AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005443.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005443.01.T01 MTR_1g100633 92.272 854 19 2 1 808 1 853 0.0 1570
MsG0180005443.01.T01 MTR_1g100633 91.635 789 19 2 1 743 1 788 0.0 1444
MsG0180005443.01.T01 MTR_1g100633 91.484 775 19 2 1 729 1 774 0.0 1416
MsG0180005443.01.T01 MTR_8g097350 37.546 538 294 7 145 652 230 755 6.31e-87 297
MsG0180005443.01.T01 MTR_8g097350 51.111 135 64 1 1 133 1 135 2.37e-38 154
MsG0180005443.01.T01 MTR_8g097350 35.417 192 93 4 645 807 842 1031 4.99e-17 86.7
MsG0180005443.01.T01 MTR_8g097350 37.546 538 294 7 145 652 233 758 6.34e-87 296
MsG0180005443.01.T01 MTR_8g097350 51.111 135 64 1 1 133 1 135 2.60e-38 154
MsG0180005443.01.T01 MTR_5g010520 36.957 552 306 8 166 681 244 789 1.13e-83 287
MsG0180005443.01.T01 MTR_5g010520 50.000 136 65 2 1 133 1 136 3.36e-39 157
MsG0180005443.01.T01 MTR_5g010520 36.957 552 306 8 166 681 244 789 1.01e-82 286
MsG0180005443.01.T01 MTR_5g010520 50.000 136 65 2 1 133 1 136 2.68e-39 157
MsG0180005443.01.T01 MTR_5g010520 72.727 55 15 0 753 807 1007 1061 5.13e-15 80.1
MsG0180005443.01.T01 MTR_0415s0010 41.702 235 119 6 145 373 51 273 1.99e-37 142
MsG0180005443.01.T01 MTR_0415s0020 40.000 210 126 0 443 652 18 227 5.03e-35 137
MsG0180005443.01.T01 MTR_3g073620 44.531 128 70 1 5 131 7 134 5.50e-32 135
MsG0180005443.01.T01 MTR_1g062200 27.171 449 234 16 1 367 1 438 3.46e-21 100
MsG0180005443.01.T01 MTR_1g062200 27.171 449 234 16 1 367 1 438 4.46e-21 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005443.01.T01 AT5G52280 41.676 907 374 18 1 807 1 852 0.0 563
MsG0180005443.01.T01 AT5G41140 36.536 739 338 15 183 807 254 975 1.18e-103 342
MsG0180005443.01.T01 AT5G41140 52.206 136 60 3 1 131 1 136 3.07e-39 157
MsG0180005443.01.T01 AT5G41140 36.290 744 340 15 183 807 254 982 1.70e-103 342
MsG0180005443.01.T01 AT5G41140 52.206 136 60 3 1 131 1 136 2.95e-39 157
MsG0180005443.01.T01 AT1G63300 41.767 498 258 6 217 686 284 777 3.41e-87 298
MsG0180005443.01.T01 AT1G22060 25.149 672 374 16 8 570 11 662 7.62e-35 144
MsG0180005443.01.T01 AT1G22060 25.149 672 374 16 8 570 11 662 7.62e-35 144

Find 160 sgRNAs with CRISPR-Local

Find 494 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGCTCTTGATTGCATTTC+TGG 0.028652 1:+91940072 None:intergenic
TGATGCTTTGATTGAGAATT+TGG 0.128846 1:-91938371 MsG0180005443.01.T01:three_prime_UTR
CTCAAATTCTGAACTTCTTT+TGG 0.164026 1:-91940810 MsG0180005443.01.T01:CDS
TCTTATAAGCTAAACATTAT+TGG 0.177334 1:+91943105 None:intergenic
TTCAAGATGGGACTTGTTTA+TGG 0.179533 1:-91942646 MsG0180005443.01.T01:CDS
GCCCTTGAAATTTGCAAATT+CGG 0.204924 1:-91942352 MsG0180005443.01.T01:CDS
TTCAGCTAGATTAATAAATA+TGG 0.240991 1:+91943041 None:intergenic
TGAAAATCAAGTTAAGTCTT+TGG 0.245483 1:-91940372 MsG0180005443.01.T01:CDS
CCCTTGAAATTTGCAAATTC+GGG 0.262697 1:-91942351 MsG0180005443.01.T01:CDS
TATTCGTGTTCCTTTCCTTT+AGG 0.264361 1:+91938860 None:intergenic
TTGAATCTGTTAAACTTGTT+AGG 0.276431 1:-91942610 MsG0180005443.01.T01:CDS
CAGGGACTCTTCTGCTTGAA+TGG 0.294165 1:+91940265 None:intergenic
GATCAAAGCTGTATTCAAAT+TGG 0.298730 1:-91942986 MsG0180005443.01.T01:CDS
AATTCTCTATTTCACTATTC+TGG 0.302012 1:+91940648 None:intergenic
GAGTTCTGTCTGAAGCTATA+AGG 0.304087 1:+91941361 None:intergenic
ACAAAAGAATAAGGAAATAT+TGG 0.304705 1:-91940759 MsG0180005443.01.T01:CDS
AAGTCACACTCCTTATTTCT+TGG 0.311739 1:+91943252 None:intergenic
CTTGTTAGGGATTCAAAATC+AGG 0.313625 1:-91942596 MsG0180005443.01.T01:CDS
TCTCAATCAACCAAGAAATA+AGG 0.316778 1:-91943262 MsG0180005443.01.T01:five_prime_UTR
TTGTAGGGTTCTTCAAAATC+TGG 0.322934 1:-91942444 MsG0180005443.01.T01:intron
TATTGTGTCTCGTCTTTCTC+AGG 0.325981 1:+91940246 None:intergenic
AAAGGAAAGGAACACGAATA+TGG 0.334534 1:-91938857 MsG0180005443.01.T01:CDS
GAATGCATTGATGGTATCTT+TGG 0.340165 1:-91942717 MsG0180005443.01.T01:CDS
AAGGGCAGAGAAACAGTAAT+TGG 0.340819 1:+91942369 None:intergenic
AATGCTAGAACAAAAGAATA+AGG 0.342812 1:-91940768 MsG0180005443.01.T01:CDS
AGTTGATGTACAGGATAAAT+AGG 0.345911 1:+91938583 None:intergenic
TTCTTCAAAATCTGGCTACT+TGG 0.349811 1:-91942436 MsG0180005443.01.T01:CDS
TATGATGTTGTAGCCTCATA+TGG 0.360562 1:-91938466 MsG0180005443.01.T01:three_prime_UTR
TCAGCATCAGATGGAAGTTT+AGG 0.361910 1:-91941256 MsG0180005443.01.T01:CDS
TCAGTCCTGGGGTAGCTTCA+TGG 0.364313 1:-91941390 MsG0180005443.01.T01:CDS
TTTGTTCTAGCATTGCTTCA+AGG 0.366988 1:+91940777 None:intergenic
TTGTAACCCCTGTATATGTT+TGG 0.372707 1:+91938682 None:intergenic
CATTCAATAATTCCTTTGTA+AGG 0.376479 1:+91938893 None:intergenic
CAGATGGAAGTTTAGGTGAT+TGG 0.379221 1:-91941249 MsG0180005443.01.T01:CDS
TCAAGATGGGACTTGTTTAT+GGG 0.381612 1:-91942645 MsG0180005443.01.T01:CDS
GCCTCAACTGTTCCTCTTGG+TGG 0.382303 1:+91941334 None:intergenic
TATCGCATCTGAGCAGCTTC+AGG 0.385097 1:-91940219 MsG0180005443.01.T01:CDS
CACAAAATCAAGTGCATAAG+AGG 0.388926 1:-91941303 MsG0180005443.01.T01:CDS
GCTTCAGTTAGATGCAATAA+AGG 0.391713 1:-91940897 MsG0180005443.01.T01:CDS
GAAGAGGCAGGCAGAATTAT+CGG 0.394976 1:-91941128 MsG0180005443.01.T01:CDS
GCGGAACCACAACAGGCTTA+TGG 0.395493 1:-91940105 MsG0180005443.01.T01:CDS
CAAGACAAATCAACGGTCTC+AGG 0.396783 1:-91941042 MsG0180005443.01.T01:CDS
GAAGAACTAGAACTCTTTGC+AGG 0.398652 1:-91938719 MsG0180005443.01.T01:exon
TGAATCTGTTAAACTTGTTA+GGG 0.399721 1:-91942609 MsG0180005443.01.T01:CDS
GGAAACTGAACTGAAAGAAA+TGG 0.401729 1:-91938836 MsG0180005443.01.T01:CDS
GTTTCATACCAAACATATAC+AGG 0.407755 1:-91938690 MsG0180005443.01.T01:three_prime_UTR
TATTGGATCTATCTTCCAAT+AGG 0.408356 1:-91940742 MsG0180005443.01.T01:CDS
TTTCTTCTAGTCTCTTCACT+TGG 0.412470 1:+91940450 None:intergenic
AAACATATATCTCAATTAGA+AGG 0.412778 1:-91939804 MsG0180005443.01.T01:CDS
GCCCGAATTTGCAAATTTCA+AGG 0.415467 1:+91942350 None:intergenic
GCATCAAATGGCATCAGTCC+TGG 0.418524 1:-91941403 MsG0180005443.01.T01:CDS
TGTGTTTCATTTCATTGTGC+TGG 0.418901 1:+91939865 None:intergenic
GCAGTCAGCGCAGCAAATTT+CGG 0.421568 1:+91938538 None:intergenic
GAAAGATTACAGGAGCCTTC+AGG 0.428828 1:-91941196 MsG0180005443.01.T01:CDS
CTCATTGTCTCTTGAGGTCA+TGG 0.434335 1:+91939707 None:intergenic
ATTATTATTGAAGTTCTGTT+GGG 0.435565 1:+91940976 None:intergenic
TTACAGTTGCAACAATGAAA+TGG 0.436006 1:+91942552 None:intergenic
AGTTCTGTCTGAAGCTATAA+GGG 0.436569 1:+91941362 None:intergenic
ATGAATTGCGGAACCACAAC+AGG 0.437283 1:-91940112 MsG0180005443.01.T01:CDS
ATAAAACAGACTATGTAGTC+TGG 0.441515 1:-91938333 MsG0180005443.01.T01:three_prime_UTR
GTCAAATACAGGCTGGTCAA+TGG 0.441874 1:-91941281 MsG0180005443.01.T01:CDS
CAGTCCTGGGGTAGCTTCAT+GGG 0.444592 1:-91941389 MsG0180005443.01.T01:CDS
GTTGGTTTCCCAACATCATC+TGG 0.444751 1:+91942692 None:intergenic
TTGGCCTCAACTGTTCCTCT+TGG 0.447378 1:+91941331 None:intergenic
GACTACATGTGGCCCATATG+AGG 0.448512 1:+91938453 None:intergenic
TATTATTATTGAAGTTCTGT+TGG 0.451599 1:+91940975 None:intergenic
ATCGTCATTGGTCTCCATCA+AGG 0.466927 1:-91940399 MsG0180005443.01.T01:CDS
TTCTTCTAGTCTCTTCACTT+GGG 0.467384 1:+91940451 None:intergenic
GCTGTACGTAATCTCAAGAA+TGG 0.473934 1:-91938745 MsG0180005443.01.T01:CDS
AGAAGAAAAGATAGAGATGC+AGG 0.477881 1:-91940435 MsG0180005443.01.T01:CDS
AGAAGCAGAATTAAATGCTA+TGG 0.479810 1:-91939766 MsG0180005443.01.T01:CDS
TCAAATACAGGCTGGTCAAT+GGG 0.480928 1:-91941280 MsG0180005443.01.T01:CDS
CATCAAATGGCATCAGTCCT+GGG 0.483449 1:-91941402 MsG0180005443.01.T01:CDS
