intergenic 45.0%
TGGATGATATGCCCATAAGG+AGG - Chr1:63201827-63201846 MsG0180003494.01.T01:intron 45.0%
TTAGGGGTGAAATTGTTCGG+AGG + Chr1:63205228-63205247 None:intergenic 45.0%
TTCCTTGGGTACCTCCTTAT+GGG + Chr1:63201841-63201860 None:intergenic 45.0%
TTCGCTACTCTAATGCTGAC+CGG + Chr1:63204338-63204357 None:intergenic 45.0%
! ACCCTGAGATAACGGTACAT+AGG + Chr1:63203402-63203421 None:intergenic 45.0%
! AGCATTAATTCGGGGTACTC+TGG + Chr1:63202547-63202566 None:intergenic 45.0%
! CCAAAGTATCCCGATCGAAA+TGG + Chr1:63200406-63200425 None:intergenic 45.0%
! CTCTAAGGAGCAAGTGAACA+GGG + Chr1:63204013-63204032 None:intergenic 45.0%
! GGGAAAATCTATGCGGCTTT+TGG - Chr1:63206215-63206234 MsG0180003494.01.T01:intron 45.0%
! GGGAGTATAGAAAACCAGAG+AGG - Chr1:63206240-63206259 MsG0180003494.01.T01:intron 45.0%
! GTTGGTTCAAAGACACCACA+TGG - Chr1:63202099-63202118 MsG0180003494.01.T01:intron 45.0%
! TCTCTAAGGAGCAAGTGAAC+AGG + Chr1:63204014-63204033 None:intergenic 45.0%
! TTGATGACCAATCATGCTGC+TGG + Chr1:63206537-63206556 None:intergenic 45.0%
! TTGTGCCGGCCATTGTAATT+TGG + Chr1:63200273-63200292 None:intergenic 45.0%
!! ATTGCAGTTTGTGACTCGGT+TGG - Chr1:63203967-63203986 MsG0180003494.01.T01:intron 45.0%
!! GTGATGGACTACTCAGTGAA+AGG + Chr1:63199862-63199881 None:intergenic 45.0%
!! TTAGGTCACTGGTTCGAATC+CGG - Chr1:63205776-63205795 MsG0180003494.01.T01:intron 45.0%
!! TTGCAGTTTGTGACTCGGTT+GGG - Chr1:63203968-63203987 MsG0180003494.01.T01:intron 45.0%
!!! GTCGTTTTGAGTTTGGCCAA+TGG + Chr1:63205846-63205865 None:intergenic 45.0%
!!! AAGTAATTTTTATTTTTATT+TGG - Chr1:63201722-63201741 MsG0180003494.01.T01:intron 5.0%
!!! ATATTTTTATTTTTATTTTG+AGG + Chr1:63205566-63205585 None:intergenic 5.0%
!!! TAATTTTAAATAATAAATCA+AGG + Chr1:63201457-63201476 None:intergenic 5.0%
!!! TTTTTTTTTTAATTTTTCAT+GGG - Chr1:63202261-63202280 MsG0180003494.01.T01:intron 5.0%
!!! TTTTTTTTTTTAATTTTTCA+TGG - Chr1:63202260-63202279 MsG0180003494.01.T01:intron 5.0%
AAGGAGCAAGTGAACAGGGA+AGG + Chr1:63204009-63204028 None:intergenic 50.0%
ACAACCGACCTTAGCTCAGT+TGG - Chr1:63205717-63205736 MsG0180003494.01.T01:intron 50.0%
ACATTGGGAGGCCGATGTTA+GGG + Chr1:63205245-63205264 None:intergenic 50.0%
ACGATTGGGACGAGAAAGAG+AGG + Chr1:63206084-63206103 None:intergenic 50.0%
ACTGGCCAAGTTCCAAAGTC+AGG - Chr1:63200045-63200064 MsG0180003494.01.T01:three_prime_UTR 50.0%
AGGGGTGAAATTGTTCGGAG+GGG + Chr1:63205226-63205245 None:intergenic 50.0%
AGTGAGCCACCCTGAGATAA+CGG + Chr1:63203410-63203429 None:intergenic 50.0%
ATAACTCCTGCAGTGTAGCC+AGG + Chr1:63200448-63200467 None:intergenic 50.0%
