Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046561.01.T01 | XP_013458034.1 | 73.585 | 106 | 6 | 2 | 1 | 84 | 317 | 422 | 8.40E-40 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046561.01.T01 | A0A072V1R8 | 73.585 | 106 | 6 | 2 | 1 | 84 | 317 | 422 | 4.01e-40 | 146 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047790.01 | MsG0880046561.01 | -0.828744 | 7.582432e-55 | 7.603206e-52 |
| MsG0080048058.01 | MsG0880046561.01 | 0.837534 | 4.912052e-57 | 6.399670e-54 |
| MsG0080048178.01 | MsG0880046561.01 | 0.806703 | 7.232471e-50 | 3.952215e-47 |
| MsG0080048210.01 | MsG0880046561.01 | 0.804773 | 1.839298e-49 | 9.565973e-47 |
| MsG0080048461.01 | MsG0880046561.01 | 0.816426 | 5.563984e-52 | 3.941108e-49 |
| MsG0080048809.01 | MsG0880046561.01 | -0.855108 | 7.868385e-62 | 1.796504e-58 |
| MsG0080048830.01 | MsG0880046561.01 | 0.807648 | 4.561190e-50 | 2.554331e-47 |
| MsG0080048901.01 | MsG0880046561.01 | -0.808491 | 3.017821e-50 | 1.727906e-47 |
| MsG0180000116.01 | MsG0880046561.01 | 0.827116 | 1.868950e-54 | 1.787324e-51 |
| MsG0180000176.01 | MsG0880046561.01 | 0.834088 | 3.668073e-56 | 4.307445e-53 |
| MsG0180000197.01 | MsG0880046561.01 | 0.849520 | 3.067777e-60 | 5.830862e-57 |
| MsG0180000235.01 | MsG0880046561.01 | 0.812216 | 4.739569e-51 | 2.995646e-48 |
| MsG0180000400.01 | MsG0880046561.01 | -0.829776 | 4.260877e-55 | 4.404644e-52 |
| MsG0180000402.01 | MsG0880046561.01 | 0.802045 | 6.759073e-49 | 3.277870e-46 |
| MsG0180000494.01 | MsG0880046561.01 | 0.813147 | 2.965395e-51 | 1.921116e-48 |
| MsG0180000555.01 | MsG0880046561.01 | 0.842239 | 2.919375e-58 | 4.398602e-55 |
| MsG0180000585.01 | MsG0880046561.01 | 0.800837 | 1.194939e-48 | 5.620640e-46 |
| MsG0180000741.01 | MsG0880046561.01 | 0.818359 | 2.043029e-52 | 1.526014e-49 |
| MsG0180000797.01 | MsG0880046561.01 | 0.809432 | 1.898188e-50 | 1.114303e-47 |
| MsG0180000821.01 | MsG0880046561.01 | 0.855755 | 5.098516e-62 | 1.189664e-58 |
| MsG0180000822.01 | MsG0880046561.01 | 0.819094 | 1.391045e-52 | 1.060286e-49 |
| MsG0180001294.01 | MsG0880046561.01 | 0.819569 | 1.084210e-52 | 8.373993e-50 |
| MsG0180001312.01 | MsG0880046561.01 | 0.820239 | 7.618997e-53 | 5.995196e-50 |
| MsG0180001922.01 | MsG0880046561.01 | 0.807905 | 4.022277e-50 | 2.267599e-47 |
| MsG0180002075.01 | MsG0880046561.01 | 0.802579 | 5.247535e-49 | 2.579668e-46 |
| MsG0180002709.01 | MsG0880046561.01 | 0.820924 | 5.303530e-53 | 4.253598e-50 |
| MsG0880044062.01 | MsG0880046561.01 | -0.814308 | 1.645852e-51 | 1.100537e-48 |
| MsG0880044075.01 | MsG0880046561.01 | 0.814069 | 1.858783e-51 | 1.234825e-48 |
| MsG0880044346.01 | MsG0880046561.01 | 0.802746 | 4.845883e-49 | 2.392523e-46 |
| MsG0880044389.01 | MsG0880046561.01 | -0.805042 | 1.615448e-49 | 8.460060e-47 |
| MsG0880044546.01 | MsG0880046561.01 | 0.803690 | 3.091142e-49 | 1.563461e-46 |
| MsG0880044732.01 | MsG0880046561.01 | 0.804934 | 1.701930e-49 | 8.888761e-47 |
| MsG0880045106.01 | MsG0880046561.01 | 0.817143 | 3.842167e-52 | 2.775525e-49 |
| MsG0880045185.01 | MsG0880046561.01 | 0.819167 | 1.338967e-52 | 1.022596e-49 |
| MsG0880045415.01 | MsG0880046561.01 | 0.818841 | 1.588025e-52 | 1.202047e-49 |
| MsG0880045498.01 | MsG0880046561.01 | 0.821287 | 4.374034e-53 | 3.543564e-50 |
