AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043185.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043185.01.T01 MTR_8g031290 94.036 503 23 1 1 503 1 496 0.0 966
MsG0880043185.01.T01 MTR_7g076890 59.712 417 156 4 63 475 18 426 0.0 557
MsG0880043185.01.T01 MTR_8g031450 52.772 487 216 7 12 495 26 501 0.0 546
MsG0880043185.01.T01 MTR_7g076860 61.929 394 140 2 85 475 10 396 0.0 542
MsG0880043185.01.T01 MTR_0014s0440 53.009 432 195 2 65 495 70 494 0.0 521
MsG0880043185.01.T01 MTR_0014s0440 53.009 432 195 2 65 495 59 483 0.0 521
MsG0880043185.01.T01 MTR_8g031470 56.264 439 180 6 60 495 55 484 0.0 518
MsG0880043185.01.T01 MTR_5g010500 54.670 439 174 7 62 495 73 491 5.12e-172 494
MsG0880043185.01.T01 MTR_8g031470 50.569 439 168 7 60 495 55 447 1.60e-152 443
MsG0880043185.01.T01 MTR_3g464000 39.615 467 251 11 20 471 13 463 7.71e-116 350
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043185.01.T01 AT5G23850 54.651 430 183 3 65 489 99 521 0.0 532
MsG0880043185.01.T01 AT2G45830 50.000 480 214 7 31 495 39 507 1.29e-179 514
MsG0880043185.01.T01 AT2G45830 50.000 480 214 7 31 495 39 507 1.29e-179 514
MsG0880043185.01.T01 AT3G48980 50.676 444 202 5 62 495 88 524 1.11e-175 505
MsG0880043185.01.T01 AT3G48980 50.676 444 202 5 62 495 94 530 1.58e-175 505
MsG0880043185.01.T01 AT3G61270 47.531 486 243 4 11 495 10 484 6.42e-172 494
MsG0880043185.01.T01 AT2G45830 54.692 373 162 1 123 495 1 366 8.45e-163 466
MsG0880043185.01.T01 AT2G45830 54.692 373 162 1 123 495 1 366 8.45e-163 466
MsG0880043185.01.T01 AT2G45830 54.692 373 162 1 123 495 1 366 8.45e-163 466
MsG0880043185.01.T01 AT2G45830 54.692 373 162 1 123 495 1 366 8.45e-163 466
MsG0880043185.01.T01 AT3G61280 46.951 492 230 7 26 495 41 523 1.02e-162 472
MsG0880043185.01.T01 AT1G63420 49.028 463 212 7 49 495 113 567 8.28e-160 466
MsG0880043185.01.T01 AT3G61290 49.537 432 202 5 69 495 17 437 2.31e-156 453
MsG0880043185.01.T01 AT2G45840 48.046 435 206 6 68 495 86 507 1.53e-154 451
MsG0880043185.01.T01 AT3G61270 52.547 373 169 2 123 495 1 365 6.49e-150 434
MsG0880043185.01.T01 AT1G07220 44.181 421 214 8 86 501 97 501 6.28e-127 379
MsG0880043185.01.T01 AT1G63420 50.992 353 154 6 49 390 113 457 1.12e-120 362
MsG0880043185.01.T01 AT3G61280 43.544 333 157 7 26 336 41 364 2.59e-90 281

Find 85 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGAATACCTTACGCATTT+TGG 0.198779 8:-20296406 MsG0880043185.01.T01:CDS
TGAAGAGTTTGAGTTGTATA+AGG 0.263143 8:+20294820 None:intergenic
AAATTTCCAAGACACAAAAT+TGG 0.265181 8:-20296172 MsG0880043185.01.T01:CDS
CAAGGGATGTGTTCACAATA+TGG 0.273614 8:-20297134 MsG0880043185.01.T01:CDS
TGAGATTTGTTCTGAAAGTA+TGG 0.298990 8:-20294932 MsG0880043185.01.T01:CDS
CCACTATAACTCTTTATTCA+TGG 0.313202 8:+20294747 None:intergenic
CAAGAAGATGAAGGATAATA+AGG 0.313564 8:+20301323 None:intergenic
GATTAAGTTTGCAGTGGATT+GGG 0.334713 8:-20295827 MsG0880043185.01.T01:CDS
TGCTACCTTTGCACCACTAT+TGG 0.336505 8:-20295879 MsG0880043185.01.T01:CDS
TTGATGAAAGCTTTGACTAT+TGG 0.343613 8:+20301383 None:intergenic
CCCATGGTTTAAGATCTTCA+TGG 0.352277 8:+20297271 None:intergenic
CAAATTATCTATTATGTAGT+TGG 0.358455 8:+20295047 None:intergenic
TGGAAAATCAATGTACCTAT+AGG 0.373614 8:-20296152 MsG0880043185.01.T01:intron
CAAATCTCAACTGCTCCTTC+TGG 0.387979 8:+20294946 None:intergenic
CATGTCCACATTACTTCAAA+TGG 0.395790 8:-20297296 MsG0880043185.01.T01:CDS
AGATTAAGTTTGCAGTGGAT+TGG 0.397297 8:-20295828 MsG0880043185.01.T01:CDS
CTGATTGGACCTTCTGGGGT+TGG 0.400885 8:-20296936 MsG0880043185.01.T01:intron
AGCATTCCAATCATGTTCTT+CGG 0.418553 8:+20296328 None:intergenic
TTTCTAATGGGAGATACTGC+TGG 0.418858 8:+20296374 None:intergenic
TCATCAATTTCTACAAGAAA+AGG 0.421386 8:-20294800 MsG0880043185.01.T01:CDS
AAGGGATGTGTTCACAATAT+GGG 0.434287 8:-20297133 MsG0880043185.01.T01:CDS
AATAGTAGTGCTTGTTACCT+TGG 0.435094 8:+20297458 None:intergenic
GTAAAGAAATCATAGTACTT+TGG 0.447141 8:+20295910 None:intergenic
CTTAAACCATGGGAGAAAAC+AGG 0.450613 8:-20297261 MsG0880043185.01.T01:CDS
CATTGAGATGGATTGTTGTT+GGG 0.452569 8:+20297337 None:intergenic
AACAGGAATCACAAGAGAAA+TGG 0.456719 8:-20297244 MsG0880043185.01.T01:CDS
TGGCACTGATAGGCCAATAG+TGG 0.459833 8:+20295866 None:intergenic
AGATGGACAAGTTGAGTTTG+AGG 0.459852 8:+20297365 None:intergenic
ATGCATCCGAAGAACATGAT+TGG 0.460625 8:-20296334 MsG0880043185.01.T01:CDS
TAAGTACTTTGATCATCCAT+TGG 0.461467 8:-20301287 MsG0880043185.01.T01:CDS
CAACCCCAGAAGGTCCAATC+AGG 0.463664 8:+20296937 None:intergenic
AAGGAAACATTTCATGGTTG+AGG 0.463785 8:-20294890 MsG0880043185.01.T01:CDS
ACATTTCATGGTTGAGGGCA+TGG 0.463967 8:-20294884 MsG0880043185.01.T01:CDS
TGAAACATTAGCTCTAAATC+AGG 0.466642 8:+20297072 None:intergenic
TTGCGTAATGTTGTTTCCCA+TGG 0.478952 8:+20296464 None:intergenic
TTGTTTCCCATGGTCTTATG+TGG 0.487471 8:+20296474 None:intergenic
AGGAAACATTTCATGGTTGA+GGG 0.488331 8:-20294889 MsG0880043185.01.T01:CDS
GTTTGAGTTGTATAAGGAGA+AGG 0.488706 8:+20294826 None:intergenic
ATTGTTGTTGGGTAGGAAGA+TGG 0.490526 8:+20297348 None:intergenic
TCATTGAGATGGATTGTTGT+TGG 0.505823 8:+20297336 None:intergenic
ATTAAGTTTGCAGTGGATTG+GGG 0.507989 8:-20295826 MsG0880043185.01.T01:CDS
AAGGCAACAAGAATGTCAAA+TGG 0.510499 8:-20296433 MsG0880043185.01.T01:CDS
TGGTGCAAGGAAACATTTCA+TGG 0.530997 8:-20294896 MsG0880043185.01.T01:CDS
TTTAGGCTTGTGGTTGTGGA+TGG 0.532168 8:-20297195 MsG0880043185.01.T01:CDS