CGTCGACATATTCTCCCTCT+CGG - Chr1:63203206-63203225 MsG0180003494.01.T01:intron 50.0%
CGTGTAGAAACTCCGATGGA+AGG + Chr1:63203046-63203065 None:intergenic 50.0%
CTGTCCAATCACTAGAGGAG+AGG - Chr1:63206731-63206750 MsG0180003494.01.T01:CDS 50.0%
CTTCCTTGGGTACCTCCTTA+TGG + Chr1:63201842-63201861 None:intergenic 50.0%
GGATTCGAACCAGTGACCTA+AGG + Chr1:63205777-63205796 None:intergenic 50.0%
GTTGCACAGCCTATGCATCA+CGG - Chr1:63202007-63202026 MsG0180003494.01.T01:intron 50.0%
TAGTTGAGATCGGAGGGAGT+AGG + Chr1:63200857-63200876 None:intergenic 50.0%
TCTCCATGAAGAGAGCCACT+AGG + Chr1:63205170-63205189 None:intergenic 50.0%
TGAACAGGGAAGGCTTGAAG+TGG + Chr1:63203999-63204018 None:intergenic 50.0%
TGGAACTTGGCCAGTAACCA+GGG + Chr1:63200040-63200059 None:intergenic 50.0%
TGTGCAACTTGACAGCTGGT+AGG + Chr1:63202948-63202967 None:intergenic 50.0%
TTGGAACTTGGCCAGTAACC+AGG + Chr1:63200041-63200060 None:intergenic 50.0%
! GAGCACTGTCCAATCACTAG+AGG - Chr1:63206726-63206745 MsG0180003494.01.T01:CDS 50.0%
! GCACATGATGGGAAAGCTCT+TGG - Chr1:63202498-63202517 MsG0180003494.01.T01:intron 50.0%
! GGCCAATAGGCATTGCTTGA+AGG + Chr1:63200011-63200030 None:intergenic 50.0%
!! CCTTAGCTCAGTTGGTAGAG+CGG - Chr1:63205725-63205744 MsG0180003494.01.T01:intron 50.0%
!! TGATCCATGCTTTGGTGCTG+AGG + Chr1:63200110-63200129 None:intergenic 50.0%
ACGACACCACCGTGATGCAT+AGG + Chr1:63202019-63202038 None:intergenic 55.0%
ATAGCAGGACGGGGCAATGT+TGG - Chr1:63207439-63207458 MsG0180003494.01.T01:five_prime_UTR 55.0%
ATCGGCCTCCCAATGTCTGA+AGG - Chr1:63205249-63205268 MsG0180003494.01.T01:intron 55.0%
CATTGGGAGGCCGATGTTAG+GGG + Chr1:63205244-63205263 None:intergenic 55.0%
CCGCTCTACCAACTGAGCTA+AGG + Chr1:63205728-63205747 None:intergenic 55.0%
CTTCATCCTGGCTACACTGC+AGG - Chr1:63200439-63200458 MsG0180003494.01.T01:three_prime_UTR 55.0%
GACATTGGGAGGCCGATGTT+AGG + Chr1:63205246-63205265 None:intergenic 55.0%
GGAACTTGGCCAGTAACCAG+GGG + Chr1:63200039-63200058 None:intergenic 55.0%
GGGGTTGTTAGCCGAGATGT+AGG + Chr1:63205207-63205226 None:intergenic 55.0%
GTAGAGCGGAGGACTGTAGT+TGG - Chr1:63205739-63205758 MsG0180003494.01.T01:intron 55.0%
TCGGCCTCCCAATGTCTGAA+GGG - Chr1:63205250-63205269 MsG0180003494.01.T01:intron 55.0%
TGGGCAGCTCCTCTACATCA+AGG - Chr1:63207516-63207535 MsG0180003494.01.T01:five_prime_UTR 55.0%
TGTCAACCCACCGACCGATA+CGG + Chr1:63202057-63202076 None:intergenic 55.0%
TTTGCGCGCACGTGTGTGTA+TGG + Chr1:63204897-63204916 None:intergenic 55.0%
TTTGCTGGCCAACAAGTGCG+TGG - Chr1:63207268-63207287 MsG0180003494.01.T01:CDS 55.0%
