AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014498.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014498.01.T01 MTR_3g051060 63.862 725 229 11 1 704 27 739 0.0 910
MsG0380014498.01.T01 MTR_3g058570 91.371 394 32 1 314 707 1 392 0.0 710
MsG0380014498.01.T01 MTR_5g085340 49.196 746 317 13 5 707 26 752 0.0 648
MsG0380014498.01.T01 MTR_5g085350 48.904 730 328 13 2 707 23 731 0.0 617
MsG0380014498.01.T01 MTR_5g085350 47.914 743 329 13 2 707 23 744 0.0 612
MsG0380014498.01.T01 MTR_5g085360 41.545 751 348 14 5 702 26 738 6.83e-172 510
MsG0380014498.01.T01 MTR_3g050500 40.599 734 359 17 6 698 31 728 5.30e-151 456
MsG0380014498.01.T01 MTR_2g020510 35.852 728 394 12 2 703 9 689 2.14e-138 422
MsG0380014498.01.T01 MTR_3g058550 93.750 192 11 1 27 217 1 192 9.51e-125 370
MsG0380014498.01.T01 MTR_2g020450 36.264 728 393 15 2 703 9 691 2.84e-124 386
MsG0380014498.01.T01 MTR_2g020470 34.063 731 385 15 2 703 9 671 5.14e-121 377
MsG0380014498.01.T01 MTR_2g017930 28.090 712 424 17 10 699 12 657 1.26e-55 202
MsG0380014498.01.T01 MTR_3g055310 34.364 291 183 3 395 684 53 336 2.13e-46 169
MsG0380014498.01.T01 MTR_3g055310 34.364 291 183 3 395 684 116 399 3.25e-46 170
MsG0380014498.01.T01 MTR_3g055310 34.364 291 183 3 395 684 168 451 8.98e-46 170
MsG0380014498.01.T01 MTR_3g055310 34.364 291 183 3 395 684 196 479 1.40e-45 170
MsG0380014498.01.T01 MTR_3g055310 34.364 291 183 3 395 684 194 477 1.76e-45 170
MsG0380014498.01.T01 MTR_3g055310 34.364 291 183 3 395 684 221 504 2.71e-45 170
MsG0380014498.01.T01 MTR_5g091220 35.117 299 186 3 395 692 309 600 3.60e-45 171
MsG0380014498.01.T01 MTR_5g091220 24.771 218 141 4 7 219 39 238 5.38e-12 69.3
MsG0380014498.01.T01 MTR_2g438740 34.106 302 189 3 394 692 271 565 9.59e-45 169
MsG0380014498.01.T01 MTR_2g438400 33.446 296 188 3 399 692 255 543 2.74e-42 162
MsG0380014498.01.T01 MTR_5g028190 32.333 300 194 4 398 694 239 532 1.37e-41 159
MsG0380014498.01.T01 MTR_5g028190 32.353 204 117 6 25 218 7 199 6.90e-16 81.6
MsG0380014498.01.T01 MTR_5g028130 30.476 315 199 6 388 694 34 336 4.19e-41 153
MsG0380014498.01.T01 MTR_2g438720 32.372 312 201 5 384 692 386 690 1.32e-40 159
MsG0380014498.01.T01 MTR_2g438700 31.949 313 203 5 384 693 384 689 3.63e-40 157
MsG0380014498.01.T01 MTR_3g051020 45.181 166 81 2 1 166 25 180 2.62e-39 144
MsG0380014498.01.T01 MTR_2g438440 33.108 296 189 3 399 692 396 684 6.32e-39 154
MsG0380014498.01.T01 MTR_2g438640 33.227 313 196 7 384 692 386 689 1.00e-37 150
MsG0380014498.01.T01 MTR_3g455790 33.798 287 179 5 395 679 304 581 1.09e-37 149
MsG0380014498.01.T01 MTR_5g028450 34.667 300 183 6 399 692 1 293 2.06e-37 142
MsG0380014498.01.T01 MTR_2g438640 32.588 313 172 7 384 692 386 663 2.43e-34 140
MsG0380014498.01.T01 MTR_3g452020 29.787 282 190 3 395 675 129 403 6.07e-33 132
MsG0380014498.01.T01 MTR_3g452020 29.739 306 205 4 395 697 305 603 4.44e-32 132
MsG0380014498.01.T01 MTR_2g438760 29.630 297 194 6 402 692 273 560 1.10e-31 130
MsG0380014498.01.T01 MTR_2g438760 29.082 196 114 6 7 199 56 229 6.56e-11 65.9
MsG0380014498.01.T01 MTR_5g028930 30.855 269 176 4 395 660 317 578 1.37e-29 125
MsG0380014498.01.T01 MTR_6g017215 34.054 185 121 1 504 688 6 189 5.11e-29 116
MsG0380014498.01.T01 MTR_2g438640 36.898 187 114 4 507 692 403 586 8.52e-25 110
MsG0380014498.01.T01 MTR_5g028110 33.784 148 95 3 548 694 28 173 1.43e-20 90.1
MsG0380014498.01.T01 MTR_5g028690 29.064 203 136 3 498 694 35 235 4.22e-19 87.8
MsG0380014498.01.T01 MTR_5g028900 35.915 142 79 3 519 660 17 146 8.57e-18 81.6
MsG0380014498.01.T01 MTR_5g028840 33.108 148 99 0 504 651 2 149 2.00e-16 79.0
MsG0380014498.01.T01 MTR_2g438470 37.903 124 72 4 460 580 376 497 2.77e-14 76.6
MsG0380014498.01.T01 MTR_2g438580 39.506 81 48 1 519 599 3 82 1.65e-12 63.9
MsG0380014498.01.T01 MTR_1g113760 23.676 321 221 6 394 697 235 548 8.54e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014498.01.T01 AT5G35810 33.550 307 188 4 395 692 31 330 1.04e-44 164
MsG0380014498.01.T01 AT3G18670 32.907 313 198 5 398 707 292 595 1.38e-43 166
MsG0380014498.01.T01 AT3G18670 32.907 313 198 5 398 707 347 650 1.59e-43 167
MsG0380014498.01.T01 AT3G18670 25.943 212 146 4 9 218 60 262 1.66e-14 77.8
MsG0380014498.01.T01 AT5G04730 34.740 308 179 7 398 696 297 591 1.67e-42 163
MsG0380014498.01.T01 AT5G04700 33.770 305 192 5 396 696 360 658 4.64e-38 151
MsG0380014498.01.T01 AT3G54065 36.190 210 128 1 490 693 8 217 4.45e-36 136
MsG0380014498.01.T01 AT5G04690 32.237 304 193 6 396 696 341 634 6.10e-36 144
MsG0380014498.01.T01 AT5G04690 32.237 304 193 6 396 696 355 648 7.12e-36 144
MsG0380014498.01.T01 AT5G04690 32.333 300 190 6 396 692 321 610 8.04e-36 144
MsG0380014498.01.T01 AT5G04680 32.258 310 190 7 396 692 376 678 1.17e-30 129
MsG0380014498.01.T01 AT5G04680 32.258 310 190 7 396 692 347 649 1.26e-30 128
MsG0380014498.01.T01 AT5G04680 32.698 315 189 8 394 692 219 526 1.27e-30 127
MsG0380014498.01.T01 AT5G04680 32.258 310 190 7 396 692 333 635 1.35e-30 128

Find 123 sgRNAs with CRISPR-Local

Find 514 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGATCATATACCTTTATT+TGG 0.076238 3:-55687368 None:intergenic
ATCTTTACCTTTGGCCTTTC+AGG 0.130018 3:+55686934 MsG0380014498.01.T01:CDS
TCAACTCTTGAACATATTTA+TGG 0.152621 3:+55687235 MsG0380014498.01.T01:CDS
TAAACGTGAGAAAGCAATTT+TGG 0.156280 3:+55687889 MsG0380014498.01.T01:CDS
TTTGCTTTGTCTTCAGTAAT+TGG 0.161186 3:+55689372 MsG0380014498.01.T01:CDS
GATATACATTAGAAGGAAAT+TGG 0.191041 3:+55681497 MsG0380014498.01.T01:CDS
CATATCAATTCTGAAATCTT+TGG 0.253328 3:-55689457 None:intergenic
TTCCAAGTTAAGGTCGTATA+TGG 0.261111 3:-55687993 None:intergenic
ATTGACATTTATAACAATAA+TGG 0.275839 3:+55681790 MsG0380014498.01.T01:CDS
GTGGCATATAAAATGGTTTC+AGG 0.287876 3:+55688222 MsG0380014498.01.T01:CDS
AGCGACGAACATTGCAATAA+TGG 0.298105 3:-55689520 None:intergenic
TATGCCAAGGAAACTTCTTT+TGG 0.300612 3:+55689476 MsG0380014498.01.T01:CDS
CCAATGTCGTTGAGGCATTA+AGG 0.302274 3:+55688056 MsG0380014498.01.T01:CDS
TAACATGTGTCGTAGTTCTT+TGG 0.306623 3:-55686239 None:intergenic
AAAACTATGCCACATGTCTT+TGG 0.311259 3:+55686893 MsG0380014498.01.T01:CDS
CTTAAATGTAAGAATGAAAA+AGG 0.315632 3:+55681679 MsG0380014498.01.T01:CDS
AAATGATGTGGCATATAAAA+TGG 0.339034 3:+55688215 MsG0380014498.01.T01:CDS
GTTCCAATCTCGATCACTTT+TGG 0.346166 3:-55688173 None:intergenic
ACTCACATCTCCTGTTGGTT+TGG 0.348176 3:-55687318 None:intergenic
ATGATCATATACCTTTATTT+GGG 0.353584 3:-55687367 None:intergenic
CTAAAGGGATATACATTAGA+AGG 0.366591 3:+55681490 MsG0380014498.01.T01:CDS
ACCTTTGGCCTTTCAGGAGT+TGG 0.369806 3:+55686940 MsG0380014498.01.T01:CDS
TATGATTACAACCCAAATAA+AGG 0.379118 3:+55687356 MsG0380014498.01.T01:CDS
CAACTCTTGAACATATTTAT+GGG 0.382900 3:+55687236 MsG0380014498.01.T01:CDS
GTAGTAGCAGCACTCCTTGC+CGG 0.383621 3:+55689258 MsG0380014498.01.T01:CDS
GTTGCATACATCTTTACCTT+TGG 0.391109 3:+55686925 MsG0380014498.01.T01:CDS
TGTTTCTTGCTGCATTGTCT+TGG 0.401537 3:+55681824 MsG0380014498.01.T01:CDS
ATCACTTGTCTTTGGCACTT+TGG 0.403980 3:-55689685 None:intergenic
TACTTGTAGCAGTTGAGAAC+AGG 0.405850 3:+55688029 MsG0380014498.01.T01:CDS
AAGATCTTATTCGAAGCAAT+GGG 0.406982 3:+55681923 MsG0380014498.01.T01:CDS
TTGGTTTGGCGCCGGTTCCC+AGG 0.409393 3:-55687304 None:intergenic
GTGCCAAAGACAAGTGATAA+GGG 0.412267 3:+55689690 MsG0380014498.01.T01:CDS
AAAGCGGATACAAGATGATA+TGG 0.412635 3:+55683413 MsG0380014498.01.T01:CDS
GATCGAGATTGGAACATATC+TGG 0.414209 3:+55688181 MsG0380014498.01.T01:CDS
TTTGGTCAATAAGAAAGAAA+TGG 0.416646 3:-55689554 None:intergenic