| MsG0880045639.01 | MsG0880046561.01 | 0.814350 | 1.611409e-51 | 1.078659e-48 |
| MsG0880045756.01 | MsG0880046561.01 | 0.800382 | 1.479904e-48 | 6.881162e-46 |
| MsG0880045897.01 | MsG0880046561.01 | -0.849405 | 3.301797e-60 | 6.252496e-57 |
| MsG0880045914.01 | MsG0880046561.01 | 0.885974 | 5.117562e-72 | 3.586215e-68 |
| MsG0880046027.01 | MsG0880046561.01 | 0.833658 | 4.698262e-56 | 5.446370e-53 |
| MsG0880046047.01 | MsG0880046561.01 | 0.808268 | 3.366979e-50 | 1.916666e-47 |
| MsG0880046113.01 | MsG0880046561.01 | 0.805575 | 1.249352e-49 | 6.632966e-47 |
| MsG0880046163.01 | MsG0880046561.01 | 0.843861 | 1.079645e-58 | 1.711917e-55 |
| MsG0880046244.01 | MsG0880046561.01 | 0.842482 | 2.516908e-58 | 3.821854e-55 |
| MsG0880046560.01 | MsG0880046561.01 | 0.926076 | 7.698497e-91 | 3.558611e-86 |
| MsG0880046561.01 | MsG0880046643.01 | 0.803136 | 4.026719e-49 | 2.007810e-46 |
| MsG0880046561.01 | MsG0880046684.01 | 0.850520 | 1.610255e-60 | 3.162406e-57 |
| MsG0880046561.01 | MsG0880046790.01 | 0.808791 | 2.604124e-50 | 1.502688e-47 |
| MsG0880046561.01 | MsG0880047016.01 | 0.802104 | 6.571484e-49 | 3.191706e-46 |
| MsG0880046561.01 | MsG0880047285.01 | -0.820264 | 7.518399e-53 | 5.920301e-50 |
| MsG0880046561.01 | MsG0880047391.01 | 0.858104 | 1.035929e-62 | 2.614397e-59 |
| MsG0880046561.01 | MsG0880047437.01 | 0.813462 | 2.528882e-51 | 1.652640e-48 |
| MsG0880046561.01 | MsG0880047590.01 | 0.851414 | 9.012856e-61 | 1.822976e-57 |
| MsG0880046561.01 | MsG0880047594.01 | 0.828230 | 1.008977e-54 | 9.968174e-52 |
| MsG0880046561.01 | MsG0880047606.01 | 0.802348 | 5.853705e-49 | 2.861003e-46 |
| MsG0180002796.01 | MsG0880046561.01 | 0.852927 | 3.347682e-61 | 7.108443e-58 |
| MsG0180002955.01 | MsG0880046561.01 | 0.821162 | 4.675176e-53 | 3.774472e-50 |
| MsG0180003031.01 | MsG0880046561.01 | 0.831198 | 1.912814e-55 | 2.060879e-52 |
| MsG0180003118.01 | MsG0880046561.01 | -0.804112 | 2.526109e-49 | 1.291606e-46 |
| MsG0180003190.01 | MsG0880046561.01 | 0.807840 | 4.153254e-50 | 2.337579e-47 |
| MsG0180003379.01 | MsG0880046561.01 | 0.812652 | 3.806523e-51 | 2.433894e-48 |
| MsG0180003725.01 | MsG0880046561.01 | 0.818385 | 2.015040e-52 | 1.506239e-49 |
| MsG0180003807.01 | MsG0880046561.01 | 0.829156 | 6.026557e-55 | 6.117255e-52 |
| MsG0180003810.01 | MsG0880046561.01 | 0.809809 | 1.574558e-50 | 9.336428e-48 |
| MsG0180003977.01 | MsG0880046561.01 | 0.809660 | 1.695829e-50 | 1.001592e-47 |
| MsG0180004008.01 | MsG0880046561.01 | 0.808435 | 3.101122e-50 | 1.773082e-47 |
| MsG0180004085.01 | MsG0880046561.01 | 0.814964 | 1.177905e-51 | 8.016591e-49 |
| MsG0180004372.01 | MsG0880046561.01 | 0.802638 | 5.101803e-49 | 2.511826e-46 |
| MsG0180004449.01 | MsG0880046561.01 | 0.803714 | 3.055743e-49 | 1.546463e-46 |
| MsG0180004486.01 | MsG0880046561.01 | 0.840960 | 6.347991e-58 | 9.189487e-55 |
| MsG0180004598.01 | MsG0880046561.01 | 0.803880 | 2.822491e-49 | 1.434620e-46 |
| MsG0180004599.01 | MsG0880046561.01 | 0.809583 | 1.760928e-50 | 1.037957e-47 |
| MsG0180004645.01 | MsG0880046561.01 | 0.814381 | 1.585791e-51 | 1.062463e-48 |
| MsG0180004689.01 | MsG0880046561.01 | 0.862924 | 3.590875e-64 | 1.069612e-60 |
| MsG0180004793.01 | MsG0880046561.01 | 0.805530 | 1.277018e-49 | 6.771833e-47 |
| MsG0180004843.01 | MsG0880046561.01 | 0.839795 | 1.279914e-57 | 1.787008e-54 |
| MsG0180004853.01 | MsG0880046561.01 | 0.822418 | 2.394496e-53 | 2.003116e-50 |
| MsG0180005049.01 | MsG0880046561.01 | 0.815747 | 7.891645e-52 | 5.487560e-49 |
| MsG0180005125.01 | MsG0880046561.01 | 0.813550 | 2.418477e-51 | 1.584227e-48 |
| MsG0180005185.01 | MsG0880046561.01 | 0.802989 | 4.316811e-49 | 2.144391e-46 |
| MsG0180005228.01 | MsG0880046561.01 | 0.810361 | 1.197590e-50 | 7.204202e-48 |
| MsG0180005354.01 | MsG0880046561.01 | 0.871333 | 7.404987e-67 | 2.975948e-63 |
| MsG0180005398.01 | MsG0880046561.01 | 0.844648 | 6.635783e-59 | 1.078360e-55 |
| MsG0180005443.01 | MsG0880046561.01 | 0.824085 | 9.771485e-54 | 8.568397e-51 |
| MsG0180005445.01 | MsG0880046561.01 | 0.828630 | 8.078758e-55 | 8.074927e-52 |
| MsG0180005451.01 | MsG0880046561.01 | 0.825793 | 3.861276e-54 | 3.555540e-51 |
| MsG0180005493.01 | MsG0880046561.01 | 0.871819 | 5.111020e-67 | 2.090130e-63 |
| MsG0180005507.01 | MsG0880046561.01 | 0.846579 | 1.987658e-59 | 3.436837e-56 |
| MsG0180005765.01 | MsG0880046561.01 | 0.835818 | 1.344312e-56 | 1.662692e-53 |
| MsG0180005773.01 | MsG0880046561.01 | 0.819710 | 1.006724e-52 | 7.806174e-50 |
| MsG0180005786.01 | MsG0880046561.01 | 0.824525 | 7.700264e-54 | 6.837794e-51 |
| MsG0180005944.01 | MsG0880046561.01 | 0.819391 | 1.190185e-52 | 9.146347e-50 |
| MsG0180005949.01 | MsG0880046561.01 | 0.816821 | 4.538448e-52 | 3.249740e-49 |
| MsG0180006106.01 | MsG0880046561.01 | 0.814413 | 1.560576e-51 | 1.046482e-48 |
| MsG0180006243.01 | MsG0880046561.01 | 0.829898 | 3.978704e-55 | 4.127322e-52 |
| MsG0280006368.01 | MsG0880046561.01 | 0.823617 | 1.257618e-53 | 1.088389e-50 |
| MsG0780040254.01 | MsG0880046561.01 | 0.873072 | 1.950824e-67 | 8.354746e-64 |
| MsG0780040375.01 | MsG0880046561.01 | -0.810513 | 1.110420e-50 | 6.706677e-48 |
| MsG0780040389.01 | MsG0880046561.01 | 0.855912 | 4.588125e-62 | 1.076072e-58 |
| MsG0780040516.01 | MsG0880046561.01 | 0.876095 | 1.833821e-68 | 8.777163e-65 |
| MsG0780040712.01 | MsG0880046561.01 | 0.823908 | 1.075210e-53 | 9.381896e-51 |
| MsG0780040742.01 | MsG0880046561.01 | 0.834379 | 3.101395e-56 | 3.674127e-53 |
| MsG0780040758.01 | MsG0880046561.01 | 0.820588 | 6.336789e-53 | 5.034456e-50 |
| MsG0780040788.01 | MsG0880046561.01 | 0.801321 | 9.516908e-49 | 4.531511e-46 |
| MsG0780040947.01 | MsG0880046561.01 | 0.836406 | 9.533760e-57 | 1.200279e-53 |
| MsG0780041161.01 | MsG0880046561.01 | 0.817424 | 3.321469e-52 | 2.418048e-49 |
| MsG0780041220.01 | MsG0880046561.01 | 0.807502 | 4.898780e-50 | 2.733174e-47 |
| MsG0780041310.01 | MsG0880046561.01 | 0.800125 | 1.668559e-48 | 7.707894e-46 |
| MsG0780041368.01 | MsG0880046561.01 | 0.817481 | 3.225261e-52 | 2.351621e-49 |
| MsG0780041370.01 | MsG0880046561.01 | 0.842776 | 2.103523e-58 | 3.223008e-55 |
| MsG0780041376.01 | MsG0880046561.01 | 0.837202 | 5.972279e-57 | 7.701435e-54 |
| MsG0780041432.01 | MsG0880046561.01 | 0.850651 | 1.479450e-60 | 2.918323e-57 |
| MsG0780041469.01 | MsG0880046561.01 | 0.830939 | 2.213455e-55 | 2.366757e-52 |
| MsG0780041498.01 | MsG0880046561.01 | 0.861955 | 7.130986e-64 | 2.053282e-60 |
| MsG0780041671.01 | MsG0880046561.01 | 0.814070 | 1.857594e-51 | 1.234076e-48 |
| MsG0780041754.01 | MsG0880046561.01 | 0.812390 | 4.343048e-51 | 2.757929e-48 |
| MsG0880042151.01 | MsG0880046561.01 | 0.831906 | 1.279964e-55 | 1.408558e-52 |
| MsG0880042206.01 | MsG0880046561.01 | 0.823296 | 1.494818e-53 | 1.281924e-50 |
| MsG0880042219.01 | MsG0880046561.01 | -0.816058 | 6.726377e-52 | 4.717052e-49 |
| MsG0880042223.01 | MsG0880046561.01 | 0.821675 | 3.558493e-53 | 2.914424e-50 |
| MsG0880042329.01 | MsG0880046561.01 | 0.827538 | 1.480761e-54 | 1.433595e-51 |
| MsG0880042553.01 | MsG0880046561.01 | -0.804729 | 1.878582e-49 | 9.759545e-47 |
| MsG0880042743.01 | MsG0880046561.01 | 0.844774 | 6.136702e-59 | 1.001313e-55 |
| MsG0880042792.01 | MsG0880046561.01 | 0.850563 | 1.566257e-60 | 3.080501e-57 |
| MsG0880042811.01 | MsG0880046561.01 | 0.800274 | 1.556351e-48 | 7.216656e-46 |
| MsG0880042829.01 | MsG0880046561.01 | 0.803161 | 3.978687e-49 | 1.985209e-46 |
| MsG0880043059.01 | MsG0880046561.01 | 0.829226 | 5.793777e-55 | 5.893520e-52 |
| MsG0880043082.01 | MsG0880046561.01 | 0.816006 | 6.907348e-52 | 4.836927e-49 |
| MsG0880043116.01 | MsG0880046561.01 | 0.836436 | 9.370885e-57 | 1.180875e-53 |
| MsG0880043162.01 | MsG0880046561.01 | 0.817531 | 3.142057e-52 | 2.294023e-49 |
| MsG0880043172.01 | MsG0880046561.01 | 0.803244 | 3.824164e-49 | 1.912134e-46 |
| MsG0880043194.01 | MsG0880046561.01 | 0.834164 | 3.512147e-56 | 4.133293e-53 |
| MsG0880043341.01 | MsG0880046561.01 | 0.828530 | 8.543434e-55 | 8.514546e-52 |
| MsG0880043489.01 | MsG0880046561.01 | 0.890277 | 1.139034e-73 | 9.515546e-70 |
| MsG0880043522.01 | MsG0880046561.01 | 0.816928 | 4.294466e-52 | 3.084130e-49 |
| MsG0880043532.01 | MsG0880046561.01 | 0.813899 | 2.026400e-51 | 1.339969e-48 |
| MsG0880043804.01 | MsG0880046561.01 | 0.878529 | 2.608570e-69 | 1.366797e-65 |
| MsG0880043886.01 | MsG0880046561.01 | 0.809225 | 2.102042e-50 | 1.227218e-47 |
| MsG0280010560.01 | MsG0880046561.01 | 0.845593 | 3.686545e-59 | 6.173900e-56 |
| MsG0280010599.01 | MsG0880046561.01 | 0.814233 | 1.710050e-51 | 1.141079e-48 |
| MsG0280010614.01 | MsG0880046561.01 | 0.806251 | 9.005321e-50 | 4.864824e-47 |
| MsG0280010648.01 | MsG0880046561.01 | 0.802552 | 5.314200e-49 | 2.610691e-46 |
| MsG0280010784.01 | MsG0880046561.01 | 0.820524 | 6.555665e-53 | 5.199162e-50 |
| MsG0280010816.01 | MsG0880046561.01 | 0.872602 | 2.803218e-67 | 1.180156e-63 |
| MsG0280010901.01 | MsG0880046561.01 | 0.850154 | 2.040406e-60 | 3.959784e-57 |
| MsG0280010976.01 | MsG0880046561.01 | 0.863579 | 2.250297e-64 | 6.855019e-61 |
| MsG0280011043.01 | MsG0880046561.01 | 0.836650 | 8.265249e-57 | 1.048101e-53 |
| MsG0280011052.01 | MsG0880046561.01 | 0.820006 | 8.613029e-53 | 6.734255e-50 |
| MsG0280011105.01 | MsG0880046561.01 | 0.847079 | 1.450573e-59 | 2.549046e-56 |
| MsG0280011235.01 | MsG0880046561.01 | 0.855519 | 5.975407e-62 | 1.383161e-58 |
| MsG0280011293.01 | MsG0880046561.01 | 0.812138 | 4.929166e-51 | 3.108809e-48 |
| MsG0280011334.01 | MsG0880046561.01 | 0.880124 | 7.106840e-70 | 3.957233e-66 |
| MsG0280011410.01 | MsG0880046561.01 | 0.862154 | 6.196438e-64 | 1.796755e-60 |
| MsG0380011663.01 | MsG0880046561.01 | 0.818093 | 2.346471e-52 | 1.739678e-49 |
| MsG0380011729.01 | MsG0880046561.01 | 0.870874 | 1.048974e-66 | 4.146103e-63 |
