Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005816.01.T01 | XP_013470066.3 | 97.549 | 204 | 5 | 0 | 1 | 204 | 1 | 204 | 2.54E-140 | 400 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005816.01.T01 | Q9LT71 | 54.359 | 195 | 81 | 1 | 10 | 204 | 14 | 200 | 3.70E-65 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005816.01.T01 | I3T8E3 | 97.549 | 204 | 5 | 0 | 1 | 204 | 1 | 204 | 1.21e-140 | 400 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180003757.01 | MsG0180005816.01 | -0.807000 | 6.259889e-50 | 3.447088e-47 |
| MsG0180005816.01 | MsG0280010143.01 | -0.801562 | 8.490251e-49 | 4.067303e-46 |
| MsG0180005816.01 | MsG0280010780.01 | -0.821408 | 4.102998e-53 | 3.335148e-50 |
| MsG0180005816.01 | MsG0280011301.01 | -0.815157 | 1.067423e-51 | 7.302504e-49 |
| MsG0180005816.01 | MsG0380012281.01 | -0.803874 | 2.831006e-49 | 1.438734e-46 |
| MsG0180005816.01 | MsG0380013473.01 | -0.809604 | 1.742968e-50 | 1.027932e-47 |
| MsG0180005816.01 | MsG0380013921.01 | -0.820828 | 5.579377e-53 | 4.462858e-50 |
| MsG0180005816.01 | MsG0380013954.01 | -0.810477 | 1.130250e-50 | 6.820123e-48 |
| MsG0180005816.01 | MsG0380014032.01 | -0.801027 | 1.092685e-48 | 5.164822e-46 |
| MsG0180005816.01 | MsG0380016835.01 | -0.803862 | 2.846156e-49 | 1.445998e-46 |
| MsG0180005816.01 | MsG0380016931.01 | -0.811108 | 8.256141e-51 | 5.066305e-48 |
| MsG0180005816.01 | MsG0380017962.01 | -0.803229 | 3.851811e-49 | 1.925192e-46 |
| MsG0180005816.01 | MsG0480022765.01 | -0.842273 | 2.859459e-58 | 4.313060e-55 |
| MsG0180005816.01 | MsG0480023187.01 | -0.821272 | 4.410467e-53 | 3.571453e-50 |
| MsG0180005816.01 | MsG0580024309.01 | -0.811148 | 8.091703e-51 | 4.970618e-48 |
| MsG0180005816.01 | MsG0580024678.01 | -0.804003 | 2.660597e-49 | 1.356605e-46 |
| MsG0180005816.01 | MsG0680030439.01 | -0.816837 | 4.500396e-52 | 3.223994e-49 |
| MsG0180005816.01 | MsG0680030635.01 | -0.806263 | 8.955945e-50 | 4.839573e-47 |
| MsG0180005816.01 | MsG0680031813.01 | -0.809563 | 1.779169e-50 | 1.048084e-47 |
| MsG0180005816.01 | MsG0680034229.01 | -0.817037 | 4.057891e-52 | 2.922969e-49 |
| MsG0180005816.01 | MsG0780036064.01 | -0.803427 | 3.503506e-49 | 1.760114e-46 |
| MsG0180005816.01 | MsG0780036068.01 | -0.810438 | 1.152474e-50 | 6.946734e-48 |
| MsG0180005816.01 | MsG0780039821.01 | -0.808962 | 2.393433e-50 | 1.387444e-47 |
| MsG0180005816.01 | MsG0780040121.01 | -0.812170 | 4.851830e-51 | 3.062654e-48 |
| MsG0180005816.01 | MsG0780040621.01 | 0.807206 | 5.661351e-50 | 3.134318e-47 |
| MsG0180005816.01 | MsG0780041720.01 | -0.820787 | 5.703524e-53 | 4.556734e-50 |
| MsG0180005816.01 | MsG0880043185.01 | 0.807658 | 4.538413e-50 | 2.542283e-47 |
| MsG0180005816.01 | MsG0880045413.01 | -0.803306 | 3.713292e-49 | 1.859602e-46 |
| MsG0180005816.01 | MsG0880046219.01 | -0.802918 | 4.466828e-49 | 2.214992e-46 |
| MsG0180005816.01 | MsG0880046469.01 | -0.801843 | 7.435189e-49 | 3.587451e-46 |
| MsG0180005816.01 | MsG0880046832.01 | 0.827657 | 1.385993e-54 | 1.346521e-51 |
| MsG0180005816.01 | MsG0880047318.01 | -0.815345 | 9.694023e-52 | 6.666623e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005816.01.T01 | MTR_1g107445 | 97.549 | 204 | 5 | 0 | 1 | 204 | 1 | 204 | 3.08e-144 | 400 |
| MsG0180005816.01.T01 | MTR_8g099060 | 37.113 | 194 | 122 | 0 | 9 | 202 | 65 | 258 | 8.37e-39 | 134 |
| MsG0180005816.01.T01 | MTR_8g028450 | 35.025 | 197 | 124 | 1 | 9 | 201 | 69 | 265 | 2.37e-33 | 120 |
| MsG0180005816.01.T01 | MTR_4g014700 | 38.693 | 199 | 122 | 0 | 5 | 203 | 10 | 208 | 1.06e-31 | 114 |
| MsG0180005816.01.T01 | MTR_3g449880 | 37.288 | 177 | 111 | 0 | 9 | 185 | 50 | 226 | 1.73e-31 | 115 |
| MsG0180005816.01.T01 | MTR_1g099500 | 34.409 | 186 | 122 | 0 | 9 | 194 | 58 | 243 | 6.81e-31 | 113 |
| MsG0180005816.01.T01 | MTR_1g109630 | 28.571 | 196 | 136 | 1 | 9 | 204 | 15 | 206 | 3.91e-28 | 105 |
| MsG0180005816.01.T01 | MTR_5g090340 | 34.343 | 198 | 124 | 2 | 9 | 204 | 94 | 287 | 4.17e-28 | 107 |