AATATATGTGAATGTATCAT+AGG 0.422438 3:+55681742 MsG0380014498.01.T01:CDS
AGATGAAGCAAAAGCACAAA+TGG 0.424240 3:+55687207 MsG0380014498.01.T01:CDS
GCAGGCTTTCCTTCCAATGC+TGG 0.425796 3:-55689339 None:intergenic
AATCCCAAAAGAAGTTTCCT+TGG 0.428987 3:-55689480 None:intergenic
GGAACCGGCGCCAAACCAAC+AGG 0.436921 3:+55687308 MsG0380014498.01.T01:CDS
TTCCATATACGACCTTAACT+TGG 0.451334 3:+55687991 MsG0380014498.01.T01:CDS
CTACCAAAAGTGATCGAGAT+TGG 0.451436 3:+55688170 MsG0380014498.01.T01:CDS
CTCTCAAACTTCTTGCTACC+AGG 0.458223 3:+55683377 MsG0380014498.01.T01:CDS
GGCGGCAACAGAAGTGAAAC+AGG 0.460466 3:+55689312 MsG0380014498.01.T01:CDS
GTTTCACTTCTGTTGCCGCC+TGG 0.465087 3:-55689309 None:intergenic
ATCTCCTGTTGGTTTGGCGC+CGG 0.466390 3:-55687312 None:intergenic
AAAGATCTTATTCGAAGCAA+TGG 0.472990 3:+55681922 MsG0380014498.01.T01:CDS
GTTCTAACTGTGAAATGCTC+TGG 0.475307 3:-55689132 None:intergenic
AAATGGCATAGTTGAAATAG+TGG 0.476650 3:+55687943 MsG0380014498.01.T01:CDS
ATATACATTAGAAGGAAATT+GGG 0.481000 3:+55681498 MsG0380014498.01.T01:CDS
TATGAATCGTACCTGGGAAC+CGG 0.482696 3:+55687293 MsG0380014498.01.T01:CDS
ATTGTCATTCAAAACAAACT+TGG 0.482841 3:+55683346 MsG0380014498.01.T01:CDS
TATCTATTTATTGATAAATG+TGG 0.483139 3:+55686260 MsG0380014498.01.T01:CDS
GTTCCCAGGTACGATTCATA+AGG 0.485330 3:-55687290 None:intergenic
AGTGCCAAAGACAAGTGATA+AGG 0.491616 3:+55689689 MsG0380014498.01.T01:CDS
CATGAAACACTGGTAACAAA+AGG 0.493971 3:+55689198 MsG0380014498.01.T01:CDS
TGAAACAGGTGAACCAGCAT+TGG 0.494721 3:+55689326 MsG0380014498.01.T01:CDS
ATCTCTATTGTGCTAAACTT+AGG 0.495427 3:-55681550 None:intergenic
TTTCTTTCTTATCCACACCT+TGG 0.496642 3:-55688126 None:intergenic
GTATTCTTCACTGTGCCATC+CGG 0.504088 3:+55681950 MsG0380014498.01.T01:CDS
CACATGGATCAGTATACTAA+AGG 0.504814 3:+55689102 MsG0380014498.01.T01:intron
TTCGAGAAGTGAGTATGGAC+AGG 0.510529 3:-55689428 None:intergenic
TCTCCAGAAGACATGCTAAA+GGG 0.510582 3:+55681475 None:intergenic
AAATGTGGAGAATATGCAAC+CGG 0.512254 3:+55686275 MsG0380014498.01.T01:CDS
CTAAGAAGATCAATGTAAAG+TGG 0.514162 3:-55689651 None:intergenic
AACAAAGATGACAAAACAGC+TGG 0.522635 3:+55689156 MsG0380014498.01.T01:CDS
CCTTAATGCCTCAACGACAT+TGG 0.524122 3:-55688056 None:intergenic
AATATGGGAGAGAAGGACAT+AGG 0.530370 3:+55686841 MsG0380014498.01.T01:CDS
GAATCCTTATGAATCGTACC+TGG 0.530951 3:+55687286 MsG0380014498.01.T01:CDS
GTTCGACTCACATCTCCTGT+TGG 0.531484 3:-55687323 None:intergenic
GGAAGAAGCTTGCGTTCAGA+TGG 0.532689 3:-55686868 None:intergenic
TTCTCCAGAAGACATGCTAA+AGG 0.534324 3:+55681474 None:intergenic
CCACCACAATCACTCCTACC+TGG 0.537786 3:-55681883 None:intergenic
CTTGATGCTGCAAGATGCAA+AGG 0.544577 3:-55681709 None:intergenic
GCTATTGCATACAAAGTCAC+AGG 0.544603 3:-55689621 None:intergenic
AACTCTTGAACATATTTATG+GGG 0.550642 3:+55687237 MsG0380014498.01.T01:CDS
AAAGCAAATGCATCAAATGC+AGG 0.558623 3:-55689357 None:intergenic
TTAAGGTCGTATATGGAACT+TGG 0.559940 3:-55687986 None:intergenic
ATTTCAGAATTGATATGCCA+AGG 0.560690 3:+55689463 MsG0380014498.01.T01:CDS
TATATGCCACATCATTTGCA+AGG 0.563049 3:-55688209 None:intergenic
TTGCATCTTGCAGCATCAAG+AGG 0.564363 3:+55681712 MsG0380014498.01.T01:CDS
TGGTAACAAAAGGTAGTGAA+TGG 0.564901 3:+55689208 MsG0380014498.01.T01:CDS
AGGAGAAGGTCGTGAAAGGA+AGG 0.566958 3:+55681762 MsG0380014498.01.T01:CDS
CTACACGTGGCAGTAAATGA+TGG 0.568764 3:+55681595 MsG0380014498.01.T01:CDS
AGCAAGTGACTGAATAAATG+AGG 0.575232 3:-55689596 None:intergenic
GCTACATCAAGCACTGTACC+AGG 0.575420 3:+55689291 MsG0380014498.01.T01:CDS
GACAATGCAGCAAGAAACAA+AGG 0.580270 3:-55681820 None:intergenic
CAAGAAATCACATGAAACAC+TGG 0.586075 3:+55689188 MsG0380014498.01.T01:CDS
TCATAGGAGAAGGTCGTGAA+AGG 0.587064 3:+55681758 MsG0380014498.01.T01:CDS
CTATCAAAAGGTATACCTGC+GGG 0.589963 3:+55686146 MsG0380014498.01.T01:intron
AAACCAGGTAGGAGTGATTG+TGG 0.590286 3:+55681880 MsG0380014498.01.T01:CDS
GTGCTGCCTTGCAAATGATG+TGG 0.592481 3:+55688203 MsG0380014498.01.T01:CDS
ATATGGGAGAGAAGGACATA+GGG 0.592965 3:+55686842 MsG0380014498.01.T01:CDS
TGTGAATGTATCATAGGAGA+AGG 0.593415 3:+55681748 MsG0380014498.01.T01:CDS
ATATTTGATGATCTAATCCA+AGG 0.593439 3:+55688109 MsG0380014498.01.T01:CDS
GACACTTACCAACTCCTGAA+AGG 0.593684 3:-55686948 None:intergenic
ACAGGTGAACCAGCATTGGA+AGG 0.599054 3:+55689330 MsG0380014498.01.T01:CDS
TACAGTGCTTGATGTAGCGA+AGG 0.603317 3:-55689286 None:intergenic
AGGAAATTGGGATCAAGTTG+CGG 0.604394 3:+55681510 MsG0380014498.01.T01:CDS
ATAGAGATCAGCAAAAGTAG+AGG 0.618194 3:+55681565 MsG0380014498.01.T01:CDS
TGATGATCTAATCCAAGGTG+TGG 0.620914 3:+55688114 MsG0380014498.01.T01:CDS
TGCCAAAGACAAGTGATAAG+GGG 0.626830 3:+55689691 MsG0380014498.01.T01:CDS
GCGGATACAAGATGATATGG+TGG 0.635479 3:+55683416 MsG0380014498.01.T01:CDS
CAGGAGAACCAATGTCGTTG+AGG 0.637648 3:+55688048 MsG0380014498.01.T01:CDS
GGCAGTAAATGATGGCAATG+AGG 0.641440 3:+55681603 MsG0380014498.01.T01:CDS
ACCAACTCCTGAAAGGCCAA+AGG 0.642803 3:-55686941 None:intergenic
TGATGTAGCGAAGGAAACAC+CGG 0.642955 3:-55689277 None:intergenic
AATCCTTATGAATCGTACCT+GGG 0.643064 3:+55687287 MsG0380014498.01.T01:CDS
GCCAAAGACAAGTGATAAGG+GGG 0.646133 3:+55689692 MsG0380014498.01.T01:CDS
AGGCCCTCAGCCTTCAAAAG+CGG 0.646339 3:+55683397 MsG0380014498.01.T01:CDS
AAGCAAAAGCACAAATGGAG+TGG 0.647330 3:+55687212 MsG0380014498.01.T01:CDS
CTGGTAGCAAGAAGTTTGAG+AGG 0.648943 3:-55683376 None:intergenic
TAGCGAAGGAAACACCGGCA+AGG 0.651641 3:-55689272 None:intergenic
ACTCTTGAACATATTTATGG+GGG 0.655003 3:+55687238 MsG0380014498.01.T01:CDS
CTATTGCATACAAAGTCACA+GGG 0.657703 3:-55689620 None:intergenic
TATCTCATCAAGTTTAAACC+AGG 0.665314 3:+55681865 MsG0380014498.01.T01:CDS
TAGAGGAACAGCACTACACG+TGG 0.671680 3:+55681582 MsG0380014498.01.T01:CDS
TCATCAAGTTTAAACCAGGT+AGG 0.683479 3:+55681869 MsG0380014498.01.T01:CDS
ACTATCAAAAGGTATACCTG+CGG 0.692041 3:+55686145 MsG0380014498.01.T01:intron
TGATGAAAATGATGACGATG+AGG 0.715378 3:+55687844 MsG0380014498.01.T01:CDS
CCAGGTAGGAGTGATTGTGG+TGG 0.717465 3:+55681883 MsG0380014498.01.T01:CDS
AGATCTTATTCGAAGCAATG+GGG 0.719759 3:+55681924 MsG0380014498.01.T01:CDS
ACATCAAGCACTGTACCAGG+CGG 0.758516 3:+55689294 MsG0380014498.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTATTTTAATAATTTTA+AGG - Chr3:55685392-55685411 None:intergenic 0.0%
!! AATTAATATAAATATTGTAC+TGG - Chr3:55683220-55683239 None:intergenic 10.0%
!! ATATACATATAAATATTAGT+AGG - Chr3:55683280-55683299 None:intergenic 10.0%
!! ATTAATATAAATATTGTACT+GGG - Chr3:55683219-55683238 None:intergenic 10.0%
!! TATAATTTATAAACCATTTA+AGG + Chr3:55683798-55683817 MsG0380014498.01.T01:intron 10.0%
!! TATACATATAAATATTAGTA+GGG - Chr3:55683279-55683298 None:intergenic 10.0%
!!! ATATATTTATTGTTGTTTTT+TGG + Chr3:55684941-55684960 MsG0380014498.01.T01:intron 10.0%
!!! TGTATTTTTATTTTAAATCA+AGG + Chr3:55687539-55687558 MsG0380014498.01.T01:intron 10.0%
!! AAAAAAATAAGGGAATTTAT+TGG + Chr3:55684605-55684624 MsG0380014498.01.T01:intron 15.0%
!! AAATAAAAATTGAAACCATT+TGG + Chr3:55686614-55686633 MsG0380014498.01.T01:intron 15.0%
!! AAATATTGGATATATAAATG+AGG - Chr3:55682827-55682846 None:intergenic 15.0%
!! AAATGGTTTATAAATTATAG+TGG - Chr3:55683797-55683816 None:intergenic 15.0%
!! AACAATATAACATTGTAAAA+AGG + Chr3:55686536-55686555 MsG0380014498.01.T01:intron 15.0%
!! ATTACAAAAATATCTATGTA+AGG + Chr3:55683931-55683950 MsG0380014498.01.T01:intron 15.0%
!! ATTGACATTTATAACAATAA+TGG + Chr3:55681790-55681809 MsG0380014498.01.T01:CDS 15.0%
!! TAAATAAATAAATATCATGC+CGG - Chr3:55688493-55688512 None:intergenic 15.0%
!! TATCTATTTATTGATAAATG+TGG + Chr3:55686260-55686279 MsG0380014498.01.T01:CDS 15.0%