TTTCCTGATTGGACCTTCTG+GGG 0.541065 8:-20296940 MsG0880043185.01.T01:CDS
GGTACAAGATTTATGCAGAA+GGG 0.544570 8:-20295996 MsG0880043185.01.T01:CDS
AAGAAAAGGAGAATTTAATA+CGG 0.545091 8:-20294786 MsG0880043185.01.T01:CDS
ATGTTTCCTTGCACCACGCA+AGG 0.545435 8:+20294903 None:intergenic
TGGATCCATTTGAAGTAATG+TGG 0.546946 8:+20297291 None:intergenic
CCATGAATAAAGAGTTATAG+TGG 0.549650 8:-20294747 None:intergenic
ACAAGAGAAATGGTTGAAAG+AGG 0.550127 8:-20297234 MsG0880043185.01.T01:CDS
AGAAGATGATTACTTTGTCA+AGG 0.556652 8:+20295794 None:intergenic
GTTTCATTGTTGCAATCAAG+TGG 0.560568 8:+20297387 None:intergenic
GAGATGGATTGTTGTTGGGT+AGG 0.565179 8:+20297341 None:intergenic
ATGGTGAATCATCATTGAGA+TGG 0.565251 8:+20297325 None:intergenic
TCCATGAAGATCTTAAACCA+TGG 0.568320 8:-20297272 MsG0880043185.01.T01:CDS
ATGCAAAATCTTATCAAACA+AGG 0.570824 8:-20297152 MsG0880043185.01.T01:CDS
TAAGGAGAAGGCATTGTGCA+TGG 0.571719 8:+20294838 None:intergenic
TTGCAATCAAGTGGGAATTG+AGG 0.572072 8:+20297396 None:intergenic
GACTTACAAGGTCAATCCAA+TGG 0.574254 8:+20301271 None:intergenic
CAACAAGAATGTCAAATGGA+AGG 0.574995 8:-20296429 MsG0880043185.01.T01:CDS
TTTCCCTTCCAAAATGCGTA+AGG 0.576071 8:+20296398 None:intergenic
TGCAAAATCTTATCAAACAA+GGG 0.578981 8:-20297151 MsG0880043185.01.T01:CDS
CCATGAAGATCTTAAACCAT+GGG 0.585334 8:-20297271 MsG0880043185.01.T01:CDS
AGGTACAAGATTTATGCAGA+AGG 0.585736 8:-20295997 MsG0880043185.01.T01:CDS
CTGAGCTCCACATAAGACCA+TGG 0.593513 8:-20296481 MsG0880043185.01.T01:CDS
TGAAGAGATTAAGTTTGCAG+TGG 0.597774 8:-20295833 MsG0880043185.01.T01:CDS
TAATGTGGACATGATGAGGA+TGG 0.598426 8:+20297306 None:intergenic
TGGCTCTATGAACATAGTCA+TGG 0.599927 8:+20295930 None:intergenic
GTACAAGATTTATGCAGAAG+GGG 0.604983 8:-20295995 MsG0880043185.01.T01:CDS
TTTCATTGTTGCAATCAAGT+GGG 0.605373 8:+20297388 None:intergenic
AGGGATGTGTTCACAATATG+GGG 0.609928 8:-20297132 MsG0880043185.01.T01:CDS
CATGTTCCTTGCGTGGTGCA+AGG 0.615342 8:-20294909 MsG0880043185.01.T01:CDS
ATAGGCCAATAGTGGTGCAA+AGG 0.617869 8:+20295874 None:intergenic
ACATTACGCAATATACAAGA+AGG 0.621681 8:-20296452 MsG0880043185.01.T01:CDS
TAATACGGCAAGTGAAGACA+AGG 0.621694 8:-20294771 MsG0880043185.01.T01:CDS
GAAGCTTTACCAACCCCAGA+AGG 0.627314 8:+20296927 None:intergenic
TGAGCTCCACATAAGACCAT+GGG 0.632573 8:-20296480 MsG0880043185.01.T01:CDS
TTTATGCAGAAGGGGCAACA+TGG 0.637122 8:-20295987 MsG0880043185.01.T01:CDS
GAAGTAATGTGGACATGATG+AGG 0.645056 8:+20297302 None:intergenic
GTGCATGGAGGTGTATCACT+TGG 0.687133 8:+20294853 None:intergenic
AGTATGGCATGTTCCTTGCG+TGG 0.688064 8:-20294916 MsG0880043185.01.T01:CDS
GGAGAAGGCATTGTGCATGG+AGG 0.725676 8:+20294841 None:intergenic
AATACGGCAAGTGAAGACAA+GGG 0.753746 8:-20294770 MsG0880043185.01.T01:CDS
TTAGAGCTAATGTTTCAATG+TGG 0.759514 8:-20297066 MsG0880043185.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATAATATTTTAAAATT+TGG - Chr8:20299426-20299445 MsG0880043185.01.T01:intron 0.0%
!! AAATGATGAATTATATTATT+GGG - Chr8:20298216-20298235 MsG0880043185.01.T01:intron 10.0%
!! TTAGTACAATTATTATTATT+TGG - Chr8:20297058-20297077 MsG0880043185.01.T01:CDS 10.0%
!! TTTATTTGTTTATTAGTTAT+TGG + Chr8:20297753-20297772 None:intergenic 10.0%
!!! AAAACTTTTTTTTTTAAACT+CGG + Chr8:20300836-20300855 None:intergenic 10.0%
!!! ACAAAAGTTTTTTTTTTTTT+TGG - Chr8:20295353-20295372 MsG0880043185.01.T01:intron 10.0%
!!! ATTGAATTTCTAAAATTATT+TGG - Chr8:20296503-20296522 MsG0880043185.01.T01:CDS 10.0%
!!! TTAAAAATTACTATTTTCAA+AGG + Chr8:20297726-20297745 None:intergenic 10.0%
!!! TTTACATTTTTTTCTTTTTA+GGG - Chr8:20299633-20299652 MsG0880043185.01.T01:intron 10.0%
!!! TTTTATTATTATTACAAAGA+TGG - Chr8:20297316-20297335 MsG0880043185.01.T01:CDS 10.0%
!! AAATATAATTTAACATGTGT+CGG - Chr8:20296448-20296467 MsG0880043185.01.T01:CDS 15.0%
!! AACAAAAAACATATTAAGAA+AGG - Chr8:20295761-20295780 MsG0880043185.01.T01:intron 15.0%
!! AATATAATTCATCATTTCAA+TGG + Chr8:20298213-20298232 None:intergenic 15.0%
!! AATGATGAATTATATTATTG+GGG - Chr8:20298217-20298236 MsG0880043185.01.T01:intron 15.0%
!! ACAAAAAACATATTAAGAAA+GGG - Chr8:20295762-20295781 MsG0880043185.01.T01:intron 15.0%
!! GAAATGATGAATTATATTAT+TGG - Chr8:20298215-20298234 MsG0880043185.01.T01:intron 15.0%
!! TAAATTATATTTGCAAACAT+TGG + Chr8:20296440-20296459 None:intergenic 15.0%
!! TTAATGTAAGTCATTTAAAA+TGG - Chr8:20296809-20296828 MsG0880043185.01.T01:intron 15.0%
!!! AACGTTTGTATATAATATTT+TGG - Chr8:20295673-20295692 MsG0880043185.01.T01:intron 15.0%
!!! ACGTTTGTATATAATATTTT+GGG - Chr8:20295674-20295693 MsG0880043185.01.T01:intron 15.0%
!!! ATACTTTTTCATTTGTAATA+TGG - Chr8:20297207-20297226 MsG0880043185.01.T01:CDS 15.0%
!!! ATATTTTATAGTTATCAAGA+AGG + Chr8:20295924-20295943 None:intergenic 15.0%
!!! CAAGTCATATTTTTTTTTTT+TGG - Chr8:20299267-20299286 MsG0880043185.01.T01:intron 15.0%
!!! GTATTATTTTAAAAATAGCT+TGG + Chr8:20297191-20297210 None:intergenic 15.0%
!!! GTTTACATTTTTTTCTTTTT+AGG - Chr8:20299632-20299651 MsG0880043185.01.T01:intron 15.0%
!!! GTTTTTGATGAAAAATTATT+TGG - Chr8:20296536-20296555 MsG0880043185.01.T01:intron 15.0%
!!! TAATGTAAGTCATTTAAAAT+GGG - Chr8:20296810-20296829 MsG0880043185.01.T01:intron 15.0%
!!! TATTATTTGGCTTATATAAA+GGG - Chr8:20297071-20297090 MsG0880043185.01.T01:CDS 15.0%
!!! TCATCTCTTTTTTTTTTTTT+TGG - Chr8:20297011-20297030 MsG0880043185.01.T01:CDS 15.0%