| MsG0180005816.01.T01 | MTR_5g090340 | 34.343 | 198 | 124 | 2 | 9 | 204 | 97 | 290 | 4.46e-28 | 107 |
| MsG0180005816.01.T01 | MTR_3g449880 | 35.088 | 171 | 111 | 0 | 15 | 185 | 34 | 204 | 5.91e-27 | 102 |
| MsG0180005816.01.T01 | MTR_6g012460 | 34.409 | 186 | 122 | 0 | 17 | 202 | 12 | 197 | 2.37e-26 | 100 |
| MsG0180005816.01.T01 | MTR_5g018250 | 26.368 | 201 | 143 | 1 | 9 | 204 | 24 | 224 | 4.23e-25 | 97.8 |
| MsG0180005816.01.T01 | MTR_5g018080 | 28.986 | 138 | 98 | 0 | 21 | 158 | 18 | 155 | 3.71e-19 | 80.9 |
| MsG0180005816.01.T01 | MTR_5g018190 | 28.767 | 146 | 104 | 0 | 22 | 167 | 284 | 429 | 3.47e-18 | 82.0 |
| MsG0180005816.01.T01 | MTR_6g012460 | 37.879 | 132 | 82 | 0 | 17 | 148 | 12 | 143 | 9.02e-17 | 75.9 |
| MsG0180005816.01.T01 | MTR_5g018110 | 27.536 | 138 | 100 | 0 | 21 | 158 | 344 | 481 | 8.63e-16 | 75.5 |
| MsG0180005816.01.T01 | MTR_3g062910 | 28.659 | 164 | 117 | 0 | 5 | 168 | 50 | 213 | 1.28e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005816.01.T01 | AT3G19460 | 54.359 | 195 | 81 | 1 | 10 | 204 | 14 | 200 | 3.78e-66 | 202 |
| MsG0180005816.01.T01 | AT3G19460 | 54.359 | 195 | 81 | 1 | 10 | 204 | 14 | 200 | 3.78e-66 | 202 |
| MsG0180005816.01.T01 | AT3G19460 | 54.359 | 195 | 81 | 1 | 10 | 204 | 14 | 200 | 3.78e-66 | 202 |
| MsG0180005816.01.T01 | AT2G15280 | 48.485 | 198 | 101 | 1 | 8 | 204 | 4 | 201 | 1.11e-63 | 196 |
| MsG0180005816.01.T01 | AT3G19460 | 46.725 | 229 | 80 | 2 | 10 | 204 | 14 | 234 | 1.38e-60 | 189 |
| MsG0180005816.01.T01 | AT3G19460 | 46.725 | 229 | 80 | 2 | 10 | 204 | 14 | 234 | 1.38e-60 | 189 |
| MsG0180005816.01.T01 | AT3G19460 | 46.606 | 221 | 76 | 2 | 18 | 204 | 6 | 218 | 8.63e-57 | 179 |
| MsG0180005816.01.T01 | AT3G19460 | 46.606 | 221 | 76 | 2 | 18 | 204 | 6 | 218 | 8.63e-57 | 179 |
| MsG0180005816.01.T01 | AT2G15280 | 39.394 | 198 | 80 | 2 | 8 | 204 | 4 | 162 | 3.61e-43 | 142 |
| MsG0180005816.01.T01 | AT4G23630 | 36.735 | 196 | 120 | 2 | 9 | 202 | 80 | 273 | 6.33e-36 | 127 |
| MsG0180005816.01.T01 | AT4G23630 | 36.735 | 196 | 120 | 2 | 9 | 202 | 80 | 273 | 6.33e-36 | 127 |
| MsG0180005816.01.T01 | AT3G61560 | 35.751 | 193 | 124 | 0 | 9 | 201 | 59 | 251 | 4.33e-34 | 122 |
| MsG0180005816.01.T01 | AT3G61560 | 35.751 | 193 | 124 | 0 | 9 | 201 | 59 | 251 | 4.33e-34 | 122 |
| MsG0180005816.01.T01 | AT2G46170 | 36.269 | 193 | 123 | 0 | 9 | 201 | 59 | 251 | 1.41e-33 | 120 |
| MsG0180005816.01.T01 | AT3G10915 | 33.333 | 198 | 132 | 0 | 5 | 202 | 28 | 225 | 1.80e-33 | 119 |
| MsG0180005816.01.T01 | AT5G41600 | 34.500 | 200 | 123 | 3 | 9 | 202 | 59 | 256 | 3.69e-33 | 119 |
| MsG0180005816.01.T01 | AT3G10915 | 33.503 | 197 | 131 | 0 | 5 | 201 | 53 | 249 | 3.77e-33 | 119 |
| MsG0180005816.01.T01 | AT4G11220 | 31.443 | 194 | 133 | 0 | 9 | 202 | 76 | 269 | 6.56e-33 | 119 |
| MsG0180005816.01.T01 | AT3G10915 | 33.668 | 199 | 131 | 1 | 5 | 202 | 28 | 226 | 1.66e-32 | 117 |
| MsG0180005816.01.T01 | AT1G64090 | 34.031 | 191 | 126 | 0 | 9 | 199 | 55 | 245 | 5.70e-32 | 116 |
| MsG0180005816.01.T01 | AT3G18260 | 31.818 | 198 | 134 | 1 | 5 | 202 | 27 | 223 | 6.78e-32 | 115 |
| MsG0180005816.01.T01 | AT3G10260 | 34.848 | 198 | 125 | 3 | 9 | 204 | 52 | 247 | 1.78e-31 | 115 |
| MsG0180005816.01.T01 | AT3G10260 | 34.848 | 198 | 125 | 3 | 9 | 204 | 52 | 247 | 1.78e-31 | 115 |
| MsG0180005816.01.T01 | AT3G10260 | 34.848 | 198 | 125 | 3 | 9 | 204 | 72 | 267 | 2.01e-31 | 115 |
| MsG0180005816.01.T01 | AT3G54120 | 43.210 | 162 | 88 | 2 | 8 | 167 | 14 | 173 | 1.11e-29 | 109 |
| MsG0180005816.01.T01 | AT3G10915 | 33.158 | 190 | 127 | 0 | 12 | 201 | 2 | 191 | 1.11e-29 | 108 |
| MsG0180005816.01.T01 | AT1G64090 | 34.078 | 179 | 118 | 0 | 18 | 196 | 80 | 258 | 1.27e-29 | 110 |
| MsG0180005816.01.T01 | AT3G10915 | 33.152 | 184 | 123 | 0 | 19 | 202 | 10 | 193 | 2.68e-29 | 108 |
| MsG0180005816.01.T01 | AT3G10915 | 33.333 | 186 | 123 | 1 | 17 | 201 | 62 | 247 | 7.48e-28 | 105 |
| MsG0180005816.01.T01 | AT3G61560 | 39.716 | 141 | 85 | 0 | 9 | 149 | 59 | 199 | 2.81e-27 | 103 |
