AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040121.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040121.01.T02 MTR_7g084800 99.752 404 1 0 1 404 1 404 0.0 818
MsG0780040121.01.T02 MTR_3g115920 74.742 388 90 5 21 403 38 422 0.0 527
MsG0780040121.01.T02 MTR_3g115920 74.531 373 87 5 21 388 38 407 3.04e-178 503
MsG0780040121.01.T02 MTR_3g115920 80.139 287 54 3 120 403 2 288 1.41e-143 411
MsG0780040121.01.T02 MTR_2g065470 49.544 329 161 4 69 395 23 348 1.72e-103 311
MsG0780040121.01.T02 MTR_2g065470 49.544 329 161 4 69 395 82 407 4.80e-103 311
MsG0780040121.01.T02 MTR_2g065470 49.068 322 159 4 69 388 82 400 1.83e-99 302
MsG0780040121.01.T02 MTR_3g085850 46.988 332 170 5 67 395 4 332 3.41e-98 296
MsG0780040121.01.T02 MTR_4g103920 47.130 331 169 5 68 395 4 331 2.07e-95 289
MsG0780040121.01.T02 MTR_6g022630 45.820 323 169 5 69 388 3 322 6.43e-91 277
MsG0780040121.01.T02 MTR_3g085850 48.084 287 146 3 111 395 2 287 9.53e-90 273
MsG0780040121.01.T02 MTR_4g103920 48.315 267 132 5 68 331 4 267 7.05e-76 237
MsG0780040121.01.T02 MTR_8g046560 42.188 256 124 5 150 388 10 258 1.53e-53 186
MsG0780040121.01.T02 MTR_1680s0010 54.545 132 60 0 244 375 1 132 2.11e-36 137
MsG0780040121.01.T02 MTR_8g464820 43.836 146 72 3 244 388 1 137 6.31e-26 108
MsG0780040121.01.T02 MTR_0776s0010 47.107 121 62 2 70 189 1789 1908 2.52e-23 103
MsG0780040121.01.T02 MTR_7g056277 74.468 47 11 1 166 211 132 178 5.95e-13 70.9
MsG0780040121.01.T01 MTR_7g084800 99.752 404 1 0 1 404 1 404 0.0 818
MsG0780040121.01.T01 MTR_3g115920 74.742 388 90 5 21 403 38 422 0.0 527
MsG0780040121.01.T01 MTR_3g115920 74.531 373 87 5 21 388 38 407 3.04e-178 503
MsG0780040121.01.T01 MTR_3g115920 80.139 287 54 3 120 403 2 288 1.41e-143 411
MsG0780040121.01.T01 MTR_2g065470 49.544 329 161 4 69 395 23 348 1.72e-103 311
MsG0780040121.01.T01 MTR_2g065470 49.544 329 161 4 69 395 82 407 4.80e-103 311
MsG0780040121.01.T01 MTR_2g065470 49.068 322 159 4 69 388 82 400 1.83e-99 302
MsG0780040121.01.T01 MTR_3g085850 46.988 332 170 5 67 395 4 332 3.41e-98 296
MsG0780040121.01.T01 MTR_4g103920 47.130 331 169 5 68 395 4 331 2.07e-95 289
MsG0780040121.01.T01 MTR_6g022630 45.820 323 169 5 69 388 3 322 6.43e-91 277
MsG0780040121.01.T01 MTR_3g085850 48.084 287 146 3 111 395 2 287 9.53e-90 273
MsG0780040121.01.T01 MTR_4g103920 48.315 267 132 5 68 331 4 267 7.05e-76 237
MsG0780040121.01.T01 MTR_8g046560 42.188 256 124 5 150 388 10 258 1.53e-53 186
MsG0780040121.01.T01 MTR_1680s0010 54.545 132 60 0 244 375 1 132 2.11e-36 137
MsG0780040121.01.T01 MTR_8g464820 43.836 146 72 3 244 388 1 137 6.31e-26 108
MsG0780040121.01.T01 MTR_0776s0010 47.107 121 62 2 70 189 1789 1908 2.52e-23 103
MsG0780040121.01.T01 MTR_7g056277 74.468 47 11 1 166 211 132 178 5.95e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040121.01.T02 AT1G12900 87.654 405 43 4 1 404 43 441 0.0 669
MsG0780040121.01.T02 AT1G12900 87.654 405 43 4 1 404 1 399 0.0 667
MsG0780040121.01.T02 AT3G26650 86.173 405 46 3 1 404 1 396 0.0 657
MsG0780040121.01.T02 AT1G12900 91.404 349 29 1 56 404 3 350 0.0 605
MsG0780040121.01.T02 AT1G12900 91.404 349 29 1 56 404 3 350 0.0 605
MsG0780040121.01.T02 AT1G42970 73.711 388 89 7 21 403 39 418 0.0 531
MsG0780040121.01.T02 AT1G12900 93.952 248 15 0 157 404 70 317 1.27e-152 434
MsG0780040121.01.T02 AT1G79530 47.904 334 169 4 69 400 86 416 5.43e-100 304
MsG0780040121.01.T02 AT1G16300 44.241 382 199 6 21 400 45 414 3.32e-99 302
MsG0780040121.01.T02 AT1G13440 47.006 334 171 5 65 395 1 331 1.75e-98 297
MsG0780040121.01.T02 AT3G04120 46.108 334 174 5 65 395 1 331 8.04e-97 293
MsG0780040121.01.T02 AT1G13440 41.916 334 160 6 65 395 1 303 1.31e-79 248
MsG0780040121.01.T01 AT1G12900 87.654 405 43 4 1 404 43 441 0.0 669
MsG0780040121.01.T01 AT1G12900 87.654 405 43 4 1 404 1 399 0.0 667
MsG0780040121.01.T01 AT3G26650 86.173 405 46 3 1 404 1 396 0.0 657
MsG0780040121.01.T01 AT1G12900 91.404 349 29 1 56 404 3 350 0.0 605
MsG0780040121.01.T01 AT1G12900 91.404 349 29 1 56 404 3 350 0.0 605
MsG0780040121.01.T01 AT1G42970 73.711 388 89 7 21 403 39 418 0.0 531
MsG0780040121.01.T01 AT1G12900 93.952 248 15 0 157 404 70 317 1.27e-152 434
MsG0780040121.01.T01 AT1G79530 47.904 334 169 4 69 400 86 416 5.43e-100 304
MsG0780040121.01.T01 AT1G16300 44.241 382 199 6 21 400 45 414 3.32e-99 302
MsG0780040121.01.T01 AT1G13440 47.006 334 171 5 65 395 1 331 1.75e-98 297
MsG0780040121.01.T01 AT3G04120 46.108 334 174 5 65 395 1 331 8.04e-97 293
MsG0780040121.01.T01 AT1G13440 41.916 334 160 6 65 395 1 303 1.31e-79 248

Find 66 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAATTAGCAAATATTATT+TGG 0.131413 7:+73257933 None:intergenic
TGGCTCTCACTTCCAGTTAT+TGG 0.185348 7:+73257953 None:intergenic
CTCACAAAGGGTTGTTGATT+TGG 0.245442 7:-73257988 MsG0780040121.01.T01:CDS
CTCCAATCCACATATAGATT+TGG 0.274370 7:+73257748 None:intergenic
TCCAATCCACATATAGATTT+GGG 0.279416 7:+73257749 None:intergenic
CTCCTAAGGTTAATCATTCA+TGG 0.297055 7:-73257704 MsG0780040121.01.T01:intron
CTGACATTGTTGCCAATAAC+TGG 0.306527 7:-73257965 MsG0780040121.01.T01:CDS
CTTGTCCTCCCATCACTTAA+AGG 0.338998 7:-73258293 MsG0780040121.01.T01:CDS
AGTCTCACATTTATATTTCA+AGG 0.340032 7:+73257777 None:intergenic