!! TTAGATTCATTCATTAAATA+AGG - Chr3:55682105-55682124 None:intergenic 15.0%
!! TTTATGAATGTGTAAAATAT+TGG - Chr3:55682841-55682860 None:intergenic 15.0%
!!! AATGCAATTAAAAAAAGTAT+AGG + Chr3:55683015-55683034 MsG0380014498.01.T01:intron 15.0%
!!! AATTTTGTGCAAAAAAAATA+AGG + Chr3:55684594-55684613 MsG0380014498.01.T01:intron 15.0%
!!! AGTTTAACTACTTTTTTTTT+AGG - Chr3:55684751-55684770 None:intergenic 15.0%
!!! ATATTTCTAAAGAACAAAAA+GGG - Chr3:55684925-55684944 None:intergenic 15.0%
!!! ATTTTGTGCAAAAAAAATAA+GGG + Chr3:55684595-55684614 MsG0380014498.01.T01:intron 15.0%
!!! GTTTAACTACTTTTTTTTTA+GGG - Chr3:55684750-55684769 None:intergenic 15.0%
!!! TAATACCATATTAATTTGAA+CGG - Chr3:55685253-55685272 None:intergenic 15.0%
!!! TATATTTCTAAAGAACAAAA+AGG - Chr3:55684926-55684945 None:intergenic 15.0%
!!! TATTGATAATTGTTTGTTAT+GGG + Chr3:55684469-55684488 MsG0380014498.01.T01:intron 15.0%
!!! TATTTATTTTCTTTCAACTT+AGG + Chr3:55688245-55688264 MsG0380014498.01.T01:intron 15.0%
!!! TTAATAATTTTAAGGAGAAA+TGG - Chr3:55685384-55685403 None:intergenic 15.0%
!!! TTATTGATAATTGTTTGTTA+TGG + Chr3:55684468-55684487 MsG0380014498.01.T01:intron 15.0%
!!! TTTGAAATATGCATTATTTT+GGG - Chr3:55688317-55688336 None:intergenic 15.0%
!!! TTTTATTTTAAATCAAGGAA+GGG + Chr3:55687544-55687563 MsG0380014498.01.T01:intron 15.0%
!!! TTTTGAAATATGCATTATTT+TGG - Chr3:55688318-55688337 None:intergenic 15.0%
!!! TTTTTATTTTAAATCAAGGA+AGG + Chr3:55687543-55687562 MsG0380014498.01.T01:intron 15.0%
!!! TTTTTCATTCTTACATTTAA+GGG - Chr3:55681680-55681699 None:intergenic 15.0%
!! AAATTATAGTTGACCTTAAA+TGG - Chr3:55683814-55683833 None:intergenic 20.0%
!! AACTACTTTGATCAAAATTA+AGG - Chr3:55684310-55684329 None:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+TGG - Chr3:55685972-55685991 None:intergenic 20.0%
!! AAGAATCATATATTATCGAA+GGG + Chr3:55685464-55685483 MsG0380014498.01.T01:intron 20.0%
!! AATATATGTGAATGTATCAT+AGG + Chr3:55681742-55681761 MsG0380014498.01.T01:CDS 20.0%
!! AATGATCATATACCTTTATT+TGG - Chr3:55687371-55687390 None:intergenic 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG - Chr3:55685971-55685990 None:intergenic 20.0%
!! AGATTAAAAGTTGAATATGA+TGG + Chr3:55682395-55682414 MsG0380014498.01.T01:intron 20.0%
!! ATATACATTAGAAGGAAATT+GGG + Chr3:55681498-55681517 MsG0380014498.01.T01:CDS 20.0%
!! ATATATAAACACTTACTAGT+TGG + Chr3:55685971-55685990 MsG0380014498.01.T01:intron 20.0%
!! CAATCAATTAATAATGCATA+TGG + Chr3:55682059-55682078 MsG0380014498.01.T01:intron 20.0%
!! CTTAAATGTAAGAATGAAAA+AGG + Chr3:55681679-55681698 MsG0380014498.01.T01:CDS 20.0%
!! GAAATTCAAATTTAACAGTT+TGG - Chr3:55684971-55684990 None:intergenic 20.0%
!! GATCATAATAGGTTATATAT+GGG + Chr3:55687472-55687491 MsG0380014498.01.T01:intron 20.0%
!! GATTAAAAGTTGAATATGAT+GGG + Chr3:55682396-55682415 MsG0380014498.01.T01:intron 20.0%
!! GTATTATTACCATTCTATTA+TGG + Chr3:55685267-55685286 MsG0380014498.01.T01:intron 20.0%
!! GTCTTAAATATAAGTGAAAT+TGG - Chr3:55687431-55687450 None:intergenic 20.0%
!! TATATAAACACTTACTAGTT+GGG + Chr3:55685972-55685991 MsG0380014498.01.T01:intron 20.0%
!! TCAAAGAATATTAATTGGTT+TGG - Chr3:55688444-55688463 None:intergenic 20.0%
!! TGATCATAATAGGTTATATA+TGG + Chr3:55687471-55687490 MsG0380014498.01.T01:intron 20.0%
!! TGCTTATAATAATGATCAAA+AGG - Chr3:55682020-55682039 None:intergenic 20.0%
!! TGGTTTATTAATAAATTGCA+TGG + Chr3:55682323-55682342 MsG0380014498.01.T01:intron 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG - Chr3:55686066-55686085 None:intergenic 20.0%
!! TTCGATAATATATGATTCTT+CGG - Chr3:55685464-55685483 None:intergenic 20.0%
!!! ACTTTTAATCTACAATAGTA+TGG - Chr3:55682386-55682405 None:intergenic 20.0%
!!! ATATTTTTTCTATTTGGCTA+GGG + Chr3:55686335-55686354 MsG0380014498.01.T01:intron 20.0%
!!! ATCTTATTTCATCTTTATAG+AGG - Chr3:55684878-55684897 None:intergenic 20.0%
!!! ATGATCATATACCTTTATTT+GGG - Chr3:55687370-55687389 None:intergenic 20.0%
!!! ATTTCACTTATATTTAAGAC+TGG + Chr3:55687431-55687450 MsG0380014498.01.T01:intron 20.0%
!!! ATTTTGCTAATTGTTTGTTA+TGG + Chr3:55684386-55684405 MsG0380014498.01.T01:intron 20.0%
!!! CATACTATGAATTTTGTATT+CGG + Chr3:55682174-55682193 MsG0380014498.01.T01:intron 20.0%
!!! CATAGTATAAATTTTCTCTA+AGG + Chr3:55686676-55686695 MsG0380014498.01.T01:intron 20.0%
!!! CATTTTTATTTTCCAAGTTA+AGG - Chr3:55688006-55688025 None:intergenic 20.0%
!!! CTTTTTCATTCTTACATTTA+AGG - Chr3:55681681-55681700 None:intergenic 20.0%
!!! GATTAATGACCTTTTAATTA+AGG + Chr3:55687634-55687653 MsG0380014498.01.T01:intron 20.0%
!!! GTATTTTGAGGATATTTTTT+AGG - Chr3:55688583-55688602 None:intergenic 20.0%
!!! GTTGTGATATTTTTTCTATT+TGG + Chr3:55686329-55686348 MsG0380014498.01.T01:intron 20.0%
!!! TAAGTTTTGCTAAAATCTTT+GGG - Chr3:55687871-55687890 None:intergenic 20.0%
!!! TATTAATTGGTTTGGATATT+CGG - Chr3:55688436-55688455 None:intergenic 20.0%
!!! TGAAATAGATAAAGGTTTTA+GGG + Chr3:55686360-55686379 MsG0380014498.01.T01:intron 20.0%
!!! TGTTTATGTAAGATTTTCTT+TGG - Chr3:55686996-55687015 None:intergenic 20.0%
!!! TTAAGTTTTGCTAAAATCTT+TGG - Chr3:55687872-55687891 None:intergenic 20.0%
!!! TTATTTGATTTAGTCTGTTT+TGG - Chr3:55686600-55686619 None:intergenic 20.0%
!!! TTTAAAATATTTCGTCATGA+TGG - Chr3:55683858-55683877 None:intergenic 20.0%
!!! TTTTATAATTTTAACACCTC+CGG + Chr3:55688513-55688532 MsG0380014498.01.T01:intron 20.0%
!!! TTTTGAAAAGGATGATAAAA+TGG + Chr3:55688084-55688103 MsG0380014498.01.T01:CDS 20.0%
!!! TTTTGCTAATTGTTTGTTAT+GGG + Chr3:55684387-55684406 MsG0380014498.01.T01:intron 20.0%
!!! TTTTTAAAACGTTATGCATT+TGG + Chr3:55684178-55684197 MsG0380014498.01.T01:intron 20.0%
!!! TTTTTGTTTATAATAGTGAC+CGG + Chr3:55682133-55682152 MsG0380014498.01.T01:intron 20.0%
!!! TTTTTTCATAGAAGATTTCA+AGG + Chr3:55686397-55686416 MsG0380014498.01.T01:intron 20.0%
! AAAATAAGGGAATTTATTGG+TGG + Chr3:55684608-55684627 MsG0380014498.01.T01:intron 25.0%
! AAATGATGTGGCATATAAAA+TGG + Chr3:55688215-55688234 MsG0380014498.01.T01:CDS 25.0%
! AAATTGTCATGCATAAATGT+TGG - Chr3:55686097-55686116 None:intergenic 25.0%
! AACTCTTGAACATATTTATG+GGG + Chr3:55687237-55687256 MsG0380014498.01.T01:CDS 25.0%
! AATGGTTGTAAAACAATCAA+TGG - Chr3:55687598-55687617 None:intergenic 25.0%
! ACAAAAATATCTATGTAAGG+AGG + Chr3:55683934-55683953 MsG0380014498.01.T01:intron 25.0%
! AGTGGAGATTAAAATGTTTA+AGG - Chr3:55683779-55683798 None:intergenic 25.0%
! ATAACAAAAATGAAACTTGC+AGG + Chr3:55687818-55687837 MsG0380014498.01.T01:intron 25.0%
! ATAATGCTCAAATAAGCTAA+TGG + Chr3:55682920-55682939 MsG0380014498.01.T01:intron 25.0%
! ATATAAACACTTACTAGTTG+GGG + Chr3:55685973-55685992 MsG0380014498.01.T01:intron 25.0%
! ATGATTAAAATGCTTCAATG+CGG + Chr3:55686439-55686458 MsG0380014498.01.T01:intron 25.0%
! ATGGGTCAAAGAATATTAAT+TGG - Chr3:55688449-55688468 None:intergenic 25.0%
! ATTCTAATTTCTCCAAAACA+TGG + Chr3:55685322-55685341 MsG0380014498.01.T01:intron 25.0%
! ATTGTCATTCAAAACAAACT+TGG + Chr3:55683346-55683365 MsG0380014498.01.T01:CDS 25.0%
! CAAATAAGCTAATAACCTTA+GGG + Chr3:55682978-55682997 MsG0380014498.01.T01:intron 25.0%
! CAACTCTTGAACATATTTAT+GGG + Chr3:55687236-55687255 MsG0380014498.01.T01:CDS 25.0%
! CATTCATTAAATAAGGTATG+TGG - Chr3:55682098-55682117 None:intergenic 25.0%
! CCATAAAACAATAACAATCA+AGG - Chr3:55687146-55687165 None:intergenic 25.0%
! CCCTTAAAATATTAAAACGA+CGG - Chr3:55684060-55684079 None:intergenic 25.0%
! CTATCGACAAATAGAATTAT+TGG - Chr3:55683975-55683994 None:intergenic 25.0%
! GAAAGATTTAATTCACATAC+CGG - Chr3:55686297-55686316 None:intergenic 25.0%