| MsG0180005816.01.T01 | AT4G01230 | 33.333 | 189 | 119 | 4 | 9 | 195 | 61 | 244 | 3.04e-21 | 88.2 |
| MsG0180005816.01.T01 | AT4G01230 | 32.804 | 189 | 118 | 5 | 9 | 195 | 61 | 242 | 4.59e-19 | 82.4 |
| MsG0180005816.01.T01 | AT3G10915 | 33.333 | 123 | 82 | 0 | 5 | 127 | 28 | 150 | 6.35e-19 | 80.1 |
| MsG0180005816.01.T01 | AT2G46170 | 35.714 | 112 | 72 | 0 | 9 | 120 | 59 | 170 | 1.29e-17 | 77.4 |
| MsG0180005816.01.T01 | AT2G23640 | 23.196 | 194 | 145 | 1 | 15 | 204 | 13 | 206 | 2.93e-16 | 74.3 |
| MsG0180005816.01.T01 | AT1G68230 | 26.904 | 197 | 138 | 2 | 9 | 203 | 22 | 214 | 9.72e-16 | 73.2 |
| MsG0180005816.01.T01 | AT1G68230 | 31.690 | 142 | 91 | 2 | 9 | 148 | 22 | 159 | 9.44e-12 | 61.2 |
Find 81 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTGATGTACTGCAAATT+TGG | 0.179244 | 1:+96538878 | MsG0180005816.01.T01:CDS |
| ATTACTGATTAAACAATTTC+AGG | 0.202496 | 1:-96540457 | None:intergenic |
| TTGTTGTGATTCTGTTTCTA+TGG | 0.238941 | 1:+96538374 | MsG0180005816.01.T01:CDS |
| ATCAAAGCTCTTTGTCGATT+TGG | 0.264424 | 1:-96540192 | None:intergenic |
| GTGGCTATTTCTTTCGGTTT+TGG | 0.266498 | 1:-96537898 | None:intergenic |
| TCTTGTACTTGCTTACTGTT+AGG | 0.352429 | 1:+96540573 | MsG0180005816.01.T01:three_prime_UTR |
| TCTGCCTGATCTGGAGATTT+CGG | 0.363024 | 1:+96538837 | MsG0180005816.01.T01:CDS |
| ACTTCCTCCTCTGCCTGATC+TGG | 0.365713 | 1:+96538828 | MsG0180005816.01.T01:CDS |
| TTCAAATAGGAATGCTGGTC+TGG | 0.367980 | 1:+96540511 | MsG0180005816.01.T01:three_prime_UTR |
| GAGGTTCTACCATGGCGATT+GGG | 0.368950 | 1:-96538003 | None:intergenic |
| ACTGCAAATTTGGCTAAATC+AGG | 0.373614 | 1:+96538888 | MsG0180005816.01.T01:CDS |
| AAGCTGCTAATCTTCTTAAC+AGG | 0.392636 | 1:+96538401 | MsG0180005816.01.T01:CDS |
| CGCAACAAATGGAGTATTTG+AGG | 0.395015 | 1:+96540100 | MsG0180005816.01.T01:three_prime_UTR |
| GTTACGGTGGCTATTTCTTT+CGG | 0.396283 | 1:-96537904 | None:intergenic |
| CACATGATATAGCAATTAAC+AGG | 0.396290 | 1:+96538923 | MsG0180005816.01.T01:CDS |
| CACGCTCTCGGCTCTGGCTT+AGG | 0.400873 | 1:+96538043 | MsG0180005816.01.T01:CDS |
| TATTTAAATTGACAGAGTTC+AGG | 0.403601 | 1:+96540645 | MsG0180005816.01.T01:three_prime_UTR |
| TTGTTGACAATATCTTATAT+TGG | 0.407398 | 1:+96539088 | MsG0180005816.01.T01:CDS |
| GTTCATCACGCTCTCGGCTC+TGG | 0.414137 | 1:+96538037 | MsG0180005816.01.T01:CDS |
| TGGTTAACTGAAGTCTAGTT+AGG | 0.431882 | 1:+96540061 | MsG0180005816.01.T01:three_prime_UTR |
| TGAGGTTCTACCATGGCGAT+TGG | 0.434427 | 1:-96538004 | None:intergenic |
| TTGGCTAAATCAGGCTTTGT+CGG | 0.437383 | 1:+96538897 | MsG0180005816.01.T01:CDS |
| ATTGACAGAGTTCAGGTTTG+TGG | 0.441510 | 1:+96540652 | MsG0180005816.01.T01:three_prime_UTR |
| ACTTGGTGAATCAGGTTGTT+GGG | 0.454940 | 1:+96539062 | MsG0180005816.01.T01:intron |
| TTCTCCGAAATCTCCAGATC+AGG | 0.456361 | 1:-96538841 | None:intergenic |
| AAACGATAAGAAATTGTAAC+CGG | 0.457016 | 1:-96538329 | None:intergenic |
| ACAGATGGATGCGCAACAAA+TGG | 0.457805 | 1:+96540089 | MsG0180005816.01.T01:three_prime_UTR |
| AAGGAGTGCTGTTAGAGTTA+CGG | 0.467158 | 1:-96537926 | None:intergenic |
| TGTTGTGATTCTGTTTCTAT+GGG | 0.474872 | 1:+96538375 | MsG0180005816.01.T01:CDS |
| AGGTTCTACCATGGCGATTG+GGG | 0.475508 | 1:-96538002 | None:intergenic |
| TCACTAATCATGAGTTAAAA+CGG | 0.477999 | 1:-96540150 | None:intergenic |
| TGGTATCTGTTCGAGCGAGC+CGG | 0.484056 | 1:+96538310 | MsG0180005816.01.T01:CDS |
| TGCTGTTAGAGTTACGGTTA+CGG | 0.484777 | 1:-96537920 | None:intergenic |
| ATGTGTTGCTATGGAAGAAT+TGG | 0.489319 | 1:+96538248 | MsG0180005816.01.T01:CDS |
| TACATATGTAGATCAAAGTC+AGG | 0.491717 | 1:-96539126 | None:intergenic |
| AGATCAGGCAGAGGAGGAAG+TGG | 0.496919 | 1:-96538826 | None:intergenic |
| TTTAGGATGGTAGTATGGCA+TGG | 0.510650 | 1:+96540388 | MsG0180005816.01.T01:three_prime_UTR |
| CAAAGAAAAGAAAGTGCAGT+AGG | 0.516683 | 1:+96539394 | MsG0180005816.01.T01:CDS |
| AACTTGGTGAATCAGGTTGT+TGG | 0.517512 | 1:+96539061 | MsG0180005816.01.T01:intron |
| ACACAATATCTCACCACCTC+AGG | 0.524280 | 1:+96540547 | MsG0180005816.01.T01:three_prime_UTR |