GGCCACTGCCTTTGCTGCTC+CGG 0.348204 7:+73258316 None:intergenic
CTATTTCTCAATACAAGTTT+CGG 0.355673 7:+73257846 None:intergenic
ATGCTAGCCACCGTGATCTA+AGG 0.366376 7:-73258379 MsG0780040121.01.T01:CDS
AACATTGTGCCAACTTCAAC+CGG 0.389585 7:-73258335 MsG0780040121.01.T01:CDS
TTAATAGTGTGTTTCTCCTA+AGG 0.442784 7:-73257718 MsG0780040121.01.T01:intron
TGCTTGGTATGATAATGAAT+GGG 0.460745 7:-73258015 MsG0780040121.01.T01:CDS
GAGGAGCAAGAGAAAATTGA+TGG 0.467939 7:+73257821 None:intergenic
AAGCCTTTGGTCACCGGTGT+AGG 0.479065 7:+73258406 None:intergenic
GGCTAGCATCAAGAAGCCTT+TGG 0.481799 7:+73258393 None:intergenic
AGGTCAACAACCGAGACGTT+TGG 0.488985 7:+73258236 None:intergenic
TTTGCTGCTCCGGTTGAAGT+TGG 0.491416 7:+73258326 None:intergenic
TTGAGCTTGCCTTTAAGTGA+TGG 0.493574 7:+73258284 None:intergenic
TGAGCTTGCCTTTAAGTGAT+GGG 0.495886 7:+73258285 None:intergenic
TTTCAGAGACAGTGCAGCCA+AGG 0.512789 7:-73258165 MsG0780040121.01.T01:CDS
TTCGTCATTGACAATGGTCA+TGG 0.513254 7:-73258060 MsG0780040121.01.T01:CDS
ATCAAGAAGCCTTTGGTCAC+CGG 0.515096 7:+73258400 None:intergenic
CCCCAAATCTATATGTGGAT+TGG 0.516350 7:-73257750 MsG0780040121.01.T01:intron
GAGAATACCGCTCAGCTCCT+TGG 0.524534 7:+73258148 None:intergenic
AACCATGAATGATTAACCTT+AGG 0.528998 7:+73257702 None:intergenic
CTTTAAGTGATGGGAGGACA+AGG 0.529210 7:+73258294 None:intergenic
AACTTCAACCGGAGCAGCAA+AGG 0.533569 7:-73258324 MsG0780040121.01.T01:CDS
TTGCTTGGTATGATAATGAA+TGG 0.536174 7:-73258016 MsG0780040121.01.T01:CDS
AACCGGAGCAGCAAAGGCAG+TGG 0.541553 7:-73258318 MsG0780040121.01.T01:CDS
TGAATGGGGTTACTCACAAA+GGG 0.544864 7:-73258000 MsG0780040121.01.T01:CDS
CTCTTGCACGCCTTAGATCA+CGG 0.552003 7:+73258369 None:intergenic
ATTTGCTGAAGAAGTGAATG+AGG 0.560532 7:-73258189 MsG0780040121.01.T01:CDS
GGAATTGACGAAAATACCCC+TGG 0.578837 7:+73256130 None:intergenic
CGTTGATTCGTCATTGACAA+TGG 0.579256 7:-73258066 MsG0780040121.01.T01:CDS
ATGAATGGGGTTACTCACAA+AGG 0.581529 7:-73258001 MsG0780040121.01.T01:CDS
TTGGATCACAGGTATCATCA+AGG 0.582878 7:-73258450 MsG0780040121.01.T01:intron
AAAGAATTTATTGCACAATG+AGG 0.586511 7:+73257802 None:intergenic
CAATGACGAATCAACGGTTG+AGG 0.591375 7:+73258073 None:intergenic
ACATGGTGAAGGTGATTGCT+TGG 0.591983 7:-73258031 MsG0780040121.01.T01:CDS
ACTACCACTCACTCCTACAC+CGG 0.595936 7:-73258419 MsG0780040121.01.T01:CDS
ACAACCGAGACGTTTGGTGT+TGG 0.599911 7:+73258242 None:intergenic
TCGTCATTGACAATGGTCAT+GGG 0.600931 7:-73258059 MsG0780040121.01.T01:CDS
ACTCCTACACCGGTGACCAA+AGG 0.601118 7:-73258409 MsG0780040121.01.T01:CDS
GTCACCGGTGTAGGAGTGAG+TGG 0.617969 7:+73258415 None:intergenic
TGTGCCAACACCAAACGTCT+CGG 0.622747 7:-73258246 MsG0780040121.01.T01:CDS
TCACTTAAAGGCAAGCTCAA+CGG 0.626795 7:-73258281 MsG0780040121.01.T01:CDS
CATTGTCAATGACGAATCAA+CGG 0.634207 7:+73258067 None:intergenic
CAATCCACATATAGATTTGG+GGG 0.635755 7:+73257751 None:intergenic
CCAATCCACATATAGATTTG+GGG 0.636689 7:+73257750 None:intergenic
TGAAATATAAATGTGAGACT+AGG 0.640249 7:-73257774 MsG0780040121.01.T01:intron
TGGATCACAGGTATCATCAA+GGG 0.643217 7:-73258449 MsG0780040121.01.T01:intron
CTAAAATCTACAGACACAAG+TGG 0.644572 7:+73258110 None:intergenic
GCTTGGTATGATAATGAATG+GGG 0.645070 7:-73258014 MsG0780040121.01.T01:CDS
GCTTGCCTTTAAGTGATGGG+AGG 0.645422 7:+73258288 None:intergenic
GTAGGAGTGAGTGGTAGTCA+TGG 0.651863 7:+73258424 None:intergenic
AATGGTCATGGGAGATGACA+TGG 0.657489 7:-73258048 MsG0780040121.01.T01:CDS
TACAAAATTACAATGGCACA+TGG 0.664845 7:+73257898 None:intergenic
AGAAGTGTACAAAATTACAA+TGG 0.669736 7:+73257891 None:intergenic
CATGGGAGATGACATGGTGA+AGG 0.682296 7:-73258042 MsG0780040121.01.T01:CDS
TTTAAGTGATGGGAGGACAA+GGG 0.684817 7:+73258295 None:intergenic
AGTGCAGCCAAGGAGCTGAG+CGG 0.723974 7:-73258155 MsG0780040121.01.T01:CDS
TTGCACGCCTTAGATCACGG+TGG 0.804209 7:+73258372 None:intergenic
TCTTTGAGACTTGAACAACG+AGG 0.832544 7:+73258216 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATTAGCAAATATTATT+TGG + Chr7:73259401-73259420 None:intergenic 10.0%
!!! AATTAAAACTGAAAATTTTT+TGG - Chr7:73261104-73261123 MsG0780040121.01.T01:five_prime_UTR 10.0%
!!! ATTAAAACTGAAAATTTTTT+GGG - Chr7:73261105-73261124 MsG0780040121.01.T01:five_prime_UTR 10.0%
!!! TTAAAAAAAACGATATTTTT+TGG + Chr7:73257024-73257043 None:intergenic 10.0%
!! AAAAAATCGTAAAAAAAATC+CGG - Chr7:73261128-73261147 MsG0780040121.01.T01:five_prime_UTR 15.0%
!! GATTATATTAACCATTTAAA+TGG - Chr7:73258088-73258107 MsG0780040121.01.T01:CDS 15.0%
!! TAAAATATCAAACTTGAATA+TGG - Chr7:73257050-73257069 MsG0780040121.01.T01:intron 15.0%
!! TAAAATTATAAGTCATTCAT+TGG + Chr7:73256686-73256705 None:intergenic 15.0%
!! TTAATAACAAAAAAAGGAAA+AGG - Chr7:73260777-73260796 MsG0780040121.01.T01:CDS 15.0%
!! TTTGGATAAACAATTTAATT+AGG - Chr7:73257757-73257776 MsG0780040121.01.T01:intron 15.0%
!!! AAACTGAAAATTTTTTTTGA+AGG - Chr7:73261155-73261174 MsG0780040121.01.T01:five_prime_UTR 15.0%
!!! AATTCTTTGGTTTATTATAT+AGG - Chr7:73256530-73256549 MsG0780040121.01.T01:intron 15.0%
!!! GAAGAAAAAAAAATTTTTGA+AGG + Chr7:73261000-73261019 None:intergenic 15.0%
!!! GATTGTATTTTATTTTGTTA+GGG - Chr7:73260357-73260376 MsG0780040121.01.T01:intron 15.0%
!!! TAGCTTATAACTTATTATTT+TGG + Chr7:73260432-73260451 None:intergenic 15.0%