! GAAGAATCATATATTATCGA+AGG + Chr3:55685463-55685482 MsG0380014498.01.T01:intron 25.0%
! GAATTCATGAATTTCTATGT+CGG + Chr3:55682213-55682232 MsG0380014498.01.T01:intron 25.0%
! GATATACATTAGAAGGAAAT+TGG + Chr3:55681497-55681516 MsG0380014498.01.T01:CDS 25.0%
! GTAACACTAAATTATAGAAG+TGG - Chr3:55684673-55684692 None:intergenic 25.0%
! GTTTCTTAATTGGATATATC+CGG + Chr3:55685741-55685760 MsG0380014498.01.T01:intron 25.0%
! TAACCTTAGGGAATTAAAAA+AGG + Chr3:55682990-55683009 MsG0380014498.01.T01:intron 25.0%
! TATGATTACAACCCAAATAA+AGG + Chr3:55687356-55687375 MsG0380014498.01.T01:CDS 25.0%
! TATGTATATTGCAACAGATT+TGG + Chr3:55683291-55683310 MsG0380014498.01.T01:intron 25.0%
! TCAAATAAGCTAATAACCTT+AGG + Chr3:55682977-55682996 MsG0380014498.01.T01:intron 25.0%
! TCAACTCTTGAACATATTTA+TGG + Chr3:55687235-55687254 MsG0380014498.01.T01:CDS 25.0%
! TTTGCAGGATGTAAAAATAT+GGG + Chr3:55686826-55686845 MsG0380014498.01.T01:intron 25.0%
! TTTGGTCAATAAGAAAGAAA+TGG - Chr3:55689557-55689576 None:intergenic 25.0%
!! AAGGTATATGATCATTTTAG+TGG + Chr3:55687375-55687394 MsG0380014498.01.T01:intron 25.0%
!! AATTGAAACCATTTGGAATT+TGG + Chr3:55686621-55686640 MsG0380014498.01.T01:intron 25.0%
!! ATATTTGATGATCTAATCCA+AGG + Chr3:55688109-55688128 MsG0380014498.01.T01:CDS 25.0%
!! ATGAAGTGTCCTTAATTAAA+AGG - Chr3:55687646-55687665 None:intergenic 25.0%
!! ATTCTTATTTACCTGAAGTT+TGG + Chr3:55683610-55683629 MsG0380014498.01.T01:intron 25.0%
!! CATTTCGATTTGATCATAAT+AGG + Chr3:55687461-55687480 MsG0380014498.01.T01:intron 25.0%
!! CTGAAATAGATAAAGGTTTT+AGG + Chr3:55686359-55686378 MsG0380014498.01.T01:intron 25.0%
!! GTGTTCAAAATTTGCTTAAA+GGG + Chr3:55687168-55687187 MsG0380014498.01.T01:intron 25.0%
!! TGTGTTCAAAATTTGCTTAA+AGG + Chr3:55687167-55687186 MsG0380014498.01.T01:intron 25.0%
!! TGTTCAAAATTTGCTTAAAG+GGG + Chr3:55687169-55687188 MsG0380014498.01.T01:intron 25.0%
!! TTCTTTGGACATAATTTTTG+TGG - Chr3:55686227-55686246 None:intergenic 25.0%
!! TTTTGAATGACAATAAGATC+AGG - Chr3:55683340-55683359 None:intergenic 25.0%
!! TTTTGCAGGATGTAAAAATA+TGG + Chr3:55686825-55686844 MsG0380014498.01.T01:intron 25.0%
!!! AAATTAAGCTATGTTTTTGC+AGG + Chr3:55686811-55686830 MsG0380014498.01.T01:intron 25.0%
!!! AACACGTTTTGTTTCTTAAT+TGG + Chr3:55685731-55685750 MsG0380014498.01.T01:intron 25.0%
!!! ACCGTCGTTTTAATATTTTA+AGG + Chr3:55684056-55684075 MsG0380014498.01.T01:intron 25.0%
!!! ACTTTTGATTAATGTGAAGT+TGG + Chr3:55684353-55684372 MsG0380014498.01.T01:intron 25.0%
!!! ATAATTTTAAGGAGAAATGG+TGG - Chr3:55685381-55685400 None:intergenic 25.0%
!!! ATGTTTTGGAGAAATTAGAA+TGG - Chr3:55685323-55685342 None:intergenic 25.0%
!!! ATTAAGGAAACGTTTTGAAA+AGG + Chr3:55688072-55688091 MsG0380014498.01.T01:CDS 25.0%
!!! CATATCAATTCTGAAATCTT+TGG - Chr3:55689460-55689479 None:intergenic 25.0%
!!! CATGACGAAATATTTTAAAG+TGG + Chr3:55683859-55683878 MsG0380014498.01.T01:intron 25.0%
!!! CCGTCGTTTTAATATTTTAA+GGG + Chr3:55684057-55684076 MsG0380014498.01.T01:intron 25.0%
!!! CCTTGATTGTTATTGTTTTA+TGG + Chr3:55687143-55687162 MsG0380014498.01.T01:intron 25.0%
!!! CTTTTTGATTCTCAAAATGA+GGG - Chr3:55686723-55686742 None:intergenic 25.0%
!!! GAAACTTGTTAAAAACAAGT+CGG + Chr3:55685566-55685585 MsG0380014498.01.T01:intron 25.0%
!!! GATATTTTTTCTATTTGGCT+AGG + Chr3:55686334-55686353 MsG0380014498.01.T01:intron 25.0%
!!! GATTGTTTTACAACCATTTT+TGG + Chr3:55687600-55687619 MsG0380014498.01.T01:intron 25.0%
!!! TGATGACTTAAAGTTTTTAG+TGG - Chr3:55682517-55682536 None:intergenic 25.0%
!!! TTTCCTTTTTTAATTCCCTA+AGG - Chr3:55682996-55683015 None:intergenic 25.0%
!!! TTTTAAATGTCGTTTGACTA+AGG + Chr3:55684015-55684034 MsG0380014498.01.T01:intron 25.0%
AAACAAAACGTGTTTGCTTA+AGG - Chr3:55685725-55685744 None:intergenic 30.0%
AAACGATAGTTAACTACCAT+CGG + Chr3:55688845-55688864 MsG0380014498.01.T01:intron 30.0%
AAAGATCTTATTCGAAGCAA+TGG + Chr3:55681922-55681941 MsG0380014498.01.T01:CDS 30.0%
AAAGCATATCCAGAAATTTC+CGG - Chr3:55685763-55685782 None:intergenic 30.0%
AAATGGCATAGTTGAAATAG+TGG + Chr3:55687943-55687962 MsG0380014498.01.T01:CDS 30.0%
AACGTAAATCCTCCAAAAAA+AGG - Chr3:55687266-55687285 None:intergenic 30.0%
AAGATCTTATTCGAAGCAAT+GGG + Chr3:55681923-55681942 MsG0380014498.01.T01:CDS 30.0%
AATTACCAAAAAGTTCTCTC+CGG - Chr3:55681972-55681991 None:intergenic 30.0%
ACTCTTGAACATATTTATGG+GGG + Chr3:55687238-55687257 MsG0380014498.01.T01:CDS 30.0%
AGAATTACACCCTCAAAATA+TGG + Chr3:55685173-55685192 MsG0380014498.01.T01:intron 30.0%
ATCTCTATTGTGCTAAACTT+AGG - Chr3:55681553-55681572 None:intergenic 30.0%
ATCTTACATAAACACAACCT+CGG + Chr3:55687002-55687021 MsG0380014498.01.T01:intron 30.0%
ATGTAAAAATATGGGAGAGA+AGG + Chr3:55686834-55686853 MsG0380014498.01.T01:CDS 30.0%
ATTTCAGAATTGATATGCCA+AGG + Chr3:55689463-55689482 MsG0380014498.01.T01:CDS 30.0%
ATTTCTCCAAAACATGGATA+TGG + Chr3:55685328-55685347 MsG0380014498.01.T01:intron 30.0%
CAAAATTAAGGCTACAACTA+TGG - Chr3:55684298-55684317 None:intergenic 30.0%
CAATGTTTCTTAGAAACACA+TGG - Chr3:55688927-55688946 None:intergenic 30.0%
CGAAACCGTTCAAATTAATA+TGG + Chr3:55685245-55685264 MsG0380014498.01.T01:intron 30.0%
CTAAAGGGATATACATTAGA+AGG + Chr3:55681490-55681509 MsG0380014498.01.T01:CDS 30.0%
CTAAGAAGATCAATGTAAAG+TGG - Chr3:55689654-55689673 None:intergenic 30.0%
CTATGAAAAAACTAGTGTGT+AGG - Chr3:55686032-55686051 None:intergenic 30.0%
CTCTCATAACAAACAATTGT+TGG - Chr3:55684542-55684561 None:intergenic 30.0%
CTGAAATGTGTTTGCAATTT+AGG + Chr3:55688394-55688413 MsG0380014498.01.T01:intron 30.0%
CTTAACTCACAAAAATGTGA+AGG + Chr3:55681654-55681673 MsG0380014498.01.T01:CDS 30.0%
GACAATCATTTCAACTTTCA+AGG - Chr3:55689023-55689042 None:intergenic 30.0%
GAGAAGAAATTCATTGTCTT+CGG + Chr3:55683510-55683529 MsG0380014498.01.T01:intron 30.0%
GATGTCAAAAAAGCAATTCT+CGG + Chr3:55688947-55688966 MsG0380014498.01.T01:intron 30.0%
GTGTTTGATCATGTTATAGA+AGG - Chr3:55682652-55682671 None:intergenic 30.0%
TAAAAATGTCCCACATTGAA+GGG - Chr3:55686002-55686021 None:intergenic 30.0%
TAATGTTTCCTAGAAACACA+TGG + Chr3:55688807-55688826 MsG0380014498.01.T01:intron 30.0%
TATCTCATCAAGTTTAAACC+AGG + Chr3:55681865-55681884 MsG0380014498.01.T01:CDS 30.0%
TCACTTAAGTTCTCCAAAAA+TGG - Chr3:55687616-55687635 None:intergenic 30.0%
TGTTATGACACACTATCAAA+AGG + Chr3:55686134-55686153 MsG0380014498.01.T01:intron 30.0%
TTAAAAATGTCCCACATTGA+AGG - Chr3:55686003-55686022 None:intergenic 30.0%
TTACAAACTCTCCCTATAAA+AGG - Chr3:55685666-55685685 None:intergenic 30.0%
TTATTTACCTGAAGTTTGGT+TGG + Chr3:55683614-55683633 MsG0380014498.01.T01:intron 30.0%
TTTCTTTAACTAGTGCTCTA+AGG + Chr3:55683238-55683257 MsG0380014498.01.T01:intron 30.0%
TTTGATCATGTTATAGAAGG+TGG - Chr3:55682649-55682668 None:intergenic 30.0%
TTTGCTTTGTCTTCAGTAAT+TGG + Chr3:55689372-55689391 MsG0380014498.01.T01:CDS 30.0%
! ACACAATGTGCTTGTATTTT+TGG - Chr3:55689575-55689594 None:intergenic 30.0%
! CATGTGTTTCTAAGAAACAT+TGG + Chr3:55688925-55688944 MsG0380014498.01.T01:intron 30.0%
! CGTCTCTTGTATTTTACAAT+GGG - Chr3:55688467-55688486 None:intergenic 30.0%
! GATTGCTTCTTCAACTTTTA+GGG - Chr3:55686174-55686193 None:intergenic 30.0%
! GTCTTATCCTTCTGATTTTT+GGG - Chr3:55687762-55687781 None:intergenic 30.0%
! TAAAAGTTGAATATGATGGG+AGG + Chr3:55682399-55682418 MsG0380014498.01.T01:intron 30.0%
! TAAACGTGAGAAAGCAATTT+TGG + Chr3:55687889-55687908 MsG0380014498.01.T01:CDS 30.0%
! TCGTCTCTTGTATTTTACAA+TGG - Chr3:55688468-55688487 None:intergenic 30.0%
! TCTTATCCTTCTGATTTTTG+GGG - Chr3:55687761-55687780 None:intergenic 30.0%