| TCTTCTCATCAATTCGATCC+TGG | 0.524568 | 1:-96539289 | None:intergenic |
| TTGTATTTGCTGTTATGTGT+TGG | 0.524946 | 1:+96540622 | MsG0180005816.01.T01:three_prime_UTR |
| CAGAAGAGGGTGGAAAAGAA+AGG | 0.526038 | 1:+96540329 | MsG0180005816.01.T01:three_prime_UTR |
| ATCTCCAGATCAGGCAGAGG+AGG | 0.526888 | 1:-96538832 | None:intergenic |
| CACAGTATCAAAAGATTCGC+AGG | 0.529807 | 1:+96539339 | MsG0180005816.01.T01:CDS |
| TCATATAAAGCATCTTCCAT+TGG | 0.530125 | 1:-96540250 | None:intergenic |
| TTTGAAATTCAGTGTGCAGA+TGG | 0.530237 | 1:+96540041 | MsG0180005816.01.T01:intron |
| GAATTTGTTTCTCTGTGCAC+AGG | 0.543756 | 1:+96538945 | MsG0180005816.01.T01:CDS |
| ATTTCCGTTCATCACGCTCT+CGG | 0.545560 | 1:+96538031 | MsG0180005816.01.T01:CDS |
| GAGAAGATTCATGTGGTACA+TGG | 0.548698 | 1:+96539305 | MsG0180005816.01.T01:CDS |
| ACTCATGAGAACTTGCACAT+TGG | 0.550565 | 1:+96540357 | MsG0180005816.01.T01:three_prime_UTR |
| TCACTGCTTACAAGAGGAAA+CGG | 0.551102 | 1:-96537854 | None:intergenic |
| CTTGGTGAATCAGGTTGTTG+GGG | 0.553448 | 1:+96539063 | MsG0180005816.01.T01:intron |
| CTGGTACTTGTCATATGCCA+CGG | 0.562166 | 1:-96539270 | None:intergenic |
| CGTGGCATATGACAAGTACC+AGG | 0.566409 | 1:+96539271 | MsG0180005816.01.T01:CDS |
| CCAGAGTGAACCTAAAACAA+GGG | 0.580786 | 1:-96540296 | None:intergenic |
| CTGGATTAGATTACCAGAAG+AGG | 0.584920 | 1:+96540315 | MsG0180005816.01.T01:three_prime_UTR |
| TCTAGTTAGGAGCATACAGA+TGG | 0.588325 | 1:+96540074 | MsG0180005816.01.T01:three_prime_UTR |
| TCTTAGCTTGTCTCTTCCCG+TGG | 0.595833 | 1:+96539253 | MsG0180005816.01.T01:CDS |
| TGGTACTTGTCATATGCCAC+GGG | 0.597209 | 1:-96539269 | None:intergenic |
| CGAGATGTTAAACGTAGAGA+AGG | 0.598471 | 1:-96537945 | None:intergenic |
| TAGTTGCTGATGTGTTGCTA+TGG | 0.599011 | 1:+96538239 | MsG0180005816.01.T01:intron |
| AGAGCCGAGAGCGTGATGAA+CGG | 0.602600 | 1:-96538035 | None:intergenic |
| TCCAGAGTGAACCTAAAACA+AGG | 0.605162 | 1:-96540297 | None:intergenic |
| AGAAGATTCATGTGGTACAT+GGG | 0.608693 | 1:+96539306 | MsG0180005816.01.T01:CDS |
| TGGATTAGATTACCAGAAGA+GGG | 0.618387 | 1:+96540316 | MsG0180005816.01.T01:three_prime_UTR |
| TGATTTCTGCAACCACATTG+TGG | 0.618418 | 1:+96538290 | MsG0180005816.01.T01:CDS |
| CTATGGAAGAATTGGCGTGG+AGG | 0.619260 | 1:+96538256 | MsG0180005816.01.T01:CDS |
| TCTTCATCACTGCTTACAAG+AGG | 0.623008 | 1:-96537860 | None:intergenic |
| GGTTCTACCATGGCGATTGG+GGG | 0.634871 | 1:-96538001 | None:intergenic |
| GAAATCTCCAGATCAGGCAG+AGG | 0.635921 | 1:-96538835 | None:intergenic |
| AGCAAGTACAAGATAACCTG+AGG | 0.663997 | 1:-96540563 | None:intergenic |
| TGATGAACGGAAATTCGTTG+AGG | 0.664061 | 1:-96538022 | None:intergenic |
| ATTAGATTACCAGAAGAGGG+TGG | 0.667915 | 1:+96540319 | MsG0180005816.01.T01:three_prime_UTR |
| AAGTACAAGATAACCTGAGG+TGG | 0.668444 | 1:-96540560 | None:intergenic |
| TTGCTATGGAAGAATTGGCG+TGG | 0.691195 | 1:+96538253 | MsG0180005816.01.T01:CDS |
| TGTTAGAGTTACGGTTACGG+TGG | 0.704861 | 1:-96537917 | None:intergenic |
| AATTCGTTGAGGTTCTACCA+TGG | 0.708123 | 1:-96538011 | None:intergenic |
| AATTGATGAGAAGATTCATG+TGG | 0.715992 | 1:+96539298 | MsG0180005816.01.T01:CDS |
| AAAATTTGCAGTATACACAG+TGG | 0.739630 | 1:-96540482 | None:intergenic |
| CTCGAACAGATACCACAATG+TGG | 0.752392 | 1:-96538302 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATAATTTCAATCAT+AGG | - | Chr1:96538793-96538812 | None:intergenic | 10.0% |
| !!! | AAATTTTTACTTTTTCAAAT+AGG | + | Chr1:96540498-96540517 | MsG0180005816.01.T01:three_prime_UTR | 10.0% |
| !!! | TGGTTTTTATTCTAATAATT+TGG | + | Chr1:96539953-96539972 | MsG0180005816.01.T01:intron | 15.0% |
| !! | AAATCATAGAAAAGTTTAAG+AGG | + | Chr1:96539784-96539803 | MsG0180005816.01.T01:intron | 20.0% |
| !! | TTCTATCTTGAAAACAAAAT+CGG | + | Chr1:96538185-96538204 | MsG0180005816.01.T01:intron | 20.0% |
| !! | TTGTTGACAATATCTTATAT+TGG | + | Chr1:96539088-96539107 | MsG0180005816.01.T01:CDS | 20.0% |
| !!! | ATTACTGATTAAACAATTTC+AGG | - | Chr1:96540460-96540479 | None:intergenic | 20.0% |
| !!! | TACATAATATTTTGTTCCAA+CGG | - | Chr1:96539685-96539704 | None:intergenic | 20.0% |
| ! | AAACGATAAGAAATTGTAAC+CGG | - | Chr1:96538332-96538351 | None:intergenic | 25.0% |
| ! | ACGAGATTAATTGGAAATTT+AGG | - | Chr1:96538480-96538499 | None:intergenic | 25.0% |
| ! | AGTGTAAGTAAGAAAACTAA+AGG | - | Chr1:96538124-96538143 | None:intergenic | 25.0% |
| ! | CATGAATCGAATTATAAACA+AGG | - | Chr1:96538157-96538176 | None:intergenic | 25.0% |
| ! | TATAAAACATCTGTTGCATT+TGG | - | Chr1:96539929-96539948 | None:intergenic | 25.0% |
| ! | TATTTAAATTGACAGAGTTC+AGG | + | Chr1:96540645-96540664 | MsG0180005816.01.T01:three_prime_UTR | 25.0% |
| ! | TCACTAATCATGAGTTAAAA+CGG | - | Chr1:96540153-96540172 | None:intergenic | 25.0% |
| ! | TGTTGAAGATTGAAAGAAAT+CGG | - | Chr1:96538098-96538117 | None:intergenic | 25.0% |
| ! | TTTGTTTATGTTGAGTTCTA+TGG | + | Chr1:96538993-96539012 | MsG0180005816.01.T01:intron | 25.0% |
| !! | CAACAGATGTTTTATATAGA+TGG | + | Chr1:96539933-96539952 | MsG0180005816.01.T01:intron | 25.0% |
| !! | GAGATTGTATTTTCATTCTT+AGG | + | Chr1:96539995-96540014 | MsG0180005816.01.T01:intron | 25.0% |
| !!! | TGAGGTTTTTTCATTTTCTT+GGG | + | Chr1:96540118-96540137 | MsG0180005816.01.T01:three_prime_UTR | 25.0% |
| !!! | TTGAGGTTTTTTCATTTTCT+TGG | + | Chr1:96540117-96540136 | MsG0180005816.01.T01:three_prime_UTR | 25.0% |
| !!! | TTTTTGGTTCAATTGGATTT+TGG | + | Chr1:96540411-96540430 | MsG0180005816.01.T01:three_prime_UTR | 25.0% |
| AAAATTTGCAGTATACACAG+TGG | - | Chr1:96540485-96540504 | None:intergenic | 30.0% | |
| AATTGATGAGAAGATTCATG+TGG | + | Chr1:96539298-96539317 | MsG0180005816.01.T01:CDS | 30.0% | |
| CACATGATATAGCAATTAAC+AGG | + | Chr1:96538923-96538942 | MsG0180005816.01.T01:CDS | 30.0% | |
| CATTAAAGGTAACTGGAAAT+TGG | - | Chr1:96539903-96539922 | None:intergenic | 30.0% | |
| CTAAAATAAGATTCCGTAGA+TGG | - | Chr1:96539551-96539570 | None:intergenic | 30.0% | |
| CTTTCTGTAATGATCATTTC+AGG | + | Chr1:96539224-96539243 | MsG0180005816.01.T01:intron | 30.0% | |
| GTGCATATTTATGTCTACTT+TGG | + | Chr1:96539849-96539868 | MsG0180005816.01.T01:intron | 30.0% | |
| GTGTGTTTATGGGATATAAA+CGG | + | Chr1:96539825-96539844 | MsG0180005816.01.T01:intron | 30.0% | |
| GTTGAAGATTGAAAGAAATC+GGG | - | Chr1:96538097-96538116 | None:intergenic | 30.0% | |
| GTTGCATTTGGTATCATTAA+AGG | - | Chr1:96539917-96539936 | None:intergenic | 30.0% | |
| TACATATGTAGATCAAAGTC+AGG | - | Chr1:96539129-96539148 | None:intergenic | 30.0% | |
| TTGAAGATTGAAAGAAATCG+GGG | - | Chr1:96538096-96538115 | None:intergenic | 30.0% | |
| TTGGTATCATTAAAGGTAAC+TGG | - | Chr1:96539910-96539929 | None:intergenic | 30.0% | |
| TTTCTGATGTACTGCAAATT+TGG | + | Chr1:96538878-96538897 | MsG0180005816.01.T01:CDS | 30.0% | |
| ! | ATGTCTACTTTGGATTTTTC+TGG | + | Chr1:96539859-96539878 | MsG0180005816.01.T01:intron | 30.0% |
| ! | TCATATAAAGCATCTTCCAT+TGG | - | Chr1:96540253-96540272 | None:intergenic | 30.0% |
| ! | TTTTCTTTGCTTGAACGATT+TGG | - | Chr1:96539383-96539402 | None:intergenic | 30.0% |
| !! | TGTTGTGATTCTGTTTCTAT+GGG | + | Chr1:96538375-96538394 | MsG0180005816.01.T01:CDS | 30.0% |
| !! | TTGTATTTGCTGTTATGTGT+TGG | + | Chr1:96540622-96540641 | MsG0180005816.01.T01:three_prime_UTR | 30.0% |
| !! | TTGTTGTGATTCTGTTTCTA+TGG | + | Chr1:96538374-96538393 | MsG0180005816.01.T01:CDS | 30.0% |
| !!! | ACTTTTTCAAATAGGAATGC+TGG | + | Chr1:96540506-96540525 | MsG0180005816.01.T01:three_prime_UTR | 30.0% |
| !!! | ATTGGTTTGCTTTTTTAGGA+TGG | + | Chr1:96540375-96540394 | MsG0180005816.01.T01:three_prime_UTR | 30.0% |
| !!! | GAAATAGATACCCTTGTTTT+AGG | + | Chr1:96540286-96540305 | MsG0180005816.01.T01:three_prime_UTR | 30.0% |
| AAAGATGTCACGTGATAACA+CGG | - | Chr1:96539637-96539656 | None:intergenic | 35.0% | |
| AAGCTGCTAATCTTCTTAAC+AGG | + | Chr1:96538401-96538420 | MsG0180005816.01.T01:CDS | 35.0% | |
| ACAAACTGCTTGTGAATGTA+AGG | - | Chr1:96539493-96539512 | None:intergenic | 35.0% | |
| ACTGCAAATTTGGCTAAATC+AGG | + | Chr1:96538888-96538907 | MsG0180005816.01.T01:CDS | 35.0% | |