!!! TTAATATTTACTGGTTAATA+CGG + Chr8:20301039-20301058 None:intergenic 15.0%
!!! TTATTATTTGGCTTATATAA+AGG - Chr8:20297070-20297089 MsG0880043185.01.T01:CDS 15.0%
!!! TTTTTTTTTTGGTTTGATTT+AGG - Chr8:20297022-20297041 MsG0880043185.01.T01:CDS 15.0%
!! AAAATTATTTGCATACCTAT+AGG + Chr8:20300003-20300022 None:intergenic 20.0%
!! AAACATAACCTTAGTTTAAT+TGG - Chr8:20300900-20300919 MsG0880043185.01.T01:intron 20.0%
!! AAATATAATGAGGATGATAA+TGG + Chr8:20297902-20297921 None:intergenic 20.0%
!! AAATATATTACCACAACAAA+AGG + Chr8:20297512-20297531 None:intergenic 20.0%
!! AACAATGCATAATATATACA+AGG + Chr8:20297141-20297160 None:intergenic 20.0%
!! AAGAAAAGGAGAATTTAATA+CGG - Chr8:20301351-20301370 MsG0880043185.01.T01:CDS 20.0%
!! AATGACTTACATTAAAAATG+TGG + Chr8:20296804-20296823 None:intergenic 20.0%
!! AATGTTAAAGATATGAATGA+AGG + Chr8:20298073-20298092 None:intergenic 20.0%
!! ACCTAAAATCAAAATGATTT+AGG - Chr8:20299373-20299392 MsG0880043185.01.T01:intron 20.0%
!! AGTAATTAACCAGTAAATAT+TGG + Chr8:20300943-20300962 None:intergenic 20.0%
!! ATACAACAAAACAAAAAGAT+GGG - Chr8:20294779-20294798 MsG0880043185.01.T01:CDS 20.0%
!! ATCTATTGAAATAAGTAATG+AGG + Chr8:20297565-20297584 None:intergenic 20.0%
!! ATGATGAATTATATTATTGG+GGG - Chr8:20298218-20298237 MsG0880043185.01.T01:intron 20.0%
!! ATGCATTTAATTCCAATTAA+AGG + Chr8:20299241-20299260 None:intergenic 20.0%
!! ATGTTAAAGATATGAATGAA+GGG + Chr8:20298072-20298091 None:intergenic 20.0%
!! CAAATTATCTATTATGTAGT+TGG + Chr8:20301093-20301112 None:intergenic 20.0%
!! GTTTGTGTTGAAATTATTTA+TGG + Chr8:20299470-20299489 None:intergenic 20.0%
!! TCTAATTAAAGTGAAATAGA+AGG - Chr8:20299594-20299613 MsG0880043185.01.T01:intron 20.0%
!! TGCATTTAATTCCAATTAAA+GGG + Chr8:20299240-20299259 None:intergenic 20.0%
!! TTTGAACAATTAAGTTATGT+TGG - Chr8:20295052-20295071 MsG0880043185.01.T01:CDS 20.0%
!!! ATCTTTAACATTCTTTTTCT+TGG - Chr8:20298081-20298100 MsG0880043185.01.T01:intron 20.0%
!!! CGTTTGTATATAATATTTTG+GGG - Chr8:20295675-20295694 MsG0880043185.01.T01:intron 20.0%
!!! GTTATAGTTTTAAAAACCTA+AGG + Chr8:20297448-20297467 None:intergenic 20.0%
!!! TAAAATGATATTTTCCTTAC+TGG + Chr8:20295104-20295123 None:intergenic 20.0%
!!! TAAATCATTTTGATTTTAGG+TGG + Chr8:20299374-20299393 None:intergenic 20.0%
!!! TGATAATATAGTTTTGTTCT+GGG - Chr8:20300489-20300508 MsG0880043185.01.T01:intron 20.0%
!!! TTTTTATGATTATTTGTGCA+TGG - Chr8:20299529-20299548 MsG0880043185.01.T01:intron 20.0%
! AAAAAGTCAAAGTAAGTCAA+AGG - Chr8:20295608-20295627 MsG0880043185.01.T01:intron 25.0%
! AAAACATCATGAGGAATAAA+TGG - Chr8:20296340-20296359 MsG0880043185.01.T01:CDS 25.0%
! AAACTTGTATGACTTGAATT+TGG - Chr8:20295442-20295461 MsG0880043185.01.T01:intron 25.0%
! AAAGAAAAACAAGAAGATGA+AGG + Chr8:20294826-20294845 None:intergenic 25.0%
! AAATTTCCAAGACACAAAAT+TGG - Chr8:20299965-20299984 MsG0880043185.01.T01:intron 25.0%
! AATAAATAACTCACTTAACC+TGG - Chr8:20295802-20295821 MsG0880043185.01.T01:intron 25.0%
! AATTAATTTCTTGTCCAGTA+AGG - Chr8:20295087-20295106 MsG0880043185.01.T01:intron 25.0%
! AATTGAGTCCAATTAAACTA+AGG + Chr8:20300911-20300930 None:intergenic 25.0%
! ACTTTACATTTCTCTTAAGA+TGG - Chr8:20295700-20295719 MsG0880043185.01.T01:intron 25.0%
! AGTATTAAGATTGCTTATAC+TGG - Chr8:20295276-20295295 MsG0880043185.01.T01:intron 25.0%
! ATCAACTGTGTAATGTATTA+TGG + Chr8:20296602-20296621 None:intergenic 25.0%
! ATCAATATGTCACATACTAA+TGG + Chr8:20298147-20298166 None:intergenic 25.0%
! ATCCTAACTTCAATATAGTT+TGG + Chr8:20296964-20296983 None:intergenic 25.0%
! ATGCAAAATCTTATCAAACA+AGG - Chr8:20298985-20299004 MsG0880043185.01.T01:intron 25.0%
! ATTATTATTACAAAGATGGC+TGG - Chr8:20297320-20297339 MsG0880043185.01.T01:CDS 25.0%
! ATTCTTGCATGTAAAAAACA+TGG + Chr8:20296018-20296037 None:intergenic 25.0%
! ATTGAAATAATGTTGGAGTT+TGG - Chr8:20296272-20296291 MsG0880043185.01.T01:intron 25.0%
! CATAATATATACAAGGTTTG+AGG + Chr8:20297134-20297153 None:intergenic 25.0%
! CATACAACAAAACAAAAAGA+TGG - Chr8:20294778-20294797 MsG0880043185.01.T01:CDS 25.0%
! CATAGCTATATGAAAATTGT+TGG - Chr8:20296109-20296128 MsG0880043185.01.T01:intron 25.0%
! GATGAAAAATTATTTGGTTG+AGG - Chr8:20296542-20296561 MsG0880043185.01.T01:intron 25.0%
! GTAAAGAAATCATAGTACTT+TGG + Chr8:20300230-20300249 None:intergenic 25.0%
! GTAACCTATATATAGATAGA+AGG - Chr8:20298438-20298457 MsG0880043185.01.T01:intron 25.0%
! GTTATAGATGTTAAACACTT+TGG - Chr8:20298015-20298034 MsG0880043185.01.T01:intron 25.0%
! GTTGCGATTATTAATTAGTA+TGG - Chr8:20298416-20298435 MsG0880043185.01.T01:intron 25.0%
! TAATTGCTATGCATTCTTTA+TGG + Chr8:20297647-20297666 None:intergenic 25.0%
! TAGTACTTCCAAAAAAAATC+AGG + Chr8:20294987-20295006 None:intergenic 25.0%
! TCAACCTTCTATCTATATAT+AGG + Chr8:20298445-20298464 None:intergenic 25.0%
! TCAACTGTGTAATGTATTAT+GGG + Chr8:20296601-20296620 None:intergenic 25.0%
! TCAATATGTCACATACTAAT+GGG + Chr8:20298146-20298165 None:intergenic 25.0%
! TCATCAATTTCTACAAGAAA+AGG - Chr8:20301337-20301356 MsG0880043185.01.T01:CDS 25.0%
! TCTCCACAATAATGAAAAAT+AGG + Chr8:20299155-20299174 None:intergenic 25.0%
! TGAAATATGATAGACTTACA+AGG + Chr8:20297954-20297973 None:intergenic 25.0%
! TGCAAAATCTTATCAAACAA+GGG - Chr8:20298986-20299005 MsG0880043185.01.T01:intron 25.0%
! TGGACAAGAAAAAATTTCAA+GGG - Chr8:20299108-20299127 MsG0880043185.01.T01:intron 25.0%
