AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005451.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005451.01.T01 MTR_1g100633 97.239 833 22 1 35 867 22 853 0.0 1635
MsG0180005451.01.T01 MTR_1g100633 97.005 768 22 1 35 802 22 788 0.0 1510
MsG0180005451.01.T01 MTR_1g100633 96.950 754 22 1 35 788 22 774 0.0 1479
MsG0180005451.01.T01 MTR_8g097350 36.176 774 407 12 5 711 2 755 1.53e-131 419
MsG0180005451.01.T01 MTR_8g097350 35.417 192 93 4 704 866 842 1031 1.04e-16 85.5
MsG0180005451.01.T01 MTR_8g097350 36.036 777 407 12 5 711 2 758 5.04e-131 417
MsG0180005451.01.T01 MTR_5g010520 35.550 782 428 13 27 740 16 789 1.17e-127 407
MsG0180005451.01.T01 MTR_5g010520 35.550 782 428 13 27 740 16 789 1.95e-126 407
MsG0180005451.01.T01 MTR_5g010520 72.727 55 15 0 812 866 1007 1061 6.13e-15 80.1
MsG0180005451.01.T01 MTR_0415s0010 41.277 235 120 5 204 432 51 273 2.79e-37 142
MsG0180005451.01.T01 MTR_0415s0020 39.623 212 128 0 500 711 16 227 8.05e-35 136
MsG0180005451.01.T01 MTR_3g073620 26.902 368 202 8 35 343 25 384 1.06e-30 131
MsG0180005451.01.T01 MTR_1g062200 26.697 442 241 10 37 426 28 438 1.36e-23 108
MsG0180005451.01.T01 MTR_1g062200 26.697 442 241 10 37 426 28 438 2.05e-23 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005451.01.T01 AT5G52280 42.342 888 398 18 35 866 23 852 0.0 558
MsG0180005451.01.T01 AT5G41140 36.074 973 465 23 35 866 26 982 9.06e-145 453
MsG0180005451.01.T01 AT5G41140 35.971 973 459 22 35 866 26 975 4.75e-144 451
MsG0180005451.01.T01 AT1G63300 38.259 758 416 14 35 745 25 777 2.70e-128 411
MsG0180005451.01.T01 AT1G22060 25.487 667 396 16 35 629 25 662 8.77e-33 138
MsG0180005451.01.T01 AT1G22060 25.487 667 396 16 35 629 25 662 8.77e-33 138

Find 168 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGCTCTTGATTGCATTTC+TGG 0.028652 1:+91996171 None:intergenic
TGATGCTTTGATTGAGAATT+TGG 0.128846 1:-91994470 MsG0180005451.01.T01:three_prime_UTR
CTCAAATTCTGAACTTCTTT+TGG 0.164026 1:-91996909 MsG0180005451.01.T01:CDS
TTCAAGATGGGACTTGTTTA+TGG 0.179533 1:-91998740 MsG0180005451.01.T01:CDS
GCCCTTGAAATTTGCAAATT+CGG 0.204924 1:-91998446 MsG0180005451.01.T01:CDS
TGAAAATCAAGTTAAGTCTT+TGG 0.245483 1:-91996471 MsG0180005451.01.T01:CDS
CCCTTGAAATTTGCAAATTC+GGG 0.262697 1:-91998445 MsG0180005451.01.T01:CDS
TATTCGTGTTCCTTTCCTTT+AGG 0.264361 1:+91994959 None:intergenic
TTGAATCTGTTAAACTTGTT+AGG 0.276431 1:-91998704 MsG0180005451.01.T01:CDS
AATTCTCAATTTCACTATTC+TGG 0.284871 1:+91996747 None:intergenic
CAGGGACTCTTCTGCTTGAA+TGG 0.294165 1:+91996364 None:intergenic
GAGTTCTGTCTGAAGCTATA+AGG 0.304087 1:+91997460 None:intergenic
ACAAAAGAATAAGGAAATAT+TGG 0.304705 1:-91996858 MsG0180005451.01.T01:CDS
CTTGTTAGGGATTCAAAATC+AGG 0.313625 1:-91998690 MsG0180005451.01.T01:CDS
TTGTAGGGTTCTTCAAAATC+TGG 0.322934 1:-91998538 MsG0180005451.01.T01:intron
TATTGTGTCTCGTCTTTCTC+AGG 0.325981 1:+91996345 None:intergenic
AAAGGAAAGGAACACGAATA+TGG 0.334534 1:-91994956 MsG0180005451.01.T01:CDS
GAATGCATTGATGGTATCTT+TGG 0.340165 1:-91998811 MsG0180005451.01.T01:CDS
AAGGGCAGAGAAACAGTAAT+TGG 0.340819 1:+91998463 None:intergenic
AATGCTAGAACAAAAGAATA+AGG 0.342812 1:-91996867 MsG0180005451.01.T01:CDS
AGTTGATGTACAGGATAAAT+AGG 0.345911 1:+91994682 None:intergenic
CTGTACTGCCATAGCTCAAT+TGG 0.348542 1:+91997782 None:intergenic
TTCTTCAAAATCTGGCTACT+TGG 0.349811 1:-91998530 MsG0180005451.01.T01:CDS
TATGATGTTGTAGCCTCATA+TGG 0.360562 1:-91994565 MsG0180005451.01.T01:three_prime_UTR
TCAGCATCAGATGGAAGTTT+AGG 0.361910 1:-91997355 MsG0180005451.01.T01:CDS
TCAGTCCTGGGGTAGCTTCA+TGG 0.364313 1:-91997489 MsG0180005451.01.T01:CDS
TTTGTTCTAGCATTGCTTCA+AGG 0.366988 1:+91996876 None:intergenic
CATTCAATAATTCCTTTGTA+AGG 0.376479 1:+91994992 None:intergenic
CAGATGGAAGTTTAGGTGAT+TGG 0.379221 1:-91997348 MsG0180005451.01.T01:CDS
TCAAGATGGGACTTGTTTAT+GGG 0.381612 1:-91998739 MsG0180005451.01.T01:CDS
GCCTCAACTGTTCCTCTTGG+TGG 0.382303 1:+91997433 None:intergenic
TATCGCATCTGAGCAGCTTC+AGG 0.385097 1:-91996318 MsG0180005451.01.T01:CDS
CACAAAATCAAGTGCATAAG+AGG 0.388926 1:-91997402 MsG0180005451.01.T01:CDS
GTTTCATACCAATCATATAC+AGG 0.389633 1:-91994789 MsG0180005451.01.T01:three_prime_UTR
GCTTCAGTTAGATGCAATAA+AGG 0.391713 1:-91996996 MsG0180005451.01.T01:CDS
GAAGAGGCAGGCAGAATTAT+CGG 0.394976 1:-91997227 MsG0180005451.01.T01:CDS
GCGGAACCACAACAGGCTTA+TGG 0.395493 1:-91996204 MsG0180005451.01.T01:CDS
CAAGACAAATCAACGGTCTC+AGG 0.396783 1:-91997141 MsG0180005451.01.T01:CDS
GAAGAACTAGAACTCTTTGC+AGG 0.398652 1:-91994818 MsG0180005451.01.T01:exon
TGAATCTGTTAAACTTGTTA+GGG 0.399721 1:-91998703 MsG0180005451.01.T01:CDS
GGAAACTGAACTGAAAGAAA+TGG 0.401729 1:-91994935 MsG0180005451.01.T01:CDS
TACTATTATTGAAGTTCTGT+TGG 0.406650 1:+91997074 None:intergenic
TATTGGATCTATCTTCCAAT+AGG 0.408356 1:-91996841 MsG0180005451.01.T01:CDS
CCGGTTGAGGTGGAGGTTCA+AGG 0.412100 1:-92001564 MsG0180005451.01.T01:CDS
TTTCTTCTAGTCTCTTCACT+TGG 0.412470 1:+91996549 None:intergenic
AAACATATATCTCAATTAGA+AGG 0.412778 1:-91995903 MsG0180005451.01.T01:CDS
GCCCGAATTTGCAAATTTCA+AGG 0.415467 1:+91998444 None:intergenic
GCATCAAATGGCATCAGTCC+TGG 0.418524 1:-91997502 MsG0180005451.01.T01:CDS
TGTGTTTCATTTCATTGTGC+TGG 0.418901 1:+91995964 None:intergenic
GCAGTCAGCGCAGCAAATTT+CGG 0.421568 1:+91994637 None:intergenic
CTGAAATTTGCAGAGGTTGA+GGG 0.425892 1:-91994889 MsG0180005451.01.T01:CDS
GAAAGATTACAGGAGCCTTC+AGG 0.428828 1:-91997295 MsG0180005451.01.T01:CDS
TGCAGAAATGGGGAAGATAA+TGG 0.433442 1:-91997841 MsG0180005451.01.T01:intron
TTACAGTTGCAACAATGAAA+TGG 0.436006 1:+91998646 None:intergenic
AGTTCTGTCTGAAGCTATAA+GGG 0.436569 1:+91997461 None:intergenic
ATGAATTGCGGAACCACAAC+AGG 0.437283 1:-91996211 MsG0180005451.01.T01:CDS
CCTTGAACCTCCACCTCAAC+CGG 0.440152 1:+92001564 None:intergenic
ATAAAACAGACTATGTAGTC+TGG 0.441515 1:-91994432 MsG0180005451.01.T01:three_prime_UTR
GTCAAATACAGGCTGGTCAA+TGG 0.441874 1:-91997380 MsG0180005451.01.T01:CDS
CAGTCCTGGGGTAGCTTCAT+GGG 0.444592 1:-91997488 MsG0180005451.01.T01:CDS
GTTGGTTTCCCAACATCATC+TGG 0.444751 1:+91998786 None:intergenic
TTGGCCTCAACTGTTCCTCT+TGG 0.447378 1:+91997430 None:intergenic
ACTATTATTGAAGTTCTGTT+GGG 0.447983 1:+91997075 None:intergenic
GACTACATGTGGCCCATATG+AGG 0.448512 1:+91994552 None:intergenic
TTGTAACCCCTGTATATGAT+TGG 0.451481 1:+91994781 None:intergenic
ATCGTCATTGGTCTCCATCA+AGG 0.466927 1:-91996498 MsG0180005451.01.T01:CDS
TTCTTCTAGTCTCTTCACTT+GGG 0.467384 1:+91996550 None:intergenic
GGAGAAAGAACTGAGAATAC+AGG 0.469997 1:-91996450 MsG0180005451.01.T01:CDS
GCTGTACGTAATCTCAAGAA+TGG 0.473934 1:-91994844 MsG0180005451.01.T01:CDS
AGAAGAAAAGATAGAGATGC+AGG 0.477881 1:-91996534 MsG0180005451.01.T01:CDS
TCTGAAATTTGCAGAGGTTG+AGG 0.478380 1:-91994890 MsG0180005451.01.T01:CDS
TGATCTACCGGTTGAGGTGG+AGG 0.479277 1:-92001571 MsG0180005451.01.T01:CDS
AGAAGCAGAATTAAATGCTA+TGG 0.479810 1:-91995865 MsG0180005451.01.T01:CDS
TCAAATACAGGCTGGTCAAT+GGG 0.480928 1:-91997379 MsG0180005451.01.T01:CDS
CATCAAATGGCATCAGTCCT+GGG 0.483449 1:-91997501 MsG0180005451.01.T01:CDS
ATCAAAATCAGAAATGCATA+AGG 0.483727 1:-91995760 MsG0180005451.01.T01:intron
GAATGAAGTGGCGGTCCTAA+AGG 0.486341 1:-91994974 MsG0180005451.01.T01:CDS