| AGAAGATTCATGTGGTACAT+GGG | + | Chr1:96539306-96539325 | MsG0180005816.01.T01:CDS | 35.0% | |
| CCAATTAATCTCGTTTGAGA+GGG | + | Chr1:96538486-96538505 | MsG0180005816.01.T01:intron | 35.0% | |
| GAAATTCTCTCTGTGTAAGT+TGG | + | Chr1:96539194-96539213 | MsG0180005816.01.T01:intron | 35.0% | |
| GAACACACATGTAAAGGAAT+AGG | - | Chr1:96539436-96539455 | None:intergenic | 35.0% | |
| GACACTTGTTTGTATGAACT+TGG | + | Chr1:96539045-96539064 | MsG0180005816.01.T01:intron | 35.0% | |
| TCATACAAGGTAGATATCTG+TGG | + | Chr1:96539593-96539612 | MsG0180005816.01.T01:intron | 35.0% | |
| TCCAATTAATCTCGTTTGAG+AGG | + | Chr1:96538485-96538504 | MsG0180005816.01.T01:intron | 35.0% | |
| TCTGCACACTGAATTTCAAA+TGG | - | Chr1:96540041-96540060 | None:intergenic | 35.0% | |
| TCTTGTACTTGCTTACTGTT+AGG | + | Chr1:96540573-96540592 | MsG0180005816.01.T01:three_prime_UTR | 35.0% | |
| TGAAGATTGAAAGAAATCGG+GGG | - | Chr1:96538095-96538114 | None:intergenic | 35.0% | |
| TGGTTAACTGAAGTCTAGTT+AGG | + | Chr1:96540061-96540080 | MsG0180005816.01.T01:three_prime_UTR | 35.0% | |
| ! | ATCAAAGCTCTTTGTCGATT+TGG | - | Chr1:96540195-96540214 | None:intergenic | 35.0% |
| ! | ATGTGTTGCTATGGAAGAAT+TGG | + | Chr1:96538248-96538267 | MsG0180005816.01.T01:CDS | 35.0% |
| ! | CAAAGAAAAGAAAGTGCAGT+AGG | + | Chr1:96539394-96539413 | MsG0180005816.01.T01:CDS | 35.0% |
| ! | TGATTTTCAGTGTACTCCAA+TGG | + | Chr1:96540234-96540253 | MsG0180005816.01.T01:three_prime_UTR | 35.0% |
| ! | TGCGAATCTTTTGATACTGT+GGG | - | Chr1:96539340-96539359 | None:intergenic | 35.0% |
| ! | TGGATTAGATTACCAGAAGA+GGG | + | Chr1:96540316-96540335 | MsG0180005816.01.T01:three_prime_UTR | 35.0% |
| ! | TTGTATGAACTTGGTGAATC+AGG | + | Chr1:96539054-96539073 | MsG0180005816.01.T01:intron | 35.0% |
| ! | TTTGAAATTCAGTGTGCAGA+TGG | + | Chr1:96540041-96540060 | MsG0180005816.01.T01:intron | 35.0% |
| !!! | CAATTGGATTTTGGTTCAGT+TGG | + | Chr1:96540420-96540439 | MsG0180005816.01.T01:three_prime_UTR | 35.0% |
| !!! | GCACATTGGTTTGCTTTTTT+AGG | + | Chr1:96540371-96540390 | MsG0180005816.01.T01:three_prime_UTR | 35.0% |
| !!! | GCTTTTTTAGGATGGTAGTA+TGG | + | Chr1:96540383-96540402 | MsG0180005816.01.T01:three_prime_UTR | 35.0% |
| AAGTACAAGATAACCTGAGG+TGG | - | Chr1:96540563-96540582 | None:intergenic | 40.0% | |
| AATTCGTTGAGGTTCTACCA+TGG | - | Chr1:96538014-96538033 | None:intergenic | 40.0% | |
| ACTCATGAGAACTTGCACAT+TGG | + | Chr1:96540357-96540376 | MsG0180005816.01.T01:three_prime_UTR | 40.0% | |
| AGCAAGTACAAGATAACCTG+AGG | - | Chr1:96540566-96540585 | None:intergenic | 40.0% | |
| ATTAGATTACCAGAAGAGGG+TGG | + | Chr1:96540319-96540338 | MsG0180005816.01.T01:three_prime_UTR | 40.0% | |
| CACAGTATCAAAAGATTCGC+AGG | + | Chr1:96539339-96539358 | MsG0180005816.01.T01:CDS | 40.0% | |
| CCAGAGTGAACCTAAAACAA+GGG | - | Chr1:96540299-96540318 | None:intergenic | 40.0% | |
| CCCTCTCAAACGAGATTAAT+TGG | - | Chr1:96538489-96538508 | None:intergenic | 40.0% | |
| CGAGATGTTAAACGTAGAGA+AGG | - | Chr1:96537948-96537967 | None:intergenic | 40.0% | |
| GAGAAGATTCATGTGGTACA+TGG | + | Chr1:96539305-96539324 | MsG0180005816.01.T01:CDS | 40.0% | |
| TCACTGCTTACAAGAGGAAA+CGG | - | Chr1:96537857-96537876 | None:intergenic | 40.0% | |
| TCCAGAGTGAACCTAAAACA+AGG | - | Chr1:96540300-96540319 | None:intergenic | 40.0% | |
| TCTTCATCACTGCTTACAAG+AGG | - | Chr1:96537863-96537882 | None:intergenic | 40.0% | |
| TCTTCTCATCAATTCGATCC+TGG | - | Chr1:96539292-96539311 | None:intergenic | 40.0% | |
| TGATGAACGGAAATTCGTTG+AGG | - | Chr1:96538025-96538044 | None:intergenic | 40.0% | |
| TGATTTCTGCAACCACATTG+TGG | + | Chr1:96538290-96538309 | MsG0180005816.01.T01:CDS | 40.0% | |
| TGCTGTTAGAGTTACGGTTA+CGG | - | Chr1:96537923-96537942 | None:intergenic | 40.0% | |
| TTCAAATAGGAATGCTGGTC+TGG | + | Chr1:96540511-96540530 | MsG0180005816.01.T01:three_prime_UTR | 40.0% | |
| TTGCTCATAAACAATGTCCG+TGG | + | Chr1:96539520-96539539 | MsG0180005816.01.T01:intron | 40.0% | |
| ! | AACTTGGTGAATCAGGTTGT+TGG | + | Chr1:96539061-96539080 | MsG0180005816.01.T01:intron | 40.0% |