! TTCTTGCATGTAAAAAACAT+GGG + Chr8:20296017-20296036 None:intergenic 25.0%
! TTGAGATTGATCAATCTAAT+CGG - Chr8:20298635-20298654 MsG0880043185.01.T01:intron 25.0%
!! ATGTGTCATGTTTTATGTTA+AGG - Chr8:20300120-20300139 MsG0880043185.01.T01:intron 25.0%
!! GAAAAAACATGTCACATTTT+AGG - Chr8:20298925-20298944 MsG0880043185.01.T01:intron 25.0%
!! TAGTGGCATTTAAATGTTTT+AGG + Chr8:20300983-20301002 None:intergenic 25.0%
!! TGAATTTCGTCTTTGAAAAA+TGG + Chr8:20299898-20299917 None:intergenic 25.0%
!! TTAACATTCTTTTTCTTGGT+TGG - Chr8:20298085-20298104 MsG0880043185.01.T01:intron 25.0%
!!! CTGATAATATAGTTTTGTTC+TGG - Chr8:20300488-20300507 MsG0880043185.01.T01:intron 25.0%
!!! GAAAAGCATTGAAATAATGT+TGG - Chr8:20296265-20296284 MsG0880043185.01.T01:intron 25.0%
!!! GCCTAAATCATTTTGATTTT+AGG + Chr8:20299377-20299396 None:intergenic 25.0%
!!! TTTTCGAGTTCTTTTCTAAT+GGG + Chr8:20299778-20299797 None:intergenic 25.0%
AAACAGTTACATCATGCAAT+TGG - Chr8:20297772-20297791 MsG0880043185.01.T01:intron 30.0%
AACAATAACATGTAAGAGGT+TGG - Chr8:20295631-20295650 MsG0880043185.01.T01:intron 30.0%
AACCAGTAAATATTAACTGC+AGG - Chr8:20301043-20301062 MsG0880043185.01.T01:intron 30.0%
AAGCTTCTATTCCCTTTAAT+TGG - Chr8:20299226-20299245 MsG0880043185.01.T01:intron 30.0%
AAGGAACAATAACATGTAAG+AGG - Chr8:20295627-20295646 MsG0880043185.01.T01:intron 30.0%
AAGGTTATGTTTGTGTATGT+AGG + Chr8:20300892-20300911 None:intergenic 30.0%
AATTATGACAATTGAGGGAA+AGG + Chr8:20298121-20298140 None:intergenic 30.0%
ACAATAACATGTAAGAGGTT+GGG - Chr8:20295632-20295651 MsG0880043185.01.T01:intron 30.0%
ACATTACGCAATATACAAGA+AGG - Chr8:20299685-20299704 MsG0880043185.01.T01:intron 30.0%
ACATTCTAGCCAATATTTAC+TGG - Chr8:20300931-20300950 MsG0880043185.01.T01:intron 30.0%
AGAAGATGATTACTTTGTCA+AGG + Chr8:20300346-20300365 None:intergenic 30.0%
AGCTTGCAACAAATATAATG+AGG + Chr8:20297912-20297931 None:intergenic 30.0%
ATACAAACGTTCCAATAGTT+TGG + Chr8:20295664-20295683 None:intergenic 30.0%
CAAGAAGATGAAGGATAATA+AGG + Chr8:20294817-20294836 None:intergenic 30.0%
CAATAATGAAAAATAGGTGG+AGG + Chr8:20299149-20299168 None:intergenic 30.0%
CATCAGAAGCTATAAACTAA+AGG + Chr8:20294949-20294968 None:intergenic 30.0%
CATTCTTTATGGTGATATCA+CGG + Chr8:20297636-20297655 None:intergenic 30.0%
CCACAATAATGAAAAATAGG+TGG + Chr8:20299152-20299171 None:intergenic 30.0%
CCACTATAACTCTTTATTCA+TGG - Chr8:20300997-20301016 MsG0880043185.01.T01:intron 30.0%
CCATGAATAAAGAGTTATAG+TGG + Chr8:20301409-20301390 None:intergenic 30.0%
CTTAATACTGTGAGTATGTT+TGG + Chr8:20295265-20295284 None:intergenic 30.0%
CTTAGAATTCTACAAGCTAA+TGG + Chr8:20297802-20297821 None:intergenic 30.0%
GACCAAACTATATTGAAGTT+AGG - Chr8:20296959-20296978 MsG0880043185.01.T01:CDS 30.0%
GTGGACAAGAAAAAATTTCA+AGG - Chr8:20299107-20299126 MsG0880043185.01.T01:intron 30.0%
TAAACAAACATCATCTTACC+AGG + Chr8:20295823-20295842 None:intergenic 30.0%
TAAGTACTTTGATCATCCAT+TGG - Chr8:20294850-20294869 MsG0880043185.01.T01:CDS 30.0%
TACCAGATTGAAAAATCTCA+TGG - Chr8:20298262-20298281 MsG0880043185.01.T01:intron 30.0%
TATTTGGTATATGTGCACTA+AGG - Chr8:20295395-20295414 MsG0880043185.01.T01:intron 30.0%
TCAATGTGGTGATAAAAATG+TGG - Chr8:20299085-20299104 MsG0880043185.01.T01:intron 30.0%
TCTTCCACAATAACCAATTT+GGG - Chr8:20300627-20300646 MsG0880043185.01.T01:intron 30.0%
TGGAAAATCAATGTACCTAT+AGG - Chr8:20299985-20300004 MsG0880043185.01.T01:intron 30.0%
TTAAATTAGCCCACCTAAAT+TGG + Chr8:20300584-20300603 None:intergenic 30.0%
TTAGAGCTAATGTTTCAATG+TGG - Chr8:20299071-20299090 MsG0880043185.01.T01:intron 30.0%
TTCAAACCAAAAATACCAGA+AGG - Chr8:20301176-20301195 MsG0880043185.01.T01:intron 30.0%
TTCTTCCACAATAACCAATT+TGG - Chr8:20300626-20300645 MsG0880043185.01.T01:intron 30.0%
TTGGGAATAAACCAAACTAT+TGG - Chr8:20295650-20295669 MsG0880043185.01.T01:intron 30.0%
TTTGGATAAGAGAACTTAAG+AGG + Chr8:20295247-20295266 None:intergenic 30.0%
! AAACATTGGTCTCTAACTAA+AGG + Chr8:20296426-20296445 None:intergenic 30.0%
! AACATTGGTCTCTAACTAAA+GGG + Chr8:20296425-20296444 None:intergenic 30.0%
! AATCTCTTCACACATGTTTT+TGG + Chr8:20300294-20300313 None:intergenic 30.0%
! ATAGAATACCTTACGCATTT+TGG - Chr8:20299731-20299750 MsG0880043185.01.T01:intron 30.0%
! ATTTTTGTTCTTTCAGTCCA+AGG - Chr8:20298662-20298681 MsG0880043185.01.T01:intron 30.0%
! CTAAATCAGGTATTTTTCCA+GGG + Chr8:20299055-20299074 None:intergenic 30.0%
! GATTTTCCAATTTTGTGTCT+TGG + Chr8:20299974-20299993 None:intergenic 30.0%
! GGGGAATTTTACAACTTTTA+AGG - Chr8:20299024-20299043 MsG0880043185.01.T01:intron 30.0%
! GTAAGTCATTTAAAATGGGA+CGG - Chr8:20296814-20296833 MsG0880043185.01.T01:intron 30.0%
! TCTAAATCAGGTATTTTTCC+AGG + Chr8:20299056-20299075 None:intergenic 30.0%
! TCTTTATTTCCATTTCGTCA+TGG - Chr8:20298394-20298413 MsG0880043185.01.T01:intron 30.0%
! TTAGCATTACCTTTTGATGT+AGG - Chr8:20298472-20298491 MsG0880043185.01.T01:intron 30.0%
! TTGATGAAAGCTTTGACTAT+TGG + Chr8:20294757-20294776 None:intergenic 30.0%
! TTTTTGTACGAGTCAACTTT+GGG - Chr8:20295733-20295752 MsG0880043185.01.T01:intron 30.0%
!! CATTAGCTTGTAGAATTCTA+AGG - Chr8:20297800-20297819 MsG0880043185.01.T01:intron 30.0%
!! CCACCTATTTTTCATTATTG+TGG - Chr8:20299149-20299168 MsG0880043185.01.T01:intron 30.0%
!! TGAAACATTAGCTCTAAATC+AGG + Chr8:20299068-20299087 None:intergenic 30.0%
!! TGAAGAGTTTGAGTTGTATA+AGG + Chr8:20301320-20301339 None:intergenic 30.0%