!!! TTGTATTTTATTTTGTTAGA+AGG + Chr7:73260102-73260121 None:intergenic 15.0%
!!! TTTTGTAACTAACTAAAATT+AGG - Chr7:73257672-73257691 MsG0780040121.01.T01:intron 15.0%
!!! TTTTTGCTTATAATAAAAAC+TGG - Chr7:73258636-73258655 MsG0780040121.01.T01:intron 15.0%
!! AAAAAAAAAAATTACACACG+TGG - Chr7:73260233-73260252 MsG0780040121.01.T01:intron 20.0%
!! AAAAATCGTAAAAAAAATCC+GGG - Chr7:73261129-73261148 MsG0780040121.01.T01:five_prime_UTR 20.0%
!! AAACAAAAAAAAAAAAAGCC+AGG - Chr7:73261183-73261202 MsG0780040121.01.T01:five_prime_UTR 20.0%
!! AACAAAAAAAAAAAAAGCCA+GGG - Chr7:73261184-73261203 MsG0780040121.01.T01:five_prime_UTR 20.0%
!! AATAAATTATCACTTCAGAA+AGG - Chr7:73260723-73260742 MsG0780040121.01.T01:CDS 20.0%
!! ATTTAATTAGGCACTTATAA+CGG - Chr7:73257769-73257788 MsG0780040121.01.T01:intron 20.0%
!! GATAGATATTCAATTCTATT+TGG - Chr7:73257739-73257758 MsG0780040121.01.T01:intron 20.0%
!! GGTTTATTATATAGGTAAAT+GGG - Chr7:73256538-73256557 MsG0780040121.01.T01:intron 20.0%
!! TAAACTCATATATTAACTAG+TGG - Chr7:73256425-73256444 MsG0780040121.01.T01:intron 20.0%
!! TATGTATAAACTTAATGTTG+TGG + Chr7:73258778-73258797 None:intergenic 20.0%
!! TGGTTTATTATATAGGTAAA+TGG - Chr7:73256537-73256556 MsG0780040121.01.T01:intron 20.0%
!! TTTCTAACATATTAAGACAT+TGG - Chr7:73258862-73258881 MsG0780040121.01.T01:CDS 20.0%
!!! AAAAATTTTCAGTTTTTTCC+CGG + Chr7:73261150-73261169 None:intergenic 20.0%
!!! AGTCTTTTAGATTCATATAT+TGG - Chr7:73256895-73256914 MsG0780040121.01.T01:intron 20.0%
!!! GAAGTGATAATTTATTTTGT+TGG + Chr7:73260719-73260738 None:intergenic 20.0%
!!! GCATATTTTTATTTTAGAGT+AGG - Chr7:73257986-73258005 MsG0780040121.01.T01:CDS 20.0%
!!! GGATTGTATTTTATTTTGTT+AGG - Chr7:73260356-73260375 MsG0780040121.01.T01:intron 20.0%
!!! TAATTTGTTTAATCAGTTCA+TGG + Chr7:73257181-73257200 None:intergenic 20.0%
!!! TATAACTTCTAAGTTCTAAA+AGG + Chr7:73259900-73259919 None:intergenic 20.0%
! AAAATCGCAACTTATACTTA+AGG + Chr7:73260077-73260096 None:intergenic 25.0%
! AAAATTAAGGTAGCCATAAA+CGG - Chr7:73257305-73257324 MsG0780040121.01.T01:intron 25.0%
! AAAGAATTTATTGCACAATG+AGG + Chr7:73259532-73259551 None:intergenic 25.0%
! AAATCGCAACTTATACTTAA+GGG + Chr7:73260076-73260095 None:intergenic 25.0%
! AAGGAAAAAAAATTAGCACA+GGG + Chr7:73260981-73261000 None:intergenic 25.0%
! AATATTGCAGTAATATGTCA+TGG + Chr7:73259777-73259796 None:intergenic 25.0%
! ACAAAAAAAAAAAAAGCCAG+GGG - Chr7:73261185-73261204 MsG0780040121.01.T01:five_prime_UTR 25.0%
! ACAATATTAATGTATGCCTA+AGG + Chr7:73258256-73258275 None:intergenic 25.0%
! AGTCTCACATTTATATTTCA+AGG + Chr7:73259557-73259576 None:intergenic 25.0%
! ATAACTGAGATCCATTTAAA+TGG + Chr7:73258102-73258121 None:intergenic 25.0%
! ATTATATAGGTAAATGGGAA+AGG - Chr7:73256543-73256562 MsG0780040121.01.T01:intron 25.0%
! GACTCATTCTATAAGTAAAA+TGG + Chr7:73256879-73256898 None:intergenic 25.0%
! GATTGGAGGAAAAAAATAAT+AGG - Chr7:73260032-73260051 MsG0780040121.01.T01:CDS 25.0%
! GCATACAGAAAAATATTTGT+CGG - Chr7:73258066-73258085 MsG0780040121.01.T01:CDS 25.0%
! TAAAAAATCCATGTTAGACT+TGG + Chr7:73256770-73256789 None:intergenic 25.0%
! TATAAAGTGTAGTAAGATGT+GGG + Chr7:73256239-73256258 None:intergenic 25.0%
! TATCAGATAAGTTAGTTGAT+TGG - Chr7:73260015-73260034 MsG0780040121.01.T01:CDS 25.0%
! TATCATATCACATTAGTGTT+AGG - Chr7:73256933-73256952 MsG0780040121.01.T01:intron 25.0%
! TGAAATATAAATGTGAGACT+AGG - Chr7:73259557-73259576 MsG0780040121.01.T01:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG + Chr7:73260881-73260900 None:intergenic 25.0%
! TTTAACTGATTAAACTTTGC+AGG + Chr7:73260882-73260901 None:intergenic 25.0%
!! AGAAGTGTACAAAATTACAA+TGG + Chr7:73259443-73259462 None:intergenic 25.0%
!! CACGTATTTGTTAGAAAATA+TGG + Chr7:73258612-73258631 None:intergenic 25.0%
!! CTATTTCTCAATACAAGTTT+CGG + Chr7:73259488-73259507 None:intergenic 25.0%
!! GACAAATATTTTTCTGTATG+CGG + Chr7:73258067-73258086 None:intergenic 25.0%
!! TAGCATTTTCATTCAATGAA+TGG + Chr7:73256159-73256178 None:intergenic 25.0%
!! TTAAGTATAAGTTGCGATTT+TGG - Chr7:73260076-73260095 MsG0780040121.01.T01:intron 25.0%
!!! ACATTTTGATCTTGATTGAA+CGG + Chr7:73257001-73257020 None:intergenic 25.0%
!!! ATCTGAAGTTTTTCTAGAAA+AGG + Chr7:73256613-73256632 None:intergenic 25.0%
!!! ATTCATTGATTTTGTTGCAA+TGG - Chr7:73257583-73257602 MsG0780040121.01.T01:intron 25.0%
!!! TCTGAAGTTTTTCTAGAAAA+GGG + Chr7:73256612-73256631 None:intergenic 25.0%
!!! TTGTTTTGTTTTTTCCCTAT+TGG - Chr7:73259868-73259887 MsG0780040121.01.T01:CDS 25.0%
AAAAAAAATTACACACGTGG+CGG - Chr7:73260236-73260255 MsG0780040121.01.T01:intron 30.0%
AAAACAAAACAATCTGCAAC+TGG + Chr7:73259860-73259879 None:intergenic 30.0%
AAATCTAATCCTTACTTGGT+TGG - Chr7:73256183-73256202 MsG0780040121.01.T01:intron 30.0%
AACCATGAATGATTAACCTT+AGG + Chr7:73259632-73259651 None:intergenic 30.0%
AATCGCAACTTATACTTAAG+GGG + Chr7:73260075-73260094 None:intergenic 30.0%
AATCTAATCCTTACTTGGTT+GGG - Chr7:73256184-73256203 MsG0780040121.01.T01:intron 30.0%
AGGAAAAAAAATTAGCACAG+GGG + Chr7:73260980-73260999 None:intergenic 30.0%
ATAATCAACCAAGTCTAACA+TGG - Chr7:73256759-73256778 MsG0780040121.01.T01:intron 30.0%
ATAGAAATTGTCTATCGTCA+TGG - Chr7:73257704-73257723 MsG0780040121.01.T01:intron 30.0%