ACAAAGGCACAGGGATGAAA+AGG 0.486938 1:-91996024 MsG0180005451.01.T01:CDS
ATTCTCAATCAAAGCATCAT+AGG 0.487620 1:+91994474 None:intergenic
TGATGCATCGGATCTACTCT+TGG 0.487712 1:+91997519 None:intergenic
GTTACAAGCACTTCGGAAGC+AGG 0.487924 1:-91997197 MsG0180005451.01.T01:CDS
AGTTTAGGTGATTGGACAAA+CGG 0.490146 1:-91997340 MsG0180005451.01.T01:CDS
GTGAGATTGTTTCTCTGAAG+AGG 0.495168 1:-91997243 MsG0180005451.01.T01:CDS
GAGAAAACTGCTGTTCAAGA+TGG 0.500999 1:-91998753 MsG0180005451.01.T01:CDS
TCTTCAAAATCTGGCTACTT+GGG 0.505506 1:-91998529 MsG0180005451.01.T01:CDS
TAAATTTGAAGATGAACTCC+AGG 0.505676 1:-91996423 MsG0180005451.01.T01:CDS
AAGAGACAATGAGGCTGCTA+AGG 0.508811 1:-91995796 MsG0180005451.01.T01:CDS
AGCAGCCTCATTGTCTCTTG+AGG 0.509235 1:+91995800 None:intergenic
TTGAAGATGCACAAAGGCAC+AGG 0.510046 1:-91996034 MsG0180005451.01.T01:CDS
ATTGTGTCTCGTCTTTCTCA+GGG 0.510679 1:+91996346 None:intergenic
GCTGTGGAAATTTATAATGA+TGG 0.510768 1:-91997817 MsG0180005451.01.T01:CDS
CTTTGGTGCCAGATGATGTT+GGG 0.511310 1:-91998794 MsG0180005451.01.T01:CDS
ACACAGTTTGCAGAAAGAAC+AGG 0.512040 1:-91995946 MsG0180005451.01.T01:CDS
TACTCATGATCTACCGGTTG+AGG 0.518528 1:-92001577 None:intergenic
TTTCTTCCATAAGCCTGTTG+TGG 0.519288 1:+91996198 None:intergenic
AGATCAACATGAATTGAAAG+TGG 0.519867 1:-91996138 MsG0180005451.01.T01:CDS
AGTAGATCCGATGCATCAAA+TGG 0.520711 1:-91997514 MsG0180005451.01.T01:CDS
CCCGAATTTGCAAATTTCAA+GGG 0.521489 1:+91998445 None:intergenic
AGAAAGACAACAGCTTGTTA+TGG 0.526698 1:-91994866 MsG0180005451.01.T01:CDS
GGTACATTGTCAAGGTAACC+AGG 0.529091 1:-91994590 MsG0180005451.01.T01:three_prime_UTR
AAAGGAATTATTGAATGAAG+TGG 0.532662 1:-91994986 MsG0180005451.01.T01:CDS
AGAAATGCAATCAAGAGCTC+AGG 0.533105 1:-91996169 MsG0180005451.01.T01:CDS
AGTCTGATATTGATAATACT+AGG 0.533275 1:-91997018 MsG0180005451.01.T01:CDS
TAAATTTGGTTACACCGTCC+TGG 0.535213 1:+91994733 None:intergenic
AGAAAACTGCTGTTCAAGAT+GGG 0.543774 1:-91998752 MsG0180005451.01.T01:CDS
GATTGTTTCTCTGAAGAGGC+AGG 0.546222 1:-91997239 MsG0180005451.01.T01:CDS
GTTCAAGGTTGAAGACATAG+TGG 0.547322 1:-92001549 MsG0180005451.01.T01:CDS
GGCTCCTGTAATCTTTCTCT+CGG 0.547618 1:+91997301 None:intergenic
TTACAGGAGCCTTCAGGCAA+TGG 0.549125 1:-91997289 MsG0180005451.01.T01:CDS
GGAATGGATGCTGCAAGCAC+TGG 0.552828 1:-91995223 MsG0180005451.01.T01:CDS
CTCAAGAATAACAGAGGACG+AGG 0.553689 1:-91995834 MsG0180005451.01.T01:CDS
ACTGATGCCATTTGATGCAT+CGG 0.558366 1:+91997507 None:intergenic
ATGATGTTGTAGCCTCATAT+GGG 0.558962 1:-91994564 MsG0180005451.01.T01:three_prime_UTR
GTGGCATTGCCATTGCCTGA+AGG 0.565313 1:+91997280 None:intergenic
GTGCATAAGAGGTCAAATAC+AGG 0.566002 1:-91997391 MsG0180005451.01.T01:CDS
AATTTGCTGCGCTGACTGCA+CGG 0.575216 1:-91994633 MsG0180005451.01.T01:three_prime_UTR
TCATCCCATGAAGCTACCCC+AGG 0.575983 1:+91997484 None:intergenic
TAAGAATACTCATGATCTAC+CGG 0.576340 1:-92001583 None:intergenic
TATCTTATAGAATAGCAACT+TGG 0.578135 1:-91997542 MsG0180005451.01.T01:intron
TACCTTGACAATGTACCGTA+CGG 0.578896 1:+91994596 None:intergenic
TCATGATCTACCGGTTGAGG+TGG 0.578896 1:-92001574 MsG0180005451.01.T01:CDS
CATGTTACAAAATGAACACT+CGG 0.582030 1:-91996603 MsG0180005451.01.T01:CDS
TCTTTGGTGCCAGATGATGT+TGG 0.584848 1:-91998795 MsG0180005451.01.T01:CDS
TTGAAACACCAATTGAGCTA+TGG 0.589258 1:-91997790 MsG0180005451.01.T01:CDS
GGTAGATTACGCTCAGCTTG+AGG 0.591140 1:-92001504 MsG0180005451.01.T01:CDS
TATATCTCAATTAGAAGGAG+AGG 0.593443 1:-91995898 MsG0180005451.01.T01:CDS
ACAGGTAACTATTCAGAATG+TGG 0.594916 1:-91997977 MsG0180005451.01.T01:intron
CGCATCTGAGCAGCTTCAGG+AGG 0.596198 1:-91996315 MsG0180005451.01.T01:CDS
TTTCATACCAATCATATACA+GGG 0.598503 1:-91994788 MsG0180005451.01.T01:three_prime_UTR
GTCCGTACGGTACATTGTCA+AGG 0.604440 1:-91994598 MsG0180005451.01.T01:three_prime_UTR
GTAACTATTCAGAATGTGGA+AGG 0.605000 1:-91997973 MsG0180005451.01.T01:CDS
CTACCTTATTTGCAGAAATG+GGG 0.605496 1:-91997851 MsG0180005451.01.T01:intron
AAGTGGCGGTCCTAAAGGAA+AGG 0.605693 1:-91994969 MsG0180005451.01.T01:CDS
TCGAAGAAGCTGATGAATTG+CGG 0.607639 1:-91996223 MsG0180005451.01.T01:CDS
ATGTACGCATTTGCTAGTTG+AGG 0.609910 1:-92001525 MsG0180005451.01.T01:CDS
AGGCTACAACATCATACCCC+TGG 0.610084 1:+91994572 None:intergenic
TCTTCTTAAGAATGAAAATG+TGG 0.611817 1:-91996666 MsG0180005451.01.T01:CDS
ATCATATACAGGGGTTACAA+AGG 0.612348 1:-91994778 MsG0180005451.01.T01:three_prime_UTR
AGATTACGCTCAGCTTGAGG+TGG 0.615096 1:-92001501 MsG0180005451.01.T01:CDS
TCAATGGGTTCAGCATCAGA+TGG 0.615920 1:-91997364 MsG0180005451.01.T01:CDS
GATTAGTCTGAAATTTGCAG+AGG 0.617697 1:-91994896 MsG0180005451.01.T01:CDS
AAGACAAATCAACGGTCTCA+GGG 0.626387 1:-91997140 MsG0180005451.01.T01:CDS
TGGGGAAGATAATGGTGCTG+TGG 0.626676 1:-91997833 MsG0180005451.01.T01:CDS
ATAAGAGGTCAAATACAGGC+TGG 0.635907 1:-91997387 MsG0180005451.01.T01:CDS
AACTAGAGTTACAAGCACTT+CGG 0.636170 1:-91997204 MsG0180005451.01.T01:CDS
TTCAAGGTTGAAGACATAGT+GGG 0.637831 1:-92001548 MsG0180005451.01.T01:CDS
ACTGGTATTAGCAAGTCTGA+AGG 0.642094 1:-91995205 MsG0180005451.01.T01:CDS
GTACATTGTCAAGGTAACCA+GGG 0.643181 1:-91994589 MsG0180005451.01.T01:three_prime_UTR
TGAAGATGCACAAAGGCACA+GGG 0.646468 1:-91996033 MsG0180005451.01.T01:CDS
CAGTTTGCAGAAAGAACAGG+TGG 0.646980 1:-91995943 MsG0180005451.01.T01:CDS
TGATGCTGAACGCCTTACAA+AGG 0.649461 1:-91995004 MsG0180005451.01.T01:CDS
GTATTAGCAAGTCTGAAGGA+AGG 0.654276 1:-91995201 MsG0180005451.01.T01:intron
GGAATTATTGAATGAAGTGG+CGG 0.655168 1:-91994983 MsG0180005451.01.T01:CDS
CATGACCTCAAGAGACAATG+AGG 0.664511 1:-91995805 MsG0180005451.01.T01:CDS
ATCAAATGGCATCAGTCCTG+GGG 0.667145 1:-91997500 MsG0180005451.01.T01:CDS
TGGAAGGATATACTGCCGAA+AGG 0.668488 1:-91997957 MsG0180005451.01.T01:intron
CAGAACTCAATGCCACCAAG+AGG 0.670351 1:-91997445 MsG0180005451.01.T01:CDS
AAGAAGCTCAAGAATAACAG+AGG 0.670995 1:-91995840 MsG0180005451.01.T01:CDS
GCCACCAAGAGGAACAGTTG+AGG 0.674754 1:-91997434 MsG0180005451.01.T01:CDS
AAGATATCATGATTACTACC+AGG 0.676931 1:-91994751 MsG0180005451.01.T01:three_prime_UTR
TATCATGATTACTACCAGGA+CGG 0.682436 1:-91994747 MsG0180005451.01.T01:three_prime_UTR
TTCATACCAATCATATACAG+GGG 0.688200 1:-91994787 MsG0180005451.01.T01:three_prime_UTR
AAGAACTTGAAGATGCACAA+AGG 0.694127 1:-91996040 MsG0180005451.01.T01:CDS
TACATTGTCAAGGTAACCAG+GGG 0.703545 1:-91994588 MsG0180005451.01.T01:three_prime_UTR
AATTTATCAAGACAAATCAA+CGG 0.718250 1:-91997148 MsG0180005451.01.T01:CDS
GAATTGTTATAAGCAACGCG+AGG 0.726879 1:-91996729 MsG0180005451.01.T01:CDS
TGAGGTGGAGTTGAACACAC+CGG 0.738882 1:-92001486 MsG0180005451.01.T01:intron
GCTTATAAAAGAGCTCACAG+TGG 0.747992 1:-91996696 MsG0180005451.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTATATGAAATTAATTT+GGG + Chr1:91996724-91996743 None:intergenic 10.0%
!! ATCAACAAAATATATTATTA+TGG + Chr1:92000740-92000759 None:intergenic 10.0%
!! CATCAAATTAAAAATTTAAA+CGG + Chr1:91996302-91996321 None:intergenic 10.0%
!! TATATATATATATTTGAAGA+AGG + Chr1:91996545-91996564 None:intergenic 10.0%
!!! AAAGTTTAAATCTTTTTTTA+TGG - Chr1:91997435-91997454 MsG0180005451.01.T01:CDS 10.0%
!!! TACAATAACATTTTTTATTT+TGG - Chr1:92000477-92000496 MsG0180005451.01.T01:intron 10.0%
