AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014948.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014948.01.T01 MTR_3g466440 93.311 598 38 2 1 597 1 597 0.0 1059
MsG0380014948.01.T01 MTR_3g109540 47.573 103 54 0 488 590 118 220 2.43e-20 92.4
MsG0380014948.01.T01 MTR_4g088800 52.747 91 43 0 489 579 118 208 4.00e-19 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014948.01.T01 AT5G58370 74.486 243 59 2 355 597 158 397 2.41e-126 380
MsG0380014948.01.T01 AT5G58370 74.486 243 59 2 355 597 158 397 2.41e-126 380
MsG0380014948.01.T01 AT5G58370 74.486 243 59 2 355 597 158 397 3.00e-126 379
MsG0380014948.01.T01 AT5G11480 51.456 103 50 0 488 590 135 237 6.23e-24 103
MsG0380014948.01.T01 AT2G22870 39.597 149 82 2 443 591 81 221 1.31e-20 93.2

Find 125 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGAACTGATTGACTTAA+TGG 0.128958 3:-62913012 MsG0380014948.01.T01:CDS
GAAACCTTTGTTTAAGAAAA+AGG 0.153434 3:-62916448 MsG0380014948.01.T01:CDS
GAGAGAGGTGATAGAGAAAA+TGG 0.190882 3:-62916993 MsG0380014948.01.T01:CDS
TGATAGGGAAAATGGGTTTA+AGG 0.213891 3:-62916832 MsG0380014948.01.T01:CDS
GGCGCATGATAGAAATAAAA+AGG 0.220678 3:-62914562 MsG0380014948.01.T01:CDS
GTGGTATTTGATAGGGAAAA+TGG 0.220889 3:-62916666 MsG0380014948.01.T01:CDS
TTAACAGATGAAGAGATTAG+AGG 0.278036 3:-62917167 MsG0380014948.01.T01:CDS
TGGGCGTTCTGAGACATTTC+AGG 0.280707 3:+62914751 None:intergenic
TGATAGAGAAAATGGGTATA+AGG 0.292592 3:-62916985 MsG0380014948.01.T01:CDS
CTTAAACAAAGGTTTCTTCT+TGG 0.296646 3:+62916455 None:intergenic
GAGGAAAGGTGAGAACTTCT+AGG 0.297398 3:-62916734 MsG0380014948.01.T01:CDS
TAGGCTGTATTGCACGGAAT+TGG 0.304754 3:+62914731 None:intergenic
TGATAGGGAAAATGGGTATA+AGG 0.310090 3:-62916658 MsG0380014948.01.T01:CDS
AAGAGAAATGAAGAGTTTAG+AGG 0.313889 3:-62917053 MsG0380014948.01.T01:CDS
TTAGTTGATTTGCCAGGATA+TGG 0.322044 3:-62913917 MsG0380014948.01.T01:CDS
ACAAGGATGTGGTATTTGAT+AGG 0.325073 3:-62916674 MsG0380014948.01.T01:CDS
TGATAGAGGAAATAGGTATA+AGG 0.326706 3:-62917084 MsG0380014948.01.T01:CDS
GAAATTCTTACACCAACTTT+AGG 0.349556 3:+62917209 None:intergenic
CCCTTCAATACTTACCTTTG+TGG 0.354751 3:-62914707 MsG0380014948.01.T01:CDS
GATAGAGGAAATAGGTATAA+GGG 0.357678 3:-62917083 MsG0380014948.01.T01:CDS
ATGATTATGATAGAGGAAAT+AGG 0.357802 3:-62917091 MsG0380014948.01.T01:CDS
CTTCCGGAGATTGCATTTGC+TGG 0.361097 3:-62914281 MsG0380014948.01.T01:intron
GATAGAGAAAATGGGTATAA+GGG 0.364549 3:-62916984 MsG0380014948.01.T01:CDS
CCGATGATGAACGTACAATC+TGG 0.385844 3:-62916389 MsG0380014948.01.T01:CDS
CTCTTGTTTGAGATATCATA+TGG 0.387910 3:+62916144 None:intergenic