! TGTCTTATCCTTCTGATTTT+TGG - Chr3:55687763-55687782 None:intergenic 30.0%
! TTCGGTGTAAAGAATCAAAT+GGG + Chr3:55685632-55685651 MsG0380014498.01.T01:intron 30.0%
! TTGATTTTCTTATTCACACC+CGG - Chr3:55688703-55688722 None:intergenic 30.0%
! TTTCGGTGTAAAGAATCAAA+TGG + Chr3:55685631-55685650 MsG0380014498.01.T01:intron 30.0%
!! ATGGTTTGTTTAACAACCTT+AGG + Chr3:55682939-55682958 MsG0380014498.01.T01:intron 30.0%
!! ATTTATTGGTGGATTAAACG+AGG + Chr3:55684619-55684638 MsG0380014498.01.T01:intron 30.0%
!! CCTCATTTTGAGAATCAAAA+AGG + Chr3:55686721-55686740 MsG0380014498.01.T01:intron 30.0%
!! CCTTTTTGATTCTCAAAATG+AGG - Chr3:55686724-55686743 None:intergenic 30.0%
!! GAAATTTCTGGATATGCTTT+TGG + Chr3:55685763-55685782 MsG0380014498.01.T01:intron 30.0%
!! GATTTTTCGAAATCCAAGAT+AGG - Chr3:55686578-55686597 None:intergenic 30.0%
!! TACTGATTTATAAGCGATGT+GGG + Chr3:55682571-55682590 MsG0380014498.01.T01:intron 30.0%
!! TGGTTTGTTTAACAACCTTA+GGG + Chr3:55682940-55682959 MsG0380014498.01.T01:intron 30.0%
!! TTACTGATTTATAAGCGATG+TGG + Chr3:55682570-55682589 MsG0380014498.01.T01:intron 30.0%
!! TTTATTGGTGGATTAAACGA+GGG + Chr3:55684620-55684639 MsG0380014498.01.T01:intron 30.0%
!! TTTTGGAGAAATTAGAATGG+TGG - Chr3:55685320-55685339 None:intergenic 30.0%
!!! AGTCAATGATTGTTTTAGTC+AGG - Chr3:55687691-55687710 None:intergenic 30.0%
!!! GCTCAAATATTTTTTATCCG+AGG - Chr3:55687022-55687041 None:intergenic 30.0%
!!! GTTAACTATCGTTTGGTTTT+TGG - Chr3:55688839-55688858 None:intergenic 30.0%
!!! GTTTTCTAGTTATAAGCTAG+CGG + Chr3:55688867-55688886 MsG0380014498.01.T01:intron 30.0%
AAAACTATGCCACATGTCTT+TGG + Chr3:55686893-55686912 MsG0380014498.01.T01:CDS 35.0%
AAAGCAAATGCATCAAATGC+AGG - Chr3:55689360-55689379 None:intergenic 35.0%
AAAGCAAGCTTCTTCATGAT+CGG - Chr3:55688778-55688797 None:intergenic 35.0%
AAAGCGGATACAAGATGATA+TGG + Chr3:55683413-55683432 MsG0380014498.01.T01:CDS 35.0%
AAATGTGGAGAATATGCAAC+CGG + Chr3:55686275-55686294 MsG0380014498.01.T01:CDS 35.0%
AACAAAGATGACAAAACAGC+TGG + Chr3:55689156-55689175 MsG0380014498.01.T01:CDS 35.0%
AAGAACACTCTTAATACCGA+AGG + Chr3:55685520-55685539 MsG0380014498.01.T01:intron 35.0%
AAGTAGTATTGCATGAAGAG+CGG + Chr3:55684776-55684795 MsG0380014498.01.T01:intron 35.0%
AATCCCAAAAGAAGTTTCCT+TGG - Chr3:55689483-55689502 None:intergenic 35.0%
AATCCTTATGAATCGTACCT+GGG + Chr3:55687287-55687306 MsG0380014498.01.T01:CDS 35.0%
AATCTATGTCACATAGTGTG+AGG + Chr3:55684256-55684275 MsG0380014498.01.T01:intron 35.0%
ACATAGTGTGAGGTTAGTAT+TGG + Chr3:55684266-55684285 MsG0380014498.01.T01:intron 35.0%
ACTCAACCTAGTAACAACTT+CGG - Chr3:55685010-55685029 None:intergenic 35.0%
AGAACACTCTTAATACCGAA+GGG + Chr3:55685521-55685540 MsG0380014498.01.T01:intron 35.0%
AGATCTTATTCGAAGCAATG+GGG + Chr3:55681924-55681943 MsG0380014498.01.T01:CDS 35.0%
AGATTGATCTCCGTATTACT+AGG + Chr3:55687726-55687745 MsG0380014498.01.T01:intron 35.0%
AGCAAGTGACTGAATAAATG+AGG - Chr3:55689599-55689618 None:intergenic 35.0%
AGCACTTTCTAAATTCCCTA+AGG - Chr3:55682958-55682977 None:intergenic 35.0%
AGTAAGTGGTATTAGAGTCT+TGG - Chr3:55682696-55682715 None:intergenic 35.0%
ATAGAGATCAGCAAAAGTAG+AGG + Chr3:55681565-55681584 MsG0380014498.01.T01:CDS 35.0%
ATTGAACATCTGACCTATCT+TGG + Chr3:55686562-55686581 MsG0380014498.01.T01:intron 35.0%
CAACAACAAACCAATGCTTT+AGG + Chr3:55682464-55682483 MsG0380014498.01.T01:intron 35.0%
CAACAACGTATCAATGTTTC+AGG + Chr3:55682739-55682758 MsG0380014498.01.T01:intron 35.0%
CAAGAAATCACATGAAACAC+TGG + Chr3:55689188-55689207 MsG0380014498.01.T01:CDS 35.0%
CACATGGATCAGTATACTAA+AGG + Chr3:55689102-55689121 MsG0380014498.01.T01:intron 35.0%
CATGAAACACTGGTAACAAA+AGG + Chr3:55689198-55689217 MsG0380014498.01.T01:CDS 35.0%
CATGCTAATTAGTGTCTCTT+GGG + Chr3:55683098-55683117 MsG0380014498.01.T01:intron 35.0%
CATTTCAGTCACAATATCAG+TGG - Chr3:55688382-55688401 None:intergenic 35.0%
CTATTGCATACAAAGTCACA+GGG - Chr3:55689623-55689642 None:intergenic 35.0%
CTTCAAAAACCAAAGACATG+TGG - Chr3:55686905-55686924 None:intergenic 35.0%
CTTCGGTAGATGATAGAATT+TGG - Chr3:55684993-55685012 None:intergenic 35.0%
CTTGTTAAAAACAAGTCGGA+GGG + Chr3:55685570-55685589 MsG0380014498.01.T01:intron 35.0%
GACACTTCATTTAGTAGAAC+TGG + Chr3:55687656-55687675 MsG0380014498.01.T01:intron 35.0%
GACTATGAACTTAAGACCAA+GGG + Chr3:55685486-55685505 MsG0380014498.01.T01:intron 35.0%
GAGATCAATCTGGAGATAAT+TGG - Chr3:55687717-55687736 None:intergenic 35.0%
GATGGTAGTTAACTATCGTT+TGG - Chr3:55688846-55688865 None:intergenic 35.0%
GCTTATAACTAGAAAACCGA+TGG - Chr3:55688864-55688883 None:intergenic 35.0%
GTAACAAAAAACGAGTGACT+GGG + Chr3:55685682-55685701 MsG0380014498.01.T01:intron 35.0%
GTCATTGATAGAATCTCTCT+GGG + Chr3:55689040-55689059 MsG0380014498.01.T01:intron 35.0%
GTGGCATATAAAATGGTTTC+AGG + Chr3:55688222-55688241 MsG0380014498.01.T01:CDS 35.0%
GTGTGCAAAAGTAGTTAGAA+GGG - Chr3:55689085-55689104 None:intergenic 35.0%
GTTGCATACATCTTTACCTT+TGG + Chr3:55686925-55686944 MsG0380014498.01.T01:CDS 35.0%
GTTGGATATCGATACTCTAT+TGG + Chr3:55683632-55683651 MsG0380014498.01.T01:intron 35.0%
GTTTGAGTCCAAATTCCAAA+TGG - Chr3:55686632-55686651 None:intergenic 35.0%
TAAAATACAAGAGACGACTC+CGG + Chr3:55688471-55688490 MsG0380014498.01.T01:intron 35.0%
TAACAAAAAACGAGTGACTG+GGG + Chr3:55685683-55685702 MsG0380014498.01.T01:intron 35.0%
TAACATGTGTCGTAGTTCTT+TGG - Chr3:55686242-55686261 None:intergenic 35.0%
TAGTAATACGGAGATCAATC+TGG - Chr3:55687727-55687746 None:intergenic 35.0%
TATATGCCACATCATTTGCA+AGG - Chr3:55688212-55688231 None:intergenic 35.0%
TCAGCCAAATGAGATATTGA+GGG + Chr3:55688557-55688576 MsG0380014498.01.T01:intron 35.0%
TCATCAAGTTTAAACCAGGT+AGG + Chr3:55681869-55681888 MsG0380014498.01.T01:CDS 35.0%
TCATGCTAATTAGTGTCTCT+TGG + Chr3:55683097-55683116 MsG0380014498.01.T01:intron 35.0%
TGCATGGAAATGAGTGTTAA+GGG + Chr3:55682339-55682358 MsG0380014498.01.T01:intron 35.0%
TGGATATATCCGGAAATTTC+TGG + Chr3:55685751-55685770 MsG0380014498.01.T01:intron 35.0%
TGGTAACAAAAGGTAGTGAA+TGG + Chr3:55689208-55689227 MsG0380014498.01.T01:CDS 35.0%
TGTAACAAAAAACGAGTGAC+TGG + Chr3:55685681-55685700 MsG0380014498.01.T01:intron 35.0%
TGTCATTGATAGAATCTCTC+TGG + Chr3:55689039-55689058 MsG0380014498.01.T01:intron 35.0%
TGTGAATGTATCATAGGAGA+AGG + Chr3:55681748-55681767 MsG0380014498.01.T01:CDS 35.0%
TGTGTGCAAAAGTAGTTAGA+AGG - Chr3:55689086-55689105 None:intergenic 35.0%
TGTTTATAATAGTGACCGGA+GGG + Chr3:55682137-55682156 MsG0380014498.01.T01:intron 35.0%
TTAAGGTCGTATATGGAACT+TGG - Chr3:55687989-55688008 None:intergenic 35.0%
TTAATCGAACAGTTGTAGCT+GGG - Chr3:55685127-55685146 None:intergenic 35.0%
TTCAGCCAAATGAGATATTG+AGG + Chr3:55688556-55688575 MsG0380014498.01.T01:intron 35.0%
TTCATTGTCTTCGGAACATA+TGG + Chr3:55683519-55683538 MsG0380014498.01.T01:intron 35.0%
TTCCAAGTTAAGGTCGTATA+TGG - Chr3:55687996-55688015 None:intergenic 35.0%
TTCCATATACGACCTTAACT+TGG + Chr3:55687991-55688010 MsG0380014498.01.T01:CDS 35.0%
TTCTTAAGATCATAGTCCCT+TGG - Chr3:55685505-55685524 None:intergenic 35.0%
TTGCATGGAAATGAGTGTTA+AGG + Chr3:55682338-55682357 MsG0380014498.01.T01:intron 35.0%
TTGCTTTCTTGTGAGGAAAT+TGG - Chr3:55686656-55686675 None:intergenic 35.0%
TTGTTTATAATAGTGACCGG+AGG + Chr3:55682136-55682155 MsG0380014498.01.T01:intron 35.0%
TTTCTTTCTTATCCACACCT+TGG - Chr3:55688129-55688148 None:intergenic 35.0%
TTTGGATAACGAGATCAACT+AGG - Chr3:55686978-55686997 None:intergenic 35.0%
! AACGATTGAGCCATATTTTG+AGG - Chr3:55685186-55685205 None:intergenic 35.0%
! ACTATCAAAAGGTATACCTG+CGG + Chr3:55686145-55686164 MsG0380014498.01.T01:intron 35.0%