!! TGAGATTTGTTCTGAAAGTA+TGG - Chr8:20301205-20301224 MsG0880043185.01.T01:intron 30.0%
!! TTGACATTGTTTTTCCTGAT+TGG - Chr8:20299186-20299205 MsG0880043185.01.T01:intron 30.0%
!! TTTTTGGTATATGTGCACTA+AGG - Chr8:20295369-20295388 MsG0880043185.01.T01:intron 30.0%
!!! AAAAGTTTTGTTCCACAATG+AGG - Chr8:20300847-20300866 MsG0880043185.01.T01:intron 30.0%
!!! AGTTGCTTCCTGATTTTTTT+TGG - Chr8:20294976-20294995 MsG0880043185.01.T01:CDS 30.0%
!!! ATGTGCACTAAGGTTTTATT+TGG - Chr8:20295379-20295398 MsG0880043185.01.T01:intron 30.0%
!!! CTTTTCGAGTTCTTTTCTAA+TGG + Chr8:20299779-20299798 None:intergenic 30.0%
AAAAACCTAAGGATGAAGAG+AGG + Chr8:20297437-20297456 None:intergenic 35.0%
AACAGGAATCACAAGAGAAA+TGG - Chr8:20298893-20298912 MsG0880043185.01.T01:intron 35.0%
AACCTCTTATCTCTATCTCA+GGG + Chr8:20298314-20298333 None:intergenic 35.0%
AAGGAAACATTTCATGGTTG+AGG - Chr8:20301247-20301266 MsG0880043185.01.T01:intron 35.0%
AAGGCAACAAGAATGTCAAA+TGG - Chr8:20299704-20299723 MsG0880043185.01.T01:intron 35.0%
AAGGGATGTGTTCACAATAT+GGG - Chr8:20299004-20299023 MsG0880043185.01.T01:intron 35.0%
AATTGTCATCCTTCAATCGA+CGG + Chr8:20296230-20296249 None:intergenic 35.0%
ACAAGAGAAATGGTTGAAAG+AGG - Chr8:20298903-20298922 MsG0880043185.01.T01:intron 35.0%
AGATTAAGTTTGCAGTGGAT+TGG - Chr8:20300309-20300328 MsG0880043185.01.T01:intron 35.0%
AGCATTCCAATCATGTTCTT+CGG + Chr8:20299812-20299831 None:intergenic 35.0%
AGGAAACATTTCATGGTTGA+GGG - Chr8:20301248-20301267 MsG0880043185.01.T01:intron 35.0%
AGGTACAAGATTTATGCAGA+AGG - Chr8:20300140-20300159 MsG0880043185.01.T01:intron 35.0%
ATGGTGAATCATCATTGAGA+TGG + Chr8:20298815-20298834 None:intergenic 35.0%
ATGTGGTGATAAAAATGTGG+TGG - Chr8:20299088-20299107 MsG0880043185.01.T01:intron 35.0%
CAACAAGAATGTCAAATGGA+AGG - Chr8:20299708-20299727 MsG0880043185.01.T01:intron 35.0%
CAGTGAATTGAATATGCGAA+AGG + Chr8:20297830-20297849 None:intergenic 35.0%
CATAGCAATTAGTACCATTG+GGG - Chr8:20297656-20297675 MsG0880043185.01.T01:intron 35.0%
CATCATGAGGAATAAATGGT+TGG - Chr8:20296344-20296363 MsG0880043185.01.T01:CDS 35.0%
CATGTCCACATTACTTCAAA+TGG - Chr8:20298841-20298860 MsG0880043185.01.T01:intron 35.0%
CCATGAAGATCTTAAACCAT+GGG - Chr8:20298866-20298885 MsG0880043185.01.T01:intron 35.0%
CTGTGTAATGTATTATGGGA+CGG + Chr8:20296597-20296616 None:intergenic 35.0%
CTTCCACAATAACCAATTTG+GGG - Chr8:20300628-20300647 MsG0880043185.01.T01:intron 35.0%
GAGATAGCATATGACTTACA+AGG + Chr8:20294881-20294900 None:intergenic 35.0%
GATGTTAAACACTTTGGTCA+TGG - Chr8:20298021-20298040 MsG0880043185.01.T01:intron 35.0%
GCATAGCAATTAGTACCATT+GGG - Chr8:20297655-20297674 MsG0880043185.01.T01:intron 35.0%
GGGAGAATTATGACAATTGA+GGG + Chr8:20298126-20298145 None:intergenic 35.0%
GGTACAAGATTTATGCAGAA+GGG - Chr8:20300141-20300160 MsG0880043185.01.T01:intron 35.0%
GTACAAGATTTATGCAGAAG+GGG - Chr8:20300142-20300161 MsG0880043185.01.T01:intron 35.0%
GTTGGAAATTAGAGCTATGA+TGG - Chr8:20296127-20296146 MsG0880043185.01.T01:intron 35.0%
GTTTCATTGTTGCAATCAAG+TGG + Chr8:20298753-20298772 None:intergenic 35.0%
TAACTGCAGGCACAAAAAAT+TGG - Chr8:20301056-20301075 MsG0880043185.01.T01:intron 35.0%
TATTGATGAAGAGAGAGTGA+AGG - Chr8:20298160-20298179 MsG0880043185.01.T01:intron 35.0%
TCCATGAAGATCTTAAACCA+TGG - Chr8:20298865-20298884 MsG0880043185.01.T01:intron 35.0%
TGAAGAGATTAAGTTTGCAG+TGG - Chr8:20300304-20300323 MsG0880043185.01.T01:intron 35.0%
TGCATAGCAATTAGTACCAT+TGG - Chr8:20297654-20297673 MsG0880043185.01.T01:intron 35.0%
TGCATGTAAAAAACATGGGA+TGG + Chr8:20296013-20296032 None:intergenic 35.0%
TGCCTGCAGTTAATATTTAC+TGG + Chr8:20301048-20301067 None:intergenic 35.0%
TGGGAGAATTATGACAATTG+AGG + Chr8:20298127-20298146 None:intergenic 35.0%
TGTGTTCTTCCTACATCAAA+AGG + Chr8:20298484-20298503 None:intergenic 35.0%
TGTTGAACATAATGACGAGA+TGG - Chr8:20297866-20297885 MsG0880043185.01.T01:intron 35.0%
TTCGCATATTCAATTCACTG+AGG - Chr8:20297830-20297849 MsG0880043185.01.T01:intron 35.0%
! AAAAAAGGAGCACATGTCTA+TGG - Chr8:20296186-20296205 MsG0880043185.01.T01:CDS 35.0%
! AATACCTTACGCATTTTGGA+AGG - Chr8:20299735-20299754 MsG0880043185.01.T01:intron 35.0%
! AATAGTAGTGCTTGTTACCT+TGG + Chr8:20298682-20298701 None:intergenic 35.0%
! ACATTGGTCTCTAACTAAAG+GGG + Chr8:20296424-20296443 None:intergenic 35.0%
! AGAAGCAGTTAAGATTTGCT+TGG - Chr8:20299345-20299364 MsG0880043185.01.T01:intron 35.0%
! GATTAAGTTTGCAGTGGATT+GGG - Chr8:20300310-20300329 MsG0880043185.01.T01:intron 35.0%
! GTTTTTGTACGAGTCAACTT+TGG - Chr8:20295732-20295751 MsG0880043185.01.T01:intron 35.0%
! TGGATCCATTTGAAGTAATG+TGG + Chr8:20298849-20298868 None:intergenic 35.0%
! TTTTTGCTCCTTTTCAGCAA+TGG - Chr8:20299925-20299944 MsG0880043185.01.T01:intron 35.0%
!! AATGAGGATGATAATGGAGA+AGG + Chr8:20297896-20297915 None:intergenic 35.0%
!! ATACCTTACGCATTTTGGAA+GGG - Chr8:20299736-20299755 MsG0880043185.01.T01:intron 35.0%
!! ATTAAGTTTGCAGTGGATTG+GGG - Chr8:20300311-20300330 MsG0880043185.01.T01:intron 35.0%
!! CATTGAGATGGATTGTTGTT+GGG + Chr8:20298803-20298822 None:intergenic 35.0%
!! GTTTGAGTTGTATAAGGAGA+AGG + Chr8:20301314-20301333 None:intergenic 35.0%
!! TCATTGAGATGGATTGTTGT+TGG + Chr8:20298804-20298823 None:intergenic 35.0%
!!! CAACTTTTAAGGTTATACCC+TGG - Chr8:20299035-20299054 MsG0880043185.01.T01:intron 35.0%
!!! GGGTTTTGTTATGCAAACAT+TGG + Chr8:20296404-20296423 None:intergenic 35.0%