| MsG0380011754.01 | MsG0880046561.01 | 0.823878 | 1.092900e-53 | 9.528286e-51 |
| MsG0380012020.01 | MsG0880046561.01 | 0.857214 | 1.901634e-62 | 4.658258e-59 |
| MsG0380012057.01 | MsG0880046561.01 | 0.869790 | 2.377056e-66 | 9.032257e-63 |
| MsG0380012279.01 | MsG0880046561.01 | -0.804015 | 2.646198e-49 | 1.349651e-46 |
| MsG0380012413.01 | MsG0880046561.01 | 0.814525 | 1.473983e-51 | 9.913879e-49 |
| MsG0380012458.01 | MsG0880046561.01 | 0.868329 | 7.080918e-66 | 2.551089e-62 |
| MsG0380012872.01 | MsG0880046561.01 | 0.835083 | 2.062703e-56 | 2.495399e-53 |
| MsG0380014118.01 | MsG0880046561.01 | 0.809241 | 2.085992e-50 | 1.218378e-47 |
| MsG0380014551.01 | MsG0880046561.01 | -0.825297 | 5.061989e-54 | 4.595474e-51 |
| MsG0380014576.01 | MsG0880046561.01 | 0.806934 | 6.462788e-50 | 3.552818e-47 |
| MsG0380014701.01 | MsG0880046561.01 | 0.810979 | 8.802634e-51 | 5.384000e-48 |
| MsG0380014866.01 | MsG0880046561.01 | 0.819012 | 1.451864e-52 | 1.104248e-49 |
| MsG0380014908.01 | MsG0880046561.01 | 0.823034 | 1.721319e-53 | 1.465395e-50 |
| MsG0380014913.01 | MsG0880046561.01 | 0.863554 | 2.291159e-64 | 6.973338e-61 |
| MsG0680030841.01 | MsG0880046561.01 | 0.804125 | 2.509695e-49 | 1.283649e-46 |
| MsG0680031301.01 | MsG0880046561.01 | 0.813517 | 2.459486e-51 | 1.609610e-48 |
| MsG0680031538.01 | MsG0880046561.01 | 0.835264 | 1.856412e-56 | 2.258503e-53 |
| MsG0680034037.01 | MsG0880046561.01 | 0.820092 | 8.231704e-53 | 6.452025e-50 |
| MsG0680034067.01 | MsG0880046561.01 | 0.805327 | 1.408335e-49 | 7.429628e-47 |
| MsG0680034757.01 | MsG0880046561.01 | 0.850194 | 1.988031e-60 | 3.863114e-57 |
| MsG0680035340.01 | MsG0880046561.01 | 0.843519 | 1.333282e-58 | 2.091327e-55 |
| MsG0680035656.01 | MsG0880046561.01 | 0.816026 | 6.836160e-52 | 4.789835e-49 |
| MsG0480018479.01 | MsG0880046561.01 | 0.834635 | 2.673672e-56 | 3.191634e-53 |
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| MsG0780036548.01 | MsG0880046561.01 | 0.877794 | 4.722707e-69 | 2.406117e-65 |
| MsG0780036609.01 | MsG0880046561.01 | 0.804251 | 2.362411e-49 | 1.212167e-46 |
| MsG0780036630.01 | MsG0880046561.01 | 0.915054 | 9.275092e-85 | 2.378791e-80 |
| MsG0780036633.01 | MsG0880046561.01 | 0.884475 | 1.858555e-71 | 1.227661e-67 |
| MsG0780036635.01 | MsG0880046561.01 | 0.911647 | 4.796506e-83 | 1.037974e-78 |
| MsG0780036773.01 | MsG0880046561.01 | 0.856048 | 4.186401e-62 | 9.862873e-59 |
| MsG0780036845.01 | MsG0880046561.01 | 0.850133 | 2.067103e-60 | 4.008585e-57 |
| MsG0780037287.01 | MsG0880046561.01 | 0.831727 | 1.416974e-55 | 1.551129e-52 |
| MsG0780037630.01 | MsG0880046561.01 | 0.828645 | 8.014282e-55 | 8.013840e-52 |
| MsG0780037975.01 | MsG0880046561.01 | 0.831049 | 2.080551e-55 | 2.231830e-52 |
| MsG0780038092.01 | MsG0880046561.01 | 0.843608 | 1.261893e-58 | 1.985064e-55 |
| MsG0780038117.01 | MsG0880046561.01 | 0.837576 | 4.790676e-57 | 6.249680e-54 |
| MsG0780038323.01 | MsG0880046561.01 | 0.844889 | 5.714817e-59 | 9.357783e-56 |
| MsG0780038644.01 | MsG0880046561.01 | 0.853509 | 2.280340e-61 | 4.939107e-58 |
| MsG0780039405.01 | MsG0880046561.01 | 0.811531 | 6.681141e-51 | 4.145964e-48 |
| MsG0780039717.01 | MsG0880046561.01 | 0.800675 | 1.289741e-48 | 6.041591e-46 |
| MsG0780039777.01 | MsG0880046561.01 | 0.840237 | 9.813870e-58 | 1.389291e-54 |
| MsG0780039896.01 | MsG0880046561.01 | 0.816254 | 6.079633e-52 | 4.286485e-49 |
| MsG0780039952.01 | MsG0880046561.01 | 0.813857 | 2.070008e-51 | 1.367215e-48 |
| MsG0780040176.01 | MsG0880046561.01 | 0.907568 | 4.400813e-81 | 7.851240e-77 |
| MsG0780040182.01 | MsG0880046561.01 | 0.852051 | 5.949956e-61 | 1.228070e-57 |
| MsG0780040190.01 | MsG0880046561.01 | 0.817238 | 3.658330e-52 | 2.649560e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046561.01.T01 | MTR_4g110100 | 73.585 | 106 | 6 | 2 | 1 | 84 | 317 | 422 | 1.02e-43 | 146 |
| MsG0880046561.01.T01 | MTR_7g074170 | 35.238 | 105 | 46 | 2 | 2 | 84 | 303 | 407 | 1.48e-14 | 67.4 |
| MsG0880046561.01.T01 | MTR_6g016350 | 39.048 | 105 | 42 | 1 | 1 | 83 | 268 | 372 | 5.75e-14 | 65.5 |
| MsG0880046561.01.T01 | MTR_6g079660 | 37.113 | 97 | 39 | 1 | 2 | 76 | 193 | 289 | 1.77e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046561.01.T01 | AT5G08139 | 43.434 | 99 | 34 | 2 | 1 | 77 | 266 | 364 | 4.84e-18 | 77.0 |
| MsG0880046561.01.T01 | AT3G02340 | 36.364 | 99 | 41 | 1 | 2 | 78 | 293 | 391 | 2.52e-16 | 72.4 |
| MsG0880046561.01.T01 | AT3G02340 | 36.364 | 99 | 41 | 1 | 2 | 78 | 293 | 391 | 2.52e-16 | 72.4 |
| MsG0880046561.01.T01 | AT5G15820 | 34.694 | 98 | 42 | 1 | 2 | 77 | 249 | 346 | 3.26e-14 | 66.2 |
| MsG0880046561.01.T01 | AT5G01980 | 37.255 | 102 | 41 | 3 | 2 | 81 | 309 | 409 | 8.68e-13 | 62.4 |
Find 21 sgRNAs with CRISPR-Local
Find 61 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAGAAGCCGGTGGCTTAC+TGG | 0.359157 | 8:-74915987 | None:intergenic |
| AAGTGCTCCGAGCCAACATT+GGG | 0.417324 | 8:-74916594 | None:intergenic |
| GGAAACTCACAGCGACAAAC+AGG | 0.463610 | 8:-74916538 | None:intergenic |
| CAAGTGCTCCGAGCCAACAT+TGG | 0.495300 | 8:-74916595 | None:intergenic |
| TTCGTTTACCAGTAAGCCAC+CGG | 0.508581 | 8:+74915979 | MsG0880046561.01.T01:CDS |
| GCGGAGTATGAGATGATGTT+TGG | 0.518188 | 8:+74915935 | None:intergenic |
| TTGTAAGATGAATTTGCTGT+TGG | 0.543992 | 8:+74916084 | MsG0880046561.01.T01:CDS |
| GATGATGTTTGGTCAATTCG+CGG | 0.544306 | 8:+74915946 | None:intergenic |
| TCAACAAACGCTACAGAAGC+CGG | 0.552415 | 8:-74915998 | None:intergenic |
| TGTTGAGAATCTTCCGTCGG+TGG | 0.555357 | 8:+74916015 | MsG0880046561.01.T01:CDS |
| TGAATTTGCTGTTGGAGAAG+AGG | 0.578557 | 8:+74916092 | MsG0880046561.01.T01:CDS |
| GGAAAGCCCCAATGTTGGCT+CGG | 0.582098 | 8:+74916587 | MsG0880046561.01.T01:CDS |
| TCATAATCAGCATCATCAGT+AGG | 0.603013 | 8:-74916559 | None:intergenic |
| GGTTGTGACTAAAGAGGACG+TGG | 0.612162 | 8:+74916036 | MsG0880046561.01.T01:CDS |
| GTCGGTGGTTGTGACTAAAG+AGG | 0.623252 | 8:+74916030 | MsG0880046561.01.T01:CDS |
| TCTTTAGTCACAACCACCGA+CGG | 0.649000 | 8:-74916028 | None:intergenic |
| GTTTGTTGAGAATCTTCCGT+CGG | 0.653060 | 8:+74916012 | MsG0880046561.01.T01:CDS |
| ACGTAGGAAAGCCCCAATGT+TGG | 0.654719 | 8:+74916582 | MsG0880046561.01.T01:CDS |
| AGTGCTCCGAGCCAACATTG+GGG | 0.718946 | 8:-74916593 | None:intergenic |
| ATGATGCTGATTATGAACGT+AGG | 0.726355 | 8:+74916566 | MsG0880046561.01.T01:CDS |
| ACAAACGCTACAGAAGCCGG+TGG | 0.728119 | 8:-74915995 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TGCAGTTTGTAAAGATGAAT+TGG | + | Chr8:74916429-74916448 | MsG0880046561.01.T01:intron | 30.0% | |