ATATTAAGACATTGGATCAC+AGG - Chr7:73258870-73258889 MsG0780040121.01.T01:CDS 30.0%
ATGTTGTAGCAATAAAGCTA+GGG - Chr7:73256452-73256471 MsG0780040121.01.T01:intron 30.0%
ATGTTTGTACATTTGAAGGT+TGG - Chr7:73257242-73257261 MsG0780040121.01.T01:intron 30.0%
CAAAATTACCATAATGGCAT+GGG - Chr7:73260940-73260959 MsG0780040121.01.T01:intron 30.0%
CGTCATCAAAATTACCATAA+TGG - Chr7:73260934-73260953 MsG0780040121.01.T01:intron 30.0%
CTAAAAGGAACAATCCAATA+GGG + Chr7:73259885-73259904 None:intergenic 30.0%
CTACATGTTTGTACATTTGA+AGG - Chr7:73257238-73257257 MsG0780040121.01.T01:intron 30.0%
CTATAAAGTGTAGTAAGATG+TGG + Chr7:73256240-73256259 None:intergenic 30.0%
GAAGGAAAAAAAATTAGCAC+AGG + Chr7:73260982-73261001 None:intergenic 30.0%
GAGATAAAAACTTACTGCAT+TGG + Chr7:73256664-73256683 None:intergenic 30.0%
GCAACAAAATCAATGAATGA+AGG + Chr7:73257581-73257600 None:intergenic 30.0%
TAACTGATTAAACTTTGCAG+GGG + Chr7:73260880-73260899 None:intergenic 30.0%
TACAAAATTACAATGGCACA+TGG + Chr7:73259436-73259455 None:intergenic 30.0%
TACAATTTCTTCTTCCTTGT+AGG - Chr7:73256318-73256337 MsG0780040121.01.T01:intron 30.0%
TATGTCAAAAATGATTCGCT+TGG + Chr7:73260527-73260546 None:intergenic 30.0%
TCAAAATTACCATAATGGCA+TGG - Chr7:73260939-73260958 MsG0780040121.01.T01:intron 30.0%
TCCAAAATCTAATCCTTACT+TGG - Chr7:73256179-73256198 MsG0780040121.01.T01:intron 30.0%
TCCAATCCACATATAGATTT+GGG + Chr7:73259585-73259604 None:intergenic 30.0%
TCTAAAAGGAACAATCCAAT+AGG + Chr7:73259886-73259905 None:intergenic 30.0%
TGATTACAGCAACTAAAACA+AGG + Chr7:73260589-73260608 None:intergenic 30.0%
TGTTAGAAAATATGGCGATA+AGG + Chr7:73258604-73258623 None:intergenic 30.0%
TTAATAGTGTGTTTCTCCTA+AGG - Chr7:73259613-73259632 MsG0780040121.01.T01:intron 30.0%
TTAGTTGAGAAGTAGACTAA+TGG + Chr7:73259719-73259738 None:intergenic 30.0%
! AACCATCAAGTGTGTATTTT+TGG + Chr7:73257157-73257176 None:intergenic 30.0%
! AAGATTGTTATTGCTATTGC+AGG - Chr7:73258326-73258345 MsG0780040121.01.T01:CDS 30.0%
! ACCAAGTAAGGATTAGATTT+TGG + Chr7:73256183-73256202 None:intergenic 30.0%
! ACCATCAAGTGTGTATTTTT+GGG + Chr7:73257156-73257175 None:intergenic 30.0%
! AGATTGTTATTGCTATTGCA+GGG - Chr7:73258327-73258346 MsG0780040121.01.T01:CDS 30.0%
! TGCACTTATAAGTTGAAAAC+CGG - Chr7:73260547-73260566 MsG0780040121.01.T01:intron 30.0%
! TGCTTGGTATGATAATGAAT+GGG - Chr7:73259316-73259335 MsG0780040121.01.T01:intron 30.0%
! TGTAGTGGAAGCAAAAATTA+AGG - Chr7:73257292-73257311 MsG0780040121.01.T01:intron 30.0%
! TTGCTTGGTATGATAATGAA+TGG - Chr7:73259315-73259334 MsG0780040121.01.T01:intron 30.0%
!! AAAAACTTACTGCATTGGTT+TGG + Chr7:73256659-73256678 None:intergenic 30.0%
!!! GTTTTAGTTGCTGTAATCAA+CGG - Chr7:73260590-73260609 MsG0780040121.01.T01:intron 30.0%
!!! TTATGGTAATTTTGATGACG+TGG + Chr7:73260934-73260953 None:intergenic 30.0%
!!! TTTTGGCTTAATAGCAGTTT+TGG + Chr7:73260415-73260434 None:intergenic 30.0%
AAAATATCAACTCGAGACGT+AGG - Chr7:73256972-73256991 MsG0780040121.01.T01:intron 35.0%
AAGGTCCTTGATCAGAAATT+CGG - Chr7:73258571-73258590 MsG0780040121.01.T01:intron 35.0%
AATCCTTCCAAATCCGTTTA+TGG + Chr7:73257321-73257340 None:intergenic 35.0%
ATATGTTGAACCTTAAGAGC+TGG + Chr7:73256381-73256400 None:intergenic 35.0%
CAATCCACATATAGATTTGG+GGG + Chr7:73259583-73259602 None:intergenic 35.0%
CAGATAAGTTAGTTGATTGG+AGG - Chr7:73260018-73260037 MsG0780040121.01.T01:CDS 35.0%
CATGTTGTAGCAATAAAGCT+AGG - Chr7:73256451-73256470 MsG0780040121.01.T01:intron 35.0%
CATTACCGAATTTCTGATCA+AGG + Chr7:73258579-73258598 None:intergenic 35.0%
CATTATAGAGTGATCGACAA+AGG - Chr7:73259953-73259972 MsG0780040121.01.T01:CDS 35.0%
CATTGTCAATGACGAATCAA+CGG + Chr7:73259267-73259286 None:intergenic 35.0%
CCAATCCACATATAGATTTG+GGG + Chr7:73259584-73259603 None:intergenic 35.0%
CTAAAATCTACAGACACAAG+TGG + Chr7:73259224-73259243 None:intergenic 35.0%
CTCAAGTATGATTCTACACT+TGG - Chr7:73257440-73257459 MsG0780040121.01.T01:intron 35.0%
CTCCAATCCACATATAGATT+TGG + Chr7:73259586-73259605 None:intergenic 35.0%
CTCCTAAGGTTAATCATTCA+TGG - Chr7:73259627-73259646 MsG0780040121.01.T01:intron 35.0%
CTTTGTCGATCACTCTATAA+TGG + Chr7:73259955-73259974 None:intergenic 35.0%
GAAAACCGGACATTATCAAT+TGG - Chr7:73260561-73260580 MsG0780040121.01.T01:intron 35.0%
GAAGATATCCTGATGAGTTA+CGG + Chr7:73256590-73256609 None:intergenic 35.0%
GGTACTTATAAGGTTGGATT+GGG - Chr7:73260317-73260336 MsG0780040121.01.T01:intron 35.0%
GTGTAGAATCATACTTGAGA+AGG + Chr7:73257439-73257458 None:intergenic 35.0%
TATAATTCCTCTTGAGCATG+AGG - Chr7:73259677-73259696 MsG0780040121.01.T01:intron 35.0%
TATGTTGAACCTTAAGAGCT+GGG + Chr7:73256380-73256399 None:intergenic 35.0%
TCCCAAAAATACACACTTGA+TGG - Chr7:73257152-73257171 MsG0780040121.01.T01:intron 35.0%
TGCACACTTAATGACTTCTA+TGG - Chr7:73256792-73256811 MsG0780040121.01.T01:intron 35.0%
TGCTGCTACAATCTGTAAAA+GGG - Chr7:73260688-73260707 MsG0780040121.01.T01:CDS 35.0%
TTGCTGCTACAATCTGTAAA+AGG - Chr7:73260687-73260706 MsG0780040121.01.T01:CDS 35.0%
TTGGTCAAAATTGATCTGGA+AGG - Chr7:73260275-73260294 MsG0780040121.01.T01:intron 35.0%
TTTGTTGCAATGGAATTGTG+TGG - Chr7:73257593-73257612 MsG0780040121.01.T01:intron 35.0%
! AAAAAAGGATTAGCGATTGC+AGG + Chr7:73260853-73260872 None:intergenic 35.0%
! ATAAACGGATTTGGAAGGAT+TGG - Chr7:73257320-73257339 MsG0780040121.01.T01:intron 35.0%