| ! | ACTTGGTGAATCAGGTTGTT+GGG | + | Chr1:96539062-96539081 | MsG0180005816.01.T01:intron | 40.0% |
| ! | AGCATCGAACACACATGTAA+AGG | - | Chr1:96539442-96539461 | None:intergenic | 40.0% |
| ! | ATTGACAGAGTTCAGGTTTG+TGG | + | Chr1:96540652-96540671 | MsG0180005816.01.T01:three_prime_UTR | 40.0% |
| ! | CGCAACAAATGGAGTATTTG+AGG | + | Chr1:96540100-96540119 | MsG0180005816.01.T01:three_prime_UTR | 40.0% |
| ! | CTGCGAATCTTTTGATACTG+TGG | - | Chr1:96539341-96539360 | None:intergenic | 40.0% |
| ! | CTGGATTAGATTACCAGAAG+AGG | + | Chr1:96540315-96540334 | MsG0180005816.01.T01:three_prime_UTR | 40.0% |
| ! | GAATTTGTTTCTCTGTGCAC+AGG | + | Chr1:96538945-96538964 | MsG0180005816.01.T01:CDS | 40.0% |
| ! | TAGCTTGTGACAAGTCATCA+CGG | + | Chr1:96539723-96539742 | MsG0180005816.01.T01:intron | 40.0% |
| ! | TAGTTGCTGATGTGTTGCTA+TGG | + | Chr1:96538239-96538258 | MsG0180005816.01.T01:intron | 40.0% |
| ! | TCTAGTTAGGAGCATACAGA+TGG | + | Chr1:96540074-96540093 | MsG0180005816.01.T01:three_prime_UTR | 40.0% |
| ! | TGCAGAAAGGGTGTGTTTAT+GGG | + | Chr1:96539815-96539834 | MsG0180005816.01.T01:intron | 40.0% |
| ! | TGGTAGTATGGCATGGTTTT+TGG | + | Chr1:96540395-96540414 | MsG0180005816.01.T01:three_prime_UTR | 40.0% |
| ! | TGTGGTCTAGAACTGTCATA+GGG | + | Chr1:96539611-96539630 | MsG0180005816.01.T01:intron | 40.0% |
| ! | TTGACAGAGTTCAGGTTTGT+GGG | + | Chr1:96540653-96540672 | MsG0180005816.01.T01:three_prime_UTR | 40.0% |
| ! | TTGGCTAAATCAGGCTTTGT+CGG | + | Chr1:96538897-96538916 | MsG0180005816.01.T01:CDS | 40.0% |
| ! | TTTAGGATGGTAGTATGGCA+TGG | + | Chr1:96540388-96540407 | MsG0180005816.01.T01:three_prime_UTR | 40.0% |
| !! | AAGGAGTGCTGTTAGAGTTA+CGG | - | Chr1:96537929-96537948 | None:intergenic | 40.0% |
| !! | GTTACGGTGGCTATTTCTTT+CGG | - | Chr1:96537907-96537926 | None:intergenic | 40.0% |
| !!! | GGCATGGTTTTTGGTTCAAT+TGG | + | Chr1:96540404-96540423 | MsG0180005816.01.T01:three_prime_UTR | 40.0% |
| !!! | GTGGCTATTTCTTTCGGTTT+TGG | - | Chr1:96537901-96537920 | None:intergenic | 40.0% |
| ACACAATATCTCACCACCTC+AGG | + | Chr1:96540547-96540566 | MsG0180005816.01.T01:three_prime_UTR | 45.0% | |
| ACAGATGGATGCGCAACAAA+TGG | + | Chr1:96540089-96540108 | MsG0180005816.01.T01:three_prime_UTR | 45.0% | |
| ATTTCCGTTCATCACGCTCT+CGG | + | Chr1:96538031-96538050 | MsG0180005816.01.T01:CDS | 45.0% | |
| CAGAAGAGGGTGGAAAAGAA+AGG | + | Chr1:96540329-96540348 | MsG0180005816.01.T01:three_prime_UTR | 45.0% | |
| CTCGAACAGATACCACAATG+TGG | - | Chr1:96538305-96538324 | None:intergenic | 45.0% | |
| CTGGTACTTGTCATATGCCA+CGG | - | Chr1:96539273-96539292 | None:intergenic | 45.0% | |
| TCTGCCTGATCTGGAGATTT+CGG | + | Chr1:96538837-96538856 | MsG0180005816.01.T01:CDS | 45.0% | |
| TGGTACTTGTCATATGCCAC+GGG | - | Chr1:96539272-96539291 | None:intergenic | 45.0% | |
| TGTTAGAGTTACGGTTACGG+TGG | - | Chr1:96537920-96537939 | None:intergenic | 45.0% | |
| TTCCGTAGATGGTACATCCA+CGG | - | Chr1:96539540-96539559 | None:intergenic | 45.0% | |
| TTCTCCGAAATCTCCAGATC+AGG | - | Chr1:96538844-96538863 | None:intergenic | 45.0% | |
| TTGCTATGGAAGAATTGGCG+TGG | + | Chr1:96538253-96538272 | MsG0180005816.01.T01:CDS | 45.0% | |
| ! | CTGCAGAAAGGGTGTGTTTA+TGG | + | Chr1:96539814-96539833 | MsG0180005816.01.T01:intron | 45.0% |
| ! | CTGTGGTCTAGAACTGTCAT+AGG | + | Chr1:96539610-96539629 | MsG0180005816.01.T01:intron | 45.0% |
| ! | CTTGGTGAATCAGGTTGTTG+GGG | + | Chr1:96539063-96539082 | MsG0180005816.01.T01:intron | 45.0% |
| ! | CTTTCTTTTCCACCCTCTTC+TGG | - | Chr1:96540331-96540350 | None:intergenic | 45.0% |
| ! | GACAGTCACTAGTTTACCGT+TGG | + | Chr1:96539666-96539685 | MsG0180005816.01.T01:intron | 45.0% |
| !! | CTGTAGAGAGGCATCATACA+AGG | + | Chr1:96539580-96539599 | MsG0180005816.01.T01:intron | 45.0% |
| !! | TAGTTCTGCTTGCTGTAGAG+AGG | + | Chr1:96539568-96539587 | MsG0180005816.01.T01:intron | 45.0% |
| !!! | CCCTTGTTTTAGGTTCACTC+TGG | + | Chr1:96540296-96540315 | MsG0180005816.01.T01:three_prime_UTR | 45.0% |