!! AAAACTTCTACTATAAATAT+AGG - Chr1:91995213-91995232 MsG0180005451.01.T01:CDS 15.0%
!! AATGTAAAATGATTTATGTT+TGG - Chr1:91997748-91997767 MsG0180005451.01.T01:intron 15.0%
!! AGCAAACTAATAAAAAAAAA+TGG + Chr1:91996587-91996606 None:intergenic 15.0%
!! GAAACTATATGAAATTAATT+TGG + Chr1:91996725-91996744 None:intergenic 15.0%
!! GGAAAAAAATAATCATAATA+GGG + Chr1:91995858-91995877 None:intergenic 15.0%
!! TTAATATCTGATAATAAGTA+TGG + Chr1:92000280-92000299 None:intergenic 15.0%
!!! AAACTAACTTTTATTATTCT+TGG - Chr1:92000956-92000975 MsG0180005451.01.T01:intron 15.0%
!!! GAATAATAAAAGTTAGTTTT+TGG + Chr1:92000955-92000974 None:intergenic 15.0%
!!! TCATACATTACTTTATTTTT+TGG - Chr1:91995712-91995731 MsG0180005451.01.T01:intron 15.0%
!!! TGATTTTGTAAAATTGATTA+TGG - Chr1:91997712-91997731 MsG0180005451.01.T01:intron 15.0%
!!! TTAATAGATTTTAACATGTT+TGG - Chr1:91996022-91996041 MsG0180005451.01.T01:CDS 15.0%
!!! TTTTTCATTATACAACAATT+AGG + Chr1:91997008-91997027 None:intergenic 15.0%
!! AAACATATATCTCAATTAGA+AGG - Chr1:92000097-92000116 MsG0180005451.01.T01:intron 20.0%
!! AAGTAATATAGTATGAATGT+AGG + Chr1:91995739-91995758 None:intergenic 20.0%
!! AAGTACAAAAGAAAAAACAA+TGG - Chr1:91999904-91999923 MsG0180005451.01.T01:intron 20.0%
!! AATTTATCAAGACAAATCAA+CGG - Chr1:91998852-91998871 MsG0180005451.01.T01:intron 20.0%
!! ACAAAAGAATAAGGAAATAT+TGG - Chr1:91999142-91999161 MsG0180005451.01.T01:intron 20.0%
!! AGTTTAACAGATTCAAAAAT+TGG + Chr1:91997292-91997311 None:intergenic 20.0%
!! GGGAAAAAAATAATCATAAT+AGG + Chr1:91995859-91995878 None:intergenic 20.0%
!! TGATATTGATCAAACTATTA+TGG + Chr1:91996277-91996296 None:intergenic 20.0%
!! TTCAGCTAGATTAATAAATA+TGG + Chr1:91996849-91996868 None:intergenic 20.0%
!!! AAATCAATTTTAAGTAACAC+AGG + Chr1:91997698-91997717 None:intergenic 20.0%
!!! AAGCTATGATTTGTAATTTT+TGG - Chr1:91996092-91996111 MsG0180005451.01.T01:CDS 20.0%
!!! ATCAGATTTAGGTTAAATAA+AGG + Chr1:91995800-91995819 None:intergenic 20.0%
!!! ATTGTTTTGTACTTAAAAGA+AGG - Chr1:91997399-91997418 MsG0180005451.01.T01:CDS 20.0%
!!! TAGAAGTTTTGCTTAAAATT+TGG + Chr1:91995203-91995222 None:intergenic 20.0%
!!! TGATTTTTGTAACATGAAAA+GGG - Chr1:92000756-92000775 MsG0180005451.01.T01:intron 20.0%
!!! TGGCTTTATTATTTAACAAA+AGG + Chr1:91996512-91996531 None:intergenic 20.0%
!!! TGTTTTATTCACTTTGATTT+TGG - Chr1:91995615-91995634 MsG0180005451.01.T01:intron 20.0%
!!! TTGATTTTTGTAACATGAAA+AGG - Chr1:92000755-92000774 MsG0180005451.01.T01:intron 20.0%
!!! TTTTTTTATGGATTCTTGTA+GGG - Chr1:91997447-91997466 MsG0180005451.01.T01:CDS 20.0%
! AAAGGAATTATTGAATGAAG+TGG - Chr1:92001014-92001033 MsG0180005451.01.T01:intron 25.0%
! AATGCTAGAACAAAAGAATA+AGG - Chr1:91999133-91999152 MsG0180005451.01.T01:intron 25.0%
! AATTCTCAATTTCACTATTC+TGG + Chr1:91999256-91999275 None:intergenic 25.0%
! ACACTATCAAATCTGAAAAT+GGG - Chr1:91996976-91996995 MsG0180005451.01.T01:CDS 25.0%
! ACTATTATTGAAGTTCTGTT+GGG + Chr1:91998928-91998947 None:intergenic 25.0%
! AGTAATAACCTTAGAATCTA+AGG - Chr1:92000414-92000433 MsG0180005451.01.T01:intron 25.0%
! AGTTAGTACTCACAATAAAA+AGG - Chr1:92000380-92000399 MsG0180005451.01.T01:intron 25.0%
! ATCAAAATCAGAAATGCATA+AGG - Chr1:92000240-92000259 MsG0180005451.01.T01:intron 25.0%
! ATGAAAAAAACATGTTTCCT+AGG - Chr1:91997020-91997039 MsG0180005451.01.T01:CDS 25.0%
! ATTGAGTTAATGTTGTCATA+TGG - Chr1:91995760-91995779 MsG0180005451.01.T01:intron 25.0%
! CAAAGGAAAAATTATTGCAA+TGG + Chr1:91998101-91998120 None:intergenic 25.0%
! CATCCATATAACAAAACATT+TGG - Chr1:92000890-92000909 MsG0180005451.01.T01:intron 25.0%
! CATTCAATAATTCCTTTGTA+AGG + Chr1:92001011-92001030 None:intergenic 25.0%
! GATAAAAATTTGACTACATG+TGG + Chr1:92001462-92001481 None:intergenic 25.0%
! GTTTATGAAAAAGAAATGAG+TGG - Chr1:91999035-91999054 MsG0180005451.01.T01:intron 25.0%
! TAAAAGAAGGATATGTTGAT+TGG - Chr1:91997412-91997431 MsG0180005451.01.T01:CDS 25.0%
! TACACTATCAAATCTGAAAA+TGG - Chr1:91996975-91996994 MsG0180005451.01.T01:CDS 25.0%
! TACTATTATTGAAGTTCTGT+TGG + Chr1:91998929-91998948 None:intergenic 25.0%
! TATCTTATAGAATAGCAACT+TGG - Chr1:91998458-91998477 MsG0180005451.01.T01:CDS 25.0%
! TCAAATGAATAAATCCAAAC+AGG + Chr1:91998315-91998334 None:intergenic 25.0%
! TCTTAAAATAGTCTGATACA+AGG + Chr1:91995239-91995258 None:intergenic 25.0%
! TCTTCTTAAGAATGAAAATG+TGG - Chr1:91999334-91999353 MsG0180005451.01.T01:intron 25.0%
! TGAAAATCAAGTTAAGTCTT+TGG - Chr1:91999529-91999548 MsG0180005451.01.T01:intron 25.0%
! TGTGAATGTAAATCAGATTT+AGG + Chr1:91995811-91995830 None:intergenic 25.0%
! TGTGGTGATAATATATAACA+AGG - Chr1:92000606-92000625 MsG0180005451.01.T01:intron 25.0%
! TTAATGTTGTCATATGGTAA+TGG - Chr1:91995766-91995785 MsG0180005451.01.T01:CDS 25.0%
! TTACATTTACATATCTCAAG+AGG + Chr1:91995908-91995927 None:intergenic 25.0%
! TTACTCATCATATAGTGAAA+CGG - Chr1:91995471-91995490 MsG0180005451.01.T01:intron 25.0%
! TTGCGTAAGAAAATGAATTA+TGG + Chr1:91996120-91996139 None:intergenic 25.0%
! TTTCATACCAATCATATACA+GGG - Chr1:92001212-92001231 MsG0180005451.01.T01:intron 25.0%
!! AAAAATGTTAGTTGATGTAC+AGG + Chr1:92001330-92001349 None:intergenic 25.0%
!! AAATTAATTTGGGACAAAGT+CGG + Chr1:91996714-91996733 None:intergenic 25.0%
!! AATTTTATCTCCTTCAAAAG+TGG - Chr1:91997856-91997875 MsG0180005451.01.T01:intron 25.0%
!! ACACAGAATTAAATGTTTTG+CGG - Chr1:91999216-91999235 MsG0180005451.01.T01:intron 25.0%
!! AGTCTGATATTGATAATACT+AGG - Chr1:91998982-91999001 MsG0180005451.01.T01:intron 25.0%
!! TATCATCTGTTTGACATTTT+TGG - Chr1:92001478-92001497 MsG0180005451.01.T01:intron 25.0%
!! TTGAATCTGTTAAACTTGTT+AGG - Chr1:91997296-91997315 MsG0180005451.01.T01:CDS 25.0%
!!! AACATAGAATCCATTTTTCT+TGG - Chr1:91996421-91996440 MsG0180005451.01.T01:CDS 25.0%
!!! AATCTCACTTTTGAGATTTT+CGG + Chr1:91998745-91998764 None:intergenic 25.0%
!!! AATCTTTTGAGATTTCCTAT+TGG + Chr1:91999177-91999196 None:intergenic 25.0%
!!! AATGCATTCTTTTTCATCTT+TGG + Chr1:91997178-91997197 None:intergenic 25.0%
!!! ACTATTTTAAGAGAGATAGA+GGG - Chr1:91995247-91995266 MsG0180005451.01.T01:intron 25.0%
!!! CAAAAAGTACTGGTTAAATT+TGG + Chr1:92001284-92001303 None:intergenic 25.0%
!!! CAAATGTTTTGTTATATGGA+TGG + Chr1:92000892-92000911 None:intergenic 25.0%
!!! CTTTTTTTATGGATTCTTGT+AGG - Chr1:91997446-91997465 MsG0180005451.01.T01:CDS 25.0%
!!! GAAAAGTGTACATATCATTT+TGG + Chr1:92000450-92000469 None:intergenic 25.0%
!!! TGAATCTGTTAAACTTGTTA+GGG - Chr1:91997297-91997316 MsG0180005451.01.T01:CDS 25.0%
!!! TTACTTTCTACTTTTTAGCA+TGG + Chr1:91996447-91996466 None:intergenic 25.0%
AAATTCAACTGTAATGAGTG+AGG - Chr1:92000578-92000597 MsG0180005451.01.T01:intron 30.0%
AAGAAAGTAAGAGAGATAGA+GGG + Chr1:91997601-91997620 None:intergenic 30.0%
AAGATATCATGATTACTACC+AGG - Chr1:92001249-92001268 MsG0180005451.01.T01:intron 30.0%
AATTCAACTGTAATGAGTGA+GGG - Chr1:92000579-92000598 MsG0180005451.01.T01:intron 30.0%
AGAAGCAGAATTAAATGCTA+TGG - Chr1:92000135-92000154 MsG0180005451.01.T01:intron 30.0%
AGATCAACATGAATTGAAAG+TGG - Chr1:91999862-91999881 MsG0180005451.01.T01:intron 30.0%
AGATTAGGAGATGAATAATG+TGG + Chr1:91997660-91997679 None:intergenic 30.0%
ATAAAACAGACTATGTAGTC+TGG - Chr1:92001568-92001587 MsG0180005451.01.T01:CDS 30.0%
ATACACTAAGAATCAGTGTT+TGG - Chr1:91997887-91997906 MsG0180005451.01.T01:intron 30.0%
ATCAATAACAACTTGATGTG+TGG + Chr1:91995661-91995680 None:intergenic 30.0%
ATGTTGTTGTGGTATTTATG+AGG + Chr1:91996406-91996425 None:intergenic 30.0%
ATTTACATATCTCAAGAGGA+TGG + Chr1:91995904-91995923 None:intergenic 30.0%
CAATTCTTATGTGAGAAGTT+AGG + Chr1:91997998-91998017 None:intergenic 30.0%
CACTATCAAATCTGAAAATG+GGG - Chr1:91996977-91996996 MsG0180005451.01.T01:CDS 30.0%
CATGTTACAAAATGAACACT+CGG - Chr1:91999397-91999416 MsG0180005451.01.T01:intron 30.0%
CTAAACAGAAACTTCTAACA+AGG - Chr1:91998377-91998396 MsG0180005451.01.T01:intron 30.0%
CTTAAGTAGTGCTAAAGATT+AGG + Chr1:91997675-91997694 None:intergenic 30.0%
GATCAAAGCTGTATTCAAAT+TGG - Chr1:91996901-91996920 MsG0180005451.01.T01:CDS 30.0%
GATGAAAAAGAATGCATTGA+TGG - Chr1:91997180-91997199 MsG0180005451.01.T01:CDS 30.0%
GATTAGGAGATGAATAATGT+GGG + Chr1:91997659-91997678 None:intergenic 30.0%
GCAATGGTTAAATTAACTGT+AGG + Chr1:91998085-91998104 None:intergenic 30.0%
GCTGTGGAAATTTATAATGA+TGG - Chr1:91998183-91998202 MsG0180005451.01.T01:intron 30.0%
GTAATGTATGAATGTTGTTG+AGG + Chr1:91995703-91995722 None:intergenic 30.0%
GTGTAAATTTCAAACATCCT+AGG + Chr1:91997040-91997059 None:intergenic 30.0%
GTTAAATTAACTGTAGGTTG+TGG + Chr1:91998079-91998098 None:intergenic 30.0%
GTTACAATCTTGATGAAGTA+AGG - Chr1:91998247-91998266 MsG0180005451.01.T01:intron 30.0%
GTTTCATACCAATCATATAC+AGG - Chr1:92001211-92001230 MsG0180005451.01.T01:intron 30.0%
TAAATTTGAAGATGAACTCC+AGG - Chr1:91999577-91999596 MsG0180005451.01.T01:intron 30.0%
TATATCTCAATTAGAAGGAG+AGG - Chr1:92000102-92000121 MsG0180005451.01.T01:intron 30.0%
TATTGGATCTATCTTCCAAT+AGG - Chr1:91999159-91999178 MsG0180005451.01.T01:intron 30.0%
TATTTATGAGGTTAGGGAAT+TGG + Chr1:91996394-91996413 None:intergenic 30.0%
TCTCAATCAACCAAGAAATA+AGG - Chr1:91996625-91996644 MsG0180005451.01.T01:CDS 30.0%
TGAAATAAATGCAACATGAC+TGG + Chr1:91996485-91996504 None:intergenic 30.0%
TGATGCTTTGATTGAGAATT+TGG - Chr1:92001530-92001549 MsG0180005451.01.T01:CDS 30.0%
TTACAGTTGCAACAATGAAA+TGG + Chr1:91997357-91997376 None:intergenic 30.0%
TTCATACCAATCATATACAG+GGG - Chr1:92001213-92001232 MsG0180005451.01.T01:intron 30.0%
TTGTGGTATTTATGAGGTTA+GGG + Chr1:91996400-91996419 None:intergenic 30.0%
TTGTTATATGGATGGTAAGA+GGG + Chr1:92000884-92000903 None:intergenic 30.0%
TTTGTAACATGAAAAGGGAA+TGG - Chr1:92000761-92000780 MsG0180005451.01.T01:intron 30.0%
! AAATGGATTCTATGTTGTTG+TGG + Chr1:91996417-91996436 None:intergenic 30.0%
! AATTATGATCCCTCTAAAAG+TGG + Chr1:91995988-91996007 None:intergenic 30.0%
! ACATCAAGTTGTTATTGATG+TGG - Chr1:91995662-91995681 MsG0180005451.01.T01:intron 30.0%
! AGATGAATTTTCATCGTCAT+TGG - Chr1:91999490-91999509 MsG0180005451.01.T01:intron 30.0%
! AGTTGATGTACAGGATAAAT+AGG + Chr1:92001321-92001340 None:intergenic 30.0%
! ATTCTCAATCAAAGCATCAT+AGG + Chr1:92001529-92001548 None:intergenic 30.0%
! CTCAAATTCTGAACTTCTTT+TGG - Chr1:91999091-91999110 MsG0180005451.01.T01:intron 30.0%
! GGAGATAAAATTGATTCTAG+AGG + Chr1:91997848-91997867 None:intergenic 30.0%
! TATTGATGTGGTTTTCTCAT+TGG - Chr1:91995674-91995693 MsG0180005451.01.T01:intron 30.0%
! TCATCAATGATTTGAAGTCA+AGG - Chr1:91994981-91995000 MsG0180005451.01.T01:CDS 30.0%
! TCTACCTTATTTGCAGAAAT+GGG - Chr1:91998148-91998167 MsG0180005451.01.T01:intron 30.0%
! TTTGTTATATGGATGGTAAG+AGG + Chr1:92000885-92000904 None:intergenic 30.0%
!! ATGTTTGTTTCCACTTTTAG+AGG - Chr1:91995975-91995994 MsG0180005451.01.T01:CDS 30.0%
!! CTATTTTAAGAGAGATAGAG+GGG - Chr1:91995248-91995267 MsG0180005451.01.T01:intron 30.0%
!! GACTATTTTAAGAGAGATAG+AGG - Chr1:91995246-91995265 MsG0180005451.01.T01:intron 30.0%
!! GCACCAAATGTTTTGTTATA+TGG + Chr1:92000896-92000915 None:intergenic 30.0%
!! GTATGAATCTGCTTTTGATT+AGG - Chr1:91997150-91997169 MsG0180005451.01.T01:CDS 30.0%
!! TGTTTGTTTCCACTTTTAGA+GGG - Chr1:91995976-91995995 MsG0180005451.01.T01:CDS 30.0%
!!! GCTGTTGTTTTTTCTACTTT+TGG - Chr1:91995578-91995597 MsG0180005451.01.T01:intron 30.0%
!!! GTAGAGTTTTTAGTGCATTT+AGG + Chr1:91998133-91998152 None:intergenic 30.0%
!!! TTGATTTTCAAGTTCCTTGA+TGG + Chr1:91999519-91999538 None:intergenic 30.0%
!!! TTTTTTCATTTTGCATAGCC+TGG + Chr1:91999598-91999617 None:intergenic 30.0%
AAAAAACTGAGCAGGAAGAA+CGG - Chr1:91999612-91999631 MsG0180005451.01.T01:intron 35.0%
AAAGGAAAGGAACACGAATA+TGG - Chr1:92001044-92001063 MsG0180005451.01.T01:intron 35.0%
AACTAGAGTTACAAGCACTT+CGG - Chr1:91998796-91998815 MsG0180005451.01.T01:CDS 35.0%
AAGAACTTGAAGATGCACAA+AGG - Chr1:91999960-91999979 MsG0180005451.01.T01:intron 35.0%
AAGAAGCTCAAGAATAACAG+AGG - Chr1:92000160-92000179 MsG0180005451.01.T01:intron 35.0%
AAGAATCAGTGTTTGGACAT+TGG - Chr1:91997894-91997913 MsG0180005451.01.T01:intron 35.0%
AATCCTAATAGTGTTTCCCA+AGG + Chr1:91995367-91995386 None:intergenic 35.0%
AATGCATAAGGTAATTGCTC+AGG - Chr1:92000252-92000271 MsG0180005451.01.T01:intron 35.0%
AATTCTATTAAGCGCCTGTT+TGG - Chr1:91998298-91998317 MsG0180005451.01.T01:intron 35.0%
ACAGGTAACTATTCAGAATG+TGG - Chr1:91998023-91998042 MsG0180005451.01.T01:intron 35.0%
ACTGAACTCCTTAGATTCTA+AGG + Chr1:92000425-92000444 None:intergenic 35.0%
ACTTATTGACGTCGCATATT+AGG - Chr1:92000306-92000325 MsG0180005451.01.T01:intron 35.0%
AGAAAACTGCTGTTCAAGAT+GGG - Chr1:91997248-91997267 MsG0180005451.01.T01:CDS 35.0%
AGAAAGGCAACAACAAATCT+AGG - Chr1:91995286-91995305 MsG0180005451.01.T01:intron 35.0%
AGAAGAAAAGATAGAGATGC+AGG - Chr1:91999466-91999485 MsG0180005451.01.T01:intron 35.0%
AGAATGTATAGCACAACTTG+CGG - Chr1:91994608-91994627 MsG0180005451.01.T01:three_prime_UTR 35.0%
AGGGTTCATGATTGTGTTAA+AGG + Chr1:92000865-92000884 None:intergenic 35.0%
AGGTAGAAAAAGAAAGCAGT+CGG - Chr1:91998823-91998842 MsG0180005451.01.T01:CDS 35.0%
AGTTTAGGTGATTGGACAAA+CGG - Chr1:91998660-91998679 MsG0180005451.01.T01:CDS 35.0%
ATAACACAAATACGACGTTG+TGG + Chr1:92000918-92000937 None:intergenic 35.0%
ATCATATACAGGGGTTACAA+AGG - Chr1:92001222-92001241 MsG0180005451.01.T01:intron 35.0%
ATGATGTTGTAGCCTCATAT+GGG - Chr1:92001436-92001455 MsG0180005451.01.T01:intron 35.0%
ATTGGAATTTCAAGCAACTC+AGG - Chr1:91996919-91996938 MsG0180005451.01.T01:CDS 35.0%
CAAGAAAGTAAGAGAGATAG+AGG + Chr1:91997602-91997621 None:intergenic 35.0%
CACAAAATCAAGTGCATAAG+AGG - Chr1:91998598-91998617 MsG0180005451.01.T01:intron 35.0%
CACATAAGAATTGTCGAAAC+AGG - Chr1:91998005-91998024 MsG0180005451.01.T01:intron 35.0%
CATTCACACATTCCTTTGTT+AGG - Chr1:91995823-91995842 MsG0180005451.01.T01:CDS 35.0%
CATTTAGGAGAGAAAGTCAA+AGG + Chr1:91998118-91998137 None:intergenic 35.0%
CCCGAATTTGCAAATTTCAA+GGG + Chr1:91997558-91997577 None:intergenic 35.0%
CCCTTGAAATTTGCAAATTC+GGG - Chr1:91997555-91997574 MsG0180005451.01.T01:intron 35.0%
CTGAAAACATGTTCAAGTCA+TGG - Chr1:91996864-91996883 MsG0180005451.01.T01:CDS 35.0%
CTTGTTAGGGATTCAAAATC+AGG - Chr1:91997310-91997329 MsG0180005451.01.T01:CDS 35.0%
GAAAGGCAACAACAAATCTA+GGG - Chr1:91995287-91995306 MsG0180005451.01.T01:intron 35.0%
GAGTAACGTTACAAAAGAGA+TGG + Chr1:91995457-91995476 None:intergenic 35.0%
GATTGTGTTAAAGGGAACAA+GGG + Chr1:92000856-92000875 None:intergenic 35.0%
GCAAAATGAAAAAACTGAGC+AGG - Chr1:91999604-91999623 MsG0180005451.01.T01:intron 35.0%
GCCCTTGAAATTTGCAAATT+CGG - Chr1:91997554-91997573 MsG0180005451.01.T01:intron 35.0%
GCTTCAGTTAGATGCAATAA+AGG - Chr1:91999004-91999023 MsG0180005451.01.T01:intron 35.0%
GGAAACAAACATACACTACT+TGG + Chr1:91995967-91995986 None:intergenic 35.0%
GGAAACTGAACTGAAAGAAA+TGG - Chr1:92001065-92001084 MsG0180005451.01.T01:intron 35.0%
GGAATTATTGAATGAAGTGG+CGG - Chr1:92001017-92001036 MsG0180005451.01.T01:intron 35.0%
GGGTTCATGATTGTGTTAAA+GGG + Chr1:92000864-92000883 None:intergenic 35.0%
GTAACTATTCAGAATGTGGA+AGG - Chr1:91998027-91998046 MsG0180005451.01.T01:intron 35.0%
GTTGTGGTATTTATGAGGTT+AGG + Chr1:91996401-91996420 None:intergenic 35.0%
TATCATGATTACTACCAGGA+CGG - Chr1:92001253-92001272 MsG0180005451.01.T01:intron 35.0%
TATGATGTTGTAGCCTCATA+TGG - Chr1:92001435-92001454 MsG0180005451.01.T01:intron 35.0%
TATTCGTGTTCCTTTCCTTT+AGG + Chr1:92001044-92001063 None:intergenic 35.0%
TCATCATATAGTGAAACGGA+GGG - Chr1:91995475-91995494 MsG0180005451.01.T01:intron 35.0%
TCTTCAAAATCTGGCTACTT+GGG - Chr1:91997471-91997490 MsG0180005451.01.T01:CDS 35.0%
TGATTGTGTTAAAGGGAACA+AGG + Chr1:92000857-92000876 None:intergenic 35.0%
TGTGTTTCATTTCATTGTGC+TGG + Chr1:92000039-92000058 None:intergenic 35.0%
TTCAAGGTTGAAGACATAGT+GGG - Chr1:91994452-91994471 MsG0180005451.01.T01:three_prime_UTR 35.0%
TTCTTCAAAATCTGGCTACT+TGG - Chr1:91997470-91997489 MsG0180005451.01.T01:CDS 35.0%
TTCTTCTAGTCTCTTCACTT+GGG + Chr1:91999453-91999472 None:intergenic 35.0%
TTGAAACACCAATTGAGCTA+TGG - Chr1:91998210-91998229 MsG0180005451.01.T01:intron 35.0%
TTGAAGAAGGTTCTCAAGTT+TGG + Chr1:91996532-91996551 None:intergenic 35.0%
TTGTAACCCCTGTATATGAT+TGG + Chr1:92001222-92001241 None:intergenic 35.0%
TTGTAGGGTTCTTCAAAATC+TGG - Chr1:91997462-91997481 MsG0180005451.01.T01:CDS 35.0%
TTGTGTAGAGTTTGTCTCTT+TGG - Chr1:91995311-91995330 MsG0180005451.01.T01:intron 35.0%
TTTAGCATGGCCAAGAAAAA+TGG + Chr1:91996434-91996453 None:intergenic 35.0%
TTTCTTCTAGTCTCTTCACT+TGG + Chr1:91999454-91999473 None:intergenic 35.0%
TTTGTTCTAGCATTGCTTCA+AGG + Chr1:91999127-91999146 None:intergenic 35.0%
! AAGTCACACTCCTTATTTCT+TGG + Chr1:91996638-91996657 None:intergenic 35.0%
! AGTTCTGTCTGAAGCTATAA+GGG + Chr1:91998542-91998561 None:intergenic 35.0%
! ATCAGACTTCAAGCTTTTAG+AGG + Chr1:91998970-91998989 None:intergenic 35.0%
! ATTACTCTAAAAGAAGGCCA+AGG - Chr1:91994632-91994651 MsG0180005451.01.T01:three_prime_UTR 35.0%
! CACTTGATTTTGTGTTGCAT+TGG + Chr1:91998592-91998611 None:intergenic 35.0%
! CTAACTACACTAGGAGTTTT+AGG + Chr1:91994738-91994757 None:intergenic 35.0%
! CTACCTTATTTGCAGAAATG+GGG - Chr1:91998149-91998168 MsG0180005451.01.T01:intron 35.0%
! CTCTACCTTATTTGCAGAAA+TGG - Chr1:91998147-91998166 MsG0180005451.01.T01:intron 35.0%
! GAATGCATTGATGGTATCTT+TGG - Chr1:91997189-91997208 MsG0180005451.01.T01:CDS 35.0%
! GGTTAATGAGTTGAAGAAAG+CGG + Chr1:91996689-91996708 None:intergenic 35.0%
! TCAAGATGGGACTTGTTTAT+GGG - Chr1:91997261-91997280 MsG0180005451.01.T01:CDS 35.0%
! TCAATGATTTGAAGTCAAGG+TGG - Chr1:91994984-91995003 MsG0180005451.01.T01:CDS 35.0%
! TTACTCTAAAAGAAGGCCAA+GGG - Chr1:91994633-91994652 MsG0180005451.01.T01:three_prime_UTR 35.0%
! TTCAAGATGGGACTTGTTTA+TGG - Chr1:91997260-91997279 MsG0180005451.01.T01:CDS 35.0%
! TTTTCCGAGAGAAAGATTAC+AGG - Chr1:91998695-91998714 MsG0180005451.01.T01:CDS 35.0%
!! AAATGGATGTGTTGACTATG+TGG + Chr1:91995932-91995951 None:intergenic 35.0%
!! AACAGTTTTGTAGTGAGTGA+GGG - Chr1:92000519-92000538 MsG0180005451.01.T01:intron 35.0%
!! AAGAATTTGTTGACCCAGTT+CGG + Chr1:91995533-91995552 None:intergenic 35.0%
!! AGAAAGACAACAGCTTGTTA+TGG - Chr1:92001134-92001153 MsG0180005451.01.T01:intron 35.0%
!! ATGTGAAGTTCCACTTTTGA+AGG + Chr1:91997869-91997888 None:intergenic 35.0%
!! GATTAGTCTGAAATTTGCAG+AGG - Chr1:92001104-92001123 MsG0180005451.01.T01:intron 35.0%
!! GTTTTCTCTAGTTTCACTGT+TGG + Chr1:91997235-91997254 None:intergenic 35.0%
!! TCTCTTTGGAACAAACACTA+GGG - Chr1:91995325-91995344 MsG0180005451.01.T01:intron 35.0%
!!! TATGTGTGAGTTTTGTTCTG+CGG + Chr1:91996244-91996263 None:intergenic 35.0%
AAAAACTGAGCAGGAAGAAC+GGG - Chr1:91999613-91999632 MsG0180005451.01.T01:intron 40.0%
AAGACAAATCAACGGTCTCA+GGG - Chr1:91998860-91998879 MsG0180005451.01.T01:intron 40.0%
AAGGAGATCTTCAAAGAAGC+GGG - Chr1:91994667-91994686 MsG0180005451.01.T01:three_prime_UTR 40.0%
AAGGGCAGAGAAACAGTAAT+TGG + Chr1:91997540-91997559 None:intergenic 40.0%
AATCAGTGTTTGGACATTGG+TGG - Chr1:91997897-91997916 MsG0180005451.01.T01:intron 40.0%
AATCTTGATCCAACAAGAGG+TGG + Chr1:91995881-91995900 None:intergenic 40.0%
ACACAGTTTGCAGAAAGAAC+AGG - Chr1:92000054-92000073 MsG0180005451.01.T01:intron 40.0%
ACTATTAGGATTGAGTCCCT+TGG - Chr1:91995375-91995394 MsG0180005451.01.T01:intron 40.0%
ACTGGTATTAGCAAGTCTGA+AGG - Chr1:92000795-92000814 MsG0180005451.01.T01:intron 40.0%
AGAAATGCAATCAAGAGCTC+AGG - Chr1:91999831-91999850 MsG0180005451.01.T01:intron 40.0%
AGTAGATCCGATGCATCAAA+TGG - Chr1:91998486-91998505 MsG0180005451.01.T01:CDS 40.0%
ATAAGAGGTCAAATACAGGC+TGG - Chr1:91998613-91998632 MsG0180005451.01.T01:intron 40.0%
ATCAGTGTTTGGACATTGGT+GGG - Chr1:91997898-91997917 MsG0180005451.01.T01:intron 40.0%
ATCTTGATCCAACAAGAGGT+GGG + Chr1:91995880-91995899 None:intergenic 40.0%
ATTGTGTCTCGTCTTTCTCA+GGG + Chr1:91999657-91999676 None:intergenic 40.0%
CAAGGAGATCTTCAAAGAAG+CGG - Chr1:91994666-91994685 MsG0180005451.01.T01:three_prime_UTR 40.0%
CAGATGGAAGTTTAGGTGAT+TGG - Chr1:91998652-91998671 MsG0180005451.01.T01:CDS 40.0%
CCTAAAATTCCTAGCGTAGT+TGG - Chr1:91994832-91994851 MsG0180005451.01.T01:CDS 40.0%
CTCATCATATAGTGAAACGG+AGG - Chr1:91995474-91995493 MsG0180005451.01.T01:intron 40.0%
CTCCATAGTCATACCATTAC+CGG + Chr1:91994536-91994555 None:intergenic 40.0%
CTGAAATTTGCAGAGGTTGA+GGG - Chr1:92001111-92001130 MsG0180005451.01.T01:intron 40.0%
CTTCCCCATTTCTGCAAATA+AGG + Chr1:91998155-91998174 None:intergenic 40.0%
CTTGGATCGCATATCTCAAA+TGG + Chr1:91995949-91995968 None:intergenic 40.0%
GAACAAACACTAGGGTTTGA+GGG - Chr1:91995333-91995352 MsG0180005451.01.T01:intron 40.0%
GAAGAACTAGAACTCTTTGC+AGG - Chr1:92001182-92001201 MsG0180005451.01.T01:intron 40.0%
GAATGTATAGCACAACTTGC+GGG - Chr1:91994609-91994628 MsG0180005451.01.T01:three_prime_UTR 40.0%
GAATTGTTATAAGCAACGCG+AGG - Chr1:91999271-91999290 MsG0180005451.01.T01:intron 40.0%
GAGAAAACTGCTGTTCAAGA+TGG - Chr1:91997247-91997266 MsG0180005451.01.T01:CDS 40.0%
GAGCAAGGGATTTCTTCATA+AGG - Chr1:91994581-91994600 MsG0180005451.01.T01:three_prime_UTR 40.0%
GCCCGAATTTGCAAATTTCA+AGG + Chr1:91997559-91997578 None:intergenic 40.0%
GCTGAAACAAGGGTTTAGAA+AGG - Chr1:91995270-91995289 MsG0180005451.01.T01:intron 40.0%
GCTGTACGTAATCTCAAGAA+TGG - Chr1:92001156-92001175 MsG0180005451.01.T01:intron 40.0%
GCTTATAAAAGAGCTCACAG+TGG - Chr1:91999304-91999323 MsG0180005451.01.T01:intron 40.0%
GGAGAAAGAACTGAGAATAC+AGG - Chr1:91999550-91999569 MsG0180005451.01.T01:intron 40.0%
GGGAAACATTGACCTAACAA+AGG + Chr1:91995838-91995857 None:intergenic 40.0%
GGGTTAACGTTAGAATCTCA+TGG - Chr1:92000539-92000558 MsG0180005451.01.T01:intron 40.0%
GGTAGAAAAAGAAAGCAGTC+GGG - Chr1:91998824-91998843 MsG0180005451.01.T01:CDS 40.0%
GTAATGAGTGAGGGTTAATG+TGG - Chr1:92000588-92000607 MsG0180005451.01.T01:intron 40.0%
GTACATTGTCAAGGTAACCA+GGG - Chr1:92001411-92001430 MsG0180005451.01.T01:intron 40.0%
GTAGAAAAAGAAAGCAGTCG+GGG - Chr1:91998825-91998844 MsG0180005451.01.T01:CDS 40.0%
GTATTAGCAAGTCTGAAGGA+AGG - Chr1:92000799-92000818 MsG0180005451.01.T01:intron 40.0%
GTGCATAAGAGGTCAAATAC+AGG - Chr1:91998609-91998628 MsG0180005451.01.T01:intron 40.0%
GTTCAAGGTTGAAGACATAG+TGG - Chr1:91994451-91994470 MsG0180005451.01.T01:three_prime_UTR 40.0%
TAAATTTGGTTACACCGTCC+TGG + Chr1:92001270-92001289 None:intergenic 40.0%
TACATTGTCAAGGTAACCAG+GGG - Chr1:92001412-92001431 MsG0180005451.01.T01:intron 40.0%
TACCTTGACAATGTACCGTA+CGG + Chr1:92001407-92001426 None:intergenic 40.0%
TATTGTGTCTCGTCTTTCTC+AGG + Chr1:91999658-91999677 None:intergenic 40.0%
TCACCATGACATCTTCAACA+CGG + Chr1:91994700-91994719 None:intergenic 40.0%
TCACCTTGGGAAACACTATT+AGG - Chr1:91995361-91995380 MsG0180005451.01.T01:intron 40.0%
TCAGCATCACTGTCAGAATT+AGG + Chr1:92000985-92001004 None:intergenic 40.0%
TCAGCATCAGATGGAAGTTT+AGG - Chr1:91998645-91998664 MsG0180005451.01.T01:intron 40.0%
TCGAAGAAGCTGATGAATTG+CGG - Chr1:91999777-91999796 MsG0180005451.01.T01:intron 40.0%
TGAGCTCTTGATTGCATTTC+TGG + Chr1:91999832-91999851 None:intergenic 40.0%
TGCAGAAATGGGGAAGATAA+TGG - Chr1:91998159-91998178 MsG0180005451.01.T01:intron 40.0%
TGGAATCTTGATCCAACAAG+AGG + Chr1:91995884-91995903 None:intergenic 40.0%
TGTAAACTTGTGGAGCTACT+TGG - Chr1:91994910-91994929 MsG0180005451.01.T01:CDS 40.0%
TGTGGTTCATCTTCACCTTT+CGG + Chr1:91998061-91998080 None:intergenic 40.0%
TTATGAGGTTAGGGAATTGG+TGG + Chr1:91996391-91996410 None:intergenic 40.0%
TTTCTTCCATAAGCCTGTTG+TGG + Chr1:91999805-91999824 None:intergenic 40.0%
! ACTGATGCCATTTGATGCAT+CGG + Chr1:91998496-91998515 None:intergenic 40.0%
! AGCAGAAGTGCAAAAAGTAC+TGG + Chr1:92001294-92001313 None:intergenic 40.0%
! ATGTACGCATTTGCTAGTTG+AGG - Chr1:91994475-91994494 MsG0180005451.01.T01:three_prime_UTR 40.0%
! CCAACTACGCTAGGAATTTT+AGG + Chr1:91994835-91994854 None:intergenic 40.0%
! GAGTTCTGTCTGAAGCTATA+AGG + Chr1:91998543-91998562 None:intergenic 40.0%
! GTGAGATTGTTTCTCTGAAG+AGG - Chr1:91998757-91998776 MsG0180005451.01.T01:CDS 40.0%
! TAATTTGGGACAAAGTCGGT+TGG + Chr1:91996710-91996729 None:intergenic 40.0%
! TCAAATACAGGCTGGTCAAT+GGG - Chr1:91998621-91998640 MsG0180005451.01.T01:intron 40.0%
! TCTGAAATTTGCAGAGGTTG+AGG - Chr1:92001110-92001129 MsG0180005451.01.T01:intron 40.0%
! TGCGGGATTACTCTAAAAGA+AGG - Chr1:91994626-91994645 MsG0180005451.01.T01:three_prime_UTR 40.0%
! TTTGAGGGTTGATTCACCTT+GGG - Chr1:91995348-91995367 MsG0180005451.01.T01:intron 40.0%
!! CTTCAAGCTTTTAGAGGTCT+TGG + Chr1:91998964-91998983 None:intergenic 40.0%
!! GAACAGTTTTGTAGTGAGTG+AGG - Chr1:92000518-92000537 MsG0180005451.01.T01:intron 40.0%
!! GTCATATGGTAATGGTGTTG+TGG - Chr1:91995774-91995793 MsG0180005451.01.T01:CDS 40.0%
!! GTCTCTTTGGAACAAACACT+AGG - Chr1:91995324-91995343 MsG0180005451.01.T01:intron 40.0%
!!! CTCACTTTTGAGATTTTCGG+TGG + Chr1:91998742-91998761 None:intergenic 40.0%
!!! GCAAGACACTGGTTTTTTTG+TGG - Chr1:91995101-91995120 MsG0180005451.01.T01:intron 40.0%
!!! TTTTTTTCCCCACCTCTTGT+TGG - Chr1:91995869-91995888 MsG0180005451.01.T01:CDS 40.0%
AAAAGAAGGCCAAGGGTGAT+TGG - Chr1:91994640-91994659 MsG0180005451.01.T01:three_prime_UTR 45.0%
AAGACATTCCGATGGCTGAA+GGG - Chr1:91994880-91994899 MsG0180005451.01.T01:CDS 45.0%
AAGAGACAATGAGGCTGCTA+AGG - Chr1:92000204-92000223 MsG0180005451.01.T01:intron 45.0%
AAGAGCAACAAGGTGGTTGA+TGG - Chr1:91994951-91994970 MsG0180005451.01.T01:CDS 45.0%
AAGGGAACAAGGGATTCAGA+TGG + Chr1:92000846-92000865 None:intergenic 45.0%
AATGTCTTCCGCCTTCTTGA+AGG + Chr1:91994868-91994887 None:intergenic 45.0%
ACAACTTGATGTGTGGAGCA+AGG + Chr1:91995654-91995673 None:intergenic 45.0%
AGATAGAGGGGCTGAAACAA+GGG - Chr1:91995260-91995279 MsG0180005451.01.T01:intron 45.0%
AGGATTGAGTCCCTTGGTTA+CGG - Chr1:91995381-91995400 MsG0180005451.01.T01:intron 45.0%
AGGTCAATTTGGACCGAACT+GGG - Chr1:91995517-91995536 MsG0180005451.01.T01:intron 45.0%
ATCAAATGGCATCAGTCCTG+GGG - Chr1:91998500-91998519 MsG0180005451.01.T01:CDS 45.0%
ATGAATTGCGGAACCACAAC+AGG - Chr1:91999789-91999808 MsG0180005451.01.T01:intron 45.0%
CAACTTGATGTGTGGAGCAA+GGG + Chr1:91995653-91995672 None:intergenic 45.0%
CAAGACAAATCAACGGTCTC+AGG - Chr1:91998859-91998878 MsG0180005451.01.T01:intron 45.0%
CACCATGACATCTTCAACAC+GGG + Chr1:91994699-91994718 None:intergenic 45.0%
CAGTTTGCAGAAAGAACAGG+TGG - Chr1:92000057-92000076 MsG0180005451.01.T01:intron 45.0%
CATCAAATGGCATCAGTCCT+GGG - Chr1:91998499-91998518 MsG0180005451.01.T01:CDS 45.0%
CATGACCTCAAGAGACAATG+AGG - Chr1:92000195-92000214 MsG0180005451.01.T01:intron 45.0%
CCTAGTGTAGTTAGACTGCA+AGG - Chr1:91994744-91994763 MsG0180005451.01.T01:three_prime_UTR 45.0%
CCTTGCAGTCTAACTACACT+AGG + Chr1:91994747-91994766 None:intergenic 45.0%
CTATGCTCTATGGTGAGCAA+GGG - Chr1:91994567-91994586 MsG0180005451.01.T01:three_prime_UTR 45.0%
CTCAAGAATAACAGAGGACG+AGG - Chr1:92000166-92000185 MsG0180005451.01.T01:intron 45.0%
CTGTACTGCCATAGCTCAAT+TGG + Chr1:91998221-91998240 None:intergenic 45.0%
GAAAGATTACAGGAGCCTTC+AGG - Chr1:91998705-91998724 MsG0180005451.01.T01:CDS 45.0%
GAACAAGGGAAAGAGCAACA+AGG - Chr1:91994941-91994960 MsG0180005451.01.T01:CDS 45.0%
GAAGAGGCAGGCAGAATTAT+CGG - Chr1:91998773-91998792 MsG0180005451.01.T01:CDS 45.0%
GACTGCAAGTACCTTCAAGA+AGG - Chr1:91994854-91994873 MsG0180005451.01.T01:CDS 45.0%
GATGTCATGGTGAATGCTTG+TGG - Chr1:91994707-91994726 MsG0180005451.01.T01:three_prime_UTR 45.0%
GCTGGGATTTGGGTAGAATT+AGG - Chr1:91995410-91995429 MsG0180005451.01.T01:intron 45.0%
GGAACAAACACTAGGGTTTG+AGG - Chr1:91995332-91995351 MsG0180005451.01.T01:intron 45.0%
GGAGATGAATAATGTGGGTG+TGG + Chr1:91997654-91997673 None:intergenic 45.0%
GGATTTGGGTAGAATTAGGC+GGG - Chr1:91995414-91995433 MsG0180005451.01.T01:intron 45.0%
GGCTCCTGTAATCTTTCTCT+CGG + Chr1:91998702-91998721 None:intergenic 45.0%
GGGATTAGGGTGTAAACTTG+TGG - Chr1:91994900-91994919 MsG0180005451.01.T01:CDS 45.0%
GGGATTTGGGTAGAATTAGG+CGG - Chr1:91995413-91995432 MsG0180005451.01.T01:intron 45.0%
GGTACATTGTCAAGGTAACC+AGG - Chr1:92001410-92001429 MsG0180005451.01.T01:intron 45.0%
GGTCCAAATTGACCTAGTCT+GGG + Chr1:91995512-91995531 None:intergenic 45.0%
GTATGACTATGGAGGACCTT+GGG - Chr1:91994542-91994561 MsG0180005451.01.T01:three_prime_UTR 45.0%
GTCCAAATTGACCTAGTCTG+GGG + Chr1:91995511-91995530 None:intergenic 45.0%
TACCGTACGGACCGAAAAAT+TGG + Chr1:92001394-92001413 None:intergenic 45.0%
TAGGTCAATTTGGACCGAAC+TGG - Chr1:91995516-91995535 MsG0180005451.01.T01:intron 45.0%
TCCAAATTGACCTAGTCTGG+GGG + Chr1:91995510-91995529 None:intergenic 45.0%
TCTTGATCCAACAAGAGGTG+GGG + Chr1:91995879-91995898 None:intergenic 45.0%
TGATGCATCGGATCTACTCT+TGG + Chr1:91998484-91998503 None:intergenic 45.0%
TGATGCTGAACGCCTTACAA+AGG - Chr1:92000996-92001015 MsG0180005451.01.T01:intron 45.0%
TGCAAGTACCTTCAAGAAGG+CGG - Chr1:91994857-91994876 MsG0180005451.01.T01:CDS 45.0%
TGGAAGGATATACTGCCGAA+AGG - Chr1:91998043-91998062 MsG0180005451.01.T01:intron 45.0%
TGGGTGTGGTTGTTGAGAAT+TGG + Chr1:91997640-91997659 None:intergenic 45.0%
TTGACGTCGCATATTAGGAC+AGG - Chr1:92000311-92000330 MsG0180005451.01.T01:intron 45.0%
! ACAAAGGCACAGGGATGAAA+AGG - Chr1:91999976-91999995 MsG0180005451.01.T01:intron 45.0%
! ATCGTCATTGGTCTCCATCA+AGG - Chr1:91999502-91999521 MsG0180005451.01.T01:intron 45.0%
! CACCGGTAATGGTATGACTA+TGG - Chr1:91994531-91994550 MsG0180005451.01.T01:three_prime_UTR 45.0%
! CGGTAATGGTATGACTATGG+AGG - Chr1:91994534-91994553 MsG0180005451.01.T01:three_prime_UTR 45.0%
! GACTGCACGGTCCAATTTTT+CGG - Chr1:92001380-92001399 MsG0180005451.01.T01:intron 45.0%
! GATGGGAGGTTTCAGTTTTG+AGG - Chr1:91995079-91995098 MsG0180005451.01.T01:intron 45.0%
! GATTGTTTCTCTGAAGAGGC+AGG - Chr1:91998761-91998780 MsG0180005451.01.T01:CDS 45.0%
! GTCAAATACAGGCTGGTCAA+TGG - Chr1:91998620-91998639 MsG0180005451.01.T01:intron 45.0%
! GTTGGTTTCCCAACATCATC+TGG + Chr1:91997217-91997236 None:intergenic 45.0%
! GTTTGAGGGTTGATTCACCT+TGG - Chr1:91995347-91995366 MsG0180005451.01.T01:intron 45.0%
! TCAATGGGTTCAGCATCAGA+TGG - Chr1:91998636-91998655 MsG0180005451.01.T01:intron 45.0%
! TGAAGATGCACAAAGGCACA+GGG - Chr1:91999967-91999986 MsG0180005451.01.T01:intron 45.0%
! TTGAAGATGCACAAAGGCAC+AGG - Chr1:91999966-91999985 MsG0180005451.01.T01:intron 45.0%
!! ACTTGGTGTAGTGGGAACAA+GGG - Chr1:91994927-91994946 MsG0180005451.01.T01:CDS 45.0%
!! CAACAAGGTGGTTGATGGTT+TGG - Chr1:91994956-91994975 MsG0180005451.01.T01:CDS 45.0%
!! CTTTGGTGCCAGATGATGTT+GGG - Chr1:91997206-91997225 MsG0180005451.01.T01:CDS 45.0%
!! GTCCAATTTTTCGGTCCGTA+CGG - Chr1:92001389-92001408 MsG0180005451.01.T01:intron 45.0%
!! TACTTGGTGTAGTGGGAACA+AGG - Chr1:91994926-91994945 MsG0180005451.01.T01:CDS 45.0%
!! TCTTTGGTGCCAGATGATGT+TGG - Chr1:91997205-91997224 MsG0180005451.01.T01:CDS 45.0%
!! TGCAGTGTTGCGTTGTTTTG+TGG + Chr1:91996822-91996841 None:intergenic 45.0%
!!! CTGGTTTTTTTGTGGCACGA+TGG - Chr1:91995109-91995128 MsG0180005451.01.T01:intron 45.0%
!!! TCAGTTTTGAGGCAAGACAC+TGG - Chr1:91995090-91995109 MsG0180005451.01.T01:intron 45.0%
AAGTGGCGGTCCTAAAGGAA+AGG - Chr1:92001031-92001050 MsG0180005451.01.T01:intron 50.0%
ACCATAGAGCATAGCACCCA+AGG + Chr1:91994561-91994580 None:intergenic 50.0%
ACCCTAATCCCTTCAGCCAT+CGG + Chr1:91994891-91994910 None:intergenic 50.0%
ACCTCAACCTCTTCAGCCAT+CGG + Chr1:91994795-91994814 None:intergenic 50.0%
ACTTGCAGTCCAACTACGCT+AGG + Chr1:91994844-91994863 None:intergenic 50.0%
AGATTACGCTCAGCTTGAGG+TGG - Chr1:91994499-91994518 MsG0180005451.01.T01:three_prime_UTR 50.0%
AGCAGCCTCATTGTCTCTTG+AGG + Chr1:92000203-92000222 None:intergenic 50.0%
AGGCTACAACATCATACCCC+TGG + Chr1:92001431-92001450 None:intergenic 50.0%
CAAGGGAAAGAGCAACAAGG+TGG - Chr1:91994944-91994963 MsG0180005451.01.T01:CDS 50.0%
CAGAACTCAATGCCACCAAG+AGG - Chr1:91998555-91998574 MsG0180005451.01.T01:intron 50.0%
CAGGGACTCTTCTGCTTGAA+TGG + Chr1:91999639-91999658 None:intergenic 50.0%
CATGATCTGCAGAAGCAACG+TGG - Chr1:91995032-91995051 MsG0180005451.01.T01:intron 50.0%
CGGTCCAAATTGACCTAGTC+TGG + Chr1:91995513-91995532 None:intergenic 50.0%
GAAGACATTCCGATGGCTGA+AGG - Chr1:91994879-91994898 MsG0180005451.01.T01:CDS 50.0%
GAATGAAGTGGCGGTCCTAA+AGG - Chr1:92001026-92001045 MsG0180005451.01.T01:intron 50.0%
GACTACATGTGGCCCATATG+AGG + Chr1:92001451-92001470 None:intergenic 50.0%
GAGATAGAGGGGCTGAAACA+AGG - Chr1:91995259-91995278 MsG0180005451.01.T01:intron 50.0%
GAGGTTGAGGTAAAGGCTTG+TGG - Chr1:91994804-91994823 MsG0180005451.01.T01:three_prime_UTR 50.0%
GCAAGGACTCTTCGAGAAGA+CGG - Chr1:91994761-91994780 MsG0180005451.01.T01:three_prime_UTR 50.0%
GCAGTCAGCGCAGCAAATTT+CGG + Chr1:92001366-92001385 None:intergenic 50.0%
GCATCAAATGGCATCAGTCC+TGG - Chr1:91998498-91998517 MsG0180005451.01.T01:CDS 50.0%
GCTATGCTCTATGGTGAGCA+AGG - Chr1:91994566-91994585 MsG0180005451.01.T01:three_prime_UTR 50.0%
GGAGTTGAACACACCGGTAA+TGG - Chr1:91994520-91994539 MsG0180005451.01.T01:three_prime_UTR 50.0%
GGATTGAGTCCCTTGGTTAC+GGG - Chr1:91995382-91995401 MsG0180005451.01.T01:intron 50.0%
GGCTGAAGAGGTTGAGGTAA+AGG - Chr1:91994797-91994816 MsG0180005451.01.T01:three_prime_UTR 50.0%
GGTAGATTACGCTCAGCTTG+AGG - Chr1:91994496-91994515 MsG0180005451.01.T01:three_prime_UTR 50.0%
GGTATGACTATGGAGGACCT+TGG - Chr1:91994541-91994560 MsG0180005451.01.T01:three_prime_UTR 50.0%
GTCCCGTGTTGAAGATGTCA+TGG - Chr1:91994694-91994713 MsG0180005451.01.T01:three_prime_UTR 50.0%
GTCCGTACGGTACATTGTCA+AGG - Chr1:92001402-92001421 MsG0180005451.01.T01:intron 50.0%
GTTACAAGCACTTCGGAAGC+AGG - Chr1:91998803-91998822 MsG0180005451.01.T01:CDS 50.0%
TATCGCATCTGAGCAGCTTC+AGG - Chr1:91999682-91999701 MsG0180005451.01.T01:intron 50.0%
TCCCCCAGACTAGGTCAATT+TGG - Chr1:91995506-91995525 MsG0180005451.01.T01:intron 50.0%
TCCGATGGCTGAAGGGATTA+GGG - Chr1:91994887-91994906 MsG0180005451.01.T01:CDS 50.0%
TCCTTGCATCCAATCACCCT+TGG + Chr1:91994652-91994671 None:intergenic 50.0%
TGAGGTGGAGTTGAACACAC+CGG - Chr1:91994514-91994533 MsG0180005451.01.T01:three_prime_UTR 50.0%
TTACAGGAGCCTTCAGGCAA+TGG - Chr1:91998711-91998730 MsG0180005451.01.T01:CDS 50.0%
TTCCGATGGCTGAAGGGATT+AGG - Chr1:91994886-91994905 MsG0180005451.01.T01:CDS 50.0%
TTGGCCTCAACTGTTCCTCT+TGG + Chr1:91998573-91998592 None:intergenic 50.0%
! ACCTTGGGTGCTATGCTCTA+TGG - Chr1:91994557-91994576 MsG0180005451.01.T01:three_prime_UTR 50.0%
! TGGGGAAGATAATGGTGCTG+TGG - Chr1:91998167-91998186 MsG0180005451.01.T01:intron 50.0%
!! AATTTGCTGCGCTGACTGCA+CGG - Chr1:92001367-92001386 MsG0180005451.01.T01:intron 50.0%
!! GTGGAGCTACTTGGTGTAGT+GGG - Chr1:91994919-91994938 MsG0180005451.01.T01:CDS 50.0%
!! TGTGGAGCTACTTGGTGTAG+TGG - Chr1:91994918-91994937 MsG0180005451.01.T01:CDS 50.0%
ACGGGAAGAGGCTGGGATTT+GGG - Chr1:91995400-91995419 MsG0180005451.01.T01:intron 55.0%
AGACGTTCCGATGGCTGAAG+AGG - Chr1:91994785-91994804 MsG0180005451.01.T01:three_prime_UTR 55.0%
AGTCCCTTGGTTACGGGAAG+AGG - Chr1:91995388-91995407 MsG0180005451.01.T01:intron 55.0%
CAGCCTCTTCCCGTAACCAA+GGG + Chr1:91995394-91995413 None:intergenic 55.0%
CAGTCCTGGGGTAGCTTCAT+GGG - Chr1:91998512-91998531 MsG0180005451.01.T01:CDS 55.0%
CCTTGAACCTCCACCTCAAC+CGG + Chr1:91994439-91994458 None:intergenic 55.0%
CTTGGTTACGGGAAGAGGCT+GGG - Chr1:91995393-91995412 MsG0180005451.01.T01:intron 55.0%
GAAGACGGAAGACGTTCCGA+TGG - Chr1:91994776-91994795 MsG0180005451.01.T01:three_prime_UTR 55.0%
GAAGGCGGAAGACATTCCGA+TGG - Chr1:91994872-91994891 MsG0180005451.01.T01:CDS 55.0%
GCCAAGGGTGATTGGATGCA+AGG - Chr1:91994648-91994667 MsG0180005451.01.T01:three_prime_UTR 55.0%
GCCACCAAGAGGAACAGTTG+AGG - Chr1:91998566-91998585 MsG0180005451.01.T01:intron 55.0%
GCCTCAACTGTTCCTCTTGG+TGG + Chr1:91998570-91998589 None:intergenic 55.0%
GCGGAACCACAACAGGCTTA+TGG - Chr1:91999796-91999815 MsG0180005451.01.T01:intron 55.0%
GGAAGTTCAACGTGGCACGA+TGG - Chr1:91995130-91995149 MsG0180005451.01.T01:intron 55.0%
GGAATGGATGCTGCAAGCAC+TGG - Chr1:92000777-92000796 MsG0180005451.01.T01:intron 55.0%
GGCACGATGGAAGTTCAACG+TGG - Chr1:91995122-91995141 MsG0180005451.01.T01:intron 55.0%
GTGGCATTGCCATTGCCTGA+AGG + Chr1:91998723-91998742 None:intergenic 55.0%
TACGGGAAGAGGCTGGGATT+TGG - Chr1:91995399-91995418 MsG0180005451.01.T01:intron 55.0%
TCAGTCCTGGGGTAGCTTCA+TGG - Chr1:91998511-91998530 MsG0180005451.01.T01:CDS 55.0%
TCATCCCATGAAGCTACCCC+AGG + Chr1:91998519-91998538 None:intergenic 55.0%
TCCGATGGCTGAAGAGGTTG+AGG - Chr1:91994791-91994810 MsG0180005451.01.T01:three_prime_UTR 55.0%
! TGATCTACCGGTTGAGGTGG+AGG - Chr1:91994429-91994448 MsG0180005451.01.T01:three_prime_UTR 55.0%
AAGCAACGTGGCACGATGGC+TGG - Chr1:91995044-91995063 MsG0180005451.01.T01:intron 60.0%
AGCAACGTGGCACGATGGCT+GGG - Chr1:91995045-91995064 MsG0180005451.01.T01:intron 60.0%
CCAGCCTCTTCCCGTAACCA+AGG + Chr1:91995395-91995414 None:intergenic 60.0%
CCGGTTGAGGTGGAGGTTCA+AGG - Chr1:91994436-91994455 MsG0180005451.01.T01:three_prime_UTR 60.0%
CCTTGGTTACGGGAAGAGGC+TGG - Chr1:91995392-91995411 MsG0180005451.01.T01:intron 60.0%
CGCATCTGAGCAGCTTCAGG+AGG - Chr1:91999685-91999704 MsG0180005451.01.T01:intron 60.0%
GCAGAAGCAACGTGGCACGA+TGG - Chr1:91995040-91995059 MsG0180005451.01.T01:intron 60.0%
AACGTGGCACGATGGTGCGC+TGG - Chr1:91995138-91995157 MsG0180005451.01.T01:intron 65.0%
GCTGCTCTCTCCCCCAGACT+AGG - Chr1:91995497-91995516 MsG0180005451.01.T01:intron 65.0%
GCTGGGCAACGTGGCACGAT+GGG - Chr1:91995062-91995081 MsG0180005451.01.T01:intron 65.0%
GGCACGATGGCTGGGCAACG+TGG - Chr1:91995053-91995072 MsG0180005451.01.T01:intron 70.0%
GGCTGGGCAACGTGGCACGA+TGG - Chr1:91995061-91995080 MsG0180005451.01.T01:intron 70.0%
GGGCAACGTGGCACGATGGG+AGG - Chr1:91995065-91995084 MsG0180005451.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 91994428 92001594 91994428 ID=MsG0180005451.01;Name=MsG0180005451.01
Chr1 mRNA 91994428 92001594 91994428 ID=MsG0180005451.01.T01;Parent=MsG0180005451.01;Name=MsG0180005451.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0.85|0.87|0.87|1|1|8|403|867
Chr1 exon 91994428 91995026 91994428 ID=MsG0180005451.01.T01:exon:49617;Parent=MsG0180005451.01.T01
Chr1 exon 91995202 91995245 91995202 ID=MsG0180005451.01.T01:exon:49616;Parent=MsG0180005451.01.T01
Chr1 exon 91995761 91997554 91995761 ID=MsG0180005451.01.T01:exon:49615;Parent=MsG0180005451.01.T01
Chr1 exon 91997759 91997858 91997759 ID=MsG0180005451.01.T01:exon:49614;Parent=MsG0180005451.01.T01
Chr1 exon 91997958 91997995 91997958 ID=MsG0180005451.01.T01:exon:49613;Parent=MsG0180005451.01.T01
Chr1 exon 91998432 91998554 91998432 ID=MsG0180005451.01.T01:exon:49612;Parent=MsG0180005451.01.T01
Chr1 exon 91998650 91998850 91998650 ID=MsG0180005451.01.T01:exon:49611;Parent=MsG0180005451.01.T01
Chr1 exon 92001487 92001594 92001487 ID=MsG0180005451.01.T01:exon:49610;Parent=MsG0180005451.01.T01
Chr1 CDS 92001487 92001594 92001487 ID=MsG0180005451.01.T01:cds;Parent=MsG0180005451.01.T01
Chr1 CDS 91998650 91998850 91998650 ID=MsG0180005451.01.T01:cds;Parent=MsG0180005451.01.T01
Chr1 CDS 91998432 91998554 91998432 ID=MsG0180005451.01.T01:cds;Parent=MsG0180005451.01.T01
Chr1 CDS 91997958 91997995 91997958 ID=MsG0180005451.01.T01:cds;Parent=MsG0180005451.01.T01
Chr1 CDS 91997759 91997858 91997759 ID=MsG0180005451.01.T01:cds;Parent=MsG0180005451.01.T01
Chr1 CDS 91995761 91997554 91995761 ID=MsG0180005451.01.T01:cds;Parent=MsG0180005451.01.T01
Chr1 CDS 91995202 91995245 91995202 ID=MsG0180005451.01.T01:cds;Parent=MsG0180005451.01.T01
Chr1 CDS 91994831 91995026 91994831 ID=MsG0180005451.01.T01:cds;Parent=MsG0180005451.01.T01
Chr1 three_prime_UTR 91994428 91994830 91994428 ID=MsG0180005451.01.T01:three_prime_utr;Parent=MsG0180005451.01.T01
Gene Sequence

>MsG0180005451.01.T01

ATGATCTACCGGTTGAGGTGGAGGTTCAAGGTTGAAGACATAGTGGGATGTACGCATTTGCTAGTTGAGGTAGATTACGCTCAGCTTGAGGTGGAGTTGAACACACCGGTTCCAAAGATGAAAAAGAATGCATTGATGGTATCTTTGGTGCCAGATGATGTTGGGAAACCAACAGTGAAACTAGAGAAAACTGCTGTTCAAGATGGGACTTGTTTATGGGAGAATCCAATTTTTGAATCTGTTAAACTTGTTAGGGATTCAAAATCAGGAATTCTACATGAGAAAATCTACCATTTCATTGTTGCAACTGGTTCTTCAAAATCTGGCTACTTGGGAGAAGCTTCAATTGATTTTGCTGATTTTTTAACAGAAACTGAGCCAATTACTGTTTCTCTGCCCTTGAAATTTGCAAATTCGGGCGTAGTTTTACATGTAACTATTCAGAATGTGGAAGGATATACTGCCGAAAGAAATGGGGAAGATAATGGTGCTGTGGAAATTTATAATGATGGAAGCTTGAAACACCAATTGAGCTATGGCAGTACAGATGAAAGTTACAATCTTGATGAAAATAGCAACTTGGCCAAGAGTAGATCCGATGCATCAAATGGCATCAGTCCTGGGGTAGCTTCATGGGATGACCCTTATAGCTTCAGACAGAACTCAATGCCACCAAGAGGAACAGTTGAGGCCAATGCAACACAAAATCAAGTGCATAAGAGGTCAAATACAGGCTGGTCAATGGGTTCAGCATCAGATGGAAGTTTAGGTGATTGGACAAACGGAACAGAAGACAATTTTCCGAGAGAAAGATTACAGGAGCCTTCAGGCAATGGCAATGCCACCGAAAATCTCAAAAGTGAGATTGTTTCTCTGAAGAGGCAGGCAGAATTATCGGAACTAGAGTTACAAGCACTTCGGAAGCAGGTAGAAAAAGAAAGCAGTCGGGGACAGAATTTATCAAGACAAATCAACGGTCTCAGGGACGAAAGAGATTCACTCAAAACTAAATATGAGCAACTCAAGTCCCAACAGAACTTCAATAATAGTAGTAATAATGAGACCAAGACCTCTAAAAGCTTGAAGTCTGATATTGATAATACTAGGCTTCAGTTAGATGCAATAAAGGAAGAGCTTGTTTATGAAAAAGAAATGAGTGGAAATCTTCAATTGCAACTGCAGAAAACACAGAACTCAAATTCTGAACTTCTTTTGGCTGTGACAGACCTTGAAGCAATGCTAGAACAAAAGAATAAGGAAATATTGGATCTATCTTCCAATAGGAAATCTCAAAAGATTACTAAAGAGCATGATAATGACACAGAATTAAATGTTTTGCGGCAGAAGATTGCAGACCAGAATAGTGAAATTGAGAATTGTTATAAGCAACGCGAGGAGCTAAGCGAGCTTATAAAAGAGCTCACAGTGGAGTATGATCTTCTTAAGAATGAAAATGTGGATATCTCTCTGAGATTAAAGCAAGATGAAGCTCAACATATCATGTTACAAAATGAACACTCGGCTTCTTTAGTTACAATACAACAACTTGAATCCCAAGTGAAGAGACTAGAAGAAAAGATAGAGATGCAGGAAGATGAATTTTCATCGTCATTGGTCTCCATCAAGGAACTTGAAAATCAAGTTAAGTCTTTGGAGAAAGAACTGAGAATACAGGCAGATAAATTTGAAGATGAACTCCAGGCTATGCAAAATGAAAAAACTGAGCAGGAAGAACGGGCCATTCAAGCAGAAGAGTCCCTGAGAAAGACGAGACACAATAATGCTATCGCATCTGAGCAGCTTCAGGAGGAATATAAATTGCTTTCTGTTGAAATGTCATGCAAAGTTGAAGAGAATGAAAAGATGATAACGAAAGCAATCGAAGAAGCTGATGAATTGCGGAACCACAACAGGCTTATGGAAGAAATGCTCCAGAAATGCAATCAAGAGCTCAGGCAAATATCAGATCAACATGAATTGAAAGTGGAAGAGCTCTTGAAACAAATAAGTACAAAAGAAAAAACAATGGAACAGATGTCGCAAGAGTTAGATGTGAAAACTAAAGAACTTGAAGATGCACAAAGGCACAGGGATGAAAAGGATGCTGCATTATCAAAGCAAATTCAAATGCTTGAGATCCAGCACAATGAAATGAAACACAGTTTGCAGAAAGAACAGGTGGACAGAGAAAATATGAAGAAACATATATCTCAATTAGAAGGAGAGGTTAAGAAGAAAGAAGCAGAATTAAATGCTATGGAAAAGAAGCTCAAGAATAACAGAGGACGAGGTGCAGTCATGACCTCAAGAGACAATGAGGCTGCTAAGGCAAATGCAAAGAAATCAAAATCAGAAATGCATAAGGGAATGGATGCTGCAAGCACTGGTATTAGCAAGTCTGAAGGAAGTGATGCTGAACGCCTTACAAAGGAATTATTGAATGAAGTGGCGGTCCTAAAGGAAAGGAACACGAATATGGAAACTGAACTGAAAGAAATGGAAGAAAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTTGAGGGAGAAAGACAACAGCTTGTTATGGCTGTACGTAATCTCAAGAATGGAAAGAAGAACTAG

Protein sequence

>MsG0180005451.01.T01

MIYRLRWRFKVEDIVGCTHLLVEVDYAQLEVELNTPVPKMKKNALMVSLVPDDVGKPTVKLEKTAVQDGTCLWENPIFESVKLVRDSKSGILHEKIYHFIVATGSSKSGYLGEASIDFADFLTETEPITVSLPLKFANSGVVLHVTIQNVEGYTAERNGEDNGAVEIYNDGSLKHQLSYGSTDESYNLDENSNLAKSRSDASNGISPGVASWDDPYSFRQNSMPPRGTVEANATQNQVHKRSNTGWSMGSASDGSLGDWTNGTEDNFPRERLQEPSGNGNATENLKSEIVSLKRQAELSELELQALRKQVEKESSRGQNLSRQINGLRDERDSLKTKYEQLKSQQNFNNSSNNETKTSKSLKSDIDNTRLQLDAIKEELVYEKEMSGNLQLQLQKTQNSNSELLLAVTDLEAMLEQKNKEILDLSSNRKSQKITKEHDNDTELNVLRQKIADQNSEIENCYKQREELSELIKELTVEYDLLKNENVDISLRLKQDEAQHIMLQNEHSASLVTIQQLESQVKRLEEKIEMQEDEFSSSLVSIKELENQVKSLEKELRIQADKFEDELQAMQNEKTEQEERAIQAEESLRKTRHNNAIASEQLQEEYKLLSVEMSCKVEENEKMITKAIEEADELRNHNRLMEEMLQKCNQELRQISDQHELKVEELLKQISTKEKTMEQMSQELDVKTKELEDAQRHRDEKDAALSKQIQMLEIQHNEMKHSLQKEQVDRENMKKHISQLEGEVKKKEAELNAMEKKLKNNRGRGAVMTSRDNEAAKANAKKSKSEMHKGMDAASTGISKSEGSDAERLTKELLNEVAVLKERNTNMETELKEMEERYSEISLKFAEVEGERQQLVMAVRNLKNGKKN*