! ACTTGTTAAAAACAAGTCGG+AGG + Chr3:55685569-55685588 MsG0380014498.01.T01:intron 35.0%
! AGATGAAGCAAAAGCACAAA+TGG + Chr3:55687207-55687226 MsG0380014498.01.T01:CDS 35.0%
! ATGCCAAGGAAACTTCTTTT+GGG + Chr3:55689477-55689496 MsG0380014498.01.T01:CDS 35.0%
! CATCGAATTTTAAACTGCGA+CGG - Chr3:55688273-55688292 None:intergenic 35.0%
! CGATTGCTTCTTCAACTTTT+AGG - Chr3:55686175-55686194 None:intergenic 35.0%
! CTAGGGTCTGAAATAGATAA+AGG + Chr3:55686352-55686371 MsG0380014498.01.T01:intron 35.0%
! GGATTAAACGAGGGTATAAT+AGG + Chr3:55684629-55684648 MsG0380014498.01.T01:intron 35.0%
! TATGCCAAGGAAACTTCTTT+TGG + Chr3:55689476-55689495 MsG0380014498.01.T01:CDS 35.0%
! TGATGAAAATGATGACGATG+AGG + Chr3:55687844-55687863 MsG0380014498.01.T01:CDS 35.0%
! TGTTGTGTTTCAAGTGTGAA+CGG - Chr3:55682603-55682622 None:intergenic 35.0%
! TTCTGGATATGCTTTTGGAT+CGG + Chr3:55685768-55685787 MsG0380014498.01.T01:intron 35.0%
!! ACGATTGAGCCATATTTTGA+GGG - Chr3:55685185-55685204 None:intergenic 35.0%
!! ATTGGTTTGGATATTCGGTT+TGG - Chr3:55688431-55688450 None:intergenic 35.0%
!! ATTTTCTCTAAGGAGAGACA+TGG + Chr3:55686686-55686705 MsG0380014498.01.T01:intron 35.0%
!! CTTATCCTTCTGATTTTTGG+GGG - Chr3:55687760-55687779 None:intergenic 35.0%
!! TACTATGTTGCTTTCTTGTG+AGG - Chr3:55686663-55686682 None:intergenic 35.0%
!! TCTAACTACTTTTGCACACA+TGG + Chr3:55689086-55689105 MsG0380014498.01.T01:intron 35.0%
!! TTCTTTTCGAGAAGTGAGTA+TGG - Chr3:55689436-55689455 None:intergenic 35.0%
!! TTTTGTATTCGGTGATTGCT+TGG + Chr3:55682185-55682204 MsG0380014498.01.T01:intron 35.0%
!!! AAGCATCGACTGTGAATTTT+CGG + Chr3:55685614-55685633 MsG0380014498.01.T01:intron 35.0%
!!! ATTTTGACTGCAGCAAGAAA+TGG + Chr3:55687926-55687945 MsG0380014498.01.T01:CDS 35.0%
!!! CACATGTCTTTGGTTTTTGA+AGG + Chr3:55686903-55686922 MsG0380014498.01.T01:CDS 35.0%
!!! TTTATGGGGGATCCTTTTTT+TGG + Chr3:55687251-55687270 MsG0380014498.01.T01:CDS 35.0%
AACTGCAGTTGACTACAGTT+GGG - Chr3:55688634-55688653 None:intergenic 40.0%
AACTGTAGTCAACTGCAGTT+GGG + Chr3:55688634-55688653 MsG0380014498.01.T01:intron 40.0%
AAGCAAGCTTCTTCATGATC+GGG - Chr3:55688777-55688796 None:intergenic 40.0%
AAGCAATTCTCGGTCATGAA+TGG + Chr3:55688957-55688976 MsG0380014498.01.T01:intron 40.0%
AATATGGGAGAGAAGGACAT+AGG + Chr3:55686841-55686860 MsG0380014498.01.T01:CDS 40.0%
AATGACCAAAAACACCCCAA+TGG - Chr3:55688903-55688922 None:intergenic 40.0%
ACCCCTAATGAAAAACGTCT+GGG - Chr3:55687118-55687137 None:intergenic 40.0%
AGCAATTCTCGGTCATGAAT+GGG + Chr3:55688958-55688977 MsG0380014498.01.T01:intron 40.0%
AGCGACGAACATTGCAATAA+TGG - Chr3:55689523-55689542 None:intergenic 40.0%
AGCGGTAGTTAACTACCATT+GGG + Chr3:55688885-55688904 MsG0380014498.01.T01:intron 40.0%
AGGTGGAAACTCACACTTAA+TGG - Chr3:55682632-55682651 None:intergenic 40.0%
AGTCTACCTTGCACAACTTT+GGG - Chr3:55685073-55685092 None:intergenic 40.0%
AGTGCCAAAGACAAGTGATA+AGG + Chr3:55689689-55689708 MsG0380014498.01.T01:CDS 40.0%
ATATGGGAGAGAAGGACATA+GGG + Chr3:55686842-55686861 MsG0380014498.01.T01:CDS 40.0%
ATCACTTGTCTTTGGCACTT+TGG - Chr3:55689688-55689707 None:intergenic 40.0%
ATGGGAAAAATGACCTCCAA+GGG - Chr3:55685953-55685972 None:intergenic 40.0%
CATCTACCGAAGTTGTTACT+AGG + Chr3:55685001-55685020 MsG0380014498.01.T01:intron 40.0%
CTACCAAAAGTGATCGAGAT+TGG + Chr3:55688170-55688189 MsG0380014498.01.T01:CDS 40.0%
CTCTTTCAGTCCTAAAGCAT+TGG - Chr3:55682477-55682496 None:intergenic 40.0%
GAATCCTTATGAATCGTACC+TGG + Chr3:55687286-55687305 MsG0380014498.01.T01:CDS 40.0%
GACAATGCAGCAAGAAACAA+AGG - Chr3:55681823-55681842 None:intergenic 40.0%
GACTCTAATACCACTTACTG+AGG + Chr3:55682697-55682716 MsG0380014498.01.T01:intron 40.0%
GATCGAGATTGGAACATATC+TGG + Chr3:55688181-55688200 MsG0380014498.01.T01:CDS 40.0%
GCAACTGACAAAGATAAGGA+AGG - Chr3:55684813-55684832 None:intergenic 40.0%
GCTATTGCATACAAAGTCAC+AGG - Chr3:55689624-55689643 None:intergenic 40.0%
GGAAGGAAGTCCTAGTAATA+CGG - Chr3:55687739-55687758 None:intergenic 40.0%
GGACTATGAACTTAAGACCA+AGG + Chr3:55685485-55685504 MsG0380014498.01.T01:intron 40.0%
GGTCATTTCCATGTGTTTCT+AGG - Chr3:55688935-55688916 None:intergenic 40.0%
GTCTCAGCACCATAATAGAA+TGG - Chr3:55685279-55685298 None:intergenic 40.0%
GTGCCAAAGACAAGTGATAA+GGG + Chr3:55689690-55689709 MsG0380014498.01.T01:CDS 40.0%
GTGGAAACACCATATTTGAG+TGG - Chr3:55685301-55685320 None:intergenic 40.0%
GTGGTATCACCATATTTGAG+TGG - Chr3:55685362-55685381 None:intergenic 40.0%
GTTAATCGAACAGTTGTAGC+TGG - Chr3:55685128-55685147 None:intergenic 40.0%
GTTCTAACTGTGAAATGCTC+TGG - Chr3:55689135-55689154 None:intergenic 40.0%
GTTCTCCCGTTCACAAAATT+GGG + Chr3:55685912-55685931 MsG0380014498.01.T01:intron 40.0%
TACTTGTAGCAGTTGAGAAC+AGG + Chr3:55688029-55688048 MsG0380014498.01.T01:CDS 40.0%
TAGCGGTAGTTAACTACCAT+TGG + Chr3:55688884-55688903 MsG0380014498.01.T01:intron 40.0%
TAGGCCCTCAATATCTCATT+TGG - Chr3:55688564-55688583 None:intergenic 40.0%
TAGTCTACCTTGCACAACTT+TGG - Chr3:55685074-55685093 None:intergenic 40.0%
TATGGGAAAAATGACCTCCA+AGG - Chr3:55685954-55685973 None:intergenic 40.0%
TCAACTTTCAAGGTGAGACT+AGG - Chr3:55689013-55689032 None:intergenic 40.0%
TCCTTATCTTTGTCAGTTGC+CGG + Chr3:55684813-55684832 MsG0380014498.01.T01:intron 40.0%
TCGATATCCAACCAAACTTC+AGG - Chr3:55683624-55683643 None:intergenic 40.0%
TGAGGTGACTCATATACTTG+AGG - Chr3:55682809-55682828 None:intergenic 40.0%
TGATGATCTAATCCAAGGTG+TGG + Chr3:55688114-55688133 MsG0380014498.01.T01:CDS 40.0%
TGCCAAAGACAAGTGATAAG+GGG + Chr3:55689691-55689710 MsG0380014498.01.T01:CDS 40.0%
TGTTTCTTGCTGCATTGTCT+TGG + Chr3:55681824-55681843 MsG0380014498.01.T01:CDS 40.0%
TTAATACCGAAGGGACAGAA+AGG + Chr3:55685530-55685549 MsG0380014498.01.T01:intron 40.0%
TTGAACGGTTTCGAATAGAG+CGG - Chr3:55685238-55685257 None:intergenic 40.0%
! AAGCAAAAGCACAAATGGAG+TGG + Chr3:55687212-55687231 MsG0380014498.01.T01:CDS 40.0%
! AGACATGTGGCATAGTTTTC+TGG - Chr3:55686892-55686911 None:intergenic 40.0%
! AGGAAATTGGGATCAAGTTG+CGG + Chr3:55681510-55681529 MsG0380014498.01.T01:CDS 40.0%
! ATCTTTACCTTTGGCCTTTC+AGG + Chr3:55686934-55686953 MsG0380014498.01.T01:CDS 40.0%
! CTATCAAAAGGTATACCTGC+GGG + Chr3:55686146-55686165 MsG0380014498.01.T01:intron 40.0%
! GAATATGATGGGAGGTGTAT+TGG + Chr3:55682407-55682426 MsG0380014498.01.T01:intron 40.0%
! GTAGTGCCATATCCATGTTT+TGG - Chr3:55685337-55685356 None:intergenic 40.0%
! GTTCCAATCTCGATCACTTT+TGG - Chr3:55688176-55688195 None:intergenic 40.0%
! TCTGGATATGCTTTTGGATC+GGG + Chr3:55685769-55685788 MsG0380014498.01.T01:intron 40.0%
!! AACTACCATTGGGGTGTTTT+TGG + Chr3:55688895-55688914 MsG0380014498.01.T01:intron 40.0%
!! CATCTTGTATCCGCTTTTGA+AGG - Chr3:55683410-55683429 None:intergenic 40.0%
!! TACTTGAGGCCTTGTGATTT+TGG - Chr3:55682795-55682814 None:intergenic 40.0%
AAACCAGGTAGGAGTGATTG+TGG + Chr3:55681880-55681899 MsG0380014498.01.T01:CDS 45.0%
AAAGACAAGTGATAAGGGGG+AGG + Chr3:55689695-55689714 MsG0380014498.01.T01:CDS 45.0%
ACACACACACACACACACTT+AGG - Chr3:55684844-55684863 None:intergenic 45.0%
ACCAAAAAGTTCTCTCCGGA+TGG - Chr3:55681968-55681987 None:intergenic 45.0%
ACCGTCTGAGAGTTATCTAC+CGG - Chr3:55688535-55688554 None:intergenic 45.0%
ACTGTAGTCAACTGCAGTTG+GGG + Chr3:55688635-55688654 MsG0380014498.01.T01:intron 45.0%
ATTCTCGGTCATGAATGGGT+TGG + Chr3:55688962-55688981 MsG0380014498.01.T01:intron 45.0%
CAACTGCAGTTGACTACAGT+TGG - Chr3:55688635-55688654 None:intergenic 45.0%
CAACTGTAGTCAACTGCAGT+TGG + Chr3:55688633-55688652 MsG0380014498.01.T01:intron 45.0%
CACAAAATTGGGTACCCCAA+GGG + Chr3:55685923-55685942 MsG0380014498.01.T01:intron 45.0%