| AGGTTCTACCATGGCGATTG+GGG | - | Chr1:96538005-96538024 | None:intergenic | 50.0% | |
| CGTGGCATATGACAAGTACC+AGG | + | Chr1:96539271-96539290 | MsG0180005816.01.T01:CDS | 50.0% | |
| CTATGGAAGAATTGGCGTGG+AGG | + | Chr1:96538256-96538275 | MsG0180005816.01.T01:CDS | 50.0% | |
| GAAATCTCCAGATCAGGCAG+AGG | - | Chr1:96538838-96538857 | None:intergenic | 50.0% | |
| GAGGTTCTACCATGGCGATT+GGG | - | Chr1:96538006-96538025 | None:intergenic | 50.0% | |
| GTCCGTGGATGTACCATCTA+CGG | + | Chr1:96539535-96539554 | MsG0180005816.01.T01:intron | 50.0% | |
| TGAGGTTCTACCATGGCGAT+TGG | - | Chr1:96538007-96538026 | None:intergenic | 50.0% | |
| ! | ATGGCGATTGGGGGATTTTG+CGG | - | Chr1:96537995-96538014 | None:intergenic | 50.0% |
| !! | TCTTAGCTTGTCTCTTCCCG+TGG | + | Chr1:96539253-96539272 | MsG0180005816.01.T01:CDS | 50.0% |
| ACTTCCTCCTCTGCCTGATC+TGG | + | Chr1:96538828-96538847 | MsG0180005816.01.T01:CDS | 55.0% | |
| AGAGGCCAAGAGCTGCAGAA+AGG | + | Chr1:96539802-96539821 | MsG0180005816.01.T01:intron | 55.0% | |
| AGATCAGGCAGAGGAGGAAG+TGG | - | Chr1:96538829-96538848 | None:intergenic | 55.0% | |
| ATCTCCAGATCAGGCAGAGG+AGG | - | Chr1:96538835-96538854 | None:intergenic | 55.0% | |
| CACACCCTTTCTGCAGCTCT+TGG | - | Chr1:96539810-96539829 | None:intergenic | 55.0% | |
| GAGGCCAAGAGCTGCAGAAA+GGG | + | Chr1:96539803-96539822 | MsG0180005816.01.T01:intron | 55.0% | |
| GCAAAATCCCCCAATCGCCA+TGG | + | Chr1:96537994-96538013 | MsG0180005816.01.T01:exon | 55.0% | |
| GGTTCTACCATGGCGATTGG+GGG | - | Chr1:96538004-96538023 | None:intergenic | 55.0% | |
| TGGTATCTGTTCGAGCGAGC+CGG | + | Chr1:96538310-96538329 | MsG0180005816.01.T01:CDS | 55.0% | |
| ! | AGAGCCGAGAGCGTGATGAA+CGG | - | Chr1:96538038-96538057 | None:intergenic | 55.0% |
| ATCGGGGGAGAGAGAGAGAG+AGG | - | Chr1:96538080-96538099 | None:intergenic | 60.0% | |
| GTTCATCACGCTCTCGGCTC+TGG | + | Chr1:96538037-96538056 | MsG0180005816.01.T01:CDS | 60.0% | |
| TCGGGGGAGAGAGAGAGAGA+GGG | - | Chr1:96538079-96538098 | None:intergenic | 60.0% | |
| ! | GCGATTGGGGGATTTTGCGG+TGG | - | Chr1:96537992-96538011 | None:intergenic | 60.0% |
| ! | CACGCTCTCGGCTCTGGCTT+AGG | + | Chr1:96538043-96538062 | MsG0180005816.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 96537837 | 96540673 | 96537837 | ID=MsG0180005816.01;Name=MsG0180005816.01 |
| Chr1 | mRNA | 96537837 | 96540673 | 96537837 | ID=MsG0180005816.01.T01;Parent=MsG0180005816.01;Name=MsG0180005816.01.T01;_AED=0.43;_eAED=0.43;_QI=176|1|1|1|0.6|0.66|6|621|204 |
| Chr1 | exon | 96537837 | 96538064 | 96537837 | ID=MsG0180005816.01.T01:exon:10593;Parent=MsG0180005816.01.T01 |
| Chr1 | exon | 96538242 | 96538422 | 96538242 | ID=MsG0180005816.01.T01:exon:10594;Parent=MsG0180005816.01.T01 |
| Chr1 | exon | 96538825 | 96538966 | 96538825 | ID=MsG0180005816.01.T01:exon:10595;Parent=MsG0180005816.01.T01 |
| Chr1 | exon | 96539076 | 96539145 | 96539076 | ID=MsG0180005816.01.T01:exon:10596;Parent=MsG0180005816.01.T01 |
| Chr1 | exon | 96539246 | 96539415 | 96539246 | ID=MsG0180005816.01.T01:exon:10597;Parent=MsG0180005816.01.T01 |
| Chr1 | exon | 96540053 | 96540673 | 96540053 | ID=MsG0180005816.01.T01:exon:10598;Parent=MsG0180005816.01.T01 |
| Chr1 | five_prime_UTR | 96537837 | 96538012 | 96537837 | ID=MsG0180005816.01.T01:five_prime_utr;Parent=MsG0180005816.01.T01 |
| Chr1 | CDS | 96538013 | 96538064 | 96538013 | ID=MsG0180005816.01.T01:cds;Parent=MsG0180005816.01.T01 |
| Chr1 | CDS | 96538242 | 96538422 | 96538242 | ID=MsG0180005816.01.T01:cds;Parent=MsG0180005816.01.T01 |
| Chr1 | CDS | 96538825 | 96538966 | 96538825 | ID=MsG0180005816.01.T01:cds;Parent=MsG0180005816.01.T01 |
| Chr1 | CDS | 96539076 | 96539145 | 96539076 | ID=MsG0180005816.01.T01:cds;Parent=MsG0180005816.01.T01 |
| Chr1 | CDS | 96539246 | 96539415 | 96539246 | ID=MsG0180005816.01.T01:cds;Parent=MsG0180005816.01.T01 |
| Chr1 | three_prime_UTR | 96540053 | 96540673 | 96540053 | ID=MsG0180005816.01.T01:three_prime_utr;Parent=MsG0180005816.01.T01 |
| Gene Sequence |
| Protein sequence |