ATCAAAATCAGAAATGCATA+AGG 0.483727 1:-91939661 MsG0180005443.01.T01:intron
GAATGAAGTGGCGGTCCTAA+AGG 0.486341 1:-91938875 MsG0180005443.01.T01:CDS
ACAAAGGCACAGGGATGAAA+AGG 0.486938 1:-91939925 MsG0180005443.01.T01:CDS
ATTCTCAATCAAAGCATCAT+AGG 0.487620 1:+91938375 None:intergenic
TGATGCATCGGATCTACTCT+TGG 0.487712 1:+91941420 None:intergenic
TCTGAAATTTGCAGAGGTAG+AGG 0.487867 1:-91938791 MsG0180005443.01.T01:CDS
GTTACAAGCACTTCGGAAGC+AGG 0.487924 1:-91941098 MsG0180005443.01.T01:CDS
AGTTTAGGTGATTGGACAAA+CGG 0.490146 1:-91941241 MsG0180005443.01.T01:CDS
GTGAGATTGTTTCTCTGAAG+AGG 0.495168 1:-91941144 MsG0180005443.01.T01:CDS
AAATTAATTTGTGACAAAGT+CGG 0.499986 1:+91943176 None:intergenic
GAGAAAACTGCTGTTCAAGA+TGG 0.500999 1:-91942659 MsG0180005443.01.T01:CDS
TCTTCAAAATCTGGCTACTT+GGG 0.505506 1:-91942435 MsG0180005443.01.T01:CDS
TAAATTTGAAGATGAACTCC+AGG 0.505676 1:-91940324 MsG0180005443.01.T01:CDS
AAGAGACAATGAGGCTGCTA+AGG 0.508811 1:-91939697 MsG0180005443.01.T01:CDS
AGCAGCCTCATTGTCTCTTG+AGG 0.509235 1:+91939701 None:intergenic
TTGAAGATGCACAAAGGCAC+AGG 0.510046 1:-91939935 MsG0180005443.01.T01:CDS
ATTGTGTCTCGTCTTTCTCA+GGG 0.510679 1:+91940247 None:intergenic
CTTTGGTGCCAGATGATGTT+GGG 0.511310 1:-91942700 MsG0180005443.01.T01:CDS
ACACAGTTTGCAGAAAGAAC+AGG 0.512040 1:-91939847 MsG0180005443.01.T01:CDS
GTTGGTTAATGAGTTGAAGA+AGG 0.518971 1:+91943198 None:intergenic
TTTCTTCCATAAGCCTGTTG+TGG 0.519288 1:+91940099 None:intergenic
AGATCAACATGAATTGAAAG+TGG 0.519867 1:-91940039 MsG0180005443.01.T01:CDS
AGTAGATCCGATGCATCAAA+TGG 0.520711 1:-91941415 MsG0180005443.01.T01:CDS
CCCGAATTTGCAAATTTCAA+GGG 0.521489 1:+91942351 None:intergenic
CTGAAATTTGCAGAGGTAGA+GGG 0.524057 1:-91938790 MsG0180005443.01.T01:CDS
AGAAAGACAACAGCTTGTTA+TGG 0.526698 1:-91938767 MsG0180005443.01.T01:CDS
TAAATTTGGTTACACCATCC+TGG 0.527114 1:+91938634 None:intergenic
GGTACATTGTCAAGGTAACC+AGG 0.529091 1:-91938491 MsG0180005443.01.T01:three_prime_UTR
AAAGGAATTATTGAATGAAG+TGG 0.532662 1:-91938887 MsG0180005443.01.T01:CDS
AGAAATGCAATCAAGAGCTC+AGG 0.533105 1:-91940070 MsG0180005443.01.T01:CDS
AGTCTGATATTGATAATACT+AGG 0.533275 1:-91940919 MsG0180005443.01.T01:CDS
GGAGAAAGAACTGAGAGTAC+AGG 0.534432 1:-91940351 MsG0180005443.01.T01:CDS
CTGAAAACATGTTCAAGTCA+TGG 0.540034 1:-91943023 MsG0180005443.01.T01:exon
ATTGGAATTTCAAGCAACTC+AGG 0.543027 1:-91942968 MsG0180005443.01.T01:intron
AGAAAACTGCTGTTCAAGAT+GGG 0.543774 1:-91942658 MsG0180005443.01.T01:CDS
GATTGTTTCTCTGAAGAGGC+AGG 0.546222 1:-91941140 MsG0180005443.01.T01:CDS
GGCTCCTGTAATCTTTCTCT+CGG 0.547618 1:+91941202 None:intergenic
TTACAGGAGCCTTCAGGCAA+TGG 0.549125 1:-91941190 MsG0180005443.01.T01:CDS
GGAATGGATGCTGCAAGCAC+TGG 0.552828 1:-91939124 MsG0180005443.01.T01:CDS
CTCAAGAATAACAGAGGACG+AGG 0.553689 1:-91939735 MsG0180005443.01.T01:CDS
ACTGATGCCATTTGATGCAT+CGG 0.558366 1:+91941408 None:intergenic
ATGATGTTGTAGCCTCATAT+GGG 0.558962 1:-91938465 MsG0180005443.01.T01:three_prime_UTR
GTGGCATTGCCATTGCCTGA+AGG 0.565313 1:+91941181 None:intergenic
GTGCATAAGAGGTCAAATAC+AGG 0.566002 1:-91941292 MsG0180005443.01.T01:CDS
TAATTTGTGACAAAGTCGGT+TGG 0.574688 1:+91943180 None:intergenic
AATTTGCTGCGCTGACTGCA+CGG 0.575216 1:-91938534 MsG0180005443.01.T01:three_prime_UTR
TCATCCCATGAAGCTACCCC+AGG 0.575983 1:+91941385 None:intergenic
TATCTTATAGAATAGCAACT+TGG 0.578135 1:-91941443 MsG0180005443.01.T01:intron
TACCTTGACAATGTACCGTA+CGG 0.578896 1:+91938497 None:intergenic
CATGTTACAAAATGAACACT+CGG 0.582030 1:-91940504 MsG0180005443.01.T01:CDS
TCTTTGGTGCCAGATGATGT+TGG 0.584848 1:-91942701 MsG0180005443.01.T01:CDS
TATATCTCAATTAGAAGGAG+AGG 0.593443 1:-91939799 MsG0180005443.01.T01:CDS
CGCATCTGAGCAGCTTCAGG+AGG 0.596198 1:-91940216 MsG0180005443.01.T01:CDS
GATAAACATTTGACTACATG+TGG 0.600184 1:+91938442 None:intergenic
GTCCGTACGGTACATTGTCA+AGG 0.604440 1:-91938499 MsG0180005443.01.T01:three_prime_UTR
AACATATACAGGGGTTACAA+AGG 0.605528 1:-91938679 MsG0180005443.01.T01:three_prime_UTR
AAGTGGCGGTCCTAAAGGAA+AGG 0.605693 1:-91938870 MsG0180005443.01.T01:CDS
TCGAAGAAGCTGATGAATTG+CGG 0.607639 1:-91940124 MsG0180005443.01.T01:CDS
AGGCTACAACATCATACCCC+TGG 0.610084 1:+91938473 None:intergenic
TCTTCTTAAGAATGAAAATG+TGG 0.611817 1:-91940567 MsG0180005443.01.T01:CDS
GATTAGTCTGAAATTTGCAG+AGG 0.613349 1:-91938797 MsG0180005443.01.T01:CDS
TCAATGGGTTCAGCATCAGA+TGG 0.615920 1:-91941265 MsG0180005443.01.T01:CDS
TTTCATACCAAACATATACA+GGG 0.623324 1:-91938689 MsG0180005443.01.T01:three_prime_UTR
AAGACAAATCAACGGTCTCA+GGG 0.626387 1:-91941041 MsG0180005443.01.T01:CDS
ATAAGAGGTCAAATACAGGC+TGG 0.635907 1:-91941288 MsG0180005443.01.T01:CDS
AACTAGAGTTACAAGCACTT+CGG 0.636170 1:-91941105 MsG0180005443.01.T01:CDS
GGTTAATGAGTTGAAGAAGG+CGG 0.638967 1:+91943201 None:intergenic
ACTGGTATTAGCAAGTCTGA+AGG 0.642094 1:-91939106 MsG0180005443.01.T01:CDS
GTACATTGTCAAGGTAACCA+GGG 0.643181 1:-91938490 MsG0180005443.01.T01:three_prime_UTR
TATCATGATTACTACCAGGA+TGG 0.644495 1:-91938648 MsG0180005443.01.T01:three_prime_UTR
TGAAGATGCACAAAGGCACA+GGG 0.646468 1:-91939934 MsG0180005443.01.T01:CDS
CAGTTTGCAGAAAGAACAGG+TGG 0.646980 1:-91939844 MsG0180005443.01.T01:CDS
TGATGCTGAACGCCTTACAA+AGG 0.649461 1:-91938905 MsG0180005443.01.T01:CDS
GTATTAGCAAGTCTGAAGGA+AGG 0.654276 1:-91939102 MsG0180005443.01.T01:intron
AAGATATCATGATTACTACC+AGG 0.654676 1:-91938652 MsG0180005443.01.T01:three_prime_UTR
GGAATTATTGAATGAAGTGG+CGG 0.655168 1:-91938884 MsG0180005443.01.T01:CDS
CATGACCTCAAGAGACAATG+AGG 0.664100 1:-91939706 MsG0180005443.01.T01:CDS
ATCAAATGGCATCAGTCCTG+GGG 0.667145 1:-91941401 MsG0180005443.01.T01:CDS
CAGAACTCAATGCCACCAAG+AGG 0.670351 1:-91941346 MsG0180005443.01.T01:CDS
AAGAAGCTCAAGAATAACAG+AGG 0.670995 1:-91939741 MsG0180005443.01.T01:CDS
GCCACCAAGAGGAACAGTTG+AGG 0.674754 1:-91941335 MsG0180005443.01.T01:CDS
AAGAACTTGAAGATGCACAA+AGG 0.694127 1:-91939941 MsG0180005443.01.T01:CDS
TTCATACCAAACATATACAG+GGG 0.700618 1:-91938688 MsG0180005443.01.T01:three_prime_UTR
TACATTGTCAAGGTAACCAG+GGG 0.703545 1:-91938489 MsG0180005443.01.T01:three_prime_UTR
AATTTATCAAGACAAATCAA+CGG 0.718250 1:-91941049 MsG0180005443.01.T01:CDS
GAATTGTTATAAGCAACGTG+AGG 0.719572 1:-91940630 MsG0180005443.01.T01:CDS
GCTTATAAAAGAGCTCACAG+TGG 0.747992 1:-91940597 MsG0180005443.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATATAAATATTATATT+AGG - Chr1:91938903-91938922 MsG0180005443.01.T01:CDS 0.0%
!! ATCAACAAAATATATTATTA+TGG + Chr1:91946325-91946344 None:intergenic 10.0%
!! TTTATATATATATTTGAAGA+AGG + Chr1:91942145-91942164 None:intergenic 10.0%
!!! AAACTAACTTTTATTATTTT+TGG - Chr1:91946541-91946560 MsG0180005443.01.T01:intron 10.0%
!!! AAAGTTTAAATCTTTTTTTA+TGG - Chr1:91943015-91943034 MsG0180005443.01.T01:CDS 10.0%
!!! AAATAATAAAAGTTAGTTTT+TGG + Chr1:91946540-91946559 None:intergenic 10.0%
!!! AATAAATAAAGGTATAATAA+TGG - Chr1:91941955-91941974 MsG0180005443.01.T01:intron 10.0%
!!! GTAAATATAATTTTATTCAA+TGG + Chr1:91944008-91944027 None:intergenic 10.0%
!!! TACAATAACATTTTTTATTT+TGG - Chr1:91946062-91946081 MsG0180005443.01.T01:intron 10.0%
!!! TGATTATATATAATTGATTT+TGG + Chr1:91941542-91941561 None:intergenic 10.0%
!! ACATTCATATATTACTTTAT+CGG - Chr1:91941060-91941079 MsG0180005443.01.T01:CDS 15.0%
!! AGATGAAATTCAATAAATAA+GGG + Chr1:91939331-91939350 None:intergenic 15.0%
!! ATAAAGTAATATATGAATGT+AGG + Chr1:91941060-91941079 None:intergenic 15.0%
!! ATAAATATTATATTAGGATC+TGG - Chr1:91938909-91938928 MsG0180005443.01.T01:intron 15.0%