| ! | TGATTGTATTATGCCTTGTT+GGG | + | Chr8:74916499-74916518 | MsG0880046561.01.T01:intron | 30.0% |
| !! | TTGTAAGATGAATTTGCTGT+TGG | + | Chr8:74916084-74916103 | MsG0880046561.01.T01:CDS | 30.0% |
| ATGGTGATTGTATTATGCCT+TGG | + | Chr8:74916145-74916164 | MsG0880046561.01.T01:intron | 35.0% | |
| ATTGTATTATGCCTTGGTTG+GGG | + | Chr8:74916151-74916170 | MsG0880046561.01.T01:intron | 35.0% | |
| CACATGATATCGATGAGAAA+CGG | - | Chr8:74916481-74916500 | None:intergenic | 35.0% | |
| GAACTTCACCTGATAAGTTT+AGG | - | Chr8:74916213-74916232 | None:intergenic | 35.0% | |
| GATTGTATTATGCCTTGGTT+GGG | + | Chr8:74916150-74916169 | MsG0880046561.01.T01:intron | 35.0% | |
| GTGAGTTTCCTAAACTTATC+AGG | + | Chr8:74916202-74916221 | MsG0880046561.01.T01:intron | 35.0% | |
| GTGATTGTATTATGCCTTGT+TGG | + | Chr8:74916498-74916517 | MsG0880046561.01.T01:intron | 35.0% | |
| TCATAATCAGCATCATCAGT+AGG | - | Chr8:74916562-74916581 | None:intergenic | 35.0% | |
| TGATTGTATTATGCCTTGGT+TGG | + | Chr8:74916149-74916168 | MsG0880046561.01.T01:intron | 35.0% | |
| TGTAAAGATGAATTGGCTGT+TGG | + | Chr8:74916436-74916455 | MsG0880046561.01.T01:intron | 35.0% | |
| ! | ATGATGCTGATTATGAACGT+AGG | + | Chr8:74916566-74916585 | MsG0880046561.01.T01:CDS | 35.0% |
| ! | GATTGTATTATGCCTTGTTG+GGG | + | Chr8:74916500-74916519 | MsG0880046561.01.T01:intron | 35.0% |
| AGTATTCCTAATCCCCAACA+AGG | - | Chr8:74916515-74916534 | None:intergenic | 40.0% | |
| ATGATGACAAGAAGACACTG+CGG | + | Chr8:74916257-74916276 | MsG0880046561.01.T01:intron | 40.0% | |
| ATTCGAGAACGTTTACCAGT+CGG | + | Chr8:74916360-74916379 | MsG0880046561.01.T01:intron | 40.0% | |
| CATCATTGTCCCCAAAAATC+CGG | - | Chr8:74916240-74916259 | None:intergenic | 40.0% | |
| CCATGATATCGATGAGAACA+CGG | - | Chr8:74916129-74916148 | None:intergenic | 40.0% | |
| GTTGTTATCCAGTCCTCTTA+CGG | - | Chr8:74916398-74916417 | None:intergenic | 40.0% | |
| ! | AAGTTCAGAGCCGGATTTTT+GGG | + | Chr8:74916227-74916246 | MsG0880046561.01.T01:intron | 40.0% |
| ! | ATTATGCCTTGTTGGGGATT+AGG | + | Chr8:74916506-74916525 | MsG0880046561.01.T01:intron | 40.0% |
| ! | GTTTGTTGAGAATCTTCCGT+CGG | + | Chr8:74916012-74916031 | MsG0880046561.01.T01:CDS | 40.0% |
| !! | TGAATTTGCTGTTGGAGAAG+AGG | + | Chr8:74916092-74916111 | MsG0880046561.01.T01:CDS | 40.0% |
| ATTGACAAACATCTCAGCCG+CGG | - | Chr8:74916342-74916361 | None:intergenic | 45.0% | |
| CCGTGTTCTCATCGATATCA+TGG | + | Chr8:74916126-74916145 | MsG0880046561.01.T01:intron | 45.0% | |
| GTATTCCTAATCCCCAACCA+AGG | - | Chr8:74916165-74916184 | None:intergenic | 45.0% | |
| TATCAGGTGAAGTTCAGAGC+CGG | + | Chr8:74916218-74916237 | MsG0880046561.01.T01:intron | 45.0% | |
| TCAACAAACGCTACAGAAGC+CGG | - | Chr8:74916001-74916020 | None:intergenic | 45.0% | |
| TCGTTTACAAGTAACCACCG+CGG | + | Chr8:74916322-74916341 | MsG0880046561.01.T01:intron | 45.0% | |
| TCTTTAGTCACAACCACCGA+CGG | - | Chr8:74916031-74916050 | None:intergenic | 45.0% | |
| TGAATTGGCTGTTGGAGAAG+AGG | + | Chr8:74916444-74916463 | MsG0880046561.01.T01:intron | 45.0% | |
| TTATGCCTTGGTTGGGGATT+AGG | + | Chr8:74916157-74916176 | MsG0880046561.01.T01:intron | 45.0% | |
| TTCGAGAACGTTTACCAGTC+GGG | + | Chr8:74916361-74916380 | MsG0880046561.01.T01:intron | 45.0% | |