! ATTTGCTGAAGAAGTGAATG+AGG - Chr7:73259142-73259161 MsG0780040121.01.T01:intron 35.0%
! CACTTGTGTCTGTAGATTTT+AGG - Chr7:73259222-73259241 MsG0780040121.01.T01:intron 35.0%
! GCTTGGTATGATAATGAATG+GGG - Chr7:73259317-73259336 MsG0780040121.01.T01:intron 35.0%
! TGGTGTCAAAAACTGCAAAA+CGG + Chr7:73260145-73260164 None:intergenic 35.0%
!! CTAGCTTTATTGCTACAACA+TGG + Chr7:73256453-73256472 None:intergenic 35.0%
!! GGAATAGATTTGGTGATTGA+AGG - Chr7:73258355-73258374 MsG0780040121.01.T01:CDS 35.0%
!! TGACTTGGTCAAAATTGATC+TGG - Chr7:73260271-73260290 MsG0780040121.01.T01:intron 35.0%
!! TGACTTGGTCAAAATTGATC+TGG + Chr7:73260290-73260271 None:intergenic 35.0%
!!! AAGTGTGTATTTTTGGGATC+CGG + Chr7:73257150-73257169 None:intergenic 35.0%
AACATTGTGCCAACTTCAAC+CGG - Chr7:73258996-73259015 MsG0780040121.01.T01:intron 40.0%
AACTTCTTGAGATGTTGGCA+TGG - Chr7:73257347-73257366 MsG0780040121.01.T01:intron 40.0%
AAGCCATGATTAAGCCTACA+AGG + Chr7:73256335-73256354 None:intergenic 40.0%
ACTGATGGTATCTCTGTTGA+TGG - Chr7:73257494-73257513 MsG0780040121.01.T01:intron 40.0%
ATCATACTTGAGAAGGTGAG+AGG + Chr7:73257432-73257451 None:intergenic 40.0%
ATGAATGGGGTTACTCACAA+AGG - Chr7:73259330-73259349 MsG0780040121.01.T01:intron 40.0%
CAAAAAGGGCGGTACTTATA+AGG - Chr7:73260307-73260326 MsG0780040121.01.T01:intron 40.0%
CCCCAAATCTATATGTGGAT+TGG - Chr7:73259581-73259600 MsG0780040121.01.T01:intron 40.0%
CGGTACTTATAAGGTTGGAT+TGG - Chr7:73260316-73260335 MsG0780040121.01.T01:intron 40.0%
CTGACATTGTTGCCAATAAC+TGG - Chr7:73259366-73259385 MsG0780040121.01.T01:intron 40.0%
CTTCCTTGTAGGCTTAATCA+TGG - Chr7:73256329-73256348 MsG0780040121.01.T01:intron 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG + Chr7:73260868-73260887 None:intergenic 40.0%
GAAGGAACTTCTTGAGATGT+TGG - Chr7:73257342-73257361 MsG0780040121.01.T01:intron 40.0%
GAAGGCCAAAACTGCAAAAA+GGG - Chr7:73260293-73260312 MsG0780040121.01.T01:intron 40.0%
GAGGAGCAAGAGAAAATTGA+TGG + Chr7:73259513-73259532 None:intergenic 40.0%
GATGCTGATGTTAAACCTGT+TGG - Chr7:73257470-73257489 MsG0780040121.01.T01:intron 40.0%
GGTGTCAAAAACTGCAAAAC+GGG + Chr7:73260144-73260163 None:intergenic 40.0%
GGTTTGGATTTGTCATCGTA+TGG + Chr7:73260663-73260682 None:intergenic 40.0%
GTTATTCGTCCCTGCAAATA+GGG - Chr7:73260809-73260828 MsG0780040121.01.T01:intron 40.0%
TCACTTAAAGGCAAGCTCAA+CGG - Chr7:73259050-73259069 MsG0780040121.01.T01:intron 40.0%
TCGTCATTGACAATGGTCAT+GGG - Chr7:73259272-73259291 MsG0780040121.01.T01:intron 40.0%
TGAATGGGGTTACTCACAAA+GGG - Chr7:73259331-73259350 MsG0780040121.01.T01:intron 40.0%
TGAGAAGTAGACTAATGGAG+AGG + Chr7:73259714-73259733 None:intergenic 40.0%
TGAGCTTGCCTTTAAGTGAT+GGG + Chr7:73259049-73259068 None:intergenic 40.0%
TGATCAAGGACCTTGACAAA+GGG + Chr7:73258565-73258584 None:intergenic 40.0%
TGGATCACAGGTATCATCAA+GGG - Chr7:73258882-73258901 MsG0780040121.01.T01:CDS 40.0%
TGTAGGCTTAATCATGGCTT+CGG - Chr7:73256335-73256354 MsG0780040121.01.T01:intron 40.0%
TGTTATTCGTCCCTGCAAAT+AGG - Chr7:73260808-73260827 MsG0780040121.01.T01:intron 40.0%
TTATAGTCCTCATGCTCAAG+AGG + Chr7:73259687-73259706 None:intergenic 40.0%
TTATTCGTCCCTGCAAATAG+GGG - Chr7:73260810-73260829 MsG0780040121.01.T01:intron 40.0%
TTCGTCATTGACAATGGTCA+TGG - Chr7:73259271-73259290 MsG0780040121.01.T01:intron 40.0%
TTGAGCTTGCCTTTAAGTGA+TGG + Chr7:73259050-73259069 None:intergenic 40.0%
TTGGATCACAGGTATCATCA+AGG - Chr7:73258881-73258900 MsG0780040121.01.T01:CDS 40.0%
! AAAGGCTTTTCCGAATTCTC+TGG - Chr7:73256561-73256580 MsG0780040121.01.T01:intron 40.0%
! AAGGTAGCCATAAACGGATT+TGG - Chr7:73257311-73257330 MsG0780040121.01.T01:intron 40.0%
! ACTTATAAGGTTGGATTGGG+CGG - Chr7:73260320-73260339 MsG0780040121.01.T01:intron 40.0%
! CTCACAAAGGGTTGTTGATT+TGG - Chr7:73259343-73259362 MsG0780040121.01.T01:intron 40.0%
! GACAATGCTTGATAGCATGT+AGG + Chr7:73259827-73259846 None:intergenic 40.0%
! GTACTAGCAAGTTGCGATTT+TGG + Chr7:73260384-73260403 None:intergenic 40.0%
! TAGCCATAAACGGATTTGGA+AGG - Chr7:73257315-73257334 MsG0780040121.01.T01:intron 40.0%
! TATTGCTATTGCAGGGAGTT+GGG - Chr7:73258334-73258353 MsG0780040121.01.T01:CDS 40.0%
! TGGTATCTCTGTTGATGGAA+AGG - Chr7:73257499-73257518 MsG0780040121.01.T01:intron 40.0%
! TTATTGCTATTGCAGGGAGT+TGG - Chr7:73258333-73258352 MsG0780040121.01.T01:CDS 40.0%
! TTGATGGCAATGACATCAAG+AGG + Chr7:73257386-73257405 None:intergenic 40.0%
! TTTAAGTGATGGGAGGACAA+GGG + Chr7:73259039-73259058 None:intergenic 40.0%
!! ACTTACTGCATTGGTTTGGA+AGG + Chr7:73256655-73256674 None:intergenic 40.0%
!! AGGCTCCAATTGATAATGTC+CGG + Chr7:73260569-73260588 None:intergenic 40.0%
!! ATCGCAACTTGCTAGTACTT+AGG - Chr7:73260386-73260405 MsG0780040121.01.T01:intron 40.0%
!! CGTTGATTCGTCATTGACAA+TGG - Chr7:73259265-73259284 MsG0780040121.01.T01:intron 40.0%
!! GATTTGGTGATTGAAGGAAC+TGG - Chr7:73258361-73258380 MsG0780040121.01.T01:CDS 40.0%
!! TCGCAACTTGCTAGTACTTA+GGG - Chr7:73260387-73260406 MsG0780040121.01.T01:intron 40.0%
!! TCTTTGAGACTTGAACAACG+AGG + Chr7:73259118-73259137 None:intergenic 40.0%
AAGGGCGGTACTTATAAGGT+TGG - Chr7:73260311-73260330 MsG0780040121.01.T01:intron 45.0%
AATGGTCATGGGAGATGACA+TGG - Chr7:73259283-73259302 MsG0780040121.01.T01:intron 45.0%