!! ATCAAATTACAAAAAAGAAA+AGG + Chr1:91940010-91940029 None:intergenic 15.0%
!! GCAAACTAATAAAAAAAAAA+TGG + Chr1:91942185-91942204 None:intergenic 15.0%
!! GGAAAAAAATAATCATAAAA+CGG + Chr1:91941170-91941189 None:intergenic 15.0%
!! GTTAAAAAAAGAAAAGAAAA+TGG - Chr1:91939659-91939678 MsG0180005443.01.T01:intron 15.0%
!! TAAATATTATATTAGGATCT+GGG - Chr1:91938910-91938929 MsG0180005443.01.T01:intron 15.0%
!! TAGATGAAATTCAATAAATA+AGG + Chr1:91939332-91939351 None:intergenic 15.0%
!! TCCAAAAAACAAAAAAAAAA+AGG + Chr1:91939710-91939729 None:intergenic 15.0%
!! TTAATATCTGATAATAAGTA+TGG + Chr1:91945865-91945884 None:intergenic 15.0%
!! TTAATTACCATTAATTATTC+AGG - Chr1:91938686-91938705 MsG0180005443.01.T01:three_prime_UTR 15.0%
!!! ATCAAATTTAGGTTAAATAA+AGG + Chr1:91941112-91941131 None:intergenic 15.0%
!!! ATGATTTGTAGTTTTTTTTA+GGG - Chr1:91941402-91941421 MsG0180005443.01.T01:CDS 15.0%
!!! TAACTTTATTGTTTTGAAAA+AGG + Chr1:91939643-91939662 None:intergenic 15.0%
!!! TATGATTTGTAGTTTTTTTT+AGG - Chr1:91941401-91941420 MsG0180005443.01.T01:CDS 15.0%
!!! TCATACATTTACTTTATTTT+TGG - Chr1:91941033-91941052 MsG0180005443.01.T01:CDS 15.0%
!!! TGATTTTGTAAAATTGATTA+TGG - Chr1:91943292-91943311 MsG0180005443.01.T01:five_prime_UTR 15.0%
!!! TTTTCTTTTTTGTAATTTGA+TGG - Chr1:91940009-91940028 MsG0180005443.01.T01:CDS 15.0%
!!! TTTTTCATTATACAACAATT+AGG + Chr1:91942607-91942626 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTGAAGGA+AGG - Chr1:91938331-91938350 MsG0180005443.01.T01:three_prime_UTR 15.0%
!! AAACAACTAATATTAAGAGA+CGG + Chr1:91941812-91941831 None:intergenic 20.0%
!! AAACATATATCTCAATTAGA+AGG - Chr1:91945682-91945701 MsG0180005443.01.T01:intron 20.0%
!! AAGATATATGTTGAAAAAGA+TGG - Chr1:91940316-91940335 MsG0180005443.01.T01:CDS 20.0%
!! AAGTACAAAAGAAAAAACAA+TGG - Chr1:91945489-91945508 MsG0180005443.01.T01:intron 20.0%
!! AATAATAATAAATGCTGCAT+TGG + Chr1:91939295-91939314 None:intergenic 20.0%
!! AATGAAAATAAGTATTCCAA+TGG + Chr1:91940517-91940536 None:intergenic 20.0%
!! AATTTATCAAGACAAATCAA+CGG - Chr1:91944437-91944456 MsG0180005443.01.T01:intron 20.0%
!! ACAAAAGAATAAGGAAATAT+TGG - Chr1:91944727-91944746 MsG0180005443.01.T01:intron 20.0%
!! ACATTATTGAGAGATAATAA+AGG - Chr1:91942008-91942027 MsG0180005443.01.T01:intron 20.0%
!! AGTTTAACAGATTCAAAAAT+TGG + Chr1:91942872-91942891 None:intergenic 20.0%
!! ATGAAAATAAGTATTCCAAT+GGG + Chr1:91940516-91940535 None:intergenic 20.0%
!! ATTATTATTGAAGTTCTGTT+GGG + Chr1:91944513-91944532 None:intergenic 20.0%
!! CATTCATATATTACTTTATC+GGG - Chr1:91941061-91941080 MsG0180005443.01.T01:CDS 20.0%
!! GGATGAAATTCAATAAATAA+AGG - Chr1:91941944-91941963 MsG0180005443.01.T01:intron 20.0%
!! TATATAATTTCAATACGTGA+CGG - Chr1:91940142-91940161 MsG0180005443.01.T01:CDS 20.0%
!! TATGAATGTAAATCAGATTT+AGG + Chr1:91941018-91941037 None:intergenic 20.0%
!! TATTATTATTGAAGTTCTGT+TGG + Chr1:91944514-91944533 None:intergenic 20.0%
!! TCTCTTAATATTAGTTGTTT+AGG - Chr1:91941812-91941831 MsG0180005443.01.T01:intron 20.0%
!! TCTTATAAGCTAAACATTAT+TGG + Chr1:91942384-91942403 None:intergenic 20.0%
!! TGTGAATGTAAATCAAATTT+AGG + Chr1:91941123-91941142 None:intergenic 20.0%
!! TTCAGCTAGATTAATAAATA+TGG + Chr1:91942448-91942467 None:intergenic 20.0%
!! TTTGTTTACTGTAATTAACA+TGG - Chr1:91940767-91940786 MsG0180005443.01.T01:CDS 20.0%
!!! AAATCAATTTTAAGTAACAC+AGG + Chr1:91943278-91943297 None:intergenic 20.0%
!!! AAATTAATTTGTGACAAAGT+CGG + Chr1:91942313-91942332 None:intergenic 20.0%
!!! AACGGTAATAATATTTTTCT+TGG - Chr1:91940697-91940716 MsG0180005443.01.T01:CDS 20.0%
!!! AATAAATAAGGGTATAGTAA+TGG + Chr1:91939320-91939339 None:intergenic 20.0%
!!! AATCAGATTTAGGTTAAATA+AGG + Chr1:91941008-91941027 None:intergenic 20.0%
!!! ATTGGAATACTTATTTTCAT+TGG - Chr1:91940516-91940535 MsG0180005443.01.T01:CDS 20.0%
!!! ATTGTTTTGTACTTAAAAGA+AGG - Chr1:91942979-91942998 MsG0180005443.01.T01:CDS 20.0%
!!! CTTATTTTCATTGGTAAATT+TGG - Chr1:91940525-91940544 MsG0180005443.01.T01:CDS 20.0%
!!! GCCTTTTTTTTTTTGTTTTT+TGG - Chr1:91939706-91939725 MsG0180005443.01.T01:CDS 20.0%
!!! TAATGGATATGGATTAATTA+AGG - Chr1:91938648-91938667 MsG0180005443.01.T01:three_prime_UTR 20.0%
!!! TGATTTTTGTAACATGAAAA+GGG - Chr1:91946341-91946360 MsG0180005443.01.T01:intron 20.0%
!!! TTGATTTTTGTAACATGAAA+AGG - Chr1:91946340-91946359 MsG0180005443.01.T01:intron 20.0%
!!! TTTTTTTATGGATTCTTGTA+GGG - Chr1:91943027-91943046 MsG0180005443.01.T01:exon 20.0%
! AAAAAGATGGCTGAATATAT+CGG - Chr1:91940329-91940348 MsG0180005443.01.T01:CDS 25.0%
! AAACGACTATTATTTAGAGA+CGG - Chr1:91939464-91939483 MsG0180005443.01.T01:intron 25.0%
! AAAGGAATTATTGAATGAAG+TGG - Chr1:91946599-91946618 MsG0180005443.01.T01:intron 25.0%
! AATAATATGAAATGCCTTGA+AGG - Chr1:91939733-91939752 MsG0180005443.01.T01:CDS 25.0%
! AATGCTAGAACAAAAGAATA+AGG - Chr1:91944718-91944737 MsG0180005443.01.T01:intron 25.0%
! AATTCTCTATTTCACTATTC+TGG + Chr1:91944841-91944860 None:intergenic 25.0%
! ACACTATCAAATCTGAAAAT+GGG - Chr1:91942575-91942594 MsG0180005443.01.T01:CDS 25.0%
! AGGTTTATGCATGATTATTA+AGG - Chr1:91941832-91941851 MsG0180005443.01.T01:intron 25.0%
! AGTAATAACCTTAGAATCTA+AGG - Chr1:91945999-91946018 MsG0180005443.01.T01:intron 25.0%
! AGTTAGTACTCACAATAAAA+AGG - Chr1:91945965-91945984 MsG0180005443.01.T01:intron 25.0%
! ATAATATGAAATGCCTTGAA+GGG - Chr1:91939734-91939753 MsG0180005443.01.T01:CDS 25.0%
! ATCAAAATCAGAAATGCATA+AGG - Chr1:91945825-91945844 MsG0180005443.01.T01:intron 25.0%
! ATGAAAAAAACATGTTTCCT+AGG - Chr1:91942619-91942638 MsG0180005443.01.T01:CDS 25.0%
! CAAAGGAAAAATTATTGCAA+TGG + Chr1:91943687-91943706 None:intergenic 25.0%
! CATCCATATAACAAAACATT+TGG - Chr1:91946475-91946494 MsG0180005443.01.T01:intron 25.0%
! CATTCAATAATTCCTTTGTA+AGG + Chr1:91946596-91946615 None:intergenic 25.0%
! CCACTAACTACAATTAATAA+GGG + Chr1:91939382-91939363 None:intergenic 25.0%
! CTATATGTGAATTGATTATG+CGG + Chr1:91941590-91941609 None:intergenic 25.0%
! GTTAAATTAACTGTAGGTTA+TGG + Chr1:91943665-91943684 None:intergenic 25.0%
! GTTTATATGGATCCAATTAA+TGG + Chr1:91939870-91939889 None:intergenic 25.0%
! GTTTATGAAAAAGAAATGAG+TGG - Chr1:91944620-91944639 MsG0180005443.01.T01:intron 25.0%
! TAAAAGAAGGATATGTTGAT+TGG - Chr1:91942992-91943011 MsG0180005443.01.T01:CDS 25.0%
! TACACTATCAAATCTGAAAA+TGG - Chr1:91942574-91942593 MsG0180005443.01.T01:CDS 25.0%
! TATCTTATAGAATAGCAACT+TGG - Chr1:91944043-91944062 MsG0180005443.01.T01:intron 25.0%
! TCAAATGAATAAATCCAAAC+AGG + Chr1:91943900-91943919 None:intergenic 25.0%
! TCCACTAACTACAATTAATA+AGG - Chr1:91939362-91939381 MsG0180005443.01.T01:intron 25.0%
! TCCACTAACTACAATTAATA+AGG + Chr1:91939381-91939362 None:intergenic 25.0%
! TCCTTATTAATTGTAGTTAG+TGG + Chr1:91939366-91939385 None:intergenic 25.0%
! TCGGAATTAAATTAACCTTT+CGG + Chr1:91938615-91938634 None:intergenic 25.0%
! TCTTCTTAAGAATGAAAATG+TGG - Chr1:91944919-91944938 MsG0180005443.01.T01:intron 25.0%
! TGAAAATAAGTATTCCAATG+GGG + Chr1:91940515-91940534 None:intergenic 25.0%
! TGAAAATCAAGTTAAGTCTT+TGG - Chr1:91945114-91945133 MsG0180005443.01.T01:intron 25.0%
! TGAAATGAGAATTCATTGAT+GGG + Chr1:91940649-91940668 None:intergenic 25.0%
! TGTGAATTACATATGTCAAA+TGG + Chr1:91941261-91941280 None:intergenic 25.0%
! TGTGGTGATAATATATAACA+AGG - Chr1:91946191-91946210 MsG0180005443.01.T01:intron 25.0%
! TTCGGTTAAAATAATGAAGT+CGG + Chr1:91938597-91938616 None:intergenic 25.0%