AGAAGAGAAGGAGAAGAAAA+AGG 0.388904 3:-62914788 MsG0380014948.01.T01:CDS
AAGGACAAGAAAGAAATTGA+TGG 0.389314 3:-62916309 MsG0380014948.01.T01:CDS
AGGCTGTATTGCACGGAATT+GGG 0.391617 3:+62914732 None:intergenic
AAGAAAAGGGTGAACTTTAG+AGG 0.391930 3:-62916801 MsG0380014948.01.T01:CDS
GAACGTACAATCTGGGATTT+CGG 0.397533 3:-62916381 MsG0380014948.01.T01:CDS
GACAATAAACTTCTTCAACT+TGG 0.401509 3:-62913954 MsG0380014948.01.T01:CDS
GATAGGGAAAATGGGTTTAA+GGG 0.402625 3:-62916831 MsG0380014948.01.T01:CDS
AAAATCTGACATGAAGAAAC+CGG 0.404867 3:-62916238 MsG0380014948.01.T01:CDS
TTCTTCAATGTTCTCTCTGT+CGG 0.408094 3:+62914481 None:intergenic
ACTCCTCTCTTCACCCGATT+CGG 0.408284 3:+62916929 None:intergenic
GATAGGGAAAATGGGTATAA+GGG 0.419079 3:-62916657 MsG0380014948.01.T01:CDS
TCCACAAAGGTAAGTATTGA+AGG 0.423833 3:+62914706 None:intergenic
AAACTTTAAGGGAATGGAAT+CGG 0.426014 3:-62916616 MsG0380014948.01.T01:CDS
ACAATAAACTTCTTCAACTT+GGG 0.440946 3:-62913953 MsG0380014948.01.T01:CDS
GACTTTGGAGGAACCGAATC+GGG 0.442139 3:-62916942 MsG0380014948.01.T01:CDS
ATGAAGAAAAGGGTGGACTT+TGG 0.442859 3:-62916957 MsG0380014948.01.T01:CDS
AATGCAATCTCCGGAAGATT+AGG 0.443410 3:+62914287 None:intergenic
GGTGAAAATGATTATGATAG+AGG 0.450608 3:-62917098 MsG0380014948.01.T01:CDS
AACTTTAAGGGAATGGAATC+GGG 0.450814 3:-62916615 MsG0380014948.01.T01:CDS
TAATGCGCTTACTAGACAAT+GGG 0.452078 3:-62914114 MsG0380014948.01.T01:CDS
GAGAAGGGGATATTATCTAA+TGG 0.452192 3:+62914512 None:intergenic
GGACTTTGGAGGAACCGAAT+CGG 0.454928 3:-62916943 MsG0380014948.01.T01:CDS
CAAGGATGTGGTATTTGATA+GGG 0.462026 3:-62916673 MsG0380014948.01.T01:CDS
ATTTCCACCTCCTAATCTTC+CGG 0.464029 3:-62914297 MsG0380014948.01.T01:CDS
TCAATCAGTTCAATATCTCT+TGG 0.464126 3:+62913020 None:intergenic
GAAAGGAATCGGGTGAAGAA+AGG 0.467661 3:-62916779 MsG0380014948.01.T01:CDS
TGGTATTTGATAGGGAAAAT+GGG 0.472522 3:-62916665 MsG0380014948.01.T01:CDS
AGGGAAGGTGAGAAGTAGAA+AGG 0.472773 3:-62916886 MsG0380014948.01.T01:CDS
ATTATTCACAGCTGTTGGGC+AGG 0.474843 3:-62914586 MsG0380014948.01.T01:intron
CATGAAGAAACCGGGGTTGG+AGG 0.477547 3:-62916229 MsG0380014948.01.T01:CDS
AAATGTAAACTTTAAGGGAA+TGG 0.484393 3:-62916622 MsG0380014948.01.T01:CDS
TGGAGGAAAGCGAGAAATCA+TGG 0.484844 3:-62916494 MsG0380014948.01.T01:CDS
AGAGAGGTGATAGAGAAAAT+GGG 0.489685 3:-62916992 MsG0380014948.01.T01:CDS
CTTAGCTTAGTTGATTTGCC+AGG 0.491612 3:-62913923 MsG0380014948.01.T01:CDS
ATAAGGGGAAGATGAAGAAA+AGG 0.498161 3:-62916968 MsG0380014948.01.T01:CDS
AATTATTATTCACAGCTGTT+GGG 0.499350 3:-62914590 MsG0380014948.01.T01:intron