ACAGATTGTAGCAGCAACCA+GGG + Chr7:73260684-73260703 None:intergenic 45.0%
ACATGGTGAAGGTGATTGCT+TGG - Chr7:73259300-73259319 MsG0780040121.01.T01:intron 45.0%
ACCATCAACTGTACCAAGAG+TGG - Chr7:73260621-73260640 MsG0780040121.01.T01:intron 45.0%
ACGATGACAAATCCAAACCC+TGG - Chr7:73260664-73260683 MsG0780040121.01.T01:intron 45.0%
ACGGATTTGGAAGGATTGGA+AGG - Chr7:73257324-73257343 MsG0780040121.01.T01:intron 45.0%
ATATCAACTCGAGACGTAGG+TGG - Chr7:73256975-73256994 MsG0780040121.01.T01:intron 45.0%
ATCAAGAAGCCTTTGGTCAC+CGG + Chr7:73258934-73258953 None:intergenic 45.0%
ATGACGTGGCAGTCATTAAC+TGG + Chr7:73260920-73260939 None:intergenic 45.0%
ATTCTCCGCATTCATGCAAC+GGG + Chr7:73257110-73257129 None:intergenic 45.0%
CAATGACGAATCAACGGTTG+AGG + Chr7:73259261-73259280 None:intergenic 45.0%
CAGGGAGTTGGGAATAGATT+TGG - Chr7:73258345-73258364 MsG0780040121.01.T01:CDS 45.0%
CATTTGAAGGTTGGAAGCAG+TGG - Chr7:73257251-73257270 MsG0780040121.01.T01:intron 45.0%
CGTCAATTCCCATGCCATTA+TGG + Chr7:73260951-73260970 None:intergenic 45.0%
CTCATGAACCCAACCAAGTA+AGG + Chr7:73256195-73256214 None:intergenic 45.0%
CTGATCAAGGACCTTGACAA+AGG + Chr7:73258566-73258585 None:intergenic 45.0%
CTTGTCCTCCCATCACTTAA+AGG - Chr7:73259038-73259057 MsG0780040121.01.T01:intron 45.0%
GATTCTCCGCATTCATGCAA+CGG + Chr7:73257111-73257130 None:intergenic 45.0%
GCAGTCATTAACTGGGTCAA+GGG + Chr7:73260912-73260931 None:intergenic 45.0%
GGAAGGCCAAAACTGCAAAA+AGG - Chr7:73260292-73260311 MsG0780040121.01.T01:intron 45.0%
GGAATTGACGAAAATACCCC+TGG + Chr7:73260980-73260961 None:intergenic 45.0%
GTCATTGCCATCAATGACAC+CGG - Chr7:73257392-73257411 MsG0780040121.01.T01:intron 45.0%
GTTACGGAGACCAGAGAATT+CGG + Chr7:73256574-73256593 None:intergenic 45.0%
TACAGATTGTAGCAGCAACC+AGG + Chr7:73260685-73260704 None:intergenic 45.0%
TAGGCCCCCAAATCTATATG+TGG - Chr7:73259576-73259595 MsG0780040121.01.T01:intron 45.0%
TGACACCAACCACGTAAGTT+GGG + Chr7:73258474-73258493 None:intergenic 45.0%
TGACCAAGTCAATGCTGATG+TGG + Chr7:73260262-73260281 None:intergenic 45.0%
TGACGTGGCAGTCATTAACT+GGG + Chr7:73260919-73260938 None:intergenic 45.0%
TGCTGATGATATCATCAGCG+TGG + Chr7:73258513-73258532 None:intergenic 45.0%
TGGCTCTCACTTCCAGTTAT+TGG + Chr7:73259381-73259400 None:intergenic 45.0%
TGTAGTAAGATGTGGGTACG+TGG + Chr7:73256232-73256251 None:intergenic 45.0%
TTAAGCGACCCCTATTTGCA+GGG + Chr7:73260821-73260840 None:intergenic 45.0%
TTCCACTACAACACCTTTCC+TGG + Chr7:73257282-73257301 None:intergenic 45.0%
TTGAACCTTAAGAGCTGGGT+TGG + Chr7:73256376-73256395 None:intergenic 45.0%
TTGACACCAACCACGTAAGT+TGG + Chr7:73258475-73258494 None:intergenic 45.0%
TTGGGCGGTACTTATAAGGT+TGG - Chr7:73260335-73260354 MsG0780040121.01.T01:intron 45.0%
TTTAAGCGACCCCTATTTGC+AGG + Chr7:73260822-73260841 None:intergenic 45.0%
! AGTTGGGATGTCTCCTTTTC+CGG + Chr7:73258458-73258477 None:intergenic 45.0%
! CTTTAAGTGATGGGAGGACA+AGG + Chr7:73259040-73259059 None:intergenic 45.0%
! GTTAAACCTGTTGGCACTGA+TGG - Chr7:73257479-73257498 MsG0780040121.01.T01:intron 45.0%
! TACCGCCCTTTTTGCAGTTT+TGG + Chr7:73260301-73260320 None:intergenic 45.0%
! TGAAGGAACTGGAGTGTTTG+TGG - Chr7:73258372-73258391 MsG0780040121.01.T01:CDS 45.0%
! TGGATTGGGCGGTACTTATA+AGG - Chr7:73260331-73260350 MsG0780040121.01.T01:intron 45.0%
!! ATCCAGGAAAGGTGTTGTAG+TGG - Chr7:73257277-73257296 MsG0780040121.01.T01:intron 45.0%
!! CGCAACTTGCTAGTACTTAG+GGG - Chr7:73260388-73260407 MsG0780040121.01.T01:intron 45.0%
!! GCAACTTGCTAGTACTTAGG+GGG - Chr7:73260389-73260408 MsG0780040121.01.T01:intron 45.0%
!! TGGAATTGTGTGGTCTTGTG+TGG - Chr7:73257603-73257622 MsG0780040121.01.T01:intron 45.0%
!! TTCAGCACTCAGCATTGACT+TGG + Chr7:73260180-73260199 None:intergenic 45.0%
!! ATTAAATTAATAACAAAAAA+AGG - Chr7:73260771-73260790 MsG0780040121.01.T01:CDS 5.0%
!! TTAAAAGTAAAAAAAAAATT+CGG - Chr7:73261067-73261086 MsG0780040121.01.T01:five_prime_UTR 5.0%
!!! TTGTTATTAATTTAATTTAA+AGG + Chr7:73260767-73260786 None:intergenic 5.0%
!!! TTTTTTTTTTTTTAATTCTT+TGG - Chr7:73256517-73256536 MsG0780040121.01.T01:intron 5.0%
AAAGGGAGCAAGGCAGTTAG+TGG + Chr7:73258548-73258567 None:intergenic 50.0%
AACTTCAACCGGAGCAGCAA+AGG - Chr7:73259007-73259026 MsG0780040121.01.T01:intron 50.0%
AAGTCCCCGTTGCATGAATG+CGG - Chr7:73257102-73257121 MsG0780040121.01.T01:intron 50.0%
ACTACCACTCACTCCTACAC+CGG - Chr7:73258912-73258931 MsG0780040121.01.T01:CDS 50.0%
ACTCATCAGCTAGCCACTCT+TGG + Chr7:73260637-73260656 None:intergenic 50.0%
AGCAGTGGAAGATCCAGGAA+AGG - Chr7:73257266-73257285 MsG0780040121.01.T01:intron 50.0%
AGGAGACATCCCAACTTACG+TGG - Chr7:73258462-73258481 MsG0780040121.01.T01:intron 50.0%
AGGTCAACAACCGAGACGTT+TGG + Chr7:73259098-73259117 None:intergenic 50.0%
ATGCTAGCCACCGTGATCTA+AGG - Chr7:73258952-73258971 MsG0780040121.01.T01:CDS 50.0%
ATGGAAGGTTGGCAGGGTTA+CGG + Chr7:73257544-73257563 None:intergenic 50.0%
ATTGCCATCAATGACACCGG+AGG - Chr7:73257395-73257414 MsG0780040121.01.T01:intron 50.0%
CATGGGAGATGACATGGTGA+AGG - Chr7:73259289-73259308 MsG0780040121.01.T01:intron 50.0%
CATTACCGCAGGAGCTAAGA+AGG - Chr7:73258417-73258436 MsG0780040121.01.T01:CDS 50.0%
CTCTTGCACGCCTTAGATCA+CGG + Chr7:73258965-73258984 None:intergenic 50.0%
GACATCCCAACTTACGTGGT+TGG - Chr7:73258466-73258485 MsG0780040121.01.T01:intron 50.0%