! TTGAAATGAGAATTCATTGA+TGG + Chr1:91940650-91940669 None:intergenic 25.0%
! TTTCATACCAAACATATACA+GGG - Chr1:91946797-91946816 MsG0180005443.01.T01:intron 25.0%
!! AAAAATGTTAGTTGATGTAC+AGG + Chr1:91946915-91946934 None:intergenic 25.0%
!! AATTTTATCTCCTTCAAAAG+TGG - Chr1:91943442-91943461 MsG0180005443.01.T01:intron 25.0%
!! ACACAGAATTAAATGTTTTG+CGG - Chr1:91944801-91944820 MsG0180005443.01.T01:intron 25.0%
!! AGTCTGATATTGATAATACT+AGG - Chr1:91944567-91944586 MsG0180005443.01.T01:intron 25.0%
!! TATCATCTGTTTGACATTTT+TGG - Chr1:91947063-91947082 MsG0180005443.01.T01:intron 25.0%
!! TCATTTTAAATGCTAGAACT+TGG - Chr1:91940572-91940591 MsG0180005443.01.T01:CDS 25.0%
!! TTCTAGCATTTAAAATGAGT+AGG + Chr1:91940570-91940589 None:intergenic 25.0%
!! TTGAATCTGTTAAACTTGTT+AGG - Chr1:91942876-91942895 MsG0180005443.01.T01:intron 25.0%
!!! AACATAGAATCCATTTTTCT+TGG - Chr1:91941765-91941784 MsG0180005443.01.T01:intron 25.0%
!!! AATCTCACTTTTGAGATTTT+CGG + Chr1:91944330-91944349 None:intergenic 25.0%
!!! AATCTTTTGAGATTTCCTAT+TGG + Chr1:91944762-91944781 None:intergenic 25.0%
!!! AATGCATTCTTTTTCATCTT+TGG + Chr1:91942758-91942777 None:intergenic 25.0%
!!! ACTTCATTATTTTAACCGAA+AGG - Chr1:91938597-91938616 MsG0180005443.01.T01:three_prime_UTR 25.0%
!!! ATTAGTTGTGTTGATTTTGA+TGG - Chr1:91941860-91941879 MsG0180005443.01.T01:intron 25.0%
!!! CAAAAAGTACTGGTTAAATT+TGG + Chr1:91946869-91946888 None:intergenic 25.0%
!!! CAAATGTTTTGTTATATGGA+TGG + Chr1:91946477-91946496 None:intergenic 25.0%
!!! CTTTTTTTATGGATTCTTGT+AGG - Chr1:91943026-91943045 MsG0180005443.01.T01:exon 25.0%
!!! GAAAAGTGTACATATCATTT+TGG + Chr1:91946035-91946054 None:intergenic 25.0%
!!! GTATGAATCTGATTTTGATT+AGG - Chr1:91942730-91942749 MsG0180005443.01.T01:CDS 25.0%
!!! GTTTGGCTTTATTTAACAAA+AGG + Chr1:91942115-91942134 None:intergenic 25.0%
!!! TATTGTTTTGAAAAAGGTGT+AGG + Chr1:91939637-91939656 None:intergenic 25.0%
!!! TGAATCTGTTAAACTTGTTA+GGG - Chr1:91942877-91942896 MsG0180005443.01.T01:intron 25.0%
!!! TGATTTTAACATCCAAACTT+GGG - Chr1:91940615-91940634 MsG0180005443.01.T01:CDS 25.0%
!!! TGGTTTTAATTACAGAGTAA+CGG - Chr1:91940679-91940698 MsG0180005443.01.T01:CDS 25.0%
!!! TGTTAATGAGTTTTATTCAG+TGG + Chr1:91938431-91938450 None:intergenic 25.0%
!!! TTGAAATGTCACTTTTGAAA+AGG - Chr1:91938832-91938851 MsG0180005443.01.T01:CDS 25.0%
AAATTCAACTGTAATGAGTG+AGG - Chr1:91946163-91946182 MsG0180005443.01.T01:intron 30.0%
AACTAATATTAAGAGACGGA+GGG + Chr1:91941808-91941827 None:intergenic 30.0%
AAGAAAGTAAGAGAGATAGA+GGG + Chr1:91943181-91943200 None:intergenic 30.0%
AAGAGACAATTATTGTGAGA+CGG + Chr1:91942052-91942033 None:intergenic 30.0%
AAGATATCATGATTACTACC+AGG - Chr1:91946834-91946853 MsG0180005443.01.T01:intron 30.0%
AAGGGACTTATTACCATAAA+AGG + Chr1:91939140-91939159 None:intergenic 30.0%
AATGTTGTCATATGGTATTG+TGG - Chr1:91941086-91941105 MsG0180005443.01.T01:CDS 30.0%
AATTCAACTGTAATGAGTGA+GGG - Chr1:91946164-91946183 MsG0180005443.01.T01:intron 30.0%
ACCAGAACTATACCATTAAT+TGG - Chr1:91939855-91939874 MsG0180005443.01.T01:CDS 30.0%
AGAAGCAGAATTAAATGCTA+TGG - Chr1:91945720-91945739 MsG0180005443.01.T01:intron 30.0%
AGATCAACATGAATTGAAAG+TGG - Chr1:91945447-91945466 MsG0180005443.01.T01:intron 30.0%
AGATTAGGAGATGAATAATG+TGG + Chr1:91943240-91943259 None:intergenic 30.0%
ATAAAACAGACTATGTAGTC+TGG - Chr1:91947153-91947172 MsG0180005443.01.T01:intron 30.0%
ATACACTAAGAATCAGTGTT+TGG - Chr1:91943473-91943492 MsG0180005443.01.T01:intron 30.0%
ATACACTATACACAAATGCT+TGG - Chr1:91940204-91940223 MsG0180005443.01.T01:CDS 30.0%
ATGTTGTTGTGGTATTTATG+AGG + Chr1:91941750-91941769 None:intergenic 30.0%
ATTCATGTTGAAGAATGAAG+AGG - Chr1:91939601-91939620 MsG0180005443.01.T01:intron 30.0%
CAATTCTTATGTGAGAAGTT+AGG + Chr1:91943584-91943603 None:intergenic 30.0%
CACTATCAAATCTGAAAATG+GGG - Chr1:91942576-91942595 MsG0180005443.01.T01:CDS 30.0%
CAGGCTTCTATCTATATTAA+TGG + Chr1:91939824-91939843 None:intergenic 30.0%
CATGTTACAAAATGAACACT+CGG - Chr1:91944982-91945001 MsG0180005443.01.T01:intron 30.0%
CATTCACACATTACTTTGTT+AGG - Chr1:91941135-91941154 MsG0180005443.01.T01:CDS 30.0%
CCATTAGTTAACTGCAAAAT+CGG + Chr1:91938634-91938653 None:intergenic 30.0%
CCCTTATTAATTGTAGTTAG+TGG - Chr1:91941909-91941928 MsG0180005443.01.T01:intron 30.0%
CTAAACAGAAACTTCTAACA+AGG - Chr1:91943962-91943981 MsG0180005443.01.T01:intron 30.0%
CTTAAGTAGTGCTAAAGATT+AGG + Chr1:91943255-91943274 None:intergenic 30.0%
GAGTTGTAAATGCAAAGATA+GGG + Chr1:91940366-91940385 None:intergenic 30.0%
GATAAACATTTGACTACATG+TGG + Chr1:91947047-91947066 None:intergenic 30.0%
GATCAAAGCTGTATTCAAAT+TGG - Chr1:91942500-91942519 MsG0180005443.01.T01:intron 30.0%
GATGAAAAAGAATGCATTGA+TGG - Chr1:91942760-91942779 MsG0180005443.01.T01:intron 30.0%
GATTAGGAGATGAATAATGT+GGG + Chr1:91943239-91943258 None:intergenic 30.0%
GCAATGGTTAAATTAACTGT+AGG + Chr1:91943671-91943690 None:intergenic 30.0%
GTGTAAATTTCAAACATCCT+AGG + Chr1:91942639-91942658 None:intergenic 30.0%
GTTACAATCTTGATGAAGTA+AGG - Chr1:91943832-91943851 MsG0180005443.01.T01:intron 30.0%
GTTTCATACCAAACATATAC+AGG - Chr1:91946796-91946815 MsG0180005443.01.T01:intron 30.0%
TAAATTTGAAGATGAACTCC+AGG - Chr1:91945162-91945181 MsG0180005443.01.T01:intron 30.0%
TAGTTAAGCATACCGAAAAA+GGG + Chr1:91939158-91939177 None:intergenic 30.0%
TATAATAGGGTCATGTTAAC+CGG + Chr1:91939197-91939216 None:intergenic 30.0%
TATATCTCAATTAGAAGGAG+AGG - Chr1:91945687-91945706 MsG0180005443.01.T01:intron 30.0%
TATTGGATCTATCTTCCAAT+AGG - Chr1:91944744-91944763 MsG0180005443.01.T01:intron 30.0%
TATTTATGAGGTTAGGGAAT+TGG + Chr1:91941738-91941757 None:intergenic 30.0%
TCAACATGAATTTCCTTACT+TGG + Chr1:91939592-91939611 None:intergenic 30.0%
TCCAATTAATGGTATAGTTC+TGG + Chr1:91939859-91939878 None:intergenic 30.0%
TCTATAGACACGAGTTTATA+TGG + Chr1:91939883-91939902 None:intergenic 30.0%
TCTATATAATTCCTTAACCC+CGG - Chr1:91939013-91939032 MsG0180005443.01.T01:intron 30.0%
TCTCAATCAACCAAGAAATA+AGG - Chr1:91942224-91942243 MsG0180005443.01.T01:intron 30.0%
TCTCATTTCAAGATAGATCT+TGG - Chr1:91940659-91940678 MsG0180005443.01.T01:CDS 30.0%
TGAAATAAATGCAACATGAC+TGG + Chr1:91942088-91942107 None:intergenic 30.0%
TGAGTTGTAAATGCAAAGAT+AGG + Chr1:91940367-91940386 None:intergenic 30.0%
TGATGCTTTGATTGAGAATT+TGG - Chr1:91947115-91947134 MsG0180005443.01.T01:intron 30.0%
TGCTGTGGAATTTATAATGA+TGG - Chr1:91943768-91943787 MsG0180005443.01.T01:intron 30.0%
TTACAGTTGCAACAATGAAA+TGG + Chr1:91942937-91942956 None:intergenic 30.0%
TTACATTTACGTATCTCATG+AGG + Chr1:91941220-91941239 None:intergenic 30.0%
TTCATACCAAACATATACAG+GGG - Chr1:91946798-91946817 MsG0180005443.01.T01:intron 30.0%
TTGGAGAATCTTCAGTTTAA+CGG + Chr1:91938556-91938575 None:intergenic 30.0%
TTGTGGTATTTATGAGGTTA+GGG + Chr1:91941744-91941763 None:intergenic 30.0%
TTGTTATATGGATGGTAAGA+GGG + Chr1:91946469-91946488 None:intergenic 30.0%
TTTGTAACATGAAAAGGGAA+TGG - Chr1:91946346-91946365 MsG0180005443.01.T01:intron 30.0%
! AAATGGATTCTATGTTGTTG+TGG + Chr1:91941761-91941780 None:intergenic 30.0%
! AAGGTGCAACATTTATGTTT+TGG - Chr1:91940427-91940446 MsG0180005443.01.T01:CDS 30.0%
! AGATGAATTTTCATCGTCAT+TGG - Chr1:91945075-91945094 MsG0180005443.01.T01:intron 30.0%
! AGTCGTTTAAGATTTATGCA+CGG + Chr1:91939452-91939471 None:intergenic 30.0%
! AGTTAGTGGAGTATTTAAGT+TGG - Chr1:91941923-91941942 MsG0180005443.01.T01:intron 30.0%
! AGTTGATGTACAGGATAAAT+AGG + Chr1:91946906-91946925 None:intergenic 30.0%
! ATGGTAATAAGTCCCTTTTT+CGG - Chr1:91939143-91939162 MsG0180005443.01.T01:intron 30.0%
! ATTCTCAATCAAAGCATCAT+AGG + Chr1:91947114-91947133 None:intergenic 30.0%
! CTCAAATTCTGAACTTCTTT+TGG - Chr1:91944676-91944695 MsG0180005443.01.T01:intron 30.0%
! GGAGATAAAATTGATTCTAG+AGG + Chr1:91943434-91943453 None:intergenic 30.0%
! TCTACCTTATTTGCAGAAAT+GGG - Chr1:91943734-91943753 MsG0180005443.01.T01:intron 30.0%
! TGGTCACTTATTCTTTTACT+TGG - Chr1:91940029-91940048 MsG0180005443.01.T01:CDS 30.0%
! TTGCAGTTAACTAATGGATA+TGG - Chr1:91938637-91938656 MsG0180005443.01.T01:three_prime_UTR 30.0%
! TTTGTTATATGGATGGTAAG+AGG + Chr1:91946470-91946489 None:intergenic 30.0%
!! CTGATTTTAACATCCAAACT+TGG - Chr1:91940614-91940633 MsG0180005443.01.T01:CDS 30.0%
!! CTTTGATAGTGATATATGTG+TGG - Chr1:91939782-91939801 MsG0180005443.01.T01:CDS 30.0%
!! GCACCAAATGTTTTGTTATA+TGG + Chr1:91946481-91946500 None:intergenic 30.0%
!! TGATTTTGATAGAACGGTTA+TGG + Chr1:91941621-91941640 None:intergenic 30.0%
!!! GTAGAGTTTTTAGTGCATTT+AGG + Chr1:91943719-91943738 None:intergenic 30.0%
!!! TAATGAGTTTTATTCAGTGG+CGG + Chr1:91938428-91938447 None:intergenic 30.0%
!!! TGCAACATTTATGTTTTGGT+AGG - Chr1:91940431-91940450 MsG0180005443.01.T01:CDS 30.0%
!!! TTGATTTTCAAGTTCCTTGA+TGG + Chr1:91945104-91945123 None:intergenic 30.0%
!!! TTTTTTCATTTTGCATAGCC+TGG + Chr1:91945183-91945202 None:intergenic 30.0%
AAAAAACTGAGCAGGAAGAA+CGG - Chr1:91945197-91945216 MsG0180005443.01.T01:intron 35.0%
AAAGGAAAGGAACACGAATA+TGG - Chr1:91946629-91946648 MsG0180005443.01.T01:intron 35.0%
AAATCATTGATCGCCAAACA+TGG + Chr1:91938814-91938833 None:intergenic 35.0%
AACATATACAGGGGTTACAA+AGG - Chr1:91946807-91946826 MsG0180005443.01.T01:intron 35.0%
AACTAGAGTTACAAGCACTT+CGG - Chr1:91944381-91944400 MsG0180005443.01.T01:intron 35.0%
AAGAACTTGAAGATGCACAA+AGG - Chr1:91945545-91945564 MsG0180005443.01.T01:intron 35.0%
AAGAAGCTCAAGAATAACAG+AGG - Chr1:91945745-91945764 MsG0180005443.01.T01:intron 35.0%
AAGAATCAGTGTTTGGACAT+TGG - Chr1:91943480-91943499 MsG0180005443.01.T01:intron 35.0%
AATGCATAAGGTAATTGCTC+AGG - Chr1:91945837-91945856 MsG0180005443.01.T01:intron 35.0%
AATTCTATTAAGCGCCTGTT+TGG - Chr1:91943883-91943902 MsG0180005443.01.T01:intron 35.0%
ACAGGTAACTATTCAGAATG+TGG - Chr1:91943609-91943628 MsG0180005443.01.T01:intron 35.0%
ACGGAGGGAGTAATATAATA+GGG + Chr1:91939210-91939229 None:intergenic 35.0%
ACTATACATACACATGCTTG+AGG - Chr1:91939930-91939949 MsG0180005443.01.T01:CDS 35.0%
ACTGAACTCCTTAGATTCTA+AGG + Chr1:91946010-91946029 None:intergenic 35.0%
ACTGATTAAGGATGCGAAAA+AGG - Chr1:91939049-91939068 MsG0180005443.01.T01:intron 35.0%
ACTTATTGACGTCGCATATT+AGG - Chr1:91945891-91945910 MsG0180005443.01.T01:intron 35.0%
AGAAAACTGCTGTTCAAGAT+GGG - Chr1:91942828-91942847 MsG0180005443.01.T01:intron 35.0%
AGAAGAAAAGATAGAGATGC+AGG - Chr1:91945051-91945070 MsG0180005443.01.T01:intron 35.0%
AGACAATTATTGTGAGACAG+AGG - Chr1:91942036-91942055 MsG0180005443.01.T01:intron 35.0%
AGGGTTCATGATTGTGTTAA+AGG + Chr1:91946450-91946469 None:intergenic 35.0%
AGGTAGAAAAAGAAAGCAGT+CGG - Chr1:91944408-91944427 MsG0180005443.01.T01:intron 35.0%
AGTTTAGGTGATTGGACAAA+CGG - Chr1:91944245-91944264 MsG0180005443.01.T01:intron 35.0%
ATAACACAAATACGACGTTG+TGG + Chr1:91946503-91946522 None:intergenic 35.0%
ATAGTAGCCGTCAAACATAA+CGG - Chr1:91938527-91938546 MsG0180005443.01.T01:three_prime_UTR 35.0%
ATCGGGTTAATGTTGTCATA+TGG - Chr1:91941078-91941097 MsG0180005443.01.T01:CDS 35.0%
ATGATGTTGTAGCCTCATAT+GGG - Chr1:91947021-91947040 MsG0180005443.01.T01:intron 35.0%
ATTGGAATTTCAAGCAACTC+AGG - Chr1:91942518-91942537 MsG0180005443.01.T01:intron 35.0%
ATTTACGTATCTCATGAGGA+TGG + Chr1:91941216-91941235 None:intergenic 35.0%
CAACTAATATTAAGAGACGG+AGG + Chr1:91941809-91941828 None:intergenic 35.0%
CAAGAAAGTAAGAGAGATAG+AGG + Chr1:91943182-91943201 None:intergenic 35.0%
CACAAAATCAAGTGCATAAG+AGG - Chr1:91944183-91944202 MsG0180005443.01.T01:intron 35.0%
CACATAAGAATTGTCGAAAC+AGG - Chr1:91943591-91943610 MsG0180005443.01.T01:intron 35.0%
CATTTAGGAGAGAAAGTCAA+AGG + Chr1:91943704-91943723 None:intergenic 35.0%
CCCGAATTTGCAAATTTCAA+GGG + Chr1:91943138-91943157 None:intergenic 35.0%
CCCTTGAAATTTGCAAATTC+GGG - Chr1:91943135-91943154 MsG0180005443.01.T01:five_prime_UTR 35.0%
CTAGTTAAGCATACCGAAAA+AGG + Chr1:91939159-91939178 None:intergenic 35.0%
CTGAAAACATGTTCAAGTCA+TGG - Chr1:91942463-91942482 MsG0180005443.01.T01:intron 35.0%
CTGTAACTATGTAAGCAAGT+GGG + Chr1:91939965-91939984 None:intergenic 35.0%
CTGTAATTAACATGGATCCA+CGG - Chr1:91940775-91940794 MsG0180005443.01.T01:CDS 35.0%
CTTGTTAGGGATTCAAAATC+AGG - Chr1:91942890-91942909 MsG0180005443.01.T01:intron 35.0%
GAAAATTGTGCTTGGACTAA+TGG + Chr1:91938738-91938757 None:intergenic 35.0%
GAATTGTTATAAGCAACGTG+AGG - Chr1:91944856-91944875 MsG0180005443.01.T01:intron 35.0%
GACAATTATTGTGAGACAGA+GGG - Chr1:91942037-91942056 MsG0180005443.01.T01:intron 35.0%
GACACTGCCTGAATAATTAA+TGG + Chr1:91938696-91938715 None:intergenic 35.0%
GATTGTGTTAAAGGGAACAA+GGG + Chr1:91946441-91946460 None:intergenic 35.0%
GCAAAATGAAAAAACTGAGC+AGG - Chr1:91945189-91945208 MsG0180005443.01.T01:intron 35.0%
GCATATTAGGACAGGTTAAA+TGG - Chr1:91945904-91945923 MsG0180005443.01.T01:intron 35.0%
GCCCTTGAAATTTGCAAATT+CGG - Chr1:91943134-91943153 MsG0180005443.01.T01:five_prime_UTR 35.0%
GCTTCAGTTAGATGCAATAA+AGG - Chr1:91944589-91944608 MsG0180005443.01.T01:intron 35.0%
GGAAACTGAACTGAAAGAAA+TGG - Chr1:91946650-91946669 MsG0180005443.01.T01:intron 35.0%
GGAATTATTGAATGAAGTGG+CGG - Chr1:91946602-91946621 MsG0180005443.01.T01:intron 35.0%
GGGTTCATGATTGTGTTAAA+GGG + Chr1:91946449-91946468 None:intergenic 35.0%
GTAACTATTCAGAATGTGGA+AGG - Chr1:91943613-91943632 MsG0180005443.01.T01:intron 35.0%
GTTGTGGTATTTATGAGGTT+AGG + Chr1:91941745-91941764 None:intergenic 35.0%
TAAATTTGGTTACACCATCC+TGG + Chr1:91946855-91946874 None:intergenic 35.0%
TAAGTTTGTACAACCCTTCA+AGG + Chr1:91939750-91939769 None:intergenic 35.0%
TATCATGATTACTACCAGGA+TGG - Chr1:91946838-91946857 MsG0180005443.01.T01:intron 35.0%
TATGATGTTGTAGCCTCATA+TGG - Chr1:91947020-91947039 MsG0180005443.01.T01:intron 35.0%
TATGCTTAACTAGTACATCC+CGG - Chr1:91939166-91939185 MsG0180005443.01.T01:intron 35.0%
TATGGTTCATCTTCACCTTT+CGG + Chr1:91943647-91943666 None:intergenic 35.0%
TATGTGAATTGATTATGCGG+TGG + Chr1:91941587-91941606 None:intergenic 35.0%
TATTCGTGTTCCTTTCCTTT+AGG + Chr1:91946629-91946648 None:intergenic 35.0%
TCCAATGGGGTAAGTAAAAA+GGG + Chr1:91940502-91940521 None:intergenic 35.0%
TCTTCAAAATCTGGCTACTT+GGG - Chr1:91943051-91943070 MsG0180005443.01.T01:five_prime_UTR 35.0%
TGATATATGTGTGGAGTGAT+GGG - Chr1:91939791-91939810 MsG0180005443.01.T01:CDS 35.0%
TGATTGTGTTAAAGGGAACA+AGG + Chr1:91946442-91946461 None:intergenic 35.0%
TGTAAATGCAAAGATAGGGT+TGG + Chr1:91940362-91940381 None:intergenic 35.0%
TGTAATTAACATGGATCCAC+GGG - Chr1:91940776-91940795 MsG0180005443.01.T01:CDS 35.0%
TGTGTTTCATTTCATTGTGC+TGG + Chr1:91945624-91945643 None:intergenic 35.0%
TTCCAATGGGGTAAGTAAAA+AGG + Chr1:91940503-91940522 None:intergenic 35.0%
TTCTCCTTTGCTAAGACTTT+CGG + Chr1:91939511-91939530 None:intergenic 35.0%
TTCTTCAAAATCTGGCTACT+TGG - Chr1:91943050-91943069 MsG0180005443.01.T01:five_prime_UTR 35.0%
TTCTTCTAGTCTCTTCACTT+GGG + Chr1:91945038-91945057 None:intergenic 35.0%