| TTCGTTTACCAGTAAGCCAC+CGG | + | Chr8:74915979-74915998 | MsG0880046561.01.T01:CDS | 45.0% | |
| ! | AGTTCAGAGCCGGATTTTTG+GGG | + | Chr8:74916228-74916247 | MsG0880046561.01.T01:intron | 45.0% |
| ! | GAAGTTCAGAGCCGGATTTT+TGG | + | Chr8:74916226-74916245 | MsG0880046561.01.T01:intron | 45.0% |
| AAGTGCTCCGAGCCAACATT+GGG | - | Chr8:74916597-74916616 | None:intergenic | 50.0% | |
| ACAAGAAGACACTGCGGAGT+AGG | + | Chr8:74916263-74916282 | MsG0880046561.01.T01:intron | 50.0% | |
| ACGTAGGAAAGCCCCAATGT+TGG | + | Chr8:74916582-74916601 | MsG0880046561.01.T01:CDS | 50.0% | |
| GGAAACTCACAGCGACAAAC+AGG | - | Chr8:74916192-74916211 | None:intergenic | 50.0% | |
| GGTTGTGACTAAAGAGGACG+TGG | + | Chr8:74916036-74916055 | MsG0880046561.01.T01:CDS | 50.0% | |
| GTCGGTGGTTGTGACTAAAG+AGG | + | Chr8:74916030-74916049 | MsG0880046561.01.T01:CDS | 50.0% | |
| TCGAGAACGTTTACCAGTCG+GGG | + | Chr8:74916362-74916381 | MsG0880046561.01.T01:intron | 50.0% | |
| TGTTGAGAATCTTCCGTCGG+TGG | + | Chr8:74916015-74916034 | MsG0880046561.01.T01:CDS | 50.0% | |
| !! | ATGATGGTGGGTCACAATCG+CGG | + | Chr8:74916288-74916307 | MsG0880046561.01.T01:intron | 50.0% |
| ACAAACGCTACAGAAGCCGG+TGG | - | Chr8:74915998-74916017 | None:intergenic | 55.0% | |
| ACGTTTACCAGTCGGGGTTG+TGG | + | Chr8:74916368-74916387 | MsG0880046561.01.T01:intron | 55.0% | |
| AGTGCTCCGAGCCAACATTG+GGG | - | Chr8:74916596-74916615 | None:intergenic | 55.0% | |
| CAAGTGCTCCGAGCCAACAT+TGG | - | Chr8:74916598-74916617 | None:intergenic | 55.0% | |
| CACTGCGGAGTAGGAGATGA+TGG | + | Chr8:74916272-74916291 | MsG0880046561.01.T01:intron | 55.0% | |
| GGGTTGTGGACTTCCGTAAG+AGG | + | Chr8:74916382-74916401 | MsG0880046561.01.T01:intron | 55.0% | |
| GTGGACTTCCGTAAGAGGAC+TGG | + | Chr8:74916387-74916406 | MsG0880046561.01.T01:intron | 55.0% | |
| TACAGAAGCCGGTGGCTTAC+TGG | - | Chr8:74915990-74916009 | None:intergenic | 55.0% | |
| TGGCTGTTGGAGAAGAGGTG+AGG | + | Chr8:74916449-74916468 | MsG0880046561.01.T01:intron | 55.0% | |
| ! | GCGGAGTAGGAGATGATGGT+GGG | + | Chr8:74916276-74916295 | MsG0880046561.01.T01:intron | 55.0% |
| ! | GGAAAGCCCCAATGTTGGCT+CGG | + | Chr8:74916587-74916606 | MsG0880046561.01.T01:CDS | 55.0% |
| ! | TGCGGAGTAGGAGATGATGG+TGG | + | Chr8:74916275-74916294 | MsG0880046561.01.T01:intron | 55.0% |
| GACAAACATCTCAGCCGCGG+TGG | - | Chr8:74916339-74916358 | None:intergenic | 60.0% | |
| CGGAAGTCCACAACCCCGAC+TGG | - | Chr8:74916378-74916397 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 74915947 | 74916618 | 74915947 | ID=MsG0880046561.01;Name=MsG0880046561.01 |
| Chr8 | mRNA | 74915947 | 74916618 | 74915947 | ID=MsG0880046561.01.T01;Parent=MsG0880046561.01;Name=MsG0880046561.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|1|2|0|85 |
| Chr8 | exon | 74915947 | 74916113 | 74915947 | ID=MsG0880046561.01.T01:exon:31359;Parent=MsG0880046561.01.T01 |
| Chr8 | exon | 74916528 | 74916618 | 74916528 | ID=MsG0880046561.01.T01:exon:31360;Parent=MsG0880046561.01.T01 |
| Chr8 | CDS | 74915947 | 74916113 | 74915947 | ID=MsG0880046561.01.T01:cds;Parent=MsG0880046561.01.T01 |
| Chr8 | CDS | 74916528 | 74916618 | 74916528 | ID=MsG0880046561.01.T01:cds;Parent=MsG0880046561.01.T01 |
| Gene Sequence |
| Protein sequence |