GAGATACCATCAGTGCCAAC+AGG + Chr7:73257488-73257507 None:intergenic 50.0%
GAGATGTTGGCATGGTCGTA+AGG - Chr7:73257355-73257374 MsG0780040121.01.T01:intron 50.0%
GAGTACCTTCTTAGCTCCTG+CGG + Chr7:73258425-73258444 None:intergenic 50.0%
GCCACTCTTGGTACAGTTGA+TGG + Chr7:73260625-73260644 None:intergenic 50.0%
GGCAGTCATTAACTGGGTCA+AGG + Chr7:73260913-73260932 None:intergenic 50.0%
GGCCAAAACTGCAAAAAGGG+CGG - Chr7:73260296-73260315 MsG0780040121.01.T01:intron 50.0%
GGCTAGCATCAAGAAGCCTT+TGG + Chr7:73258941-73258960 None:intergenic 50.0%
GTAGGAGTGAGTGGTAGTCA+TGG + Chr7:73258910-73258929 None:intergenic 50.0%
TAACCCTGCCAACCTTCCAT+GGG - Chr7:73257544-73257563 MsG0780040121.01.T01:intron 50.0%
TCATGCAACGGGGACTTAAG+TGG + Chr7:73257099-73257118 None:intergenic 50.0%
TCTGGTCTCCGTAACTCATC+AGG - Chr7:73256579-73256598 MsG0780040121.01.T01:intron 50.0%
TGCAAAACGGGCCGTACTTA+GGG + Chr7:73260132-73260151 None:intergenic 50.0%
TGTAGCCAACCCAGCTCTTA+AGG - Chr7:73256368-73256387 MsG0780040121.01.T01:intron 50.0%
TGTGCCAACACCAAACGTCT+CGG - Chr7:73259085-73259104 MsG0780040121.01.T01:intron 50.0%
TTCTCCGCATTCATGCAACG+GGG + Chr7:73257109-73257128 None:intergenic 50.0%
TTGGAAGCAGTGGAAGATCC+AGG - Chr7:73257261-73257280 MsG0780040121.01.T01:intron 50.0%
TTGTAGCAGCAACCAGGGTT+TGG + Chr7:73260679-73260698 None:intergenic 50.0%
TTTCAGAGACAGTGCAGCCA+AGG - Chr7:73259166-73259185 MsG0780040121.01.T01:intron 50.0%
TTTGCTGCTCCGGTTGAAGT+TGG + Chr7:73259008-73259027 None:intergenic 50.0%
! AGAGGCTTGCTTTACACCTC+CGG + Chr7:73257414-73257433 None:intergenic 50.0%
! GCTTGCCTTTAAGTGATGGG+AGG + Chr7:73259046-73259065 None:intergenic 50.0%
! GGAGTGTTTGTGGACAGAGA+AGG - Chr7:73258382-73258401 MsG0780040121.01.T01:CDS 50.0%
! GTTGGGATGTCTCCTTTTCC+GGG + Chr7:73258457-73258476 None:intergenic 50.0%
! TTGGGATGTCTCCTTTTCCG+GGG + Chr7:73258456-73258475 None:intergenic 50.0%
! TTTGTGGACAGAGAAGGTGC+TGG - Chr7:73258388-73258407 MsG0780040121.01.T01:CDS 50.0%
!! ACAACCGAGACGTTTGGTGT+TGG + Chr7:73259092-73259111 None:intergenic 50.0%
!! CGCAGTATCGCATTAGCCTT+AGG - Chr7:73258237-73258256 MsG0780040121.01.T01:CDS 50.0%
!! GTGGTTGGTGTCAATGCTGA+TGG - Chr7:73258481-73258500 MsG0780040121.01.T01:intron 50.0%
!! TACACCTCCGGTGTCATTGA+TGG + Chr7:73257402-73257421 None:intergenic 50.0%
!! TTGTGGACAGAGAAGGTGCT+GGG - Chr7:73258389-73258408 MsG0780040121.01.T01:CDS 50.0%
AACCCTGCCAACCTTCCATG+GGG - Chr7:73257545-73257564 MsG0780040121.01.T01:intron 55.0%
AAGCCTTTGGTCACCGGTGT+AGG + Chr7:73258928-73258947 None:intergenic 55.0%
ACTCCTACACCGGTGACCAA+AGG - Chr7:73258922-73258941 MsG0780040121.01.T01:CDS 55.0%
AGCTTACCCCCATGGAAGGT+TGG + Chr7:73257555-73257574 None:intergenic 55.0%
ATCCCTGACTACAGGGTAGC+CGG - Chr7:73257128-73257147 MsG0780040121.01.T01:intron 55.0%
ATCCGGCTACCCTGTAGTCA+GGG + Chr7:73257133-73257152 None:intergenic 55.0%
CTGCAAAACGGGCCGTACTT+AGG + Chr7:73260133-73260152 None:intergenic 55.0%
CTGCCTTGCTCCCTTTGTCA+AGG - Chr7:73258552-73258571 MsG0780040121.01.T01:intron 55.0%
GAAGAGCTTACCCCCATGGA+AGG + Chr7:73257559-73257578 None:intergenic 55.0%
GAAGGAAGAGCTTACCCCCA+TGG + Chr7:73257563-73257582 None:intergenic 55.0%
GAGAATACCGCTCAGCTCCT+TGG + Chr7:73259186-73259205 None:intergenic 55.0%
GATGTGGGTACGTGGATGTG+TGG + Chr7:73256224-73256243 None:intergenic 55.0%
GCAAAACGGGCCGTACTTAG+GGG + Chr7:73260131-73260150 None:intergenic 55.0%
GCGGAGAATCCCTGACTACA+GGG - Chr7:73257121-73257140 MsG0780040121.01.T01:intron 55.0%
GGACCTTGACAAAGGGAGCA+AGG + Chr7:73258558-73258577 None:intergenic 55.0%
GTAACCCTGCCAACCTTCCA+TGG - Chr7:73257543-73257562 MsG0780040121.01.T01:intron 55.0%
TGCGGAGAATCCCTGACTAC+AGG - Chr7:73257120-73257139 MsG0780040121.01.T01:intron 55.0%
TTGCACGCCTTAGATCACGG+TGG + Chr7:73258962-73258981 None:intergenic 55.0%
! AAGGTACTCATCACAGCCCC+CGG - Chr7:73258436-73258455 MsG0780040121.01.T01:CDS 55.0%
! TGGGATGTCTCCTTTTCCGG+GGG + Chr7:73258455-73258474 None:intergenic 55.0%
!! CGGCCACATCAGCATTGACT+TGG - Chr7:73260256-73260275 MsG0780040121.01.T01:intron 55.0%
AACCGGAGCAGCAAAGGCAG+TGG - Chr7:73259013-73259032 MsG0780040121.01.T01:intron 60.0%
ACCCCCATGGAAGGTTGGCA+GGG + Chr7:73257550-73257569 None:intergenic 60.0%
ACCCTGCCAACCTTCCATGG+GGG - Chr7:73257546-73257565 MsG0780040121.01.T01:intron 60.0%
AGTGCAGCCAAGGAGCTGAG+CGG - Chr7:73259176-73259195 MsG0780040121.01.T01:intron 60.0%
CTCATCACAGCCCCCGGAAA+AGG - Chr7:73258442-73258461 MsG0780040121.01.T01:CDS 60.0%
GATCCGGCTACCCTGTAGTC+AGG + Chr7:73257134-73257153 None:intergenic 60.0%
GTCACCGGTGTAGGAGTGAG+TGG + Chr7:73258919-73258938 None:intergenic 60.0%
TACCCCCATGGAAGGTTGGC+AGG + Chr7:73257551-73257570 None:intergenic 60.0%
! GCTGGGAAGCACATTACCGC+AGG - Chr7:73258406-73258425 MsG0780040121.01.T01:CDS 60.0%
GGCCACTGCCTTTGCTGCTC+CGG + Chr7:73259018-73259037 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 73256130 73261223 73256130 ID=MsG0780040121.01;Name=MsG0780040121.01
Chr7 mRNA 73256130 73261223 73256130 ID=MsG0780040121.01.T01;Parent=MsG0780040121.01;Name=MsG0780040121.01.T01;_AED=0.43;_eAED=0.43;_QI=218|1|1|1|0.6|0.5|6|182|404
Chr7 exon 73256130 73256176 73256130 ID=MsG0780040121.01.T01:exon:13172;Parent=MsG0780040121.01.T01
