Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027891.01.T01 | XP_013454073.1 | 80.899 | 89 | 12 | 1 | 1 | 89 | 1 | 84 | 1.48E-14 | 78.2 |
| MsG0580027891.01.T02 | XP_013454073.1 | 80.899 | 89 | 12 | 1 | 1 | 89 | 1 | 84 | 1.48E-14 | 78.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027891.01.T01 | A0A072UE90 | 80.899 | 89 | 12 | 1 | 1 | 89 | 1 | 84 | 7.07e-15 | 78.2 |
| MsG0580027891.01.T02 | A0A072UE90 | 80.899 | 89 | 12 | 1 | 1 | 89 | 1 | 84 | 7.07e-15 | 78.2 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048058.01 | MsG0580027891.01 | 0.811105 | 8.268915e-51 | 5.073722e-48 |
| MsG0080048383.01 | MsG0580027891.01 | 0.816446 | 5.505870e-52 | 3.901989e-49 |
| MsG0080048815.01 | MsG0580027891.01 | 0.803733 | 3.027636e-49 | 1.533058e-46 |
| MsG0180000091.01 | MsG0580027891.01 | 0.800813 | 1.208361e-48 | 5.680094e-46 |
| MsG0180000101.01 | MsG0580027891.01 | 0.809621 | 1.728789e-50 | 1.020046e-47 |
| MsG0180000144.01 | MsG0580027891.01 | 0.844127 | 9.164816e-59 | 1.465243e-55 |
| MsG0180000176.01 | MsG0580027891.01 | 0.815950 | 7.108846e-52 | 4.970323e-49 |
| MsG0180000235.01 | MsG0580027891.01 | 0.850160 | 2.032116e-60 | 3.944529e-57 |
| MsG0180000295.01 | MsG0580027891.01 | 0.800270 | 1.559299e-48 | 7.229644e-46 |
| MsG0180000475.01 | MsG0580027891.01 | 0.815485 | 9.022644e-52 | 6.229236e-49 |
| MsG0180000555.01 | MsG0580027891.01 | 0.849679 | 2.769744e-60 | 5.292258e-57 |
| MsG0180000585.01 | MsG0580027891.01 | 0.806427 | 8.269955e-50 | 4.487458e-47 |
| MsG0180000680.01 | MsG0580027891.01 | 0.839253 | 1.769604e-57 | 2.429840e-54 |
| MsG0180000702.01 | MsG0580027891.01 | 0.810619 | 1.053191e-50 | 6.379387e-48 |
| MsG0180000703.01 | MsG0580027891.01 | 0.825969 | 3.508356e-54 | 3.246673e-51 |
| MsG0180000741.01 | MsG0580027891.01 | 0.847310 | 1.253756e-59 | 2.219052e-56 |
| MsG0180000777.01 | MsG0580027891.01 | 0.805430 | 1.340074e-49 | 7.088222e-47 |
| MsG0180000797.01 | MsG0580027891.01 | 0.806818 | 6.837723e-50 | 3.747810e-47 |
| MsG0180000836.01 | MsG0580027891.01 | 0.823154 | 1.613385e-53 | 1.378101e-50 |
| MsG0180000855.01 | MsG0580027891.01 | 0.805306 | 1.422920e-49 | 7.502316e-47 |
| MsG0180001002.01 | MsG0580027891.01 | 0.812089 | 5.053360e-51 | 3.182830e-48 |
| MsG0180001173.01 | MsG0580027891.01 | 0.828324 | 9.575952e-55 | 9.486208e-52 |
| MsG0180001311.01 | MsG0580027891.01 | 0.805648 | 1.206080e-49 | 6.415384e-47 |
| MsG0180001312.01 | MsG0580027891.01 | 0.817238 | 3.656930e-52 | 2.648602e-49 |
| MsG0180001315.01 | MsG0580027891.01 | 0.842530 | 2.444844e-58 | 3.717758e-55 |
| MsG0180001570.01 | MsG0580027891.01 | 0.807408 | 5.130197e-50 | 2.855258e-47 |
| MsG0180001599.01 | MsG0580027891.01 | 0.804831 | 1.788357e-49 | 9.315379e-47 |
| MsG0180001662.01 | MsG0580027891.01 | 0.818047 | 2.403444e-52 | 1.779693e-49 |
| MsG0180001922.01 | MsG0580027891.01 | 0.816792 | 4.607613e-52 | 3.296609e-49 |
| MsG0180002071.01 | MsG0580027891.01 | 0.813884 | 2.041882e-51 | 1.349658e-48 |
| MsG0180002664.01 | MsG0580027891.01 | 0.819941 | 8.915576e-53 | 6.957987e-50 |
| MsG0180002709.01 | MsG0580027891.01 | 0.809799 | 1.583026e-50 | 9.384054e-48 |
| MsG0180002952.01 | MsG0580027891.01 | 0.801242 | 9.873629e-49 | 4.692222e-46 |
| MsG0180002955.01 | MsG0580027891.01 | 0.827604 | 1.427235e-54 | 1.384385e-51 |
| MsG0180003031.01 | MsG0580027891.01 | 0.820409 | 6.965945e-53 | 5.507584e-50 |
| MsG0180003190.01 | MsG0580027891.01 | 0.812177 | 4.833910e-51 | 3.051943e-48 |
| MsG0180003303.01 | MsG0580027891.01 | 0.842208 | 2.974847e-58 | 4.477815e-55 |
| MsG0180003304.01 | MsG0580027891.01 | 0.812155 | 4.887995e-51 | 3.084297e-48 |
| MsG0180003357.01 | MsG0580027891.01 | 0.802014 | 6.859952e-49 | 3.324191e-46 |
| MsG0180003567.01 | MsG0580027891.01 | 0.814940 | 1.192527e-51 | 8.110606e-49 |
| MsG0180003627.01 | MsG0580027891.01 | 0.806497 | 7.993380e-50 | 4.345092e-47 |
| MsG0180003744.01 | MsG0580027891.01 | 0.837484 | 5.057487e-57 | 6.579202e-54 |
| MsG0180003807.01 | MsG0580027891.01 | 0.838931 | 2.145007e-57 | 2.916493e-54 |
| MsG0180003810.01 | MsG0580027891.01 | 0.853107 | 2.973503e-61 | 6.353026e-58 |
| MsG0180003932.01 | MsG0580027891.01 | 0.802069 | 6.682634e-49 | 3.242880e-46 |
| MsG0180003977.01 | MsG0580027891.01 | 0.811590 | 6.488014e-51 | 4.032115e-48 |
| MsG0180004016.01 | MsG0580027891.01 | 0.823216 | 1.560644e-53 | 1.335353e-50 |
| MsG0180004252.01 | MsG0580027891.01 | 0.809688 | 1.672506e-50 | 9.885407e-48 |
| MsG0180004294.01 | MsG0580027891.01 | 0.805342 | 1.397844e-49 | 7.377131e-47 |
| MsG0180004331.01 | MsG0580027891.01 | 0.817553 | 3.107135e-52 | 2.269899e-49 |
| MsG0180004372.01 | MsG0580027891.01 | 0.824461 | 7.970745e-54 | 7.064360e-51 |
| MsG0180004437.01 | MsG0580027891.01 | 0.810550 | 1.090478e-50 | 6.592597e-48 |
| MsG0180004449.01 | MsG0580027891.01 | 0.820398 | 7.005420e-53 | 5.537223e-50 |
| MsG0180004465.01 | MsG0580027891.01 | 0.820392 | 7.028911e-53 | 5.554919e-50 |
| MsG0180004598.01 | MsG0580027891.01 | 0.852435 | 4.624211e-61 | 9.662056e-58 |
| MsG0180004645.01 | MsG0580027891.01 | 0.819277 | 1.263594e-52 | 9.679996e-50 |
| MsG0180004689.01 | MsG0580027891.01 | 0.800254 | 1.570835e-48 | 7.280248e-46 |
| MsG0180004725.01 | MsG0580027891.01 | 0.814468 | 1.517107e-51 | 1.018857e-48 |
| MsG0180004767.01 | MsG0580027891.01 | 0.812675 | 3.763030e-51 | 2.407581e-48 |
| MsG0180004802.01 | MsG0580027891.01 | 0.804292 | 2.317394e-49 | 1.190373e-46 |
| MsG0180004943.01 | MsG0580027891.01 | 0.817608 | 3.019581e-52 | 2.209249e-49 |
| MsG0180005049.01 | MsG0580027891.01 | 0.807462 | 4.995125e-50 | 2.784044e-47 |
| MsG0180005185.01 | MsG0580027891.01 | 0.801729 | 7.848241e-49 | 3.775588e-46 |
| MsG0180005228.01 | MsG0580027891.01 | 0.822692 | 2.067170e-53 | 1.742828e-50 |
| MsG0180005234.01 | MsG0580027891.01 | 0.830526 | 2.794668e-55 | 2.951844e-52 |
| MsG0180005304.01 | MsG0580027891.01 | 0.833318 | 5.714293e-56 | 6.557464e-53 |
| MsG0180005398.01 | MsG0580027891.01 | 0.805047 | 1.612183e-49 | 8.444002e-47 |
| MsG0180005407.01 | MsG0580027891.01 | 0.807401 | 5.147615e-50 | 2.864439e-47 |
| MsG0180005443.01 | MsG0580027891.01 | 0.810297 | 1.236044e-50 | 7.422815e-48 |
| MsG0180005445.01 | MsG0580027891.01 | 0.858760 | 6.603455e-63 | 1.703743e-59 |
| MsG0180005451.01 | MsG0580027891.01 | 0.826755 | 2.279204e-54 | 2.156918e-51 |
| MsG0180005730.01 | MsG0580027891.01 | 0.805532 | 1.275517e-49 | 6.764321e-47 |
| MsG0180005765.01 | MsG0580027891.01 | 0.806993 | 6.279870e-50 | 3.457489e-47 |
| MsG0180005786.01 | MsG0580027891.01 | 0.864581 | 1.097135e-64 | 3.462331e-61 |
| MsG0180005787.01 | MsG0580027891.01 | 0.801525 | 8.641237e-49 | 4.135831e-46 |
| MsG0180005944.01 | MsG0580027891.01 | 0.820669 | 6.071481e-53 | 4.834500e-50 |
| MsG0180006050.01 | MsG0580027891.01 | 0.826051 | 3.352920e-54 | 3.110053e-51 |
| MsG0180006096.01 | MsG0580027891.01 | 0.813234 | 2.838319e-51 | 1.843116e-48 |
| MsG0180006098.01 | MsG0580027891.01 | 0.804576 | 2.022118e-49 | 1.046316e-46 |
| MsG0180006128.01 | MsG0580027891.01 | 0.809304 | 2.021178e-50 | 1.182486e-47 |
| MsG0180006155.01 | MsG0580027891.01 | 0.860379 | 2.151562e-63 | 5.869783e-60 |
| MsG0180006207.01 | MsG0580027891.01 | 0.808346 | 3.240312e-50 | 1.848342e-47 |
| MsG0280006305.01 | MsG0580027891.01 | 0.802732 | 4.878402e-49 | 2.407747e-46 |
| MsG0280006367.01 | MsG0580027891.01 | 0.830405 | 2.992133e-55 | 3.149366e-52 |
| MsG0280006368.01 | MsG0580027891.01 | 0.846975 | 1.548926e-59 | 2.712478e-56 |
| MsG0280010560.01 | MsG0580027891.01 | 0.829880 | 4.017425e-55 | 4.165532e-52 |
| MsG0280010599.01 | MsG0580027891.01 | 0.852991 | 3.209942e-61 | 6.831437e-58 |
| MsG0280010753.01 | MsG0580027891.01 | 0.833507 | 5.124466e-56 | 5.913757e-53 |
| MsG0280010816.01 | MsG0580027891.01 | 0.847646 | 1.013817e-59 | 1.814064e-56 |
| MsG0280010976.01 | MsG0580027891.01 | 0.831541 | 1.574814e-55 | 1.714320e-52 |
| MsG0280011043.01 | MsG0580027891.01 | 0.815613 | 8.451915e-52 | 5.855733e-49 |
| MsG0280011065.01 | MsG0580027891.01 | 0.804725 | 1.881678e-49 | 9.774885e-47 |
| MsG0280011201.01 | MsG0580027891.01 | 0.832750 | 7.909846e-56 | 8.923527e-53 |
| MsG0280011293.01 | MsG0580027891.01 | 0.804715 | 1.891050e-49 | 9.820582e-47 |
| MsG0280011334.01 | MsG0580027891.01 | 0.814627 | 1.399074e-51 | 9.435914e-49 |
| MsG0280011340.01 | MsG0580027891.01 | 0.824217 | 9.097400e-54 | 8.007342e-51 |
| MsG0280011371.01 | MsG0580027891.01 | 0.803704 | 3.070004e-49 | 1.553277e-46 |
| MsG0280011410.01 | MsG0580027891.01 | 0.805481 | 1.307410e-49 | 6.924562e-47 |
| MsG0380011669.01 | MsG0580027891.01 | 0.823896 | 1.082098e-53 | 9.438929e-51 |
| MsG0380011927.01 | MsG0580027891.01 | 0.800874 | 1.174539e-48 | 5.529950e-46 |
| MsG0380012020.01 | MsG0580027891.01 | 0.826630 | 2.441684e-54 | 2.302374e-51 |
| MsG0380012034.01 | MsG0580027891.01 | 0.805448 | 1.328736e-49 | 7.031416e-47 |
| MsG0380012057.01 | MsG0580027891.01 | 0.809774 | 1.602523e-50 | 9.493643e-48 |
| MsG0380012460.01 | MsG0580027891.01 | 0.812781 | 3.566122e-51 | 2.287876e-48 |
| MsG0380013176.01 | MsG0580027891.01 | 0.836236 | 1.053504e-56 | 1.319809e-53 |
| MsG0380014489.01 | MsG0580027891.01 | 0.837088 | 6.387962e-57 | 8.208758e-54 |
| MsG0380014576.01 | MsG0580027891.01 | 0.814163 | 1.772173e-51 | 1.180251e-48 |
| MsG0380014701.01 | MsG0580027891.01 | 0.811206 | 7.862434e-51 | 4.837193e-48 |
| MsG0480018460.01 | MsG0580027891.01 | 0.800697 | 1.276463e-48 | 5.982525e-46 |
| MsG0480018462.01 | MsG0580027891.01 | 0.808350 | 3.233291e-50 | 1.844541e-47 |
| MsG0480018479.01 | MsG0580027891.01 | 0.837905 | 3.943869e-57 | 5.197106e-54 |
| MsG0480018640.01 | MsG0580027891.01 | 0.812615 | 3.878395e-51 | 2.477497e-48 |
| MsG0480018778.01 | MsG0580027891.01 | 0.809419 | 1.910302e-50 | 1.121066e-47 |
| MsG0480019289.01 | MsG0580027891.01 | 0.827768 | 1.303601e-54 | 1.270570e-51 |
| MsG0480019435.01 | MsG0580027891.01 | 0.805763 | 1.140963e-49 | 6.087288e-47 |
| MsG0480019493.01 | MsG0580027891.01 | 0.807343 | 5.293972e-50 | 2.941388e-47 |
| MsG0480019772.01 | MsG0580027891.01 | 0.842210 | 2.971416e-58 | 4.472888e-55 |
| MsG0480019970.01 | MsG0580027891.01 | 0.819992 | 8.677440e-53 | 6.781894e-50 |
| MsG0480020331.01 | MsG0580027891.01 | 0.819726 | 9.983159e-53 | 7.744460e-50 |
| MsG0480020447.01 | MsG0580027891.01 | 0.810019 | 1.419077e-50 | 8.461133e-48 |
| MsG0480020530.01 | MsG0580027891.01 | 0.821180 | 4.630946e-53 | 3.740812e-50 |
| MsG0480020540.01 | MsG0580027891.01 | 0.827964 | 1.169470e-54 | 1.146509e-51 |
| MsG0480020675.01 | MsG0580027891.01 | 0.802362 | 5.817388e-49 | 2.844272e-46 |
| MsG0480021204.01 | MsG0580027891.01 | 0.806088 | 9.747627e-50 | 5.243750e-47 |
| MsG0480021216.01 | MsG0580027891.01 | 0.810500 | 1.117855e-50 | 6.749241e-48 |
| MsG0480021409.01 | MsG0580027891.01 | 0.835126 | 2.011472e-56 | 2.436613e-53 |
| MsG0480021432.01 | MsG0580027891.01 | 0.822063 | 2.893874e-53 | 2.396211e-50 |
| MsG0480021492.01 | MsG0580027891.01 | 0.826924 | 2.076736e-54 | 1.975156e-51 |
| MsG0480021534.01 | MsG0580027891.01 | 0.800115 | 1.676409e-48 | 7.742074e-46 |
| MsG0480021592.01 | MsG0580027891.01 | 0.800761 | 1.238707e-48 | 5.814948e-46 |
| MsG0480021724.01 | MsG0580027891.01 | 0.809494 | 1.840470e-50 | 1.082186e-47 |
| MsG0480021819.01 | MsG0580027891.01 | 0.804081 | 2.563666e-49 | 1.309786e-46 |
| MsG0480021900.01 | MsG0580027891.01 | 0.834667 | 2.625516e-56 | 3.136915e-53 |
| MsG0480021998.01 | MsG0580027891.01 | 0.816065 | 6.701921e-52 | 4.700823e-49 |
| MsG0480022169.01 | MsG0580027891.01 | 0.830514 | 2.814194e-55 | 2.971388e-52 |
| MsG0480022181.01 | MsG0580027891.01 | 0.805093 | 1.576263e-49 | 8.265734e-47 |
| MsG0480022203.01 | MsG0580027891.01 | 0.816262 | 6.054109e-52 | 4.269477e-49 |
| MsG0480022261.01 | MsG0580027891.01 | 0.806878 | 6.643135e-50 | 3.646638e-47 |
| MsG0480022292.01 | MsG0580027891.01 | 0.813917 | 2.007514e-51 | 1.328114e-48 |
| MsG0480022318.01 | MsG0580027891.01 | 0.853819 | 1.856674e-61 | 4.063087e-58 |
| MsG0480022552.01 | MsG0580027891.01 | 0.805850 | 1.093876e-49 | 5.849153e-47 |
| MsG0480022678.01 | MsG0580027891.01 | 0.826568 | 2.525657e-54 | 2.377338e-51 |
| MsG0480022711.01 | MsG0580027891.01 | 0.800321 | 1.522394e-48 | 7.067868e-46 |
| MsG0480022786.01 | MsG0580027891.01 | 0.804445 | 2.153004e-49 | 1.110270e-46 |
| MsG0480023055.01 | MsG0580027891.01 | 0.837850 | 4.075026e-57 | 5.361295e-54 |
| MsG0480023143.01 | MsG0580027891.01 | 0.850535 | 1.595076e-60 | 3.134209e-57 |
| MsG0480023354.01 | MsG0580027891.01 | 0.823269 | 1.517310e-53 | 1.300178e-50 |
| MsG0480023412.01 | MsG0580027891.01 | 0.850865 | 1.288089e-60 | 2.558615e-57 |
| MsG0480023415.01 | MsG0580027891.01 | 0.836707 | 7.992030e-57 | 1.015324e-53 |
| MsG0480023554.01 | MsG0580027891.01 | 0.821654 | 3.599786e-53 | 2.946401e-50 |
| MsG0480023659.01 | MsG0580027891.01 | 0.804872 | 1.753138e-49 | 9.142175e-47 |
| MsG0480023670.01 | MsG0580027891.01 | 0.814149 | 1.784723e-51 | 1.188177e-48 |
| MsG0480023873.01 | MsG0580027891.01 | 0.838839 | 2.266038e-57 | 3.072353e-54 |
| MsG0480023932.01 | MsG0580027891.01 | 0.814096 | 1.833088e-51 | 1.218618e-48 |
| MsG0480024014.01 | MsG0580027891.01 | 0.807035 | 6.153731e-50 | 3.391772e-47 |
| MsG0580024197.01 | MsG0580027891.01 | 0.827534 | 1.483390e-54 | 1.436028e-51 |
| MsG0580024205.01 | MsG0580027891.01 | 0.800840 | 1.193010e-48 | 5.612115e-46 |
| MsG0580024251.01 | MsG0580027891.01 | 0.806080 | 9.786159e-50 | 5.263358e-47 |
| MsG0580024274.01 | MsG0580027891.01 | 0.827217 | 1.767808e-54 | 1.695703e-51 |
| MsG0580024304.01 | MsG0580027891.01 | 0.809782 | 1.595798e-50 | 9.455926e-48 |
| MsG0580024353.01 | MsG0580027891.01 | 0.806508 | 7.951836e-50 | 4.323733e-47 |
| MsG0580024374.01 | MsG0580027891.01 | 0.819034 | 1.435176e-52 | 1.092189e-49 |
| MsG0580024536.01 | MsG0580027891.01 | 0.863815 | 1.901691e-64 | 5.841414e-61 |
| MsG0580024581.01 | MsG0580027891.01 | 0.808115 | 3.629578e-50 | 2.057738e-47 |
| MsG0580024586.01 | MsG0580027891.01 | 0.800389 | 1.474950e-48 | 6.859205e-46 |
| MsG0580024682.01 | MsG0580027891.01 | 0.804776 | 1.836207e-49 | 9.550803e-47 |
| MsG0580024733.01 | MsG0580027891.01 | 0.805837 | 1.100781e-49 | 5.883882e-47 |
| MsG0580024781.01 | MsG0580027891.01 | 0.837485 | 5.055604e-57 | 6.576878e-54 |
| MsG0580024829.01 | MsG0580027891.01 | 0.800051 | 1.728071e-48 | 7.967559e-46 |
| MsG0580024960.01 | MsG0580027891.01 | 0.816061 | 6.714807e-52 | 4.709356e-49 |
| MsG0580024996.01 | MsG0580027891.01 | 0.800155 | 1.645490e-48 | 7.606762e-46 |
| MsG0580025008.01 | MsG0580027891.01 | 0.813156 | 2.952404e-51 | 1.913129e-48 |
| MsG0580025009.01 | MsG0580027891.01 | 0.809725 | 1.641382e-50 | 9.711298e-48 |
| MsG0580025025.01 | MsG0580027891.01 | 0.811138 | 8.132996e-51 | 4.994746e-48 |
| MsG0580025026.01 | MsG0580027891.01 | 0.805391 | 1.365204e-49 | 7.213927e-47 |
| MsG0580025184.01 | MsG0580027891.01 | 0.801134 | 1.039159e-48 | 4.924950e-46 |
| MsG0580025237.01 | MsG0580027891.01 | 0.817773 | 2.771356e-52 | 2.036917e-49 |
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| MsG0280007585.01 | MsG0580027891.01 | 0.846293 | 2.379015e-59 | 4.075362e-56 |
| MsG0280007645.01 | MsG0580027891.01 | 0.814987 | 1.164558e-51 | 7.930568e-49 |
| MsG0280007710.01 | MsG0580027891.01 | 0.861705 | 8.505325e-64 | 2.427600e-60 |
| MsG0280007745.01 | MsG0580027891.01 | 0.844759 | 6.196164e-59 | 1.010508e-55 |
| MsG0280007775.01 | MsG0580027891.01 | 0.818630 | 1.773377e-52 | 1.334435e-49 |
| MsG0280007984.01 | MsG0580027891.01 | 0.802041 | 6.770386e-49 | 3.283089e-46 |
| MsG0280008030.01 | MsG0580027891.01 | 0.810464 | 1.137671e-50 | 6.862457e-48 |
| MsG0280008100.01 | MsG0580027891.01 | 0.801547 | 8.552807e-49 | 4.095652e-46 |
| MsG0280008234.01 | MsG0580027891.01 | 0.824757 | 6.791157e-54 | 6.071394e-51 |
| MsG0280008295.01 | MsG0580027891.01 | 0.806926 | 6.487382e-50 | 3.565588e-47 |
| MsG0280008363.01 | MsG0580027891.01 | 0.844969 | 5.438053e-59 | 8.927948e-56 |
| MsG0280008380.01 | MsG0580027891.01 | 0.811759 | 5.961145e-51 | 3.721392e-48 |
| MsG0280008457.01 | MsG0580027891.01 | 0.803628 | 3.184076e-49 | 1.607885e-46 |
| MsG0280008502.01 | MsG0580027891.01 | 0.849599 | 2.916145e-60 | 5.556874e-57 |
| MsG0280008696.01 | MsG0580027891.01 | 0.807873 | 4.086675e-50 | 2.302028e-47 |
| MsG0280008765.01 | MsG0580027891.01 | 0.853501 | 2.292751e-61 | 4.964520e-58 |
| MsG0280008970.01 | MsG0580027891.01 | 0.804639 | 1.961735e-49 | 1.016712e-46 |
| MsG0280009024.01 | MsG0580027891.01 | 0.806645 | 7.439919e-50 | 4.059292e-47 |
| MsG0280009350.01 | MsG0580027891.01 | 0.817339 | 3.470551e-52 | 2.520615e-49 |
| MsG0280009441.01 | MsG0580027891.01 | 0.861423 | 1.036955e-63 | 2.933033e-60 |
| MsG0280009575.01 | MsG0580027891.01 | 0.836597 | 8.523918e-57 | 1.079286e-53 |
| MsG0280010109.01 | MsG0580027891.01 | 0.840166 | 1.023941e-57 | 1.446475e-54 |
| MsG0280010153.01 | MsG0580027891.01 | 0.809090 | 2.246916e-50 | 1.307046e-47 |
| MsG0280010158.01 | MsG0580027891.01 | 0.836113 | 1.131720e-56 | 1.412365e-53 |
| MsG0280010233.01 | MsG0580027891.01 | 0.816684 | 4.870042e-52 | 3.474055e-49 |
| MsG0280010411.01 | MsG0580027891.01 | 0.819809 | 9.558310e-53 | 7.432268e-50 |
| MsG0280010447.01 | MsG0580027891.01 | 0.823617 | 1.257878e-53 | 1.088599e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027891.01.T01 | MTR_5g064850 | 80.899 | 89 | 12 | 1 | 1 | 89 | 1 | 84 | 1.79e-18 | 78.2 |
| MsG0580027891.01.T01 | MTR_5g064850 | 80.899 | 89 | 12 | 1 | 1 | 89 | 1 | 84 | 1.97e-18 | 78.2 |
| MsG0580027891.01.T02 | MTR_5g064850 | 80.899 | 89 | 12 | 1 | 1 | 89 | 1 | 84 | 1.79e-18 | 78.2 |
| MsG0580027891.01.T02 | MTR_5g064850 | 80.899 | 89 | 12 | 1 | 1 | 89 | 1 | 84 | 1.97e-18 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 16 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACGCTACCTAGGGTTTAGA+AGG | 0.362705 | 5:-70493308 | None:intergenic |
| GGTTATCTGAATTGTATAAC+AGG | 0.416266 | 5:-70493274 | None:intergenic |
| GGCTGCAATGGGAAGGGAAA+CGG | 0.430404 | 5:-70493246 | None:intergenic |
| AACAGGAGCGTGGCTGCAAT+GGG | 0.468019 | 5:-70493257 | None:intergenic |
| AAGAATTGTTACCTCGTTGA+AGG | 0.468463 | 5:-70493519 | None:intergenic |
| TAACAGGAGCGTGGCTGCAA+TGG | 0.475171 | 5:-70493258 | None:intergenic |
| GGAGCGTGGCTGCAATGGGA+AGG | 0.532851 | 5:-70493253 | None:intergenic |
| TGAACGTTGGAACGCTACCT+AGG | 0.547135 | 5:-70493318 | None:intergenic |
| GAGCGTGGCTGCAATGGGAA+GGG | 0.555935 | 5:-70493252 | None:intergenic |
| CGCTACCTAGGGTTTAGAAG+GGG | 0.602023 | 5:-70493306 | None:intergenic |
| GAACGTTGGAACGCTACCTA+GGG | 0.609630 | 5:-70493317 | None:intergenic |
| ACGCTACCTAGGGTTTAGAA+GGG | 0.636366 | 5:-70493307 | None:intergenic |
| GCTACCTAGGGTTTAGAAGG+GGG | 0.656182 | 5:-70493305 | None:intergenic |
| TGATATCACAGTGTGAACGT+TGG | 0.682951 | 5:-70493331 | None:intergenic |
| TGAATTGTATAACAGGAGCG+TGG | 0.704680 | 5:-70493267 | None:intergenic |
| TGATGATATGTCCTTCAACG+AGG | 0.737794 | 5:+70493508 | MsG0580027891.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAGTTTAAGTTTAAAAAT+GGG | + | Chr5:70493422-70493441 | MsG0580027891.01.T01:exon | 15.0% |
| !!! | TTTGAGTTTAAGTTTAAAAA+TGG | + | Chr5:70493421-70493440 | MsG0580027891.01.T01:exon | 15.0% |
| !!! | TTTTTTTTTCGATTCTTAAC+AGG | + | Chr5:70493361-70493380 | MsG0580027891.01.T01:intron | 20.0% |
| ! | TAAGTTTAAAAATGGGTAGT+AGG | + | Chr5:70493429-70493448 | MsG0580027891.01.T01:exon | 25.0% |
| !! | TTTGTTGTGAATTCTGATTA+TGG | + | Chr5:70493588-70493607 | MsG0580027891.01.T01:intron | 25.0% |
| GGTTATCTGAATTGTATAAC+AGG | - | Chr5:70493277-70493296 | None:intergenic | 30.0% | |
| ! | ACAACTTGAGAAAGAGTATA+TGG | + | Chr5:70493760-70493779 | MsG0580027891.01.T01:CDS | 30.0% |
| !! | GATGATTTTTGTGATGATGT+AGG | + | Chr5:70493610-70493629 | MsG0580027891.01.T01:intron | 30.0% |
| AAGAATTGTTACCTCGTTGA+AGG | - | Chr5:70493522-70493541 | None:intergenic | 35.0% | |
| GCAAAAAAGTGACAGTGATT+TGG | + | Chr5:70493475-70493494 | MsG0580027891.01.T01:CDS | 35.0% | |
| TGGATGGAAAGATGATGAAA+TGG | + | Chr5:70493736-70493755 | MsG0580027891.01.T01:CDS | 35.0% | |
| ! | GTAGGTTAATGATGATAGTG+AGG | + | Chr5:70493628-70493647 | MsG0580027891.01.T01:intron | 35.0% |
| AGAAGAAGTTGAGGGACAAA+AGG | + | Chr5:70493709-70493728 | MsG0580027891.01.T01:CDS | 40.0% | |
| GATGAGGAAGAAGAAGTTGA+GGG | + | Chr5:70493701-70493720 | MsG0580027891.01.T01:CDS | 40.0% | |
| GTATATGGATCTTCATCACC+AGG | + | Chr5:70493775-70493794 | MsG0580027891.01.T01:CDS | 40.0% | |
| GTTTAGAAGGGGGAAAAAAG+CGG | - | Chr5:70493298-70493317 | None:intergenic | 40.0% | |
| TGAATTGTATAACAGGAGCG+TGG | - | Chr5:70493270-70493289 | None:intergenic | 40.0% | |
| TGATATCACAGTGTGAACGT+TGG | - | Chr5:70493334-70493353 | None:intergenic | 40.0% | |
| TGATGATATGTCCTTCAACG+AGG | + | Chr5:70493508-70493527 | MsG0580027891.01.T01:CDS | 40.0% | |
| ! | GGTTAATGATGATAGTGAGG+TGG | + | Chr5:70493631-70493650 | MsG0580027891.01.T01:intron | 40.0% |
| ! | TAATGATGATAGTGAGGTGG+AGG | + | Chr5:70493634-70493653 | MsG0580027891.01.T01:CDS | 40.0% |
| AACGCTACCTAGGGTTTAGA+AGG | - | Chr5:70493311-70493330 | None:intergenic | 45.0% | |
| ACGCTACCTAGGGTTTAGAA+GGG | - | Chr5:70493310-70493329 | None:intergenic | 45.0% | |
| AGGGACAAAAGGAAAGTGGA+TGG | + | Chr5:70493720-70493739 | MsG0580027891.01.T01:CDS | 45.0% | |
| CGATGAGGAAGAAGAAGTTG+AGG | + | Chr5:70493700-70493719 | MsG0580027891.01.T01:CDS | 45.0% | |
| GAGGAAGAGGAAGAAGATGA+TGG | + | Chr5:70493662-70493681 | MsG0580027891.01.T01:CDS | 45.0% | |
| GTTGAGGGACAAAAGGAAAG+TGG | + | Chr5:70493716-70493735 | MsG0580027891.01.T01:CDS | 45.0% | |
| ! | TTTTCCCCCTTCTAAACCCT+AGG | + | Chr5:70493301-70493320 | MsG0580027891.01.T01:five_prime_UTR | 45.0% |
| !! | AGAAGATGATGGAGAGGATG+AGG | + | Chr5:70493673-70493692 | MsG0580027891.01.T01:CDS | 45.0% |
| !! | AGAGGAAGAAGATGATGGAG+AGG | + | Chr5:70493667-70493686 | MsG0580027891.01.T01:CDS | 45.0% |
| !! | GAAGATGATGGAGAGGATGA+GGG | + | Chr5:70493674-70493693 | MsG0580027891.01.T01:CDS | 45.0% |
| !! | AAATAAATAACAAAAAAAAT+TGG | - | Chr5:70493553-70493572 | None:intergenic | 5.0% |
| CGCTACCTAGGGTTTAGAAG+GGG | - | Chr5:70493309-70493328 | None:intergenic | 50.0% | |
| GAACGTTGGAACGCTACCTA+GGG | - | Chr5:70493320-70493339 | None:intergenic | 50.0% | |
| GCTACCTAGGGTTTAGAAGG+GGG | - | Chr5:70493308-70493327 | None:intergenic | 50.0% | |
| TGAACGTTGGAACGCTACCT+AGG | - | Chr5:70493321-70493340 | None:intergenic | 50.0% | |
| ! | TGATGATAGTGAGGTGGAGG+AGG | + | Chr5:70493637-70493656 | MsG0580027891.01.T01:CDS | 50.0% |
| AGAGGATGAGGGAAGCGATG+AGG | + | Chr5:70493685-70493704 | MsG0580027891.01.T01:CDS | 55.0% | |
| TAGTGAGGTGGAGGAGGAAG+AGG | + | Chr5:70493643-70493662 | MsG0580027891.01.T01:CDS | 55.0% | |
| ! | AACAGGAGCGTGGCTGCAAT+GGG | - | Chr5:70493260-70493279 | None:intergenic | 55.0% |
| ! | TAACAGGAGCGTGGCTGCAA+TGG | - | Chr5:70493261-70493280 | None:intergenic | 55.0% |
| GAGCGTGGCTGCAATGGGAA+GGG | - | Chr5:70493255-70493274 | None:intergenic | 60.0% | |
| GGTGGAGGAGGAAGAGGAAG+AGG | + | Chr5:70493649-70493668 | MsG0580027891.01.T01:CDS | 60.0% | |
| GGAGCGTGGCTGCAATGGGA+AGG | - | Chr5:70493256-70493275 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 70493249 | 70493811 | 70493249 | ID=MsG0580027891.01;Name=MsG0580027891.01 |
| Chr5 | mRNA | 70493260 | 70493811 | 70493260 | ID=MsG0580027891.01.T01;Parent=MsG0580027891.01;Name=MsG0580027891.01.T01;_AED=0.48;_eAED=0.48;_QI=144|1|0.66|1|0.5|0.33|3|0|89 |
| Chr5 | exon | 70493260 | 70493371 | 70493260 | ID=MsG0580027891.01.T01:exon:4777;Parent=MsG0580027891.01.T01 |
| Chr5 | exon | 70493408 | 70493529 | 70493408 | ID=MsG0580027891.01.T01:exon:4778;Parent=MsG0580027891.01.T01 |
| Chr5 | five_prime_UTR | 70493260 | 70493371 | 70493260 | ID=MsG0580027891.01.T01:five_prime_utr;Parent=MsG0580027891.01.T01 |
| Chr5 | five_prime_UTR | 70493408 | 70493439 | 70493408 | ID=MsG0580027891.01.T01:five_prime_utr;Parent=MsG0580027891.01.T01 |
| Chr5 | CDS | 70493440 | 70493529 | 70493440 | ID=MsG0580027891.01.T01:cds;Parent=MsG0580027891.01.T01 |
| Chr5 | CDS | 70493632 | 70493811 | 70493632 | ID=MsG0580027891.01.T01:cds;Parent=MsG0580027891.01.T01 |
| Chr5 | mRNA | 70493249 | 70493811 | 70493249 | ID=MsG0580027891.01.T02;Parent=MsG0580027891.01;Name=MsG0580027891.01.T02;_AED=0.48;_eAED=0.48;_QI=131|1|0.66|1|0.5|0.33|3|0|89 |
| Chr5 | exon | 70493249 | 70493322 | 70493249 | ID=MsG0580027891.01.T02:exon:4780;Parent=MsG0580027891.01.T02 |
| Chr5 | exon | 70493383 | 70493529 | 70493383 | ID=MsG0580027891.01.T02:exon:4781;Parent=MsG0580027891.01.T02 |
| Chr5 | five_prime_UTR | 70493249 | 70493322 | 70493249 | ID=MsG0580027891.01.T02:five_prime_utr;Parent=MsG0580027891.01.T02 |
| Chr5 | five_prime_UTR | 70493383 | 70493439 | 70493383 | ID=MsG0580027891.01.T02:five_prime_utr;Parent=MsG0580027891.01.T02 |
| Chr5 | CDS | 70493440 | 70493529 | 70493440 | ID=MsG0580027891.01.T02:cds;Parent=MsG0580027891.01.T02 |
| Chr5 | CDS | 70493632 | 70493811 | 70493632 | ID=MsG0580027891.01.T02:cds;Parent=MsG0580027891.01.T02 |
| Gene Sequence |
| Protein sequence |