CACACACACACACACACTTA+GGG - Chr3:55684843-55684862 None:intergenic 45.0%
CATTTGGACTCCTCAGTAAG+TGG - Chr3:55682710-55682729 None:intergenic 45.0%
CCTTAATGCCTCAACGACAT+TGG - Chr3:55688059-55688078 None:intergenic 45.0%
CGTTCTCCCGTTCACAAAAT+TGG + Chr3:55685911-55685930 MsG0380014498.01.T01:intron 45.0%
CTACACGTGGCAGTAAATGA+TGG + Chr3:55681595-55681614 MsG0380014498.01.T01:CDS 45.0%
CTCTCAAACTTCTTGCTACC+AGG + Chr3:55683377-55683396 MsG0380014498.01.T01:CDS 45.0%
CTGGTAGCAAGAAGTTTGAG+AGG - Chr3:55683379-55683398 None:intergenic 45.0%
CTTCAATCACAACTGCATCG+TGG - Chr3:55686465-55686484 None:intergenic 45.0%
CTTGATGCTGCAAGATGCAA+AGG - Chr3:55681712-55681731 None:intergenic 45.0%
GAAATGTTGCGCACTTACAG+TGG - Chr3:55683456-55683475 None:intergenic 45.0%
GAAGCAAAACATACACCCTC+CGG - Chr3:55682155-55682174 None:intergenic 45.0%
GACACTTACCAACTCCTGAA+AGG - Chr3:55686951-55686970 None:intergenic 45.0%
GACCCCTAATGAAAAACGTC+TGG - Chr3:55687119-55687138 None:intergenic 45.0%
GCACTACGACCACTCAAATA+TGG + Chr3:55685350-55685369 MsG0380014498.01.T01:intron 45.0%
GCCAAAGACAAGTGATAAGG+GGG + Chr3:55689692-55689711 MsG0380014498.01.T01:CDS 45.0%
GCGGATACAAGATGATATGG+TGG + Chr3:55683416-55683435 MsG0380014498.01.T01:CDS 45.0%
GCGGTAGTTAACTACCATTG+GGG + Chr3:55688886-55688905 MsG0380014498.01.T01:intron 45.0%
GGAGAAGAGAGGAAAAACAC+AGG + Chr3:55685591-55685610 MsG0380014498.01.T01:intron 45.0%
GGCAGTAAATGATGGCAATG+AGG + Chr3:55681603-55681622 MsG0380014498.01.T01:CDS 45.0%
GTATTCTTCACTGTGCCATC+CGG + Chr3:55681950-55681969 MsG0380014498.01.T01:CDS 45.0%
GTGCTGAGACCACTCAAATA+TGG + Chr3:55685289-55685308 MsG0380014498.01.T01:intron 45.0%
GTTCCCAGGTACGATTCATA+AGG - Chr3:55687293-55687312 None:intergenic 45.0%
GTTGTTGCTCTCGTGACATT+TGG - Chr3:55682726-55682745 None:intergenic 45.0%
TACAGTGCTTGATGTAGCGA+AGG - Chr3:55689289-55689308 None:intergenic 45.0%
TATGAATCGTACCTGGGAAC+CGG + Chr3:55687293-55687312 MsG0380014498.01.T01:CDS 45.0%
TCACAAAATTGGGTACCCCA+AGG + Chr3:55685922-55685941 MsG0380014498.01.T01:intron 45.0%
TCATAGGAGAAGGTCGTGAA+AGG + Chr3:55681758-55681777 MsG0380014498.01.T01:CDS 45.0%
TCCCCCTTATCACTTGTCTT+TGG - Chr3:55689696-55689715 None:intergenic 45.0%
TCCGGTAGATAACTCTCAGA+CGG + Chr3:55688531-55688550 MsG0380014498.01.T01:intron 45.0%
TCCTTCCCCCAAAAATCAGA+AGG + Chr3:55687752-55687771 MsG0380014498.01.T01:intron 45.0%
TCTACTCCTTTCTGTCCCTT+CGG - Chr3:55685539-55685558 None:intergenic 45.0%
TGAAACAGGTGAACCAGCAT+TGG + Chr3:55689326-55689345 MsG0380014498.01.T01:CDS 45.0%
TGATGTAGCGAAGGAAACAC+CGG - Chr3:55689280-55689299 None:intergenic 45.0%
TTCGAGAAGTGAGTATGGAC+AGG - Chr3:55689431-55689450 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG + Chr3:55685205-55685224 MsG0380014498.01.T01:intron 45.0%
TTGCATCTTGCAGCATCAAG+AGG + Chr3:55681712-55681731 MsG0380014498.01.T01:CDS 45.0%
TTTGTTACGCGTAGCGCTTA+CGG + Chr3:55685811-55685830 MsG0380014498.01.T01:intron 45.0%
! AATTGCATCGACCTCTGCAA+CGG - Chr3:55686513-55686532 None:intergenic 45.0%
! ACTCACATCTCCTGTTGGTT+TGG - Chr3:55687321-55687340 None:intergenic 45.0%
! AGTCTTGGTTCATTTTGCCG+AGG - Chr3:55682681-55682700 None:intergenic 45.0%
! CCAATGTCGTTGAGGCATTA+AGG + Chr3:55688056-55688075 MsG0380014498.01.T01:CDS 45.0%
! CGCCCAGACGTTTTTCATTA+GGG + Chr3:55687113-55687132 MsG0380014498.01.T01:intron 45.0%
! GATATGCTTTTGGATCGGGT+CGG + Chr3:55685773-55685792 MsG0380014498.01.T01:intron 45.0%
! GCCCAGACGTTTTTCATTAG+GGG + Chr3:55687114-55687133 MsG0380014498.01.T01:intron 45.0%
! GGGTACCCAATTTTGTGAAC+GGG - Chr3:55685920-55685939 None:intergenic 45.0%
! GTCTTGGTTCATTTTGCCGA+GGG - Chr3:55682680-55682699 None:intergenic 45.0%
! TCGCCCAGACGTTTTTCATT+AGG + Chr3:55687112-55687131 MsG0380014498.01.T01:intron 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG + Chr3:55685042-55685061 MsG0380014498.01.T01:intron 45.0%
!! GGGGTACCCAATTTTGTGAA+CGG - Chr3:55685921-55685940 None:intergenic 45.0%
!! GGGGTACTAGTGTATTTTCC+GGG + Chr3:55688682-55688701 MsG0380014498.01.T01:intron 45.0%
!! GGTCATGAATGGGTTGGATT+GGG + Chr3:55688968-55688987 MsG0380014498.01.T01:intron 45.0%
!! TATCCGCTTTTGAAGGCTGA+GGG - Chr3:55683403-55683422 None:intergenic 45.0%
!! TCCTTCTGATTTTTGGGGGA+AGG - Chr3:55687756-55687775 None:intergenic 45.0%
!! TTGAGGCCTTGTGATTTTGG+TGG - Chr3:55682792-55682811 None:intergenic 45.0%
!!! ATGGGGGATCCTTTTTTTGG+AGG + Chr3:55687254-55687273 MsG0380014498.01.T01:CDS 45.0%
!!! ATGTTCGTCGCTTTTTGCTC+TGG + Chr3:55689531-55689550 MsG0380014498.01.T01:CDS 45.0%
!!! GGGGGTACTAGTGTATTTTC+CGG + Chr3:55688681-55688700 MsG0380014498.01.T01:intron 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG - Chr3:55685112-55685131 None:intergenic 45.0%
!!! ATATTTAATTATTTACTTTT+TGG + Chr3:55682303-55682322 MsG0380014498.01.T01:intron 5.0%
!!! TAAATATTCATTTTTATTTT+AGG - Chr3:55682290-55682309 None:intergenic 5.0%
ACCAACTCCTGAAAGGCCAA+AGG - Chr3:55686944-55686963 None:intergenic 50.0%
ACGTCTTAAAGAGAGCGACC+TGG - Chr3:55685038-55685057 None:intergenic 50.0%
AGGAGAAGGTCGTGAAAGGA+AGG + Chr3:55681762-55681781 MsG0380014498.01.T01:CDS 50.0%
AGTGGCAGTTAACTGCAGCT+GGG + Chr3:55688661-55688680 MsG0380014498.01.T01:intron 50.0%
ATGGCAGTTAACTGCAGCTG+TGG - Chr3:55688606-55688625 None:intergenic 50.0%
CACACACACTTAGGGATTGC+CGG - Chr3:55684835-55684854 None:intergenic 50.0%
CAGGAGAACCAATGTCGTTG+AGG + Chr3:55688048-55688067 MsG0380014498.01.T01:CDS 50.0%
CCATCGCCACCAAAATCACA+AGG + Chr3:55682783-55682802 MsG0380014498.01.T01:intron 50.0%
CTGTAGTCAACTGCAGTTGG+GGG + Chr3:55688636-55688655 MsG0380014498.01.T01:intron 50.0%
GCACTACCCAAAGTTGTGCA+AGG + Chr3:55685064-55685083 MsG0380014498.01.T01:intron 50.0%
GCCGGCAACTGACAAAGATA+AGG - Chr3:55684817-55684836 None:intergenic 50.0%
GGAAGAAGCTTGCGTTCAGA+TGG - Chr3:55686871-55686890 None:intergenic 50.0%
GGAGAGACATGGATAGAACG+AGG + Chr3:55686697-55686716 MsG0380014498.01.T01:intron 50.0%
GTCTGAGAGTTATCTACCGG+AGG - Chr3:55688532-55688551 None:intergenic 50.0%
GTGCTGCCTTGCAAATGATG+TGG + Chr3:55688203-55688222 MsG0380014498.01.T01:CDS 50.0%
GTTCGACTCACATCTCCTGT+TGG - Chr3:55687326-55687345 None:intergenic 50.0%
TAGAGGAACAGCACTACACG+TGG + Chr3:55681582-55681601 MsG0380014498.01.T01:CDS 50.0%
TGACTACAGTTGGGAGCGAA+TGG - Chr3:55688625-55688644 None:intergenic 50.0%
TGGCAGTTAACTGCAGCTGT+GGG - Chr3:55688605-55688624 None:intergenic 50.0%
TTGGGGTGACCCTTCAATGT+GGG + Chr3:55685990-55686009 MsG0380014498.01.T01:intron 50.0%
! ACAGGTGAACCAGCATTGGA+AGG + Chr3:55689330-55689349 MsG0380014498.01.T01:CDS 50.0%
! ACATCAAGCACTGTACCAGG+CGG + Chr3:55689294-55689313 MsG0380014498.01.T01:CDS 50.0%
! ACCTTTGGCCTTTCAGGAGT+TGG + Chr3:55686940-55686959 MsG0380014498.01.T01:CDS 50.0%
! CTGCAGCTGTGGGTATTTTG+AGG - Chr3:55688595-55688614 None:intergenic 50.0%
! GCCATCCGGAGAGAACTTTT+TGG + Chr3:55681964-55681983 MsG0380014498.01.T01:CDS 50.0%
! GCTACATCAAGCACTGTACC+AGG + Chr3:55689291-55689310 MsG0380014498.01.T01:CDS 50.0%
! GGAGCGTCTTCATCTCTTGT+GGG - Chr3:55682765-55682784 None:intergenic 50.0%
! GGGCGAGCTCTCCTTTTATA+GGG + Chr3:55685652-55685671 MsG0380014498.01.T01:intron 50.0%
! TACTAGGTTGAGTCACGACC+AGG + Chr3:55685017-55685036 MsG0380014498.01.T01:intron 50.0%
! TGGAGCGTCTTCATCTCTTG+TGG - Chr3:55682766-55682785 None:intergenic 50.0%
! TGGGCGAGCTCTCCTTTTAT+AGG + Chr3:55685651-55685670 MsG0380014498.01.T01:intron 50.0%
!! CGGTCATGAATGGGTTGGAT+TGG + Chr3:55688967-55688986 MsG0380014498.01.T01:intron 50.0%
!! GTATCCGCTTTTGAAGGCTG+AGG - Chr3:55683404-55683423 None:intergenic 50.0%
!!! CCTTGTGATTTTGGTGGCGA+TGG - Chr3:55682786-55682805 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG - Chr3:55685109-55685128 None:intergenic 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG - Chr3:55685106-55685125 None:intergenic 50.0%
ACAAGTCGGAGGGAGAAGAG+AGG + Chr3:55685580-55685599 MsG0380014498.01.T01:intron 55.0%
ACGGCATCGCACTGCATTTG+CGG - Chr3:55686494-55686513 None:intergenic 55.0%
AGGCCCTCAGCCTTCAAAAG+CGG + Chr3:55683397-55683416 MsG0380014498.01.T01:CDS 55.0%
CCACCACAATCACTCCTACC+TGG - Chr3:55681886-55681905 None:intergenic 55.0%
CCAGGTAGGAGTGATTGTGG+TGG + Chr3:55681883-55681902 MsG0380014498.01.T01:CDS 55.0%
CGGTTACGTACCGTATCGAG+TGG - Chr3:55685218-55685237 None:intergenic 55.0%
GAGTGGCAGTTAACTGCAGC+TGG + Chr3:55688660-55688679 MsG0380014498.01.T01:intron 55.0%
GCAGGCTTTCCTTCCAATGC+TGG - Chr3:55689342-55689361 None:intergenic 55.0%
GGCGGCAACAGAAGTGAAAC+AGG + Chr3:55689312-55689331 MsG0380014498.01.T01:CDS 55.0%
GTAGTAGCAGCACTCCTTGC+CGG + Chr3:55689258-55689277 MsG0380014498.01.T01:CDS 55.0%
GTGGCAGTTAACTGCAGCTG+GGG + Chr3:55688662-55688681 MsG0380014498.01.T01:intron 55.0%
GTTGGGGTGACCCTTCAATG+TGG + Chr3:55685989-55686008 MsG0380014498.01.T01:intron 55.0%
GTTTCACTTCTGTTGCCGCC+TGG - Chr3:55689312-55689331 None:intergenic 55.0%
TAGCGAAGGAAACACCGGCA+AGG - Chr3:55689275-55689294 None:intergenic 55.0%
TGATCAAACACCCGCTCCCT+CGG + Chr3:55682661-55682680 MsG0380014498.01.T01:intron 55.0%
TGGCAGTTAACTGCAGCTGG+GGG + Chr3:55688663-55688682 MsG0380014498.01.T01:intron 55.0%
! GGTTCATTTTGCCGAGGGAG+CGG - Chr3:55682675-55682694 None:intergenic 55.0%
! GTTCATTTTGCCGAGGGAGC+GGG - Chr3:55682674-55682693 None:intergenic 55.0%
!! ATCTCCTGTTGGTTTGGCGC+CGG - Chr3:55687315-55687334 None:intergenic 55.0%
!!! TCAACTTTTAGGGCTCCCGC+AGG - Chr3:55686164-55686183 None:intergenic 55.0%
! ACCTCCAAGGGTGTGCCCTT+GGG - Chr3:55685941-55685960 None:intergenic 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG - Chr3:55685101-55685120 None:intergenic 60.0%
!! GCTTTTGAAGGCTGAGGGCC+TGG - Chr3:55683398-55683417 None:intergenic 60.0%
CAACTGCAGTTGGGGGCGAG+TGG + Chr3:55688643-55688662 MsG0380014498.01.T01:intron 65.0%
CTATCAACCACGCCGCCTCC+AGG + Chr3:55685091-55685110 MsG0380014498.01.T01:intron 65.0%
GCAGTGCGATGCCGTTGCAG+AGG + Chr3:55686499-55686518 MsG0380014498.01.T01:intron 65.0%
GGAACCGGCGCCAAACCAAC+AGG + Chr3:55687308-55687327 MsG0380014498.01.T01:CDS 65.0%
! CCTCCAAGGGTGTGCCCTTG+GGG - Chr3:55685940-55685959 None:intergenic 65.0%
! GACCTCCAAGGGTGTGCCCT+TGG - Chr3:55685942-55685961 None:intergenic 65.0%
! GTACCCCAAGGGCACACCCT+TGG + Chr3:55685934-55685953 MsG0380014498.01.T01:intron 65.0%
!! TTGGTTTGGCGCCGGTTCCC+AGG - Chr3:55687307-55687326 None:intergenic 65.0%
! CCCCAAGGGCACACCCTTGG+AGG + Chr3:55685937-55685956 MsG0380014498.01.T01:intron 70.0%
GGTGCGAGCGTGCGTGCGTG+TGG + Chr3:55682428-55682447 MsG0380014498.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 55681487 55689725 55681487 ID=MsG0380014498.01;Name=MsG0380014498.01
Chr3 mRNA 55681487 55689725 55681487 ID=MsG0380014498.01.T01;Parent=MsG0380014498.01;Name=MsG0380014498.01.T01;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|7|0|707
Chr3 exon 55681487 55681985 55681487 ID=MsG0380014498.01.T01:exon:23823;Parent=MsG0380014498.01.T01
Chr3 exon 55683308 55683457 55683308 ID=MsG0380014498.01.T01:exon:23824;Parent=MsG0380014498.01.T01
Chr3 exon 55686156 55686296 55686156 ID=MsG0380014498.01.T01:exon:23825;Parent=MsG0380014498.01.T01
Chr3 exon 55686833 55686961 55686833 ID=MsG0380014498.01.T01:exon:23826;Parent=MsG0380014498.01.T01
Chr3 exon 55687189 55687377 55687189 ID=MsG0380014498.01.T01:exon:23827;Parent=MsG0380014498.01.T01
Chr3 exon 55687840 55688243 55687840 ID=MsG0380014498.01.T01:exon:23828;Parent=MsG0380014498.01.T01
Chr3 exon 55689114 55689725 55689114 ID=MsG0380014498.01.T01:exon:23829;Parent=MsG0380014498.01.T01
Chr3 CDS 55681487 55681985 55681487 ID=MsG0380014498.01.T01:cds;Parent=MsG0380014498.01.T01
Chr3 CDS 55683308 55683457 55683308 ID=MsG0380014498.01.T01:cds;Parent=MsG0380014498.01.T01
Chr3 CDS 55686156 55686296 55686156 ID=MsG0380014498.01.T01:cds;Parent=MsG0380014498.01.T01
Chr3 CDS 55686833 55686961 55686833 ID=MsG0380014498.01.T01:cds;Parent=MsG0380014498.01.T01
Chr3 CDS 55687189 55687377 55687189 ID=MsG0380014498.01.T01:cds;Parent=MsG0380014498.01.T01
Chr3 CDS 55687840 55688243 55687840 ID=MsG0380014498.01.T01:cds;Parent=MsG0380014498.01.T01
Chr3 CDS 55689114 55689725 55689114 ID=MsG0380014498.01.T01:cds;Parent=MsG0380014498.01.T01
Gene Sequence

>MsG0380014498.01.T01

ATGCTAAAGGGATATACATTAGAAGGAAATTGGGATCAAGTTGCGGAATTATACAAATCTGATCCTAAGTTTAGCACAATAGAGATCAGCAAAAGTAGAGGAACAGCACTACACGTGGCAGTAAATGATGGCAATGAGGAAGTTGTTAAAAATCTTGTGAAATCAATCTTAACTCACAAAAATGTGAAGGCCCTTAAATGTAAGAATGAAAAAGGTGACACTCCTTTGCATCTTGCAGCATCAAGAGGATTCAAAAATATATGTGAATGTATCATAGGAGAAGGTCGTGAAAGGAAGGATTTGATTGACATTTATAACAATAATGGAGAAAGTCCTTTGTTTCTTGCTGCATTGTCTTGGCAAAAACAAACGTTTGTGTATCTCATCAAGTTTAAACCAGGTAGGAGTGATTGTGGTGGTAACTATTCTTATACTAAAGATCTTATTCGAAGCAATGGGGATAGTATTCTTCACTGTGCCATCCGGAGAGAACTTTTTGATTTGGCACTTATAATAATACATAAATATCCTGATCTTATTGTCATTCAAAACAAACTTGGATTTAGTCCTCTCAAACTTCTTGCTACCAGGCCCTCAGCCTTCAAAAGCGGATACAAGATGATATGGTGGAAGAAGATTCTTTACCACTGTATACCTGCGGGAGCCCTAAAAGTTGAAGAAGCAATCGAATATTATCAGTTGAAGCATGAGTCAAAACCACAAAAATTATGTCCAAAGAACTACGACACATGTTATCTATTTATTGATAAATGTGGAGAATATGCAACCGGATGTAAAAATATGGGAGAGAAGGACATAGGGTCGCCATCTGAACGCAAGCTTCTTCCAGAAAACTATGCCACATGTCTTTGGTTTTTGAAGGTTGCATACATCTTTACCTTTGGCCTTTCAGGAGTTGGGGTTGAAGAAATTAAAAAGATGAAGCAAAAGCACAAATGGAGTGGTCAACTCTTGAACATATTTATGGGGGATCCTTTTTTTGGAGGATTTACGTTGAATCCTTATGAATCGTACCTGGGAACCGGCGCCAAACCAACAGGAGATGTGAGTCGAACAGATTTCGAGTATGATTACAACCCAAATAAAGGAGATGATGAAAATGATGACGATGAGGACCCAAAGATTTTAGCAAAACTTAAACGTGAGAAAGCAATTTTGGAAAGTGAGACAGCAATTTTGACTGCAGCAAGAAATGGCATAGTTGAAATAGTGGAAAAGCTTATAACAAAAATACCAAGTTCCATATACGACCTTAACTTGGAAAATAAAAATGTATTACTTGTAGCAGTTGAGAACAGGAGAACCAATGTCGTTGAGGCATTAAGGAAACGTTTTGAAAAGGATGATAAAATGGCAATATTTGATGATCTAATCCAAGGTGTGGATAAGAAAGAAAACACTGTGTTACATTTAGCAGCTACCAAAAGTGATCGAGATTGGAACATATCTGGTGCTGCCTTGCAAATGATGTGGCATATAAAATGGTTTCAGTATACTAAAGGACTAGTGCCAGAGCATTTCACAGTTAGAACAAACAAAGATGACAAAACAGCTGGAGAATTGTTCAAGAAATCACATGAAACACTGGTAACAAAAGGTAGTGAATGGCTCAAAGATACTTCTGAATCTTGCTCTGTAGTAGCAGCACTCCTTGCCGGTGTTTCCTTCGCTACATCAAGCACTGTACCAGGCGGCAACAGAAGTGAAACAGGTGAACCAGCATTGGAAGGAAAGCCTGCATTTGATGCATTTGCTTTGTCTTCAGTAATTGGTCTTTGTTTCTCTGTCACTGCACTCGTAATGTTCCTGTCCATACTCACTTCTCGAAAAGAAGCCAAAGATTTCAGAATTGATATGCCAAGGAAACTTCTTTTGGGATTAAGTTCTCTTTTCTTATCCATTATTGCAATGTTCGTCGCTTTTTGCTCTGGCCATTTCTTTCTTATTGACCAAAAATACAAGCACATTGTGTTCCTCATTTATTCAGTCACTTGCTTCCCTGTGACTTTGTATGCAATAGCACAACTTCCACTTTACATTGATCTTCTTAGAAGCATTGTAACCAAAGTGCCAAAGACAAGTGATAAGGGGGAGGAAATATAA
Protein sequence

>MsG0380014498.01.T01

MLKGYTLEGNWDQVAELYKSDPKFSTIEISKSRGTALHVAVNDGNEEVVKNLVKSILTHKNVKALKCKNEKGDTPLHLAASRGFKNICECIIGEGRERKDLIDIYNNNGESPLFLAALSWQKQTFVYLIKFKPGRSDCGGNYSYTKDLIRSNGDSILHCAIRRELFDLALIIIHKYPDLIVIQNKLGFSPLKLLATRPSAFKSGYKMIWWKKILYHCIPAGALKVEEAIEYYQLKHESKPQKLCPKNYDTCYLFIDKCGEYATGCKNMGEKDIGSPSERKLLPENYATCLWFLKVAYIFTFGLSGVGVEEIKKMKQKHKWSGQLLNIFMGDPFFGGFTLNPYESYLGTGAKPTGDVSRTDFEYDYNPNKGDDENDDDEDPKILAKLKREKAILESETAILTAARNGIVEIVEKLITKIPSSIYDLNLENKNVLLVAVENRRTNVVEALRKRFEKDDKMAIFDDLIQGVDKKENTVLHLAATKSDRDWNISGAALQMMWHIKWFQYTKGLVPEHFTVRTNKDDKTAGELFKKSHETLVTKGSEWLKDTSESCSVVAALLAGVSFATSSTVPGGNRSETGEPALEGKPAFDAFALSSVIGLCFSVTALVMFLSILTSRKEAKDFRIDMPRKLLLGLSSLFLSIIAMFVAFCSGHFFLIDQKYKHIVFLIYSVTCFPVTLYAIAQLPLYIDLLRSIVTKVPKTSDKGEEI*