!!! TAGACATGTGCTCCTTTTTT+AGG + Chr8:20296186-20296205 None:intergenic 35.0%
AACCCTGAGATAGAGATAAG+AGG - Chr8:20298309-20298328 MsG0880043185.01.T01:intron 40.0%
AAGATCTCAAACCAACCACT+AGG + Chr8:20300658-20300677 None:intergenic 40.0%
AAGGATGAAGAGAGGTTTGT+GGG + Chr8:20297429-20297448 None:intergenic 40.0%
AATACGGCAAGTGAAGACAA+GGG - Chr8:20301367-20301386 MsG0880043185.01.T01:CDS 40.0%
AATACGGCAAGTGAAGACAA+GGG + Chr8:20301386-20301367 None:intergenic 40.0%
ACAAACCTCTCTTCATCCTT+AGG - Chr8:20297429-20297448 MsG0880043185.01.T01:CDS 40.0%
ACCACTGAAATTGACACTAG+AGG + Chr8:20300716-20300735 None:intergenic 40.0%
AGGGAGCCAAGTTGTTTATT+TGG - Chr8:20297090-20297109 MsG0880043185.01.T01:CDS 40.0%
AGGGATGTGTTCACAATATG+GGG - Chr8:20299005-20299024 MsG0880043185.01.T01:intron 40.0%
ATGCATCCGAAGAACATGAT+TGG - Chr8:20299803-20299822 MsG0880043185.01.T01:intron 40.0%
ATTATTGGGGGAATCTGAGA+GGG - Chr8:20298230-20298249 MsG0880043185.01.T01:intron 40.0%
CAACCCCAAATTGGTTATTG+TGG + Chr8:20300634-20300653 None:intergenic 40.0%
CAAGGGATGTGTTCACAATA+TGG - Chr8:20299003-20299022 MsG0880043185.01.T01:intron 40.0%
CAATTAGTACCATTGGGGTT+AGG - Chr8:20297661-20297680 MsG0880043185.01.T01:intron 40.0%
CACTATTATCCTAACCCCAA+TGG + Chr8:20297673-20297692 None:intergenic 40.0%
CAGGCACAAAAAATTGGAGA+AGG - Chr8:20301062-20301081 MsG0880043185.01.T01:intron 40.0%
CCACTGAAATTGACACTAGA+GGG + Chr8:20300715-20300734 None:intergenic 40.0%
CTTAAACCATGGGAGAAAAC+AGG - Chr8:20298876-20298895 MsG0880043185.01.T01:intron 40.0%
GAACCTCTTATCTCTATCTC+AGG + Chr8:20298315-20298334 None:intergenic 40.0%
GAAGTAATGTGGACATGATG+AGG + Chr8:20298838-20298857 None:intergenic 40.0%
GACGAATGGGTAAAACACTA+CGG - Chr8:20296153-20296172 MsG0880043185.01.T01:CDS 40.0%
GACTTACAAGGTCAATCCAA+TGG + Chr8:20294869-20294888 None:intergenic 40.0%
GAGCCAAGTTGTTTATTTGG+CGG - Chr8:20297093-20297112 MsG0880043185.01.T01:CDS 40.0%
GCACAAAAAATTGGAGAAGG+AGG - Chr8:20301065-20301084 MsG0880043185.01.T01:intron 40.0%
GGAAGAACACATATGTTGTG+TGG - Chr8:20298493-20298512 MsG0880043185.01.T01:intron 40.0%
GTAATGTATTATGGGACGGA+GGG + Chr8:20296593-20296612 None:intergenic 40.0%
GTATGTAGGAACAAAGTGCA+TGG + Chr8:20300878-20300897 None:intergenic 40.0%
GTGTAGAGGAAAACATCATG+AGG - Chr8:20296331-20296350 MsG0880043185.01.T01:CDS 40.0%
TAAGGATGAAGAGAGGTTTG+TGG + Chr8:20297430-20297449 None:intergenic 40.0%
TAATACGGCAAGTGAAGACA+AGG - Chr8:20301366-20301385 MsG0880043185.01.T01:CDS 40.0%
TAATACGGCAAGTGAAGACA+AGG + Chr8:20301385-20301366 None:intergenic 40.0%
TAATCGCAACCATGACGAAA+TGG + Chr8:20298406-20298425 None:intergenic 40.0%
TAATGTGGACATGATGAGGA+TGG + Chr8:20298834-20298853 None:intergenic 40.0%
TATTATTGGGGGAATCTGAG+AGG - Chr8:20298229-20298248 MsG0880043185.01.T01:intron 40.0%
TCTTTATGGTGATATCACGG+AGG + Chr8:20297633-20297652 None:intergenic 40.0%
TGACAATTGAGGGAAAGGAA+AGG + Chr8:20298116-20298135 None:intergenic 40.0%
TGGTGCAAGGAAACATTTCA+TGG - Chr8:20301241-20301260 MsG0880043185.01.T01:intron 40.0%
TGTAATGTATTATGGGACGG+AGG + Chr8:20296594-20296613 None:intergenic 40.0%
TGTGTGCTTGGCACATATTT+AGG - Chr8:20296983-20297002 MsG0880043185.01.T01:CDS 40.0%
TGTTGCAAGCTCTTTCATCT+TGG - Chr8:20297921-20297940 MsG0880043185.01.T01:intron 40.0%
TTACTCGAAACAAAAGCGAG+AGG + Chr8:20299869-20299888 None:intergenic 40.0%
TTGAAGTTAGGATGTGTGCT+TGG - Chr8:20296971-20296990 MsG0880043185.01.T01:CDS 40.0%
TTTCCCTTCCAAAATGCGTA+AGG + Chr8:20299742-20299761 None:intergenic 40.0%
TTTCTAATGGGAGATACTGC+TGG + Chr8:20299766-20299785 None:intergenic 40.0%
! ACATTTTAGGCTTGTGGTTG+TGG - Chr8:20298938-20298957 MsG0880043185.01.T01:intron 40.0%
! ACTGCTCCTTCTGGTATTTT+TGG + Chr8:20301185-20301204 None:intergenic 40.0%
! AGATGGACAAGTTGAGTTTG+AGG + Chr8:20298775-20298794 None:intergenic 40.0%
! AGTCATTTAAAATGGGACGG+AGG - Chr8:20296817-20296836 MsG0880043185.01.T01:intron 40.0%
! ATTGTTGTTGGGTAGGAAGA+TGG + Chr8:20298792-20298811 None:intergenic 40.0%
! CACAATAACCAATTTGGGGT+TGG - Chr8:20300632-20300651 MsG0880043185.01.T01:intron 40.0%
! CATGTCACATTTTAGGCTTG+TGG - Chr8:20298932-20298951 MsG0880043185.01.T01:intron 40.0%
! CCCATGGTTTAAGATCTTCA+TGG + Chr8:20298869-20298888 None:intergenic 40.0%
! GATGGTCGCGCTATTATTTT+AGG + Chr8:20295995-20296014 None:intergenic 40.0%
! GTCATTTAAAATGGGACGGA+GGG - Chr8:20296818-20296837 MsG0880043185.01.T01:intron 40.0%
! TGGCTCTATGAACATAGTCA+TGG + Chr8:20300210-20300229 None:intergenic 40.0%
! TTTTCCTGATTGGACCTTCT+GGG - Chr8:20299196-20299215 MsG0880043185.01.T01:intron 40.0%
! TTTTTCCTGATTGGACCTTC+TGG - Chr8:20299195-20299214 MsG0880043185.01.T01:intron 40.0%
!! ATTTTAGCACACCTTGTGCT+AGG - Chr8:20297482-20297501 MsG0880043185.01.T01:intron 40.0%
!! GGCCATGAGATTTTTCAATC+TGG + Chr8:20298267-20298286 None:intergenic 40.0%
!! TTGCGTAATGTTGTTTCCCA+TGG + Chr8:20299676-20299695 None:intergenic 40.0%
!! TTGTTTCCCATGGTCTTATG+TGG + Chr8:20299666-20299685 None:intergenic 40.0%
!!! ATAGTTTTGTTCTGGGAGTG+TGG - Chr8:20300496-20300515 MsG0880043185.01.T01:intron 40.0%
!!! CACATGTTTTTGGCACTGAT+AGG + Chr8:20300284-20300303 None:intergenic 40.0%
ACATTTCATGGTTGAGGGCA+TGG - Chr8:20301253-20301272 MsG0880043185.01.T01:intron 45.0%
ATAGGCCAATAGTGGTGCAA+AGG + Chr8:20300266-20300285 None:intergenic 45.0%
CAAATCTCAACTGCTCCTTC+TGG + Chr8:20301194-20301213 None:intergenic 45.0%
CCAAGTTGTTTATTTGGCGG+TGG - Chr8:20297096-20297115 MsG0880043185.01.T01:CDS 45.0%
CCACCGCCAAATAAACAACT+TGG + Chr8:20297099-20297118 None:intergenic 45.0%
CCCTCTAGTGTCAATTTCAG+TGG - Chr8:20300712-20300731 MsG0880043185.01.T01:intron 45.0%
GAATCGAACTTGAGACCTCA+AGG + Chr8:20300552-20300571 None:intergenic 45.0%
GCAAAGACTCGACCAAAAGT+GGG + Chr8:20297348-20297367 None:intergenic 45.0%
GCAAAGCAGTAGATGTGTAG+AGG - Chr8:20296317-20296336 MsG0880043185.01.T01:CDS 45.0%
GTCTCAAGTTCGATTCTCTC+CGG - Chr8:20300556-20300575 MsG0880043185.01.T01:intron 45.0%
TCCTGTTGCCATTGCTGAAA+AGG + Chr8:20299936-20299955 None:intergenic 45.0%
TCTCACACACACTCACTTGT+TGG - Chr8:20295029-20295048 MsG0880043185.01.T01:CDS 45.0%
TGAGCTCCACATAAGACCAT+GGG - Chr8:20299657-20299676 MsG0880043185.01.T01:intron 45.0%
TGCAAAGACTCGACCAAAAG+TGG + Chr8:20297349-20297368 None:intergenic 45.0%
TGCATGGTTCAACCTCATTG+TGG + Chr8:20300862-20300881 None:intergenic 45.0%
TGCTACCTTTGCACCACTAT+TGG - Chr8:20300258-20300277 MsG0880043185.01.T01:intron 45.0%
TTTAGGCTTGTGGTTGTGGA+TGG - Chr8:20298942-20298961 MsG0880043185.01.T01:intron 45.0%
TTTATGCAGAAGGGGCAACA+TGG - Chr8:20300150-20300169 MsG0880043185.01.T01:intron 45.0%
TTTCCTGATTGGACCTTCTG+GGG - Chr8:20299197-20299216 MsG0880043185.01.T01:intron 45.0%
! AAGGTTTGAGGTACAAACCC+CGG + Chr8:20297122-20297141 None:intergenic 45.0%
! ATTCTCTCCGGTGCCAATTT+AGG - Chr8:20300568-20300587 MsG0880043185.01.T01:intron 45.0%
! CATGTCTATGGTGTTAGTCG+CGG - Chr8:20296198-20296217 MsG0880043185.01.T01:CDS 45.0%
! GTGATTCCTGTTTTCTCCCA+TGG + Chr8:20298885-20298904 None:intergenic 45.0%
! TCCTTTTCAGCAATGGCAAC+AGG - Chr8:20299932-20299951 MsG0880043185.01.T01:intron 45.0%
! TTAATGGGGCACCTACAAGT+GGG - Chr8:20300765-20300784 MsG0880043185.01.T01:intron 45.0%
! TTTAATGGGGCACCTACAAG+TGG - Chr8:20300764-20300783 MsG0880043185.01.T01:intron 45.0%
!! GAGATGGATTGTTGTTGGGT+AGG + Chr8:20298799-20298818 None:intergenic 45.0%
!! GTGGTATTGGTTTGGGATCT+GGG - Chr8:20300515-20300534 MsG0880043185.01.T01:intron 45.0%
!! TAAGGAGAAGGCATTGTGCA+TGG + Chr8:20301302-20301321 None:intergenic 45.0%
!! TGGGAGTGTGGTATTGGTTT+GGG - Chr8:20300508-20300527 MsG0880043185.01.T01:intron 45.0%
!! TGTGGTATTGGTTTGGGATC+TGG - Chr8:20300514-20300533 MsG0880043185.01.T01:intron 45.0%
!! TTGTTCTGGGAGTGTGGTAT+TGG - Chr8:20300502-20300521 MsG0880043185.01.T01:intron 45.0%
!! AAATTATTTATTTATTTAGA+AGG - Chr8:20300382-20300401 MsG0880043185.01.T01:intron 5.0%
!! TGAATTAATTTATTTATATT+AGG + Chr8:20295556-20295575 None:intergenic 5.0%
!!! TTTTTGTTTTTTTTTTTTTT+TGG + Chr8:20298346-20298365 None:intergenic 5.0%
AGTATGGCATGTTCCTTGCG+TGG - Chr8:20301221-20301240 MsG0880043185.01.T01:intron 50.0%
AGTCCATACAAAGCCCTGCT+CGG - Chr8:20300738-20300757 MsG0880043185.01.T01:intron 50.0%
ATCTCATGGCCAACAGAGAG+TGG - Chr8:20298276-20298295 MsG0880043185.01.T01:intron 50.0%
ATGTTTCCTTGCACCACGCA+AGG + Chr8:20301237-20301256 None:intergenic 50.0%
CAAAAGGTCCTCCTAGCACA+AGG + Chr8:20297496-20297515 None:intergenic 50.0%
CTGAGCTCCACATAAGACCA+TGG - Chr8:20299656-20299675 MsG0880043185.01.T01:intron 50.0%
GAAGCTTTACCAACCCCAGA+AGG + Chr8:20299213-20299232 None:intergenic 50.0%
GGGTAAAACACTACGGCGAT+CGG - Chr8:20296160-20296179 MsG0880043185.01.T01:CDS 50.0%
GTTGTTTATTTGGCGGTGGC+CGG - Chr8:20297100-20297119 MsG0880043185.01.T01:CDS 50.0%
TACGGCGATCGGCCTAAAAA+AGG - Chr8:20296171-20296190 MsG0880043185.01.T01:CDS 50.0%
TAGCCCACCTAAATTGGCAC+CGG + Chr8:20300578-20300597 None:intergenic 50.0%
TCGAACTTGAGACCTCAAGG+AGG + Chr8:20300549-20300568 None:intergenic 50.0%
TCTCATGGCCAACAGAGAGT+GGG - Chr8:20298277-20298296 MsG0880043185.01.T01:intron 50.0%
TTAGCACACCTTGTGCTAGG+AGG - Chr8:20297485-20297504 MsG0880043185.01.T01:intron 50.0%
TTGTTTATTTGGCGGTGGCC+GGG - Chr8:20297101-20297120 MsG0880043185.01.T01:CDS 50.0%
! AGCTATGATGGCGAGACGAA+TGG - Chr8:20296139-20296158 MsG0880043185.01.T01:intron 50.0%
! GCTAGGAGGACCTTTTGTTG+TGG - Chr8:20297499-20297518 MsG0880043185.01.T01:intron 50.0%
! GCTATGATGGCGAGACGAAT+GGG - Chr8:20296140-20296159 MsG0880043185.01.T01:intron 50.0%
! GGTGGAGGTGACACATTTTC+TGG + Chr8:20299134-20299153 None:intergenic 50.0%
! GTGCATGGAGGTGTATCACT+TGG + Chr8:20301287-20301306 None:intergenic 50.0%
! TCTCCGGTGCCAATTTAGGT+GGG - Chr8:20300572-20300591 MsG0880043185.01.T01:intron 50.0%
!! CTGGGAGTGTGGTATTGGTT+TGG - Chr8:20300507-20300526 MsG0880043185.01.T01:intron 50.0%
!! GGAGTTTGGTGTTGCAGCAA+TGG - Chr8:20296286-20296305 MsG0880043185.01.T01:intron 50.0%
!! TGGCACTGATAGGCCAATAG+TGG + Chr8:20300274-20300293 None:intergenic 50.0%
CAACCCCAGAAGGTCCAATC+AGG + Chr8:20299203-20299222 None:intergenic 55.0%
CATGTTCCTTGCGTGGTGCA+AGG - Chr8:20301228-20301247 MsG0880043185.01.T01:intron 55.0%
CCACTAGGCCAACCCCAAAT+TGG + Chr8:20300643-20300662 None:intergenic 55.0%
CCCCATTAAAAGCCCGAGCA+GGG + Chr8:20300754-20300773 None:intergenic 55.0%
CTCATGGCCAACAGAGAGTG+GGG - Chr8:20298278-20298297 MsG0880043185.01.T01:intron 55.0%
GTCCATACAAAGCCCTGCTC+GGG - Chr8:20300739-20300758 MsG0880043185.01.T01:intron 55.0%
TGTTTATTTGGCGGTGGCCG+GGG - Chr8:20297102-20297121 MsG0880043185.01.T01:CDS 55.0%
! AGATGGCTGGAGCCCACTTT+TGG - Chr8:20297333-20297352 MsG0880043185.01.T01:CDS 55.0%
! AGCCCTGCTCGGGCTTTTAA+TGG - Chr8:20300749-20300768 MsG0880043185.01.T01:intron 55.0%
! CCCTGCTCGGGCTTTTAATG+GGG - Chr8:20300751-20300770 MsG0880043185.01.T01:intron 55.0%
! CTCTCCGGTGCCAATTTAGG+TGG - Chr8:20300571-20300590 MsG0880043185.01.T01:intron 55.0%
! GCCCTGCTCGGGCTTTTAAT+GGG - Chr8:20300750-20300769 MsG0880043185.01.T01:intron 55.0%
! TATGGTGTTAGTCGCGGCGT+TGG - Chr8:20296204-20296223 MsG0880043185.01.T01:intron 55.0%
!! CCAATTTGGGGTTGGCCTAG+TGG - Chr8:20300640-20300659 MsG0880043185.01.T01:intron 55.0%
!! CTGATTGGACCTTCTGGGGT+TGG - Chr8:20299201-20299220 MsG0880043185.01.T01:intron 55.0%
!! GGAGAAGGCATTGTGCATGG+AGG + Chr8:20301299-20301318 None:intergenic 55.0%
!! TTTGGGGTTGGCCTAGTGGT+TGG - Chr8:20300644-20300663 MsG0880043185.01.T01:intron 55.0%
CAATCCCACCGCCCACTTGT+AGG + Chr8:20300779-20300798 None:intergenic 60.0%
CTACAAGTGGGCGGTGGGAT+TGG - Chr8:20300777-20300796 MsG0880043185.01.T01:intron 60.0%
GCCAACAGAGAGTGGGGATC+GGG - Chr8:20298284-20298303 MsG0880043185.01.T01:intron 60.0%
GCCCCATTAAAAGCCCGAGC+AGG + Chr8:20300755-20300774 None:intergenic 60.0%
GGCCAACAGAGAGTGGGGAT+CGG - Chr8:20298283-20298302 MsG0880043185.01.T01:intron 60.0%
! AGCCCGAGCAGGGCTTTGTA+TGG + Chr8:20300744-20300763 None:intergenic 60.0%
! ATGGGGCACCTACAAGTGGG+CGG - Chr8:20300768-20300787 MsG0880043185.01.T01:intron 60.0%
! GGCGGTGGGATTGGTACACT+CGG - Chr8:20300786-20300805 MsG0880043185.01.T01:intron 60.0%
! TGGGAGTGTGCTCCTCCTTG+AGG - Chr8:20300534-20300553 MsG0880043185.01.T01:intron 60.0%
GCCCGATCCCCACTCTCTGT+TGG + Chr8:20298288-20298307 None:intergenic 65.0%
GGCACCTACAAGTGGGCGGT+GGG - Chr8:20300772-20300791 MsG0880043185.01.T01:intron 65.0%
!! CGGCGTTGGCCGTCGATTGA+AGG - Chr8:20296218-20296237 MsG0880043185.01.T01:intron 65.0%
GGGCACCTACAAGTGGGCGG+TGG - Chr8:20300771-20300790 MsG0880043185.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 20294750 20301409 20294750 ID=MsG0880043185.01;Name=MsG0880043185.01
Chr8 mRNA 20294750 20301409 20294750 ID=MsG0880043185.01.T01;Parent=MsG0880043185.01;Name=MsG0880043185.01.T01;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|0.2|0.5|6|0|503
Chr8 exon 20301278 20301409 20301278 ID=MsG0880043185.01.T01:exon:5443;Parent=MsG0880043185.01.T01
Chr8 exon 20296937 20297481 20296937 ID=MsG0880043185.01.T01:exon:5442;Parent=MsG0880043185.01.T01
Chr8 exon 20296313 20296526 20296313 ID=MsG0880043185.01.T01:exon:5441;Parent=MsG0880043185.01.T01
Chr8 exon 20296153 20296217 20296153 ID=MsG0880043185.01.T01:exon:5440;Parent=MsG0880043185.01.T01
Chr8 exon 20295807 20296017 20295807 ID=MsG0880043185.01.T01:exon:5439;Parent=MsG0880043185.01.T01
Chr8 exon 20294750 20295094 20294750 ID=MsG0880043185.01.T01:exon:5438;Parent=MsG0880043185.01.T01
Chr8 CDS 20301278 20301409 20301278 ID=MsG0880043185.01.T01:cds;Parent=MsG0880043185.01.T01
Chr8 CDS 20296937 20297481 20296937 ID=MsG0880043185.01.T01:cds;Parent=MsG0880043185.01.T01
Chr8 CDS 20296313 20296526 20296313 ID=MsG0880043185.01.T01:cds;Parent=MsG0880043185.01.T01
Chr8 CDS 20296153 20296217 20296153 ID=MsG0880043185.01.T01:cds;Parent=MsG0880043185.01.T01
Chr8 CDS 20295807 20296017 20295807 ID=MsG0880043185.01.T01:cds;Parent=MsG0880043185.01.T01
Chr8 CDS 20294750 20295094 20294750 ID=MsG0880043185.01.T01:cds;Parent=MsG0880043185.01.T01
Gene Sequence

>MsG0880043185.01.T01

ATGGCCAATAGTCAAAGCTTTCATCAAGCATACAACAAAACAAAAAGATGGGTTTCAACTTCAGCCTTATTATCCTTCATCTTCTTGTTTTTCTTTGCTCTAAGTACTTTGATCATCCATTGGATTGACCTTTCCAAGGTAACAAGCACTACTATTTTCAAGACAATAGAAGTCTTCAACAACATTAAACAACAACCTCAATTCCCACTTGATTGCAACAATGAAACCTCAAACTCAACTTGTCCATCTTCCTACCCAACAACAATCCATCTCAATGATGATTCACCATCCTCATCATGTCCACATTACTTCAAATGGATCCATGAAGATCTTAAACCATGGGAGAAAACAGGAATCACAAGAGAAATGGTTGAAAGAGGAAAAAACATGTCACATTTTAGGCTTGTGGTTGTGGATGGAAAAGCATACATAGATAAATATGCAAAATCTTATCAAACAAGGGATGTGTTCACAATATGGGGAATTTTACAACTTTTAAGGTTATACCCTGGAAAAATACCTGATTTAGAGCTAATGTTTCAATGTGGTGATAAAAATGTGGTGGACAAGAAAAAATTTCAAGGGCCAGAAAATGTGTCACCTCCACCTATTTTTCATTATTGTGGAGATGAAGATACAATTGACATTGTTTTTCCTGATTGGACCTTCTGGGGTTGTTTACATTTTTTTCTTTTTAGGGCTGAGCTCCACATAAGACCATGGGAAACAACATTACGCAATATACAAGAAGGCAACAAGAATGTCAAATGGAAGGATAGAATACCTTACGCATTTTGGAAGGGAAATCCAGCAGTATCTCCCATTAGAAAAGAACTCGAAAAGTGTAATGCATCCGAAGAACATGATTGGAATGCTCGAATATATGACATCCAATGGCAACAGGAGAGATCAAAAAATTTCCAAGACACAAAATTGGAAAATCAATGTACCTATAGGTACAAGATTTATGCAGAAGGGGCAACATGGTCTGTGAGTGAAAAGTACATAATAGCATGTGACTCCATGACTATGTTCATAGAGCCAAAGTACTATGATTTCTTTACAAGAAGCTTGCTACCTTTGCACCACTATTGGCCTATCAGTGCCAAAAACATGTGTGAAGAGATTAAGTTTGCAGTGGATTGGGGAAATGCTCACCTTGACAAAGCACAAAAAATTGGAGAAGGAGGAACCAACTACATAATAGATAATTTGAAGATGAAGTTTGTTTATGATTACATGTTTCATCTATTAAATAGTTATGCTAAGCTTTTGAGATTCAAACCAAAAATACCAGAAGGAGCAGTTGAGATTTGTTCTGAAAGTATGGCATGTTCCTTGCGTGGTGCAAGGAAACATTTCATGGTTGAGGGCATGGTGATGTCACCAAGTGATACACCTCCATGCACAATGCCTTCTCCTTATACAACTCAAACTCTTCATCAATTTCTACAAGAAAAGGAGAATTTAATACGGCAAGTGAAGACAAGGGCCATGAATAAAGAGTTATAG

Protein sequence

>MsG0880043185.01.T01

MANSQSFHQAYNKTKRWVSTSALLSFIFLFFFALSTLIIHWIDLSKVTSTTIFKTIEVFNNIKQQPQFPLDCNNETSNSTCPSSYPTTIHLNDDSPSSSCPHYFKWIHEDLKPWEKTGITREMVERGKNMSHFRLVVVDGKAYIDKYAKSYQTRDVFTIWGILQLLRLYPGKIPDLELMFQCGDKNVVDKKKFQGPENVSPPPIFHYCGDEDTIDIVFPDWTFWGCLHFFLFRAELHIRPWETTLRNIQEGNKNVKWKDRIPYAFWKGNPAVSPIRKELEKCNASEEHDWNARIYDIQWQQERSKNFQDTKLENQCTYRYKIYAEGATWSVSEKYIIACDSMTMFIEPKYYDFFTRSLLPLHHYWPISAKNMCEEIKFAVDWGNAHLDKAQKIGEGGTNYIIDNLKMKFVYDYMFHLLNSYAKLLRFKPKIPEGAVEICSESMACSLRGARKHFMVEGMVMSPSDTPPCTMPSPYTTQTLHQFLQEKENLIRQVKTRAMNKEL*