Chr7 exon 73257824 73258461 73257824 ID=MsG0780040121.01.T01:exon:13171;Parent=MsG0780040121.01.T01
Chr7 five_prime_UTR 73261006 73261223 73261006 ID=MsG0780040121.01.T01:five_prime_utr;Parent=MsG0780040121.01.T01
Chr7 CDS 73260964 73261005 73260964 ID=MsG0780040121.01.T01:cds;Parent=MsG0780040121.01.T01
Chr7 CDS 73260685 73260801 73260685 ID=MsG0780040121.01.T01:cds;Parent=MsG0780040121.01.T01
Chr7 CDS 73259786 73260093 73259786 ID=MsG0780040121.01.T01:cds;Parent=MsG0780040121.01.T01
Chr7 CDS 73258761 73259005 73258761 ID=MsG0780040121.01.T01:cds;Parent=MsG0780040121.01.T01
Chr7 CDS 73257959 73258461 73257959 ID=MsG0780040121.01.T01:cds;Parent=MsG0780040121.01.T01
Chr7 three_prime_UTR 73257824 73257958 73257824 ID=MsG0780040121.01.T01:three_prime_utr;Parent=MsG0780040121.01.T01
Chr7 three_prime_UTR 73256130 73256176 73256130 ID=MsG0780040121.01.T01:three_prime_utr;Parent=MsG0780040121.01.T01
Chr7 mRNA 73257692 73261223 73257692 ID=MsG0780040121.01.T02;Parent=MsG0780040121.01;Name=MsG0780040121.01.T02;_AED=0.43;_eAED=0.43;_QI=218|1|1|1|0.75|0.8|5|267|404
Chr7 exon 73257692 73258461 73257692 ID=MsG0780040121.01.T02:exon:13173;Parent=MsG0780040121.01.T02
Chr7 five_prime_UTR 73261006 73261223 73261006 ID=MsG0780040121.01.T02:five_prime_utr;Parent=MsG0780040121.01.T02
Chr7 CDS 73260964 73261005 73260964 ID=MsG0780040121.01.T02:cds;Parent=MsG0780040121.01.T02
Chr7 CDS 73260685 73260801 73260685 ID=MsG0780040121.01.T02:cds;Parent=MsG0780040121.01.T02
Chr7 CDS 73259786 73260093 73259786 ID=MsG0780040121.01.T02:cds;Parent=MsG0780040121.01.T02
Chr7 CDS 73258761 73259005 73258761 ID=MsG0780040121.01.T02:cds;Parent=MsG0780040121.01.T02
Chr7 CDS 73257959 73258461 73257959 ID=MsG0780040121.01.T02:cds;Parent=MsG0780040121.01.T02
Chr7 three_prime_UTR 73257692 73257958 73257692 ID=MsG0780040121.01.T02:three_prime_utr;Parent=MsG0780040121.01.T02
Gene Sequence

>MsG0780040121.01.T02

ATGGCTTCGGCTACTTTCTCTGTAGCCAACCCAGCTCTTAAGGTAAATGGGAAAGGCTTTTCCGAATTCTCTGGTCTCCGTAACTCATCAGGATATCTTCCCTTTTCTAGAAAAACTTCAGATGACTTTCATTCTGTCATTTCCTTCCAAACCAATGCAGTTGGAAGCAGTGGAAGATCCAGGAAAGGTGTTGTAGTGGAAGCAAAAATTAAGGTAGCCATAAACGGATTTGGAAGGATTGGAAGGAACTTCTTGAGATGTTGGCATGGTCGTAAGGACTCGCCTCTTGATGTCATTGCCATCAATGACACCGGAGGTGTAAAGCAAGCCTCTCACCTTCTCAAGTATGATTCTACACTTGGAATCTTTGATGCTGATGTTAAACCTGTTGGCACTGATGGTATCTCTGTTGATGGAAAGGTTATCAAAGTTGTCTCTGACCGTAACCCTGCCAACCTTCCATGGGGGGAGTTGGGAATAGATTTGGTGATTGAAGGAACTGGAGTGTTTGTGGACAGAGAAGGTGCTGGGAAGCACATTACCGCAGGAGCTAAGAAGGTACTCATCACAGCCCCCGGAAAAGGAGACATCCCAACTTACGTGGTTGGTGTCAATGCTGATGGTTACAGCCACGCTGATGATATCATCAGCAACGCTTCTTGCACCACTAACTGCCTTGCTCCCTTTGTCAAGGTCCTTGATCAGAAATTCGGTATCATCAAGGGTACCATGACTACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCTAGCCACCGTGATCTAAGGCGTGCAAGAGCAGCAGCTCTTAACATTGTGCCAACTTCAACCGGAGCAGCAAAGGCAGTGGCCCTTGTCCTCCCATCACTTAAAGGCAAGCTCAACGGTATTGCACTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGACCTCGTTGTTCAAGTCTCAAAGAAGACATTTGCTGAAGAAGTGAATGAGGCTTTCAGAGACAGTGCAGCCAAGGAGCTGAGCGGTATTCTCTCAGTTTGTGATGAGCCACTTGTGTCTGTAGATTTTAGGTGCACTGATGTGTCCTCAACCGTTGATTCGTCATTGACAATGGTCATGGGAGATGACATGGTGAAGGTGATTGCTTGGTATGATAATGAATGGGGTTACTCACAAAGGGTTGTTGATTTGGCTGACATTGTTGCCAATAACTGGAAGTGA

>MsG0780040121.01.T01

ATGGCTTCGGCTACTTTCTCTGTAGCCAACCCAGCTCTTAAGGTAAATGGGAAAGGCTTTTCCGAATTCTCTGGTCTCCGTAACTCATCAGGATATCTTCCCTTTTCTAGAAAAACTTCAGATGACTTTCATTCTGTCATTTCCTTCCAAACCAATGCAGTTGGAAGCAGTGGAAGATCCAGGAAAGGTGTTGTAGTGGAAGCAAAAATTAAGGTAGCCATAAACGGATTTGGAAGGATTGGAAGGAACTTCTTGAGATGTTGGCATGGTCGTAAGGACTCGCCTCTTGATGTCATTGCCATCAATGACACCGGAGGTGTAAAGCAAGCCTCTCACCTTCTCAAGTATGATTCTACACTTGGAATCTTTGATGCTGATGTTAAACCTGTTGGCACTGATGGTATCTCTGTTGATGGAAAGGTTATCAAAGTTGTCTCTGACCGTAACCCTGCCAACCTTCCATGGGGGGAGTTGGGAATAGATTTGGTGATTGAAGGAACTGGAGTGTTTGTGGACAGAGAAGGTGCTGGGAAGCACATTACCGCAGGAGCTAAGAAGGTACTCATCACAGCCCCCGGAAAAGGAGACATCCCAACTTACGTGGTTGGTGTCAATGCTGATGGTTACAGCCACGCTGATGATATCATCAGCAACGCTTCTTGCACCACTAACTGCCTTGCTCCCTTTGTCAAGGTCCTTGATCAGAAATTCGGTATCATCAAGGGTACCATGACTACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCTAGCCACCGTGATCTAAGGCGTGCAAGAGCAGCAGCTCTTAACATTGTGCCAACTTCAACCGGAGCAGCAAAGGCAGTGGCCCTTGTCCTCCCATCACTTAAAGGCAAGCTCAACGGTATTGCACTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGACCTCGTTGTTCAAGTCTCAAAGAAGACATTTGCTGAAGAAGTGAATGAGGCTTTCAGAGACAGTGCAGCCAAGGAGCTGAGCGGTATTCTCTCAGTTTGTGATGAGCCACTTGTGTCTGTAGATTTTAGGTGCACTGATGTGTCCTCAACCGTTGATTCGTCATTGACAATGGTCATGGGAGATGACATGGTGAAGGTGATTGCTTGGTATGATAATGAATGGGGTTACTCACAAAGGGTTGTTGATTTGGCTGACATTGTTGCCAATAACTGGAAGTGA

Protein sequence

>MsG0780040121.01.T02

MASATFSVANPALKVNGKGFSEFSGLRNSSGYLPFSRKTSDDFHSVISFQTNAVGSSGRSRKGVVVEAKIKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIKVVSDRNPANLPWGELGIDLVIEGTGVFVDREGAGKHITAGAKKVLITAPGKGDIPTYVVGVNADGYSHADDIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRDSAAKELSGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK*

>MsG0780040121.01.T01

MASATFSVANPALKVNGKGFSEFSGLRNSSGYLPFSRKTSDDFHSVISFQTNAVGSSGRSRKGVVVEAKIKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIKVVSDRNPANLPWGELGIDLVIEGTGVFVDREGAGKHITAGAKKVLITAPGKGDIPTYVVGVNADGYSHADDIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRDSAAKELSGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK*