AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012413.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012413.01.T01 MTR_3g023510 93.413 334 22 0 19 352 32 365 0.0 643
MsG0380012413.01.T01 MTR_7g090780 50.000 94 47 0 21 114 34 127 1.52e-32 124
MsG0380012413.01.T01 MTR_7g090830 32.479 234 123 5 25 239 20 237 5.20e-32 122
MsG0380012413.01.T01 MTR_1g051750 45.045 111 60 1 20 130 20 129 6.13e-32 120
MsG0380012413.01.T01 MTR_7g090775 49.474 95 48 0 20 114 13 107 7.61e-32 121
MsG0380012413.01.T01 MTR_7g090800 39.474 114 62 1 21 134 34 140 1.47e-27 110
MsG0380012413.01.T01 MTR_7g090820 46.809 94 50 0 21 114 30 123 1.30e-26 108
MsG0380012413.01.T01 MTR_7g090860 44.681 94 52 0 21 114 35 128 1.30e-24 105
MsG0380012413.01.T01 MTR_7g090780 53.125 64 30 0 51 114 1 64 5.57e-21 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012413.01.T01 AT3G51940 50.000 102 50 1 23 123 35 136 7.68e-33 127
MsG0380012413.01.T01 AT3G51940 49.505 101 50 1 24 123 32 132 3.04e-32 125
MsG0380012413.01.T01 AT5G03990 42.982 114 63 1 25 138 41 152 4.22e-29 114
MsG0380012413.01.T01 AT5G03990 43.182 88 48 1 51 138 1 86 4.31e-19 85.5

Find 131 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATGTTCTCTTCATAATTA+TGG 0.116891 3:-16087269 MsG0380012413.01.T01:three_prime_UTR
ATCTTGTAGACTATCAATTT+TGG 0.153781 3:-16087290 MsG0380012413.01.T01:three_prime_UTR
TCTAATTCCTTTATCAGTTC+AGG 0.243635 3:+16088394 None:intergenic
CTTTGCTTGTATTGTAGTTT+TGG 0.244360 3:-16087227 MsG0380012413.01.T01:three_prime_UTR
CAGTGTAGTGGTTGGAATTC+TGG 0.264845 3:-16088061 MsG0380012413.01.T01:CDS
GGAGGGAGCAAAGTAGAAAA+AGG 0.265121 3:-16087691 MsG0380012413.01.T01:CDS
TTCTCTTGTTCTTCTTCATC+AGG 0.270571 3:+16088352 None:intergenic
TAGCCAAATTATTCGACTTC+TGG 0.287003 3:+16087984 None:intergenic
ACAAAGGATGGGGCAAAGTT+AGG 0.292779 3:-16088024 MsG0380012413.01.T01:CDS
GGCACGATGGAATACCATTA+TGG 0.292782 3:-16088651 MsG0380012413.01.T01:CDS
CCACCAGAAGTCGAATAATT+TGG 0.298762 3:-16087987 MsG0380012413.01.T01:CDS
TACAAGATCAAAACAAAATA+AGG 0.307307 3:+16087305 None:intergenic
CAATATTTCTTCTCCCATAA+TGG 0.315390 3:+16088637 None:intergenic
TGCCGGGATAACTGTTTATC+AGG 0.315432 3:-16087573 MsG0380012413.01.T01:three_prime_UTR
GATGTTCTCTTCATAATTAT+GGG 0.322428 3:-16087268 MsG0380012413.01.T01:three_prime_UTR
CAAGCGATTCACAGTTTAGA+AGG 0.328702 3:-16087841 MsG0380012413.01.T01:CDS
AGACATAATATAAGCTATAA+TGG 0.331976 3:-16087758 MsG0380012413.01.T01:CDS
TTTCTCCATCCTGTGTTCAT+TGG 0.339287 3:+16087914 None:intergenic
TTGTTCAGATGTTCAACTTT+GGG 0.344302 3:+16087185 None:intergenic
TATTGACCCTGAACTGATAA+AGG 0.344524 3:-16088401 MsG0380012413.01.T01:CDS
TCACAGTTTAGAAGGAATAA+TGG 0.346693 3:-16087833 MsG0380012413.01.T01:CDS
ATAATCAAACAGGTCATTAC+TGG 0.350633 3:-16087715 MsG0380012413.01.T01:CDS
GGCTAATAGTGGCAACTCTT+GGG 0.353935 3:-16087966 MsG0380012413.01.T01:CDS
TTTCGAACATGTTAGAGTTC+CGG 0.376410 3:-16088672 MsG0380012413.01.T01:intron
GTTTGATTATCATCCCTTTG+AGG 0.378597 3:+16087728 None:intergenic
TGGCTAATAGTGGCAACTCT+TGG 0.395476 3:-16087967 MsG0380012413.01.T01:CDS
GAGGAAAGGAATCACGTAAA+AGG 0.405018 3:-16090215 MsG0380012413.01.T01:CDS
CGGAAGATGGTTGCTATTTG+AGG 0.409095 3:-16087547 MsG0380012413.01.T01:three_prime_UTR
GCAAAGTTAGGGATAATTCT+TGG 0.411285 3:-16088012 MsG0380012413.01.T01:CDS
TATTAGAGCCTCCCCTCGTT+TGG 0.413740 3:+16087780 None:intergenic
GTACTCGATTGGAAGGATTC+AGG 0.417246 3:-16088544 MsG0380012413.01.T01:CDS
GTTGTTCAGATGTTCAACTT+TGG 0.420786 3:+16087184 None:intergenic
GATAACTGTTTATCAGGATT+CGG 0.424450 3:-16087567 MsG0380012413.01.T01:three_prime_UTR
CTAATTCCTTTATCAGTTCA+GGG 0.428666 3:+16088395 None:intergenic
AAGACTAGGGGTTGGAATGA+AGG 0.429409 3:-16088100 MsG0380012413.01.T01:CDS
GTTTATCAGGATTCGGAAGA+TGG 0.430618 3:-16087560 MsG0380012413.01.T01:three_prime_UTR
GTGACAGTAGATCAACTCTT+TGG 0.431445 3:+16088573 None:intergenic
GTATACTTTACTTCACAGTT+TGG 0.432438 3:-16087503 MsG0380012413.01.T01:three_prime_UTR
AGAATTTGAGGAGGCTGAAA+AGG 0.432738 3:-16090187 MsG0380012413.01.T01:CDS
CAAAGGATGGGGCAAAGTTA+GGG 0.432778 3:-16088023 MsG0380012413.01.T01:CDS
AAGGATTAACTGACAATGCT+TGG 0.437164 3:-16088138 MsG0380012413.01.T01:CDS
AATAATGGAGGTTGGAACTC+TGG 0.440008 3:-16087818 MsG0380012413.01.T01:CDS
CTTTGGAAAATGAACAAGTA+AGG 0.450760 3:-16087346 MsG0380012413.01.T01:three_prime_UTR
TCGAATAATTTGGCTAATAG+TGG 0.461183 3:-16087977 MsG0380012413.01.T01:CDS
GCACGATGGAATACCATTAT+GGG 0.465596 3:-16088650 MsG0380012413.01.T01:CDS
CTTATATCGAGCAAATAGAT+TGG 0.466739 3:-16088432 MsG0380012413.01.T01:CDS
TCGATATAAGCATCTGGATC+AGG 0.470674 3:+16088445 None:intergenic
CAAAGGGATGATAATCAAAC+AGG 0.471931 3:-16087725 MsG0380012413.01.T01:CDS
ATCAGTTCAGGGTCAATACA+AGG 0.475020 3:+16088406 None:intergenic
ATTTGCTCGATATAAGCATC+TGG 0.475658 3:+16088439 None:intergenic
ACCGGTCAATACTGATATGC+CGG 0.478671 3:-16087590 MsG0380012413.01.T01:three_prime_UTR
CGGTCGATGGTGAAAATCCA+TGG 0.478749 3:-16088300 MsG0380012413.01.T01:CDS
CGTGATAATTCTGAAAATGT+AGG 0.483625 3:-16088205 MsG0380012413.01.T01:CDS
TAGAGCCTCCCCTCGTTTGG+TGG 0.492886 3:+16087783 None:intergenic
TAATGGATCTCAGCCTCAAA+GGG 0.493679 3:-16087741 MsG0380012413.01.T01:CDS
CACAAAACTTAATTTAGTGT+TGG 0.497039 3:+16087403 None:intergenic
AGGATTAACTGACAATGCTT+GGG 0.501555 3:-16088137 MsG0380012413.01.T01:CDS
ATAATGGAGGTTGGAACTCT+GGG 0.508427 3:-16087817 MsG0380012413.01.T01:CDS
TTCTCTTCATAATTATGGGA+AGG 0.511714 3:-16087264 MsG0380012413.01.T01:three_prime_UTR
TAGGAACTACTGATAATCCA+TGG 0.513298 3:-16088186 MsG0380012413.01.T01:CDS
TTAGAAGGAATAATGGAGGT+TGG 0.513562 3:-16087826 MsG0380012413.01.T01:CDS
AAGAAATATTGCACGTTGAG+TGG 0.515446 3:-16088625 MsG0380012413.01.T01:CDS
AAACAGGTCATTACTGGAGG+AGG 0.515705 3:-16087709 MsG0380012413.01.T01:CDS
TAAAAGGCGGGAAGAATTTG+AGG 0.516895 3:-16090199 MsG0380012413.01.T01:CDS
TCTCTTGTTCTTCTTCATCA+GGG 0.519738 3:+16088353 None:intergenic
CCAAATTATTCGACTTCTGG+TGG 0.527034 3:+16087987 None:intergenic
GTCACCACAATGTACTCGAT+TGG 0.527304 3:-16088555 MsG0380012413.01.T01:CDS
CTAGGGGTTGGAATGAAGGA+AGG 0.528521 3:-16088096 MsG0380012413.01.T01:CDS
AGTGCCATTCGTGGAAATCA+AGG 0.528865 3:-16088157 MsG0380012413.01.T01:CDS
GCTTACAGACAGACAAAGGA+TGG 0.534736 3:-16088036 MsG0380012413.01.T01:CDS
ACTGACAATGCTTGGGAAGG+TGG 0.537954 3:-16088130 MsG0380012413.01.T01:CDS
CTTCACAGTTTGGTCCTCTG+TGG 0.544124 3:-16087493 MsG0380012413.01.T01:three_prime_UTR
AATAGAAGAGATGGGAGGAA+AGG 0.550357 3:-16090229 None:intergenic
TTTGAAAATAATGAAGTCCA+AGG 0.550536 3:-16088247 MsG0380012413.01.T01:CDS
GTGGAACAAATGCGCCAAGA+TGG 0.551576 3:-16087889 MsG0380012413.01.T01:CDS
GCTAATAGTGGCAACTCTTG+GGG 0.553972 3:-16087965 MsG0380012413.01.T01:CDS
CCGGTCAATACTGATATGCC+GGG 0.555099 3:-16087589 MsG0380012413.01.T01:three_prime_UTR
CCACAATGTACTCGATTGGA+AGG 0.559333 3:-16088551 MsG0380012413.01.T01:CDS
TCTCTTCATAATTATGGGAA+GGG 0.562674 3:-16087263 MsG0380012413.01.T01:three_prime_UTR
GAATTTGAGGAGGCTGAAAA+GGG 0.562932 3:-16090186 MsG0380012413.01.T01:intron
GATGTTGCAGCACATTCCCA+TGG 0.564310 3:+16088283 None:intergenic
TTGGAACTTATGTATAACAC+TGG 0.565179 3:-16087208 MsG0380012413.01.T01:three_prime_UTR
TGGGTGAGTAGTGCCATTCG+TGG 0.569340 3:-16088166 MsG0380012413.01.T01:CDS
ATCCTGATAAACAGTTATCC+CGG 0.574745 3:+16087571 None:intergenic
TGAAGTCCAAGGACAAAACC+AGG 0.575558 3:-16088236 MsG0380012413.01.T01:CDS
AGGTGGTCATGATAAGACTA+GGG 0.576332 3:-16088113 MsG0380012413.01.T01:CDS
ATAATGGATCTCAGCCTCAA+AGG 0.583345 3:-16087742 MsG0380012413.01.T01:CDS
ATAACAATCAGTGTAGTGGT+TGG 0.585102 3:-16088069 MsG0380012413.01.T01:CDS
AAAGGAATCACGTAAAAGGC+GGG 0.585847 3:-16090211 MsG0380012413.01.T01:CDS
CCCGGCATATCAGTATTGAC+CGG 0.587596 3:+16087589 None:intergenic
TAATCCTTGATTTCCACGAA+TGG 0.587762 3:+16088153 None:intergenic
GAATGTGCTGCAACATCTGT+TGG 0.591507 3:-16088277 MsG0380012413.01.T01:CDS
ATCAGGCAGAGAAATATCAC+AGG 0.591641 3:+16088462 None:intergenic
GGTCGATGGTGAAAATCCAT+GGG 0.591970 3:-16088299 MsG0380012413.01.T01:CDS
ATCAGAGTTACCACCAAACG+AGG 0.595093 3:-16087793 MsG0380012413.01.T01:CDS
AAGGTGGTCATGATAAGACT+AGG 0.599929 3:-16088114 MsG0380012413.01.T01:CDS
AAATTCCAATGAACACAGGA+TGG 0.600012 3:-16087919 MsG0380012413.01.T01:CDS
GTCATGATAAGACTAGGGGT+TGG 0.609594 3:-16088108 MsG0380012413.01.T01:CDS
GATCATAACAATCAGTGTAG+TGG 0.611867 3:-16088073 MsG0380012413.01.T01:CDS
AACAGGTCATTACTGGAGGA+GGG 0.612565 3:-16087708 MsG0380012413.01.T01:CDS
CGAATGGCACTACTCACCCA+TGG 0.614840 3:+16088169 None:intergenic
ATAATGGTATTCCATCGTGC+CGG 0.619995 3:+16088653 None:intergenic
GGATGCTTACAGACAGACAA+AGG 0.625180 3:-16088040 MsG0380012413.01.T01:CDS
ATCAAACAGGTCATTACTGG+AGG 0.631671 3:-16087712 MsG0380012413.01.T01:CDS
GCAGAGAAATATCACAGGGA+AGG 0.633471 3:+16088467 None:intergenic
AGAACACTTCTCAGTATCAG+AGG 0.633707 3:-16087431 MsG0380012413.01.T01:three_prime_UTR
GCTGCAACATCTGTTGGCAG+AGG 0.634134 3:-16088271 MsG0380012413.01.T01:CDS
CTTACAGACAGACAAAGGAT+GGG 0.635550 3:-16088035 MsG0380012413.01.T01:CDS
CAGTTTAGAAGGAATAATGG+AGG 0.640193 3:-16087830 MsG0380012413.01.T01:CDS
TTAACTGACAATGCTTGGGA+AGG 0.640257 3:-16088133 MsG0380012413.01.T01:CDS
AGTTACCACCAAACGAGGGG+AGG 0.640930 3:-16087788 MsG0380012413.01.T01:CDS
CGTTGAGTGGATGTGTAGCA+TGG 0.641013 3:-16088612 MsG0380012413.01.T01:CDS
AATGAAATTCCAATGAACAC+AGG 0.642235 3:-16087923 MsG0380012413.01.T01:CDS
TAGGGGTTGGAATGAAGGAA+GGG 0.645009 3:-16088095 MsG0380012413.01.T01:CDS
CCTTCCAATCGAGTACATTG+TGG 0.645968 3:+16088551 None:intergenic
AGGAACTACTGATAATCCAT+GGG 0.646544 3:-16088185 MsG0380012413.01.T01:CDS
AACACAGGATGGAGAAACAG+TGG 0.648047 3:-16087908 MsG0380012413.01.T01:CDS
ATGTTAGAGTTCCGGCACGA+TGG 0.648281 3:-16088664 MsG0380012413.01.T01:intron
GAAAGGAATCACGTAAAAGG+CGG 0.652440 3:-16090212 MsG0380012413.01.T01:CDS
GAAGTCCAAGGACAAAACCA+GGG 0.653999 3:-16088235 MsG0380012413.01.T01:CDS
AGGTACTTGCTTTATCCGTG+TGG 0.661292 3:-16087527 MsG0380012413.01.T01:three_prime_UTR
TTACAGACAGACAAAGGATG+GGG 0.667318 3:-16088034 MsG0380012413.01.T01:CDS
CAGAGTTACCACCAAACGAG+GGG 0.672609 3:-16087791 MsG0380012413.01.T01:CDS
TCAGAGTTACCACCAAACGA+GGG 0.687990 3:-16087792 MsG0380012413.01.T01:CDS
AAGTCCAAGGACAAAACCAG+GGG 0.692057 3:-16088234 MsG0380012413.01.T01:CDS
GAAGTAAAGTATACACCACA+CGG 0.693191 3:+16087512 None:intergenic
GGTGGTCATGATAAGACTAG+GGG 0.707177 3:-16088112 MsG0380012413.01.T01:CDS
TACACAATAGAAGAGATGGG+AGG 0.716557 3:-16090234 None:intergenic
AAGGCGGGAAGAATTTGAGG+AGG 0.726661 3:-16090196 MsG0380012413.01.T01:CDS
TCAGGCAGAGAAATATCACA+GGG 0.734916 3:+16088463 None:intergenic
AGTCCAAGGACAAAACCAGG+GGG 0.791853 3:-16088233 MsG0380012413.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAAAGAACAAAAATTT+CGG - Chr3:16089061-16089080 MsG0380012413.01.T01:intron 10.0%
!! ATATCTAATTGTTTAATTAA+TGG + Chr3:16088179-16088198 None:intergenic 10.0%
!! GAAAAAAAAAAAAAAAAAGA+GGG - Chr3:16087456-16087475 MsG0380012413.01.T01:three_prime_UTR 10.0%
!! TATCTAATTGTTTAATTAAT+GGG + Chr3:16088178-16088197 None:intergenic 10.0%
!! TGAAAAAAAAAAAAAAAAAG+AGG - Chr3:16087455-16087474 MsG0380012413.01.T01:three_prime_UTR 10.0%
!! AGCCAATTAATAATATAAAT+TGG + Chr3:16087848-16087867 None:intergenic 15.0%
!! CACCAATTTATATTATTAAT+TGG - Chr3:16087843-16087862 MsG0380012413.01.T01:CDS 15.0%
!! GTAACTATAGTTTATATAAT+TGG - Chr3:16088476-16088495 MsG0380012413.01.T01:CDS 15.0%
!! TGATAATTTATTGTATGTTA+CGG - Chr3:16088635-16088654 MsG0380012413.01.T01:CDS 15.0%
!!! GAATTTAATTTGAAAGAAAT+GGG + Chr3:16088391-16088410 None:intergenic 15.0%
!!! TTTTGTTCTTTTATATTGTA+TGG + Chr3:16089057-16089076 None:intergenic 15.0%
!! AGACATAATATAAGCTATAA+TGG - Chr3:16089623-16089642 MsG0380012413.01.T01:intron 20.0%
!! CGTTATGATTAATATTGAAT+CGG - Chr3:16087389-16087408 MsG0380012413.01.T01:three_prime_UTR 20.0%
!! TACAAGATCAAAACAAAATA+AGG + Chr3:16090079-16090098 None:intergenic 20.0%
!! TGTAACTATACTTTAATCAT+TGG - Chr3:16088423-16088442 MsG0380012413.01.T01:CDS 20.0%
!!! AAATTATCATTGTAGTTTTC+AGG + Chr3:16088624-16088643 None:intergenic 20.0%
!!! ATATAATTGGTTTGTTGAAT+AGG - Chr3:16088489-16088508 MsG0380012413.01.T01:CDS 20.0%
!!! ATTTGTTTTTTGGTTTATAC+CGG - Chr3:16089773-16089792 MsG0380012413.01.T01:intron 20.0%
!!! ATTTTAACACACGAAAAAAA+AGG + Chr3:16088295-16088314 None:intergenic 20.0%
!!! GGAATTTAATTTGAAAGAAA+TGG + Chr3:16088392-16088411 None:intergenic 20.0%
!!! TTTTTTTCGTGTGTTAAAAT+AGG - Chr3:16088295-16088314 MsG0380012413.01.T01:CDS 20.0%
! AACTGTGTCAAGAAATTATA+TGG + Chr3:16088564-16088583 None:intergenic 25.0%
! CAAAAACAGAGAAATAGTAT+TGG - Chr3:16087523-16087542 MsG0380012413.01.T01:three_prime_UTR 25.0%
! CAAAATTAATTGCAGCTAAT+GGG - Chr3:16087959-16087978 MsG0380012413.01.T01:CDS 25.0%
! CACAAAACTTAATTTAGTGT+TGG + Chr3:16089981-16090000 None:intergenic 25.0%
! GATGTTCTCTTCATAATTAT+GGG - Chr3:16090113-16090132 MsG0380012413.01.T01:intron 25.0%
! TATAGTTACATGATATGAAC+AGG + Chr3:16088413-16088432 None:intergenic 25.0%
! TTCAATATTAATCATAACGC+TGG + Chr3:16087388-16087407 None:intergenic 25.0%
! TTTCAGGCATAAAAAATTAC+AGG + Chr3:16088608-16088627 None:intergenic 25.0%
! TTTGAAAATAATGAAGTCCA+AGG - Chr3:16089134-16089153 MsG0380012413.01.T01:intron 25.0%
!! ATCTTGTAGACTATCAATTT+TGG - Chr3:16090091-16090110 MsG0380012413.01.T01:intron 25.0%
!! ATTAGCTGCAATTAATTTTG+CGG + Chr3:16087959-16087978 None:intergenic 25.0%
!! CTATACTTTAATCATTGGTT+TGG - Chr3:16088428-16088447 MsG0380012413.01.T01:CDS 25.0%
!! GCAATTCATACTCTAAAAAA+AGG - Chr3:16088357-16088376 MsG0380012413.01.T01:CDS 25.0%
!!! CAATACTATTTCTCTGTTTT+TGG + Chr3:16087525-16087544 None:intergenic 25.0%
!!! GGACAATAGTATTTGTTTTT+TGG - Chr3:16089763-16089782 MsG0380012413.01.T01:intron 25.0%
!!! TAAATCTCATGTGCTTTTTT+GGG - Chr3:16090007-16090026 MsG0380012413.01.T01:intron 25.0%
AAAATGCCAAAAAACGTTAC+TGG - Chr3:16088877-16088896 MsG0380012413.01.T01:intron 30.0%
AAAGACAAGGTGAAAACTTT+GGG - Chr3:16088135-16088154 MsG0380012413.01.T01:CDS 30.0%
AAATGCCAAAAAACGTTACT+GGG - Chr3:16088878-16088897 MsG0380012413.01.T01:intron 30.0%
AATGAAATTCCAATGAACAC+AGG - Chr3:16089458-16089477 MsG0380012413.01.T01:intron 30.0%
AATGGTGAAAAAGGAAATGA+GGG - Chr3:16087428-16087447 MsG0380012413.01.T01:three_prime_UTR 30.0%
ATAATCAAACAGGTCATTAC+TGG - Chr3:16089666-16089685 MsG0380012413.01.T01:intron 30.0%
CAATATTTCTTCTCCCATAA+TGG + Chr3:16088747-16088766 None:intergenic 30.0%
CATTTCAATGACATTTCAGT+AGG + Chr3:16087927-16087946 None:intergenic 30.0%
CTAATTCCTTTATCAGTTCA+GGG + Chr3:16088989-16089008 None:intergenic 30.0%
CTTATATCGAGCAAATAGAT+TGG - Chr3:16088949-16088968 MsG0380012413.01.T01:intron 30.0%
GATAACTGTTTATCAGGATT+CGG - Chr3:16089814-16089833 MsG0380012413.01.T01:intron 30.0%
GCAAAATTAATTGCAGCTAA+TGG - Chr3:16087958-16087977 MsG0380012413.01.T01:CDS 30.0%
GGATGTTCTCTTCATAATTA+TGG - Chr3:16090112-16090131 MsG0380012413.01.T01:intron 30.0%
GTATAAACAATACAAGAGAG+AGG - Chr3:16088251-16088270 MsG0380012413.01.T01:CDS 30.0%
GTATACTTTACTTCACAGTT+TGG - Chr3:16089878-16089897 MsG0380012413.01.T01:intron 30.0%
GTGAAGATCATATATGTTGT+AGG - Chr3:16087481-16087500 MsG0380012413.01.T01:three_prime_UTR 30.0%
TAAAGACAAGGTGAAAACTT+TGG - Chr3:16088134-16088153 MsG0380012413.01.T01:CDS 30.0%
TAATGAATGTTCCTTGTGTT+GGG + Chr3:16087876-16087895 None:intergenic 30.0%
TAATGGTGAAAAAGGAAATG+AGG - Chr3:16087427-16087446 MsG0380012413.01.T01:three_prime_UTR 30.0%
TCACAGTTTAGAAGGAATAA+TGG - Chr3:16089548-16089567 MsG0380012413.01.T01:intron 30.0%
TCGAATAATTTGGCTAATAG+TGG - Chr3:16089404-16089423 MsG0380012413.01.T01:intron 30.0%
TCTAATTCCTTTATCAGTTC+AGG + Chr3:16088990-16089009 None:intergenic 30.0%
TCTCTTCATAATTATGGGAA+GGG - Chr3:16090118-16090137 MsG0380012413.01.T01:intron 30.0%
TTAATGAATGTTCCTTGTGT+TGG + Chr3:16087877-16087896 None:intergenic 30.0%
TTCTCTTCATAATTATGGGA+AGG - Chr3:16090117-16090136 MsG0380012413.01.T01:intron 30.0%
TTGGAACTTATGTATAACAC+TGG - Chr3:16090173-16090192 MsG0380012413.01.T01:intron 30.0%
TTGTTCAGATGTTCAACTTT+GGG + Chr3:16090199-16090218 None:intergenic 30.0%
! AGTTTTCACCTTGTCTTTAA+AGG + Chr3:16088133-16088152 None:intergenic 30.0%
! ATAGAGTTTGGAGTTGAAAT+TGG - Chr3:16088004-16088023 MsG0380012413.01.T01:CDS 30.0%
! CGTGATAATTCTGAAAATGT+AGG - Chr3:16089176-16089195 MsG0380012413.01.T01:intron 30.0%
! CTTTGCTTGTATTGTAGTTT+TGG - Chr3:16090154-16090173 MsG0380012413.01.T01:intron 30.0%
! CTTTGGAAAATGAACAAGTA+AGG - Chr3:16090035-16090054 MsG0380012413.01.T01:intron 30.0%
! TATTAATCATAACGCTGGTT+TGG + Chr3:16087383-16087402 None:intergenic 30.0%
!! TAATCATTGGTTTGGTGTAT+AGG - Chr3:16088436-16088455 MsG0380012413.01.T01:CDS 30.0%
!!! CTAAATCTCATGTGCTTTTT+TGG - Chr3:16090006-16090025 MsG0380012413.01.T01:intron 30.0%
!!! TGCTTTTTTGGGTATAACTT+TGG - Chr3:16090018-16090037 MsG0380012413.01.T01:intron 30.0%
AAAACTCAGTACATTGCATC+AGG + Chr3:16088678-16088697 None:intergenic 35.0%
AAATTCCAATGAACACAGGA+TGG - Chr3:16089462-16089481 MsG0380012413.01.T01:intron 35.0%
AAGAAATATTGCACGTTGAG+TGG - Chr3:16088756-16088775 MsG0380012413.01.T01:intron 35.0%
AAGACAAGGTGAAAACTTTG+GGG - Chr3:16088136-16088155 MsG0380012413.01.T01:CDS 35.0%
AAGGATTAACTGACAATGCT+TGG - Chr3:16089243-16089262 MsG0380012413.01.T01:intron 35.0%
AATAAACGAAGCAGAAACAG+AGG - Chr3:16087581-16087600 MsG0380012413.01.T01:three_prime_UTR 35.0%
AGAACAAAAATTTCGGTCGA+TGG - Chr3:16089068-16089087 MsG0380012413.01.T01:intron 35.0%
AGAGTATGAATTGCAGAACT+TGG + Chr3:16088351-16088370 None:intergenic 35.0%
AGGAACTACTGATAATCCAT+GGG - Chr3:16089196-16089215 MsG0380012413.01.T01:intron 35.0%
AGGATTAACTGACAATGCTT+GGG - Chr3:16089244-16089263 MsG0380012413.01.T01:intron 35.0%
ATAACAATCAGTGTAGTGGT+TGG - Chr3:16089312-16089331 MsG0380012413.01.T01:intron 35.0%
ATCCTGATAAACAGTTATCC+CGG + Chr3:16089813-16089832 None:intergenic 35.0%
ATTCATGTCTCTTCCATTGT+TGG + Chr3:16087551-16087570 None:intergenic 35.0%
ATTGAGACAAAGACAAGAGA+TGG - Chr3:16087249-16087268 MsG0380012413.01.T01:three_prime_UTR 35.0%
ATTTCTTGACACAGTTTGTG+TGG - Chr3:16088568-16088587 MsG0380012413.01.T01:CDS 35.0%
ATTTGCTCGATATAAGCATC+TGG + Chr3:16088945-16088964 None:intergenic 35.0%
CAAAAGATCAATGCAGTAGT+AGG - Chr3:16088078-16088097 MsG0380012413.01.T01:CDS 35.0%
CAAAGGGATGATAATCAAAC+AGG - Chr3:16089656-16089675 MsG0380012413.01.T01:intron 35.0%
CAGTTTAGAAGGAATAATGG+AGG - Chr3:16089551-16089570 MsG0380012413.01.T01:intron 35.0%
CTATTGTCCATCAAAAAACG+AGG + Chr3:16089752-16089771 None:intergenic 35.0%
GAAGTAAAGTATACACCACA+CGG + Chr3:16089872-16089891 None:intergenic 35.0%
GATCATAACAATCAGTGTAG+TGG - Chr3:16089308-16089327 MsG0380012413.01.T01:intron 35.0%
GCAAAGTTAGGGATAATTCT+TGG - Chr3:16089369-16089388 MsG0380012413.01.T01:intron 35.0%
GTTGTTCAGATGTTCAACTT+TGG + Chr3:16090200-16090219 None:intergenic 35.0%
GTTTGATTATCATCCCTTTG+AGG + Chr3:16089656-16089675 None:intergenic 35.0%
TAATCCTTGATTTCCACGAA+TGG + Chr3:16089231-16089250 None:intergenic 35.0%
TAGCCAAATTATTCGACTTC+TGG + Chr3:16089400-16089419 None:intergenic 35.0%
TAGGAACTACTGATAATCCA+TGG - Chr3:16089195-16089214 MsG0380012413.01.T01:intron 35.0%
TATGAATTGCAGAACTTGGA+GGG + Chr3:16088347-16088366 None:intergenic 35.0%
TATTGACCCTGAACTGATAA+AGG - Chr3:16088980-16088999 MsG0380012413.01.T01:intron 35.0%
TCTCTTGTTCTTCTTCATCA+GGG + Chr3:16089031-16089050 None:intergenic 35.0%
TTCATGTCTCTTCCATTGTT+GGG + Chr3:16087550-16087569 None:intergenic 35.0%
TTCTCTTGTTCTTCTTCATC+AGG + Chr3:16089032-16089051 None:intergenic 35.0%
TTGAGACAAAGACAAGAGAT+GGG - Chr3:16087250-16087269 MsG0380012413.01.T01:three_prime_UTR 35.0%
TTTCGAACATGTTAGAGTTC+CGG - Chr3:16088709-16088728 MsG0380012413.01.T01:intron 35.0%
! AAATAGGAGCCTTTTGACAT+TGG - Chr3:16088311-16088330 MsG0380012413.01.T01:CDS 35.0%
! AACCTTCACCTTTAAAGACA+AGG - Chr3:16088122-16088141 MsG0380012413.01.T01:CDS 35.0%
! AATAGGAGCCTTTTGACATT+GGG - Chr3:16088312-16088331 MsG0380012413.01.T01:CDS 35.0%
! AATAGTATTGGACCCAACAA+TGG - Chr3:16087535-16087554 MsG0380012413.01.T01:three_prime_UTR 35.0%
! CATTGCATCAGGTGTTATAA+TGG + Chr3:16088667-16088686 None:intergenic 35.0%
! TCCTCTGTGGAGAAATTTTT+GGG - Chr3:16089901-16089920 MsG0380012413.01.T01:intron 35.0%
! TTAGAAGGAATAATGGAGGT+TGG - Chr3:16089555-16089574 MsG0380012413.01.T01:intron 35.0%
! TTTTGCCCAGTAACGTTTTT+TGG + Chr3:16088886-16088905 None:intergenic 35.0%
!! TTTTCATGTTGCTTCCATCT+TGG + Chr3:16089509-16089528 None:intergenic 35.0%
AAAGGAATCACGTAAAAGGC+GGG - Chr3:16087170-16087189 MsG0380012413.01.T01:three_prime_UTR 40.0%
AAGGTGGTCATGATAAGACT+AGG - Chr3:16089267-16089286 MsG0380012413.01.T01:intron 40.0%
ACCCAAAAATTTCTCCACAG+AGG + Chr3:16089905-16089924 None:intergenic 40.0%
AGAAACAGAGGTGGGAAAAT+GGG - Chr3:16087593-16087612 MsG0380012413.01.T01:three_prime_UTR 40.0%
AGAACACTTCTCAGTATCAG+AGG - Chr3:16089950-16089969 MsG0380012413.01.T01:intron 40.0%
AGAATTTGAGGAGGCTGAAA+AGG - Chr3:16087194-16087213 MsG0380012413.01.T01:three_prime_UTR 40.0%
AGCTAATGGGAAGATATGCA+GGG - Chr3:16087972-16087991 MsG0380012413.01.T01:CDS 40.0%
AGGTGGTCATGATAAGACTA+GGG - Chr3:16089268-16089287 MsG0380012413.01.T01:intron 40.0%
AGTAGTTCGAGAATAGAGAG+AGG - Chr3:16088211-16088230 MsG0380012413.01.T01:CDS 40.0%
ATAATGGTATTCCATCGTGC+CGG + Chr3:16088731-16088750 None:intergenic 40.0%
ATCAAACAGGTCATTACTGG+AGG - Chr3:16089669-16089688 MsG0380012413.01.T01:intron 40.0%
ATCAGGCAGAGAAATATCAC+AGG + Chr3:16088922-16088941 None:intergenic 40.0%
ATCAGTTCAGGGTCAATACA+AGG + Chr3:16088978-16088997 None:intergenic 40.0%
ATGTTGTAGGTCGTTGAAGA+GGG - Chr3:16087494-16087513 MsG0380012413.01.T01:three_prime_UTR 40.0%
ATTGAATCGGAAGAACCTGA+CGG - Chr3:16087402-16087421 MsG0380012413.01.T01:three_prime_UTR 40.0%
CAAGCGATTCACAGTTTAGA+AGG - Chr3:16089540-16089559 MsG0380012413.01.T01:intron 40.0%
CCAAATTATTCGACTTCTGG+TGG + Chr3:16089397-16089416 None:intergenic 40.0%
CCACCAGAAGTCGAATAATT+TGG - Chr3:16089394-16089413 MsG0380012413.01.T01:intron 40.0%
CTTACAGACAGACAAAGGAT+GGG - Chr3:16089346-16089365 MsG0380012413.01.T01:intron 40.0%
GAAAGGAATCACGTAAAAGG+CGG - Chr3:16087169-16087188 MsG0380012413.01.T01:three_prime_UTR 40.0%
GAATTTGAGGAGGCTGAAAA+GGG - Chr3:16087195-16087214 MsG0380012413.01.T01:three_prime_UTR 40.0%
GAGGAAAGGAATCACGTAAA+AGG - Chr3:16087166-16087185 MsG0380012413.01.T01:three_prime_UTR 40.0%
GAGGGAGCAAAGTAGAAAAA+GGG - Chr3:16089691-16089710 MsG0380012413.01.T01:intron 40.0%
GCACGATGGAATACCATTAT+GGG - Chr3:16088731-16088750 MsG0380012413.01.T01:intron 40.0%
GTAGTTCGAGAATAGAGAGA+GGG - Chr3:16088212-16088231 MsG0380012413.01.T01:CDS 40.0%
GTATGAATTGCAGAACTTGG+AGG + Chr3:16088348-16088367 None:intergenic 40.0%
GTGACAGTAGATCAACTCTT+TGG + Chr3:16088811-16088830 None:intergenic 40.0%
GTTTATCAGGATTCGGAAGA+TGG - Chr3:16089821-16089840 MsG0380012413.01.T01:intron 40.0%
TAAAAGGCGGGAAGAATTTG+AGG - Chr3:16087182-16087201 MsG0380012413.01.T01:three_prime_UTR 40.0%
TATGTTGTAGGTCGTTGAAG+AGG - Chr3:16087493-16087512 MsG0380012413.01.T01:three_prime_UTR 40.0%
TCAGGCAGAGAAATATCACA+GGG + Chr3:16088921-16088940 None:intergenic 40.0%
TCGATATAAGCATCTGGATC+AGG + Chr3:16088939-16088958 None:intergenic 40.0%
TTAACTGACAATGCTTGGGA+AGG - Chr3:16089248-16089267 MsG0380012413.01.T01:intron 40.0%
TTACAGACAGACAAAGGATG+GGG - Chr3:16089347-16089366 MsG0380012413.01.T01:intron 40.0%
TTTCTCCATCCTGTGTTCAT+TGG + Chr3:16089470-16089489 None:intergenic 40.0%
! AATAATGGAGGTTGGAACTC+TGG - Chr3:16089563-16089582 MsG0380012413.01.T01:intron 40.0%
! ATAATGGAGGTTGGAACTCT+GGG - Chr3:16089564-16089583 MsG0380012413.01.T01:intron 40.0%
! CACCTTGTCTTTAAAGGTGA+AGG + Chr3:16088127-16088146 None:intergenic 40.0%
! GGGGTGTTTCAAATAGAGTT+TGG - Chr3:16087992-16088011 MsG0380012413.01.T01:CDS 40.0%
! GTCCTCTGTGGAGAAATTTT+TGG - Chr3:16089900-16089919 MsG0380012413.01.T01:intron 40.0%
! GTTTGATAATCACACCAAGC+AGG - Chr3:16087640-16087659 MsG0380012413.01.T01:three_prime_UTR 40.0%
! TAATGGATCTCAGCCTCAAA+GGG - Chr3:16089640-16089659 MsG0380012413.01.T01:intron 40.0%
!! ATAATGGATCTCAGCCTCAA+AGG - Chr3:16089639-16089658 MsG0380012413.01.T01:intron 40.0%
!! CAAGCAGGTTTGAGTTTTAG+AGG - Chr3:16087655-16087674 MsG0380012413.01.T01:three_prime_UTR 40.0%
!! CTCTAAAACTCAAACCTGCT+TGG + Chr3:16087657-16087676 None:intergenic 40.0%
!! GCATTGATCTTTTGCAGTTC+CGG + Chr3:16088072-16088091 None:intergenic 40.0%
AAACAGGTCATTACTGGAGG+AGG - Chr3:16089672-16089691 MsG0380012413.01.T01:intron 45.0%
AAACGAAGCAGAAACAGAGG+TGG - Chr3:16087584-16087603 MsG0380012413.01.T01:three_prime_UTR 45.0%
AACACAGGATGGAGAAACAG+TGG - Chr3:16089473-16089492 MsG0380012413.01.T01:intron 45.0%
AACAGGTCATTACTGGAGGA+GGG - Chr3:16089673-16089692 MsG0380012413.01.T01:intron 45.0%
AACGAAGCAGAAACAGAGGT+GGG - Chr3:16087585-16087604 MsG0380012413.01.T01:three_prime_UTR 45.0%
AAGACAAGAGATGGGAGGAA+AGG - Chr3:16087258-16087277 MsG0380012413.01.T01:three_prime_UTR 45.0%
AAGACTAGGGGTTGGAATGA+AGG - Chr3:16089281-16089300 MsG0380012413.01.T01:intron 45.0%
AAGTCCAAGGACAAAACCAG+GGG - Chr3:16089147-16089166 MsG0380012413.01.T01:intron 45.0%
AATTATCACGACAATCCCCC+TGG + Chr3:16089166-16089185 None:intergenic 45.0%
ACAAAGGATGGGGCAAAGTT+AGG - Chr3:16089357-16089376 MsG0380012413.01.T01:intron 45.0%
ACCGGTCAATACTGATATGC+CGG - Chr3:16089791-16089810 MsG0380012413.01.T01:intron 45.0%
AGACAAAGACAAGAGATGGG+AGG - Chr3:16087253-16087272 MsG0380012413.01.T01:three_prime_UTR 45.0%
AGGTACTTGCTTTATCCGTG+TGG - Chr3:16089854-16089873 MsG0380012413.01.T01:intron 45.0%
ATCAGAGTTACCACCAAACG+AGG - Chr3:16089588-16089607 MsG0380012413.01.T01:intron 45.0%
ATGCACCTCCCAATGTCAAA+AGG + Chr3:16088323-16088342 None:intergenic 45.0%
CAAAGGATGGGGCAAAGTTA+GGG - Chr3:16089358-16089377 MsG0380012413.01.T01:intron 45.0%
CAGAAACAGAGGTGGGAAAA+TGG - Chr3:16087592-16087611 MsG0380012413.01.T01:three_prime_UTR 45.0%
CAGCTAATGGGAAGATATGC+AGG - Chr3:16087971-16087990 MsG0380012413.01.T01:CDS 45.0%
CAGTGTAGTGGTTGGAATTC+TGG - Chr3:16089320-16089339 MsG0380012413.01.T01:intron 45.0%
CCACAATGTACTCGATTGGA+AGG - Chr3:16088830-16088849 MsG0380012413.01.T01:intron 45.0%
CCTTCCAATCGAGTACATTG+TGG + Chr3:16088833-16088852 None:intergenic 45.0%
GAAGTCCAAGGACAAAACCA+GGG - Chr3:16089146-16089165 MsG0380012413.01.T01:intron 45.0%
GAATGTGCTGCAACATCTGT+TGG - Chr3:16089104-16089123 MsG0380012413.01.T01:intron 45.0%
GCAGAGAAATATCACAGGGA+AGG + Chr3:16088917-16088936 None:intergenic 45.0%
GCTAATAGTGGCAACTCTTG+GGG - Chr3:16089416-16089435 MsG0380012413.01.T01:intron 45.0%
GCTAATGGGAAGATATGCAG+GGG - Chr3:16087973-16087992 MsG0380012413.01.T01:CDS 45.0%
GCTTACAGACAGACAAAGGA+TGG - Chr3:16089345-16089364 MsG0380012413.01.T01:intron 45.0%
GGAGGGAGCAAAGTAGAAAA+AGG - Chr3:16089690-16089709 MsG0380012413.01.T01:intron 45.0%
GGATGCTTACAGACAGACAA+AGG - Chr3:16089341-16089360 MsG0380012413.01.T01:intron 45.0%
GGCACGATGGAATACCATTA+TGG - Chr3:16088730-16088749 MsG0380012413.01.T01:intron 45.0%
GGCTAATAGTGGCAACTCTT+GGG - Chr3:16089415-16089434 MsG0380012413.01.T01:intron 45.0%
GGTCGATGGTGAAAATCCAT+GGG - Chr3:16089082-16089101 MsG0380012413.01.T01:intron 45.0%
GGTGGTCATGATAAGACTAG+GGG - Chr3:16089269-16089288 MsG0380012413.01.T01:intron 45.0%
GTACTCGATTGGAAGGATTC+AGG - Chr3:16088837-16088856 MsG0380012413.01.T01:intron 45.0%
GTCACCACAATGTACTCGAT+TGG - Chr3:16088826-16088845 MsG0380012413.01.T01:intron 45.0%
GTCATGATAAGACTAGGGGT+TGG - Chr3:16089273-16089292 MsG0380012413.01.T01:intron 45.0%
GTCCATCAAAAAACGAGGCA+CGG + Chr3:16089747-16089766 None:intergenic 45.0%
TAGGGGTTGGAATGAAGGAA+GGG - Chr3:16089286-16089305 MsG0380012413.01.T01:intron 45.0%
TCAAAAAACGAGGCACGGTA+TGG + Chr3:16089742-16089761 None:intergenic 45.0%
TCAGAGTTACCACCAAACGA+GGG - Chr3:16089589-16089608 MsG0380012413.01.T01:intron 45.0%
TGAAGTCCAAGGACAAAACC+AGG - Chr3:16089145-16089164 MsG0380012413.01.T01:intron 45.0%
TGCCGGGATAACTGTTTATC+AGG - Chr3:16089808-16089827 MsG0380012413.01.T01:intron 45.0%
TGGCTAATAGTGGCAACTCT+TGG - Chr3:16089414-16089433 MsG0380012413.01.T01:intron 45.0%
TTGAATCGGAAGAACCTGAC+GGG - Chr3:16087403-16087422 MsG0380012413.01.T01:three_prime_UTR 45.0%
! AGTGCCATTCGTGGAAATCA+AGG - Chr3:16089224-16089243 MsG0380012413.01.T01:intron 45.0%
! AGTTCTTTTGCAGCATGGGA+TGG - Chr3:16087718-16087737 MsG0380012413.01.T01:CDS 45.0%
! CTCGAGTTCTTTTGCAGCAT+GGG - Chr3:16087714-16087733 MsG0380012413.01.T01:CDS 45.0%
! TTTTTCACCATTAGCCCGTC+AGG + Chr3:16087420-16087439 None:intergenic 45.0%
!! CGGAAGATGGTTGCTATTTG+AGG - Chr3:16089834-16089853 MsG0380012413.01.T01:intron 45.0%
!! TGACGGGCTAATGGTGAAAA+AGG - Chr3:16087419-16087438 MsG0380012413.01.T01:three_prime_UTR 45.0%
!!! TACCGTGCCTCGTTTTTTGA+TGG - Chr3:16089742-16089761 MsG0380012413.01.T01:intron 45.0%
AAGGCGGGAAGAATTTGAGG+AGG - Chr3:16087185-16087204 MsG0380012413.01.T01:three_prime_UTR 50.0%
ACTGACAATGCTTGGGAAGG+TGG - Chr3:16089251-16089270 MsG0380012413.01.T01:intron 50.0%
AGTCCAAGGACAAAACCAGG+GGG - Chr3:16089148-16089167 MsG0380012413.01.T01:intron 50.0%
ATAGGTGCTCGCTGTCAAAC+AGG - Chr3:16088454-16088473 MsG0380012413.01.T01:CDS 50.0%
ATGTTAGAGTTCCGGCACGA+TGG - Chr3:16088717-16088736 MsG0380012413.01.T01:intron 50.0%
CAGAGTTACCACCAAACGAG+GGG - Chr3:16089590-16089609 MsG0380012413.01.T01:intron 50.0%
CAGTAACGAGGGTGGATGAT+GGG + Chr3:16087785-16087804 None:intergenic 50.0%
CCGGTCAATACTGATATGCC+GGG - Chr3:16089792-16089811 MsG0380012413.01.T01:intron 50.0%
CGGTCGATGGTGAAAATCCA+TGG - Chr3:16089081-16089100 MsG0380012413.01.T01:intron 50.0%
CGTTGAGTGGATGTGTAGCA+TGG - Chr3:16088769-16088788 MsG0380012413.01.T01:intron 50.0%
CTAGGGGTTGGAATGAAGGA+AGG - Chr3:16089285-16089304 MsG0380012413.01.T01:intron 50.0%
CTTCACAGTTTGGTCCTCTG+TGG - Chr3:16089888-16089907 MsG0380012413.01.T01:intron 50.0%
GATGTTGCAGCACATTCCCA+TGG + Chr3:16089101-16089120 None:intergenic 50.0%
GGAGGAGGATAGGAAACAAC+TGG - Chr3:16087223-16087242 MsG0380012413.01.T01:three_prime_UTR 50.0%
GGTTCATGGTGCAAGGATGT+AGG - Chr3:16087813-16087832 MsG0380012413.01.T01:CDS 50.0%
GTGGAACAAATGCGCCAAGA+TGG - Chr3:16089492-16089511 MsG0380012413.01.T01:intron 50.0%
TATTAGAGCCTCCCCTCGTT+TGG + Chr3:16089604-16089623 None:intergenic 50.0%
TCAGTGTGCCTATTTGCAGC+CGG - Chr3:16088050-16088069 MsG0380012413.01.T01:CDS 50.0%
TGAGGAGGCTGAAAAGGGTA+CGG - Chr3:16087200-16087219 MsG0380012413.01.T01:three_prime_UTR 50.0%
TTGCAGTTCCGGCTGCAAAT+AGG + Chr3:16088061-16088080 None:intergenic 50.0%
TTGGCTTCAAGCCCAACACA+AGG - Chr3:16087862-16087881 MsG0380012413.01.T01:CDS 50.0%
! AGGAGCCTTTTGACATTGGG+AGG - Chr3:16088315-16088334 MsG0380012413.01.T01:CDS 50.0%
! GCTCGAGTTCTTTTGCAGCA+TGG - Chr3:16087713-16087732 MsG0380012413.01.T01:CDS 50.0%
!! CCCGGCATATCAGTATTGAC+CGG + Chr3:16089795-16089814 None:intergenic 50.0%
!!! AATCCCCCTGGTTTTGTCCT+TGG + Chr3:16089154-16089173 None:intergenic 50.0%
AGTTACCACCAAACGAGGGG+AGG - Chr3:16089593-16089612 MsG0380012413.01.T01:intron 55.0%
CGAATGGCACTACTCACCCA+TGG + Chr3:16089215-16089234 None:intergenic 55.0%
GAACTCGAGCCTGCCAGTTA+TGG + Chr3:16087703-16087722 None:intergenic 55.0%
GATCCAGTTAACCCCACCAC+TGG - Chr3:16087677-16087696 MsG0380012413.01.T01:CDS 55.0%
GCAGTAACGAGGGTGGATGA+TGG + Chr3:16087786-16087805 None:intergenic 55.0%
GCTGCAACATCTGTTGGCAG+AGG - Chr3:16089110-16089129 MsG0380012413.01.T01:intron 55.0%
TGCCAGTTATGGCCAGTGGT+GGG + Chr3:16087692-16087711 None:intergenic 55.0%
TTACTGCCAGACGCGGTTCA+TGG - Chr3:16087799-16087818 MsG0380012413.01.T01:CDS 55.0%
TTGCAGCATGGGATGGATCG+TGG - Chr3:16087725-16087744 MsG0380012413.01.T01:CDS 55.0%
! AGGAGGCTGAAAAGGGTACG+GGG - Chr3:16087202-16087221 MsG0380012413.01.T01:three_prime_UTR 55.0%
! GAGGAGGCTGAAAAGGGTAC+GGG - Chr3:16087201-16087220 MsG0380012413.01.T01:three_prime_UTR 55.0%
! TGGGTGAGTAGTGCCATTCG+TGG - Chr3:16089215-16089234 MsG0380012413.01.T01:intron 55.0%
!! GGAAGAACCTGACGGGCTAA+TGG - Chr3:16087410-16087429 MsG0380012413.01.T01:three_prime_UTR 55.0%
AACCGCGTCTGGCAGTAACG+AGG + Chr3:16087797-16087816 None:intergenic 60.0%
ACCCCACCACTGGCCATAAC+TGG - Chr3:16087687-16087706 MsG0380012413.01.T01:CDS 60.0%
ACCCTCGTTACTGCCAGACG+CGG - Chr3:16087792-16087811 MsG0380012413.01.T01:CDS 60.0%
ACCGCGTCTGGCAGTAACGA+GGG + Chr3:16087796-16087815 None:intergenic 60.0%
AGCCTGCCAGTTATGGCCAG+TGG + Chr3:16087696-16087715 None:intergenic 60.0%
CACCACTGGCCATAACTGGC+AGG - Chr3:16087691-16087710 MsG0380012413.01.T01:CDS 60.0%
CAGACGCGGTTCATGGTGCA+AGG - Chr3:16087806-16087825 MsG0380012413.01.T01:CDS 60.0%
CGTGGACACTGACAGAGCTC+TGG - Chr3:16087743-16087762 MsG0380012413.01.T01:CDS 60.0%
CTGCCAGTTATGGCCAGTGG+TGG + Chr3:16087693-16087712 None:intergenic 60.0%
CTTGCACCATGAACCGCGTC+TGG + Chr3:16087808-16087827 None:intergenic 60.0%
GCCAGTTATGGCCAGTGGTG+GGG + Chr3:16087691-16087710 None:intergenic 60.0%
TAGAGCCTCCCCTCGTTTGG+TGG + Chr3:16089601-16089620 None:intergenic 60.0%
! AAGGGTACGGGGAGGAGGAT+AGG - Chr3:16087213-16087232 MsG0380012413.01.T01:three_prime_UTR 60.0%
! AGGCTGAAAAGGGTACGGGG+AGG - Chr3:16087205-16087224 MsG0380012413.01.T01:three_prime_UTR 60.0%
! CTGAAAAGGGTACGGGGAGG+AGG - Chr3:16087208-16087227 MsG0380012413.01.T01:three_prime_UTR 60.0%
! TGGCCAGTGGTGGGGTTAAC+TGG + Chr3:16087683-16087702 None:intergenic 60.0%
GCGTCTGGCAGTAACGAGGG+TGG + Chr3:16087793-16087812 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 16087162 16090241 16087162 ID=MsG0380012413.01;Name=MsG0380012413.01
Chr3 mRNA 16087162 16090241 16087162 ID=MsG0380012413.01.T01;Parent=MsG0380012413.01;Name=MsG0380012413.01.T01;_AED=0.34;_eAED=0.37;_QI=0|0|0.5|1|1|1|2|514|352
Chr3 exon 16087162 16088679 16087162 ID=MsG0380012413.01.T01:exon:21739;Parent=MsG0380012413.01.T01
Chr3 exon 16090187 16090241 16090187 ID=MsG0380012413.01.T01:exon:21738;Parent=MsG0380012413.01.T01
Chr3 CDS 16090187 16090241 16090187 ID=MsG0380012413.01.T01:cds;Parent=MsG0380012413.01.T01
Chr3 CDS 16087676 16088679 16087676 ID=MsG0380012413.01.T01:cds;Parent=MsG0380012413.01.T01
Chr3 three_prime_UTR 16087162 16087675 16087162 ID=MsG0380012413.01.T01:three_prime_utr;Parent=MsG0380012413.01.T01
Gene Sequence

>MsG0380012413.01.T01

ATGGGAGGAAAGGAATCACGTAAAAGGCGGGAAGAATTTGAGGAGGCTGAAAAGGAGTTCCGGCACGATGGAATACCATTATGGGAGAAGAAATATTGCACGTTGAGTGGATGTGTAGCATGGCAGAAGATTGTCGATTCCAAAGAGTTGATCTACTGTCACCACAATGTACTCGATTGGAAGGATTCAGGTGCTGAAGAAGCATTTCAAAATGCCAAAAAACGTTACTGGGCAAAAGTCAACAACCTTCCCTGTGATATTTCTCTGCCTGATCCAGATGCTTATATCGAGCAAATAGATTGGAATCCTTGTATTGACCCTGAACTGATAAAGGAATTAGATAACGCATTCTTTACTGTCCCTGATGAAGAAGAACAAGAGAATGCCATACAATATAAAAGAACAAAAATTTCGGTCGATGGTGAAAATCCATGGGAATGTGCTGCAACATCTGTTGGCAGAGGTTTTGAAAATAATGAAGTCCAAGGACAAAACCAGGGGGATTGTCGTGATAATTCTGAAAATGTAGGAACTACTGATAATCCATGGGTGAGTAGTGCCATTCGTGGAAATCAAGGATTAACTGACAATGCTTGGGAAGGTGGTCATGATAAGACTAGGGGTTGGAATGAAGGAAGGGATCATAACAATCAGTGTAGTGGTTGGAATTCTGGATGCTTACAGACAGACAAAGGATGGGGCAAAGTTAGGGATAATTCTTGGTACCACCAGAAGTCGAATAATTTGGCTAATAGTGGCAACTCTTGGGGATACAAGTCTAGTCAACAAAATGAAATTCCAATGAACACAGGATGGAGAAACAGTGGAACAAATGCGCCAAGATGGAAGCAACATGAAAAAGCTTACATTTCAAGCGATTCACAGTTTAGAAGGAATAATGGAGGTTGGAACTCTGGGAATCAGAGTTACCACCAAACGAGGGGAGGCTCTAATAGACATAATATAAGCTATAATGGATCTCAGCCTCAAAGGGATGATAATCAAACAGGTCATTACTGGAGGAGGGAGCAAAGTAGAAAAAGGGATTTTCGTGCTTAA
Protein sequence

>MsG0380012413.01.T01

MGGKESRKRREEFEEAEKEFRHDGIPLWEKKYCTLSGCVAWQKIVDSKELIYCHHNVLDWKDSGAEEAFQNAKKRYWAKVNNLPCDISLPDPDAYIEQIDWNPCIDPELIKELDNAFFTVPDEEEQENAIQYKRTKISVDGENPWECAATSVGRGFENNEVQGQNQGDCRDNSENVGTTDNPWVSSAIRGNQGLTDNAWEGGHDKTRGWNEGRDHNNQCSGWNSGCLQTDKGWGKVRDNSWYHQKSNNLANSGNSWGYKSSQQNEIPMNTGWRNSGTNAPRWKQHEKAYISSDSQFRRNNGGWNSGNQSYHQTRGGSNRHNISYNGSQPQRDDNQTGHYWRREQSRKRDFRA*