TTGAAACACCAATTGAGCTA+TGG - Chr1:91943795-91943814 MsG0180005443.01.T01:intron 35.0%
TTGAAGAAGGTTCTCAAGTT+TGG + Chr1:91942132-91942151 None:intergenic 35.0%
TTGTAACCCCTGTATATGTT+TGG + Chr1:91946807-91946826 None:intergenic 35.0%
TTGTAGGGTTCTTCAAAATC+TGG - Chr1:91943042-91943061 MsG0180005443.01.T01:five_prime_UTR 35.0%
TTTAGCATGGCCAAGAAAAA+TGG + Chr1:91941778-91941797 None:intergenic 35.0%
TTTCTTCTAGTCTCTTCACT+TGG + Chr1:91945039-91945058 None:intergenic 35.0%
TTTGGACAGTTAACCAAGTA+AGG - Chr1:91939576-91939595 MsG0180005443.01.T01:intron 35.0%
TTTGTTCTAGCATTGCTTCA+AGG + Chr1:91944712-91944731 None:intergenic 35.0%
! AAGTCACACTCCTTATTTCT+TGG + Chr1:91942237-91942256 None:intergenic 35.0%
! AGCAGAAATGCAAAAAGTAC+TGG + Chr1:91946879-91946898 None:intergenic 35.0%
! AGTTCTGTCTGAAGCTATAA+GGG + Chr1:91944127-91944146 None:intergenic 35.0%
! ATCAGACTTCAAGCTTTTAG+AGG + Chr1:91944555-91944574 None:intergenic 35.0%
! CACTTGATTTTGTGTTGCAT+TGG + Chr1:91944177-91944196 None:intergenic 35.0%
! CCGATTTTGCAGTTAACTAA+TGG - Chr1:91938631-91938650 MsG0180005443.01.T01:three_prime_UTR 35.0%
! CTACCTTATTTGCAGAAATG+GGG - Chr1:91943735-91943754 MsG0180005443.01.T01:intron 35.0%
! CTCTACCTTATTTGCAGAAA+TGG - Chr1:91943733-91943752 MsG0180005443.01.T01:intron 35.0%
! GAATGCATTGATGGTATCTT+TGG - Chr1:91942769-91942788 MsG0180005443.01.T01:intron 35.0%
! GTCAAAGTAGCTTCCTTTTA+TGG - Chr1:91939124-91939143 MsG0180005443.01.T01:CDS 35.0%
! GTTGGTTAATGAGTTGAAGA+AGG + Chr1:91942291-91942310 None:intergenic 35.0%
! TAATTTGTGACAAAGTCGGT+TGG + Chr1:91942309-91942328 None:intergenic 35.0%
! TAATTTTTCCACGCCATGTT+TGG - Chr1:91938798-91938817 MsG0180005443.01.T01:CDS 35.0%
! TCAAGATGGGACTTGTTTAT+GGG - Chr1:91942841-91942860 MsG0180005443.01.T01:intron 35.0%
! TTCAAGATGGGACTTGTTTA+TGG - Chr1:91942840-91942859 MsG0180005443.01.T01:intron 35.0%
! TTTTCCGAGAGAAAGATTAC+AGG - Chr1:91944280-91944299 MsG0180005443.01.T01:intron 35.0%
!! AAATGGATGTGTTGACTATG+TGG + Chr1:91941244-91941263 None:intergenic 35.0%
!! AACAGTTTTGTAGTGAGTGA+GGG - Chr1:91946104-91946123 MsG0180005443.01.T01:intron 35.0%
!! ACGGTGTGATTTTGATAGAA+CGG + Chr1:91941627-91941646 None:intergenic 35.0%
!! AGAAAGACAACAGCTTGTTA+TGG - Chr1:91946719-91946738 MsG0180005443.01.T01:intron 35.0%
!! ATGTGAAGTTCCACTTTTGA+AGG + Chr1:91943455-91943474 None:intergenic 35.0%
!! GATTAGTCTGAAATTTGCAG+AGG - Chr1:91946689-91946708 MsG0180005443.01.T01:intron 35.0%
!! GTTTTCTCTAGTTTCACTGT+TGG + Chr1:91942815-91942834 None:intergenic 35.0%
!! GTTTTTCTAGCGCATTCAAT+TGG + Chr1:91938575-91938594 None:intergenic 35.0%
AAAAACTGAGCAGGAAGAAC+GGG - Chr1:91945198-91945217 MsG0180005443.01.T01:intron 40.0%
AACAATGTCCATGTGCTTCT+GGG + Chr1:91940477-91940496 None:intergenic 40.0%
AAGACAAATCAACGGTCTCA+GGG - Chr1:91944445-91944464 MsG0180005443.01.T01:intron 40.0%
AAGACCGAAAGTCTTAGCAA+AGG - Chr1:91939504-91939523 MsG0180005443.01.T01:intron 40.0%
AAGATGGCTGAATATATCGG+TGG - Chr1:91940332-91940351 MsG0180005443.01.T01:CDS 40.0%
AAGGGCAGAGAAACAGTAAT+TGG + Chr1:91943120-91943139 None:intergenic 40.0%
AATCAGTGTTTGGACATTGG+TGG - Chr1:91943483-91943502 MsG0180005443.01.T01:intron 40.0%
AATGGATATGGACGAGCAAA+AGG + Chr1:91938720-91938739 None:intergenic 40.0%
ACACAGTTTGCAGAAAGAAC+AGG - Chr1:91945639-91945658 MsG0180005443.01.T01:intron 40.0%
ACTGGTATTAGCAAGTCTGA+AGG - Chr1:91946380-91946399 MsG0180005443.01.T01:intron 40.0%
AGAAATGCAATCAAGAGCTC+AGG - Chr1:91945416-91945435 MsG0180005443.01.T01:intron 40.0%
AGACAATTATTGTGAGACGG+AGG + Chr1:91939226-91939245 None:intergenic 40.0%
AGATGGCTGAATATATCGGT+GGG - Chr1:91940333-91940352 MsG0180005443.01.T01:CDS 40.0%
AGCCAGGAATATATAGAGTC+TGG + Chr1:91938405-91938424 None:intergenic 40.0%
AGTAGATCCGATGCATCAAA+TGG - Chr1:91944071-91944090 MsG0180005443.01.T01:intron 40.0%
ATAAGAGGTCAAATACAGGC+TGG - Chr1:91944198-91944217 MsG0180005443.01.T01:intron 40.0%
ATCAGTGTTTGGACATTGGT+GGG - Chr1:91943484-91943503 MsG0180005443.01.T01:intron 40.0%
ATCTTGATCCAACAAGAGGT+CGG + Chr1:91941192-91941211 None:intergenic 40.0%
ATTGTGTCTCGTCTTTCTCA+GGG + Chr1:91945242-91945261 None:intergenic 40.0%
CAGATGGAAGTTTAGGTGAT+TGG - Chr1:91944237-91944256 MsG0180005443.01.T01:intron 40.0%
CCACTTGCTTACATAGTTAC+AGG - Chr1:91939963-91939982 MsG0180005443.01.T01:CDS 40.0%
CCTGTAACTATGTAAGCAAG+TGG + Chr1:91939966-91939985 None:intergenic 40.0%
CGACTATTATTTAGAGACGG+AGG - Chr1:91939467-91939486 MsG0180005443.01.T01:intron 40.0%
CTCATAGTATATTGATCCCG+TGG + Chr1:91940795-91940814 None:intergenic 40.0%
CTGAAATTTGCAGAGGTAGA+GGG - Chr1:91946696-91946715 MsG0180005443.01.T01:intron 40.0%
CTTCCCCATTTCTGCAAATA+AGG + Chr1:91943741-91943760 None:intergenic 40.0%
GAAGAACTAGAACTCTTTGC+AGG - Chr1:91946767-91946786 MsG0180005443.01.T01:intron 40.0%
GACAATTATTGTGAGACGGA+GGG + Chr1:91939225-91939244 None:intergenic 40.0%
GACGGAGGGAGTAATATAAT+AGG + Chr1:91939211-91939230 None:intergenic 40.0%
GAGAAAACTGCTGTTCAAGA+TGG - Chr1:91942827-91942846 MsG0180005443.01.T01:intron 40.0%
GCCAGGAATATATAGAGTCT+GGG + Chr1:91938404-91938423 None:intergenic 40.0%
GCCCGAATTTGCAAATTTCA+AGG + Chr1:91943139-91943158 None:intergenic 40.0%
GCTGTACGTAATCTCAAGAA+TGG - Chr1:91946741-91946760 MsG0180005443.01.T01:intron 40.0%
GCTTATAAAAGAGCTCACAG+TGG - Chr1:91944889-91944908 MsG0180005443.01.T01:intron 40.0%
GGAGAAAAAGTGAGATGCTT+TGG - Chr1:91939558-91939577 MsG0180005443.01.T01:intron 40.0%
GGCGTGGAAAAATTATTAGC+CGG + Chr1:91938793-91938812 None:intergenic 40.0%
GGGTTAACGTTAGAATCTCA+TGG - Chr1:91946124-91946143 MsG0180005443.01.T01:intron 40.0%
GGTAGAAAAAGAAAGCAGTC+GGG - Chr1:91944409-91944428 MsG0180005443.01.T01:intron 40.0%
GTAATGAGTGAGGGTTAATG+TGG - Chr1:91946173-91946192 MsG0180005443.01.T01:intron 40.0%
GTACATTGTCAAGGTAACCA+GGG - Chr1:91946996-91947015 MsG0180005443.01.T01:intron 40.0%
GTAGAAAAAGAAAGCAGTCG+GGG - Chr1:91944410-91944429 MsG0180005443.01.T01:intron 40.0%
GTATTAGCAAGTCTGAAGGA+AGG - Chr1:91946384-91946403 MsG0180005443.01.T01:intron 40.0%
GTGATATATGTGTGGAGTGA+TGG - Chr1:91939790-91939809 MsG0180005443.01.T01:CDS 40.0%
GTGCATAAGAGGTCAAATAC+AGG - Chr1:91944194-91944213 MsG0180005443.01.T01:intron 40.0%
GTTTGACGGCTACTATCATA+TGG + Chr1:91938523-91938542 None:intergenic 40.0%
TAACAATGTCCATGTGCTTC+TGG + Chr1:91940478-91940497 None:intergenic 40.0%
TACATTGTCAAGGTAACCAG+GGG - Chr1:91946997-91947016 MsG0180005443.01.T01:intron 40.0%
TACCTTGACAATGTACCGTA+CGG + Chr1:91946992-91947011 None:intergenic 40.0%
TAGCTTTCACTGTGGTAGTA+GGG - Chr1:91939537-91939556 MsG0180005443.01.T01:intron 40.0%
TAGTAGCCGTCAAACATAAC+GGG - Chr1:91938528-91938547 MsG0180005443.01.T01:three_prime_UTR 40.0%
TAGTCCAAGCAGATAACTAC+CGG - Chr1:91938771-91938790 MsG0180005443.01.T01:CDS 40.0%
TATTGTGTCTCGTCTTTCTC+AGG + Chr1:91945243-91945262 None:intergenic 40.0%
TCAGCATCACTGTCAGAATT+AGG + Chr1:91946570-91946589 None:intergenic 40.0%
TCAGCATCAGATGGAAGTTT+AGG - Chr1:91944230-91944249 MsG0180005443.01.T01:intron 40.0%
TCGAAGAAGCTGATGAATTG+CGG - Chr1:91945362-91945381 MsG0180005443.01.T01:intron 40.0%
TGAGCTCTTGATTGCATTTC+TGG + Chr1:91945417-91945436 None:intergenic 40.0%
TGCAGAAATGGGGAAGATAA+TGG - Chr1:91943745-91943764 MsG0180005443.01.T01:intron 40.0%
TGGAATCTTGATCCAACAAG+AGG + Chr1:91941196-91941215 None:intergenic 40.0%
TTATGAGGTTAGGGAATTGG+TGG + Chr1:91941735-91941754 None:intergenic 40.0%
TTTCTTCCATAAGCCTGTTG+TGG + Chr1:91945390-91945409 None:intergenic 40.0%
! ACTGATGCCATTTGATGCAT+CGG + Chr1:91944081-91944100 None:intergenic 40.0%
! AGTCCAAGCACAATTTTCTC+TGG - Chr1:91938740-91938759 MsG0180005443.01.T01:CDS 40.0%
! GAGTTCTGTCTGAAGCTATA+AGG + Chr1:91944128-91944147 None:intergenic 40.0%
! GGTTAATGAGTTGAAGAAGG+CGG + Chr1:91942288-91942307 None:intergenic 40.0%
! GTGAGATTGTTTCTCTGAAG+AGG - Chr1:91944342-91944361 MsG0180005443.01.T01:intron 40.0%
! TCAAATACAGGCTGGTCAAT+GGG - Chr1:91944206-91944225 MsG0180005443.01.T01:intron 40.0%
! TCCCTTTTTACTTACCCCAT+TGG - Chr1:91940498-91940517 MsG0180005443.01.T01:CDS 40.0%
! TCTGAAATTTGCAGAGGTAG+AGG - Chr1:91946695-91946714 MsG0180005443.01.T01:intron 40.0%
! TGTGCTTGGACTAATGGATA+TGG + Chr1:91938732-91938751 None:intergenic 40.0%
!! CTTCAAGCTTTTAGAGGTCT+TGG + Chr1:91944549-91944568 None:intergenic 40.0%
!! GAACAGTTTTGTAGTGAGTG+AGG - Chr1:91946103-91946122 MsG0180005443.01.T01:intron 40.0%
!!! AGGGAGTGATTTCTAGCTTT+TGG - Chr1:91941421-91941440 MsG0180005443.01.T01:CDS 40.0%
!!! CTCACTTTTGAGATTTTCGG+TGG + Chr1:91944327-91944346 None:intergenic 40.0%
!!! TTTTTTTCCCGACCTCTTGT+TGG - Chr1:91941181-91941200 MsG0180005443.01.T01:CDS 40.0%
AAGAGACAATGAGGCTGCTA+AGG - Chr1:91945789-91945808 MsG0180005443.01.T01:intron 45.0%
AAGAGCTGTAGCTTTCACTG+TGG - Chr1:91939529-91939548 MsG0180005443.01.T01:intron 45.0%
AAGGGAACAAGGGATTCAGA+TGG + Chr1:91946431-91946450 None:intergenic 45.0%
ATCAAATGGCATCAGTCCTG+GGG - Chr1:91944085-91944104 MsG0180005443.01.T01:intron 45.0%
ATGAATTGCGGAACCACAAC+AGG - Chr1:91945374-91945393 MsG0180005443.01.T01:intron 45.0%
ATGGCTGAATATATCGGTGG+GGG - Chr1:91940335-91940354 MsG0180005443.01.T01:CDS 45.0%
ATGTAAGCAAGTGGGTAGAG+TGG + Chr1:91939957-91939976 None:intergenic 45.0%
CAAGACAAATCAACGGTCTC+AGG - Chr1:91944444-91944463 MsG0180005443.01.T01:intron 45.0%
CAGTTTGCAGAAAGAACAGG+TGG - Chr1:91945642-91945661 MsG0180005443.01.T01:intron 45.0%
CATCAAATGGCATCAGTCCT+GGG - Chr1:91944084-91944103 MsG0180005443.01.T01:intron 45.0%
CATCACGATGACTTGATGTG+TGG - Chr1:91940065-91940084 MsG0180005443.01.T01:CDS 45.0%
CATGACCTCAAGAGACAATG+AGG - Chr1:91945780-91945799 MsG0180005443.01.T01:intron 45.0%
CCACCAGAGAAAATTGTGCT+TGG + Chr1:91938746-91938765 None:intergenic 45.0%
CTCAAGAATAACAGAGGACG+AGG - Chr1:91945751-91945770 MsG0180005443.01.T01:intron 45.0%
CTCATTGTCTCTTGAGGTCA+TGG + Chr1:91945782-91945801 None:intergenic 45.0%
CTGTACTGCCATAGCTCAAT+TGG + Chr1:91943806-91943825 None:intergenic 45.0%
GAAAGATTACAGGAGCCTTC+AGG - Chr1:91944290-91944309 MsG0180005443.01.T01:intron 45.0%
GAAGAGGCAGGCAGAATTAT+CGG - Chr1:91944358-91944377 MsG0180005443.01.T01:intron 45.0%
GATGGCTGAATATATCGGTG+GGG - Chr1:91940334-91940353 MsG0180005443.01.T01:CDS 45.0%
GCCCAGACTCTATATATTCC+TGG - Chr1:91938400-91938419 MsG0180005443.01.T01:three_prime_UTR 45.0%
GGAGATGAATAATGTGGGTG+TGG + Chr1:91943234-91943253 None:intergenic 45.0%
GGCTCCTGTAATCTTTCTCT+CGG + Chr1:91944287-91944306 None:intergenic 45.0%
GGTACATTGTCAAGGTAACC+AGG - Chr1:91946995-91947014 MsG0180005443.01.T01:intron 45.0%
GTAGCTTTCACTGTGGTAGT+AGG - Chr1:91939536-91939555 MsG0180005443.01.T01:intron 45.0%
TACCGTACGGACCGAAAAAT+TGG + Chr1:91946979-91946998 None:intergenic 45.0%
TCATGTCCTTTGCAGCAGAA+AGG - Chr1:91940408-91940427 MsG0180005443.01.T01:CDS 45.0%
TCTTGATCCAACAAGAGGTC+GGG + Chr1:91941191-91941210 None:intergenic 45.0%
TGATGCATCGGATCTACTCT+TGG + Chr1:91944069-91944088 None:intergenic 45.0%
TGATGCTGAACGCCTTACAA+AGG - Chr1:91946581-91946600 MsG0180005443.01.T01:intron 45.0%
TGGAAGGATATACTGCCGAA+AGG - Chr1:91943629-91943648 MsG0180005443.01.T01:intron 45.0%
TGGGAATAGCAACCCAAGTT+TGG + Chr1:91940630-91940649 None:intergenic 45.0%
TGGGTGTGGTTGTTGAGAAT+TGG + Chr1:91943220-91943239 None:intergenic 45.0%
TTAGCCGGTAGTTATCTGCT+TGG + Chr1:91938778-91938797 None:intergenic 45.0%
TTGACGTCGCATATTAGGAC+AGG - Chr1:91945896-91945915 MsG0180005443.01.T01:intron 45.0%
! AAAGACAACCCAGAAGCACA+TGG - Chr1:91940466-91940485 MsG0180005443.01.T01:CDS 45.0%
! ACAAAGGCACAGGGATGAAA+AGG - Chr1:91945561-91945580 MsG0180005443.01.T01:intron 45.0%
! ATCGTCATTGGTCTCCATCA+AGG - Chr1:91945087-91945106 MsG0180005443.01.T01:intron 45.0%
! CCAAGCACAATTTTCTCTGG+TGG - Chr1:91938743-91938762 MsG0180005443.01.T01:CDS 45.0%
! GACTGCACGGTCCAATTTTT+CGG - Chr1:91946965-91946984 MsG0180005443.01.T01:intron 45.0%
! GATTGTTTCTCTGAAGAGGC+AGG - Chr1:91944346-91944365 MsG0180005443.01.T01:intron 45.0%
! GGAGAAAGAACTGAGAGTAC+AGG - Chr1:91945135-91945154 MsG0180005443.01.T01:intron 45.0%
! GTCAAATACAGGCTGGTCAA+TGG - Chr1:91944205-91944224 MsG0180005443.01.T01:intron 45.0%
! GTTGGTTTCCCAACATCATC+TGG + Chr1:91942797-91942816 None:intergenic 45.0%
! TCAATGGGTTCAGCATCAGA+TGG - Chr1:91944221-91944240 MsG0180005443.01.T01:intron 45.0%
! TGAAGATGCACAAAGGCACA+GGG - Chr1:91945552-91945571 MsG0180005443.01.T01:intron 45.0%
! TTGAAGATGCACAAAGGCAC+AGG - Chr1:91945551-91945570 MsG0180005443.01.T01:intron 45.0%
!! AATACGTGACGGATCTGCTT+AGG - Chr1:91940153-91940172 MsG0180005443.01.T01:CDS 45.0%
!! ATATGTGTGGAGTGATGGGT+TGG - Chr1:91939795-91939814 MsG0180005443.01.T01:CDS 45.0%
!! CTTTGGTGCCAGATGATGTT+GGG - Chr1:91942786-91942805 MsG0180005443.01.T01:intron 45.0%
!! GTCCAATTTTTCGGTCCGTA+CGG - Chr1:91946974-91946993 MsG0180005443.01.T01:intron 45.0%
!! TCTTTGGTGCCAGATGATGT+TGG - Chr1:91942785-91942804 MsG0180005443.01.T01:intron 45.0%
!! TGCAGTGTTGCGTTGTTTTG+TGG + Chr1:91942421-91942440 None:intergenic 45.0%
!!! GGAGGGAGTACTTTTTAGCA+TGG + Chr1:91941791-91941810 None:intergenic 45.0%
!!! AAAGTTTTTAAATATTTTTT+TGG + Chr1:91940750-91940769 None:intergenic 5.0%
!!! AAGTTTTTAAATATTTTTTT+GGG + Chr1:91940749-91940768 None:intergenic 5.0%
!!! TATCAAATTTAAAATTTAAA+CGG + Chr1:91941646-91941665 None:intergenic 5.0%
AAGTGGCGGTCCTAAAGGAA+AGG - Chr1:91946616-91946635 MsG0180005443.01.T01:intron 50.0%
ACGGTGCCCGTTATGTTTGA+CGG + Chr1:91938537-91938556 None:intergenic 50.0%
AGCAGCCTCATTGTCTCTTG+AGG + Chr1:91945788-91945807 None:intergenic 50.0%
AGGCTACAACATCATACCCC+TGG + Chr1:91947016-91947035 None:intergenic 50.0%
ATCCTTAATCAGTGCCCTGG+GGG + Chr1:91939042-91939061 None:intergenic 50.0%
ATTGATCGCCAAACATGGCG+TGG + Chr1:91938809-91938828 None:intergenic 50.0%
CAGAACTCAATGCCACCAAG+AGG - Chr1:91944140-91944159 MsG0180005443.01.T01:intron 50.0%
CAGGGACTCTTCTGCTTGAA+TGG + Chr1:91945224-91945243 None:intergenic 50.0%
CATCCTTAATCAGTGCCCTG+GGG + Chr1:91939043-91939062 None:intergenic 50.0%
CATTCAGCACATGCCACTGT+CGG + Chr1:91940181-91940200 None:intergenic 50.0%
GAATGAAGTGGCGGTCCTAA+AGG - Chr1:91946611-91946630 MsG0180005443.01.T01:intron 50.0%
GACTACATGTGGCCCATATG+AGG + Chr1:91947036-91947055 None:intergenic 50.0%
GCAGTCAGCGCAGCAAATTT+CGG + Chr1:91946951-91946970 None:intergenic 50.0%
GCATCAAATGGCATCAGTCC+TGG - Chr1:91944083-91944102 MsG0180005443.01.T01:intron 50.0%
GCATCCTTAATCAGTGCCCT+GGG + Chr1:91939044-91939063 None:intergenic 50.0%
GTCATGTTAACCGGTGTCTC+CGG + Chr1:91939188-91939207 None:intergenic 50.0%
GTCCGTACGGTACATTGTCA+AGG - Chr1:91946987-91947006 MsG0180005443.01.T01:intron 50.0%
GTTACAAGCACTTCGGAAGC+AGG - Chr1:91944388-91944407 MsG0180005443.01.T01:intron 50.0%
GTTGCACCTTTCTGCTGCAA+AGG + Chr1:91940417-91940436 None:intergenic 50.0%
TATCGCATCTGAGCAGCTTC+AGG - Chr1:91945267-91945286 MsG0180005443.01.T01:intron 50.0%
TCATGTTAACCGGTGTCTCC+GGG + Chr1:91939187-91939206 None:intergenic 50.0%
TTACAGGAGCCTTCAGGCAA+TGG - Chr1:91944296-91944315 MsG0180005443.01.T01:intron 50.0%
TTGGCCTCAACTGTTCCTCT+TGG + Chr1:91944158-91944177 None:intergenic 50.0%
! GTTAGGGAATTGGTGGTCGT+TGG + Chr1:91941728-91941747 None:intergenic 50.0%
! GTTCTGGTGATGCTGCATTC+AGG + Chr1:91939843-91939862 None:intergenic 50.0%
! TGGGGAAGATAATGGTGCTG+TGG - Chr1:91943753-91943772 MsG0180005443.01.T01:intron 50.0%
!! AATTTGCTGCGCTGACTGCA+CGG - Chr1:91946952-91946971 MsG0180005443.01.T01:intron 50.0%
!! TTTTATTCAGTGGCGGAGCC+AGG + Chr1:91938421-91938440 None:intergenic 50.0%
CAGTCCTGGGGTAGCTTCAT+GGG - Chr1:91944097-91944116 MsG0180005443.01.T01:intron 55.0%
CGCATCCTTAATCAGTGCCC+TGG + Chr1:91939045-91939064 None:intergenic 55.0%
CTAGTACATCCCGGAGACAC+CGG - Chr1:91939175-91939194 MsG0180005443.01.T01:intron 55.0%
GCCACCAAGAGGAACAGTTG+AGG - Chr1:91944151-91944170 MsG0180005443.01.T01:intron 55.0%
GCCTCAACTGTTCCTCTTGG+TGG + Chr1:91944155-91944174 None:intergenic 55.0%
GCGGAACCACAACAGGCTTA+TGG - Chr1:91945381-91945400 MsG0180005443.01.T01:intron 55.0%
GGAATGGATGCTGCAAGCAC+TGG - Chr1:91946362-91946381 MsG0180005443.01.T01:intron 55.0%
GTGGCATTGCCATTGCCTGA+AGG + Chr1:91944308-91944327 None:intergenic 55.0%
TCAGTCCTGGGGTAGCTTCA+TGG - Chr1:91944096-91944115 MsG0180005443.01.T01:intron 55.0%
TCATCCCATGAAGCTACCCC+AGG + Chr1:91944104-91944123 None:intergenic 55.0%
!! ATCTGCTTAGGTGCCGACAG+TGG - Chr1:91940165-91940184 MsG0180005443.01.T01:CDS 55.0%
CGCATCTGAGCAGCTTCAGG+AGG - Chr1:91945270-91945289 MsG0180005443.01.T01:intron 60.0%
!! GTCCCCCAGGGCACTGATTA+AGG - Chr1:91939037-91939056 MsG0180005443.01.T01:intron 60.0%
ATCAGTGCCCTGGGGGACAC+CGG + Chr1:91939035-91939054 None:intergenic 65.0%
CTTAACCCCGGTGTCCCCCA+GGG - Chr1:91939025-91939044 MsG0180005443.01.T01:intron 65.0%
CCTGGGGGACACCGGGGTTA+AGG + Chr1:91939027-91939046 None:intergenic 70.0%
CCTTAACCCCGGTGTCCCCC+AGG - Chr1:91939024-91939043 MsG0180005443.01.T01:intron 70.0%
TCAGTGCCCTGGGGGACACC+GGG + Chr1:91939034-91939053 None:intergenic 70.0%
CAGTGCCCTGGGGGACACCG+GGG + Chr1:91939033-91939052 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 91938329 91947179 91938329 ID=MsG0180005443.01;Name=MsG0180005443.01
Chr1 mRNA 91938329 91947179 91938329 ID=MsG0180005443.01.T01;Parent=MsG0180005443.01;Name=MsG0180005443.01.T01;_AED=0.45;_eAED=0.45;_QI=301|0.83|1|1|0.83|0.71|7|403|808
Chr1 exon 91938329 91938927 91938329 ID=MsG0180005443.01.T01:exon:48686;Parent=MsG0180005443.01.T01
Chr1 exon 91939103 91939146 91939103 ID=MsG0180005443.01.T01:exon:48685;Parent=MsG0180005443.01.T01
Chr1 exon 91939662 91941455 91939662 ID=MsG0180005443.01.T01:exon:48684;Parent=MsG0180005443.01.T01
Chr1 exon 91942338 91942460 91942338 ID=MsG0180005443.01.T01:exon:48683;Parent=MsG0180005443.01.T01
Chr1 exon 91942556 91942756 91942556 ID=MsG0180005443.01.T01:exon:48682;Parent=MsG0180005443.01.T01
Chr1 exon 91942969 91943322 91942969 ID=MsG0180005443.01.T01:exon:48681;Parent=MsG0180005443.01.T01
Chr1 exon 91947164 91947179 91947164 ID=MsG0180005443.01.T01:exon:48680;Parent=MsG0180005443.01.T01
Chr1 five_prime_UTR 91947164 91947179 91947164 ID=MsG0180005443.01.T01:five_prime_utr;Parent=MsG0180005443.01.T01
Chr1 five_prime_UTR 91943038 91943322 91943038 ID=MsG0180005443.01.T01:five_prime_utr;Parent=MsG0180005443.01.T01
Chr1 CDS 91942969 91943037 91942969 ID=MsG0180005443.01.T01:cds;Parent=MsG0180005443.01.T01
Chr1 CDS 91942556 91942756 91942556 ID=MsG0180005443.01.T01:cds;Parent=MsG0180005443.01.T01
Chr1 CDS 91942338 91942460 91942338 ID=MsG0180005443.01.T01:cds;Parent=MsG0180005443.01.T01
Chr1 CDS 91939662 91941455 91939662 ID=MsG0180005443.01.T01:cds;Parent=MsG0180005443.01.T01
Chr1 CDS 91939103 91939146 91939103 ID=MsG0180005443.01.T01:cds;Parent=MsG0180005443.01.T01
Chr1 CDS 91938732 91938927 91938732 ID=MsG0180005443.01.T01:cds;Parent=MsG0180005443.01.T01
Chr1 three_prime_UTR 91938329 91938731 91938329 ID=MsG0180005443.01.T01:three_prime_utr;Parent=MsG0180005443.01.T01
Gene Sequence

>MsG0180005443.01.T01

ATGTTCAAGTCATGGAGCAAGAAAAACAAGATCAAAGCTGTATTCAAATTGGAATTTCAAGCAACTCAGGTTCCAAAGATGAAAAAGAATGCATTGATGGTATCTTTGGTGCCAGATGATGTTGGGAAACCAACAGTGAAACTAGAGAAAACTGCTGTTCAAGATGGGACTTGTTTATGGGAGAATCCAATTTTTGAATCTGTTAAACTTGTTAGGGATTCAAAATCAGGAATTCTACATGAGAAAATCTACCATTTCATTGTTGCAACTGGTTCTTCAAAATCTGGCTACTTGGGAGAAGCTTCAATTGATTTTGCTGATTTTTTAACAGAAACTGAGCCAATTACTGTTTCTCTGCCCTTGAAATTTGCAAATTCGGGCGTAGTTTTACATAATAGCAACTTGGCCAAGAGTAGATCCGATGCATCAAATGGCATCAGTCCTGGGGTAGCTTCATGGGATGACCCTTATAGCTTCAGACAGAACTCAATGCCACCAAGAGGAACAGTTGAGGCCAATGCAACACAAAATCAAGTGCATAAGAGGTCAAATACAGGCTGGTCAATGGGTTCAGCATCAGATGGAAGTTTAGGTGATTGGACAAACGGAACAGAAGACAATTTTCCGAGAGAAAGATTACAGGAGCCTTCAGGCAATGGCAATGCCACCGAAAATCTCAAAAGTGAGATTGTTTCTCTGAAGAGGCAGGCAGAATTATCGGAACTAGAGTTACAAGCACTTCGGAAGCAGGTAGAAAAAGAAAGCAGTCGGGGACAGAATTTATCAAGACAAATCAACGGTCTCAGGGACGAAAGAGATTCACTCAAAACTAAATATGAGCAACTCAAGTCCCAACAGAACTTCAATAATAATAGTAATAATGAGACCAAGACCTCTAAAAGCTTGAAGTCTGATATTGATAATACTAGGCTTCAGTTAGATGCAATAAAGGAAGAGCTTGTTTATGAAAAAGAAATGAGTGGAAATCTTCAATTGCAACTGCAGAAAACACAGAACTCAAATTCTGAACTTCTTTTGGCTGTGACAGACCTTGAAGCAATGCTAGAACAAAAGAATAAGGAAATATTGGATCTATCTTCCAATAGGAAATCTCAAAAGATTACTAAAGAGCGTGATAATGACACAGAATTAAATGTTTTGCGGCAGAAGATTGCAGACCAGAATAGTGAAATAGAGAATTGTTATAAGCAACGTGAGGAGCTAAGCGAGCTTATAAAAGAGCTCACAGTGGAGTATGATCTTCTTAAGAATGAAAATGTGGATATCTCTCTGAGATTAAAGCAAGATGAAGCTCAACATATCATGTTACAAAATGAACACTCGGCTTCTTTAGTTACAATACAACAACTTGAATCCCAAGTGAAGAGACTAGAAGAAAAGATAGAGATGCAGGAAGATGAATTTTCATCGTCATTGGTCTCCATCAAGGAACTTGAAAATCAAGTTAAGTCTTTGGAGAAAGAACTGAGAGTACAGGCAGATAAATTTGAAGATGAACTCCAGGCTATGCAAAATGAAAAAACTGAGCAGGAAGAACGGGCCATTCAAGCAGAAGAGTCCCTGAGAAAGACGAGACACAATAATGCTATCGCATCTGAGCAGCTTCAGGAGGAATATAAATTGCTTTCTGTTGAAATGTCATGCAAAGTTGAAGAGAATGAAAAGATGATAACGAAAGCAATCGAAGAAGCTGATGAATTGCGGAACCACAACAGGCTTATGGAAGAAATGCTCCAGAAATGCAATCAAGAGCTCAGGCAAATATCAGATCAACATGAATTGAAAGTGGAAGAGCTCTTGAAACAAATAAGTACAAAAGAAAAAACAATGGAACAGATGTCGCAAGAGTTAGATGTGAAAACTAAAGAACTTGAAGATGCACAAAGGCACAGGGATGAAAAGGATGCTGCATTATCAAAGCAAATTCAAATGCTTGAGATCCAGCACAATGAAATGAAACACAGTTTGCAGAAAGAACAGGTGGACAGAGAAAATATGAAGAAACATATATCTCAATTAGAAGGAGAGGTTAAGAAGAAAGAAGCAGAATTAAATGCTATGGAAAAGAAGCTCAAGAATAACAGAGGACGAGGTGCAGCCATGACCTCAAGAGACAATGAGGCTGCTAAGGCAAATGCAAAGAAATCAAAATCAGAAATGCATAAGGGAATGGATGCTGCAAGCACTGGTATTAGCAAGTCTGAAGGAAGTGATGCTGAACGCCTTACAAAGGAATTATTGAATGAAGTGGCGGTCCTAAAGGAAAGGAACACGAATATGGAAACTGAACTGAAAGAAATGGAAGAAAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAGCTTGTTATGGCTGTACGTAATCTCAAGAATGGAAAGAAGAACTAG

Protein sequence

>MsG0180005443.01.T01

MFKSWSKKNKIKAVFKLEFQATQVPKMKKNALMVSLVPDDVGKPTVKLEKTAVQDGTCLWENPIFESVKLVRDSKSGILHEKIYHFIVATGSSKSGYLGEASIDFADFLTETEPITVSLPLKFANSGVVLHNSNLAKSRSDASNGISPGVASWDDPYSFRQNSMPPRGTVEANATQNQVHKRSNTGWSMGSASDGSLGDWTNGTEDNFPRERLQEPSGNGNATENLKSEIVSLKRQAELSELELQALRKQVEKESSRGQNLSRQINGLRDERDSLKTKYEQLKSQQNFNNNSNNETKTSKSLKSDIDNTRLQLDAIKEELVYEKEMSGNLQLQLQKTQNSNSELLLAVTDLEAMLEQKNKEILDLSSNRKSQKITKERDNDTELNVLRQKIADQNSEIENCYKQREELSELIKELTVEYDLLKNENVDISLRLKQDEAQHIMLQNEHSASLVTIQQLESQVKRLEEKIEMQEDEFSSSLVSIKELENQVKSLEKELRVQADKFEDELQAMQNEKTEQEERAIQAEESLRKTRHNNAIASEQLQEEYKLLSVEMSCKVEENEKMITKAIEEADELRNHNRLMEEMLQKCNQELRQISDQHELKVEELLKQISTKEKTMEQMSQELDVKTKELEDAQRHRDEKDAALSKQIQMLEIQHNEMKHSLQKEQVDRENMKKHISQLEGEVKKKEAELNAMEKKLKNNRGRGAAMTSRDNEAAKANAKKSKSEMHKGMDAASTGISKSEGSDAERLTKELLNEVAVLKERNTNMETELKEMEERYSEISLKFAEVEGERQQLVMAVRNLKNGKKN*