! CAGGGTGTCTGTGTGAGTGA+TGG + Chr1:63199878-63199897 None:intergenic 55.0%
! CTGGTTCGAATCCGGTAGGT+CGG - Chr1:63205784-63205803 MsG0180003494.01.T01:intron 55.0%
!! GTCACTGGTTCGAATCCGGT+AGG - Chr1:63205780-63205799 MsG0180003494.01.T01:intron 55.0%
!! TAGCTCAGTTGGTAGAGCGG+AGG - Chr1:63205728-63205747 MsG0180003494.01.T01:intron 55.0%
!! TGCCCATAAGGAGGTACCCA+AGG - Chr1:63201836-63201855 MsG0180003494.01.T01:intron 55.0%
!! TTTGGTGCTGAGGACCCCAA+AGG + Chr1:63200100-63200119 None:intergenic 55.0%
ACATGCTGGAGAGCCCTCTC+TGG + Chr1:63206257-63206276 None:intergenic 60.0%
ACCAGGGGAAGGTGGCCAAT+AGG + Chr1:63200024-63200043 None:intergenic 60.0%
CTTGGCCAGTAACCAGGGGA+AGG + Chr1:63200035-63200054 None:intergenic 60.0%
GCACAGCCTATGCATCACGG+TGG - Chr1:63202010-63202029 MsG0180003494.01.T01:intron 60.0%
GGGTCCTCAGCACCAAAGCA+TGG - Chr1:63200103-63200122 MsG0180003494.01.T01:three_prime_UTR 60.0%
!! TGCATCACGGTGGTGTCGTC+CGG - Chr1:63202020-63202039 MsG0180003494.01.T01:intron 60.0%
GCCTATTGGCCACCTTCCCC+TGG - Chr1:63200020-63200039 MsG0180003494.01.T01:three_prime_UTR 65.0%
GGCCACCTTCCCCTGGTTAC+TGG - Chr1:63200027-63200046 MsG0180003494.01.T01:three_prime_UTR 65.0%
GGCCAGTAACCAGGGGAAGG+TGG + Chr1:63200032-63200051 None:intergenic 65.0%
ACCCACCGACCGATACGGCG+AGG + Chr1:63202052-63202071 None:intergenic 70.0%
! CACGGCCTCGCCGTATCGGT+CGG - Chr1:63202044-63202063 MsG0180003494.01.T01:intron 70.0%
! GCCTCGCCGTATCGGTCGGT+GGG - Chr1:63202048-63202067 MsG0180003494.01.T01:intron 70.0%
!! ACGGTGGTGTCGTCCGGCCA+CGG - Chr1:63202026-63202045 MsG0180003494.01.T01:intron 70.0%
CGACCGATACGGCGAGGCCG+TGG + Chr1:63202046-63202065 None:intergenic 75.0%
CGATACGGCGAGGCCGTGGC+CGG + Chr1:63202042-63202061 None:intergenic 75.0%
CGGCCACGGCCTCGCCGTAT+CGG - Chr1:63202040-63202059 MsG0180003494.01.T01:intron 75.0%
! GGCCTCGCCGTATCGGTCGG+TGG - Chr1:63202047-63202066 MsG0180003494.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 63199841 63207542 63199841 ID=MsG0180003494.01;Name=MsG0180003494.01
Chr1 mRNA 63199841 63207542 63199841 ID=MsG0180003494.01.T01;Parent=MsG0180003494.01;Name=MsG0180003494.01.T01;_AED=0.49;_eAED=0.50;_QI=119|0.5|0.42|1|0.66|0.57|7|1229|297
Chr1 exon 63199841 63201168 63199841 ID=MsG0180003494.01.T01:exon:50054;Parent=MsG0180003494.01.T01
Chr1 exon 63201246 63201322 63201246 ID=MsG0180003494.01.T01:exon:50053;Parent=MsG0180003494.01.T01
Chr1 exon 63204843 63204900 63204843 ID=MsG0180003494.01.T01:exon:50052;Parent=MsG0180003494.01.T01
Chr1 exon 63205318 63205556 63205318 ID=MsG0180003494.01.T01:exon:50051;Parent=MsG0180003494.01.T01
Chr1 exon 63206675 63206789 63206675 ID=MsG0180003494.01.T01:exon:50050;Parent=MsG0180003494.01.T01
Chr1 exon 63206903 63207003 63206903 ID=MsG0180003494.01.T01:exon:50049;Parent=MsG0180003494.01.T01
Chr1 exon 63207219 63207542 63207219 ID=MsG0180003494.01.T01:exon:50048;Parent=MsG0180003494.01.T01
Chr1 five_prime_UTR 63207424 63207542 63207424 ID=MsG0180003494.01.T01:five_prime_utr;Parent=MsG0180003494.01.T01
Chr1 CDS 63207219 63207423 63207219 ID=MsG0180003494.01.T01:cds;Parent=MsG0180003494.01.T01
Chr1 CDS 63206903 63207003 63206903 ID=MsG0180003494.01.T01:cds;Parent=MsG0180003494.01.T01
Chr1 CDS 63206675 63206789 63206675 ID=MsG0180003494.01.T01:cds;Parent=MsG0180003494.01.T01
Chr1 CDS 63205318 63205556 63205318 ID=MsG0180003494.01.T01:cds;Parent=MsG0180003494.01.T01
Chr1 CDS 63204843 63204900 63204843 ID=MsG0180003494.01.T01:cds;Parent=MsG0180003494.01.T01
Chr1 CDS 63201246 63201322 63201246 ID=MsG0180003494.01.T01:cds;Parent=MsG0180003494.01.T01
Chr1 CDS 63201070 63201168 63201070 ID=MsG0180003494.01.T01:cds;Parent=MsG0180003494.01.T01
Chr1 three_prime_UTR 63199841 63201069 63199841 ID=MsG0180003494.01.T01:three_prime_utr;Parent=MsG0180003494.01.T01
Gene Sequence

>MsG0180003494.01.T01

ATGGCTTTTCCTTTCATATTTCTCTTTGCTAGTTTATTCTTTATTGCTCCTTCAAGCAATGCCTATTGGCCACCTTCCCCTGGTTACTGGCCAAGTTCCAAAGTCAGGTCTATGAGCTTTTACAATGGTTATAGAAACCTTTGGGGTCCTCAGCACCAAAGCATGGATCAACATGGAACAACAATTTGGCTTGATAGAACCTCAGGAAGTGGATTCAAGTCGAATCGTCCATTTCGATCGGGATACTTTGGCGCTTCGATTAAACTTCATCCTGGCTACACTGCAGGAGTTATAACAGCTTTTTATCTTTCTAACAATGAAGCGCATCCAGGATTTCATGATGAAGTAGACATTGAATTTCTAGGGACAACATTTGGAAAGCCTTATACTTTGCAGACAAATGTTTATATAAGAGGGAGTGTGGATGATATGCCCATAAGGAGGTACCCAAGGAAGAGTGATGCAACATTTCCACTAAGACCAATGTGGGTTTATGGTTCTATTTGGGATGCTTCATCATGGGCAACAGAAGATGGAAAATACAAAGCTGATTACAAATACCAACCTTTTGTTGCAAAGTACACAAACTTCAAAGCTAGTGGTTGCACAGCCTATGCATCACGGTGGTGTCGTCCGGCCACGGCCTCGCCGTATCGGTCGTGGTCATGTCAGCAAGCACATGATGGGAAAGCTCTTGGTAGTGCTAGAAAAAATGACAGTTGCTTGGTTTGTTTGGTGCCTCTCTTTCTCGTCCCAATCGTTAACTTTCTCCCTCTTCTCTTCGATTTTCTAAAGGGGAAAATCTATGCGGCTTTTGGTTGGGAGTATAGAAAACCAGAGAGGGCTCTCCAGCATGTCCTATTAAGCCTTCAAAACATACTATTAATAAAGTGA
Protein sequence

>MsG0180003494.01.T01

MAFPFIFLFASLFFIAPSSNAYWPPSPGYWPSSKVRSMSFYNGYRNLWGPQHQSMDQHGTTIWLDRTSGSGFKSNRPFRSGYFGASIKLHPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSVDDMPIRRYPRKSDATFPLRPMWVYGSIWDASSWATEDGKYKADYKYQPFVAKYTNFKASGCTAYASRWCRPATASPYRSWSCQQAHDGKALGSARKNDSCLVCLVPLFLVPIVNFLPLLFDFLKGKIYAAFGWEYRKPERALQHVLLSLQNILLIK*