GAACTTTAGAGGAAAGGAAT+CGG 0.500217 3:-62916790 MsG0380014948.01.T01:CDS
ATATGCTAATGAGGAAGGAA+TGG 0.504541 3:-62916514 MsG0380014948.01.T01:CDS
AACTTTAGAGGAAAGGAATC+GGG 0.504644 3:-62916789 MsG0380014948.01.T01:CDS
AGAAGTAGAAAGGATGAGAA+TGG 0.506799 3:-62916876 MsG0380014948.01.T01:CDS
TTCAGGAAGTACAGAAGAGA+AGG 0.507107 3:-62914800 MsG0380014948.01.T01:intron
GAAGAGGGTATATGCTAATG+AGG 0.507461 3:-62916523 MsG0380014948.01.T01:CDS
ATACCTAGAATACCTGTGTA+TGG 0.510721 3:+62914063 None:intergenic
GCTTTCAAATCAAAGTTTGA+AGG 0.510875 3:-62916328 MsG0380014948.01.T01:CDS
GCATACGCAAATCCATATCC+TGG 0.515239 3:+62913905 None:intergenic
AGACGAAGTGAAAGAAGCTT+GGG 0.515480 3:-62913879 MsG0380014948.01.T01:CDS
GAAGGTGAGAGATGAGACTG+TGG 0.519033 3:-62916421 MsG0380014948.01.T01:CDS
AAGACGAAGTGAAAGAAGCT+TGG 0.522199 3:-62913880 MsG0380014948.01.T01:CDS
TTAAGGGGAAGATGAAGAAA+AGG 0.525378 3:-62916815 MsG0380014948.01.T01:CDS
CCAGATTGTACGTTCATCAT+CGG 0.525608 3:+62916389 None:intergenic
AGGAAAGGTGAGAACTTCTA+GGG 0.526253 3:-62916733 MsG0380014948.01.T01:CDS
AAGGGTGAACTTTAGAGGAA+AGG 0.526268 3:-62916796 MsG0380014948.01.T01:CDS
GGATTTCGGTAAATTGAAGC+AGG 0.529223 3:-62916367 MsG0380014948.01.T01:CDS
CCACAAAGGTAAGTATTGAA+GGG 0.529256 3:+62914707 None:intergenic
AGGGTATATGCTAATGAGGA+AGG 0.536732 3:-62916519 MsG0380014948.01.T01:CDS
ATACCAGCAAATGCAATCTC+CGG 0.538333 3:+62914278 None:intergenic
TAGAATACCTGTGTATGGCC+AGG 0.542553 3:+62914068 None:intergenic
GTACGGACATCGGACAAGCC+TGG 0.543313 3:-62914086 MsG0380014948.01.T01:CDS
CGATGATGAACGTACAATCT+GGG 0.549324 3:-62916388 MsG0380014948.01.T01:CDS
TTAATGCGCTTACTAGACAA+TGG 0.551015 3:-62914115 MsG0380014948.01.T01:CDS
AAGAAAAGGGTGGACTTTGG+AGG 0.552587 3:-62916954 MsG0380014948.01.T01:CDS
AAGGTAAGTATTGAAGGGCT+AGG 0.555476 3:+62914712 None:intergenic
CTAACAGGAAAGTCAAATGT+TGG 0.557214 3:-62914152 MsG0380014948.01.T01:intron
CGGTGAGAAGTTTCATGAGA+GGG 0.559454 3:-62916580 MsG0380014948.01.T01:CDS
GATGATTCCATTGCTGTCGA+TGG 0.567653 3:-62916117 MsG0380014948.01.T01:intron
TTAGCATCATCCTCCAACCC+CGG 0.568943 3:+62916219 None:intergenic
TGCTAATGAGGAAGGAATGG+AGG 0.569111 3:-62916511 MsG0380014948.01.T01:CDS
TGACATGAAGAAACCGGGGT+TGG 0.571279 3:-62916232 MsG0380014948.01.T01:CDS
GCGGTGAGAAGTTTCATGAG+AGG 0.574177 3:-62916581 MsG0380014948.01.T01:CDS
GGGATATTATCTAATGGCAT+AGG 0.574922 3:+62914518 None:intergenic
AACTGATTGACTTAATGGAA+AGG 0.575727 3:-62913007 MsG0380014948.01.T01:CDS
ATTCACAGCTGTTGGGCAGG+AGG 0.575796 3:-62914583 MsG0380014948.01.T01:intron
GAATGGAATCGGGTGATGAA+AGG 0.577538 3:-62916605 MsG0380014948.01.T01:CDS
AGAGGAAATGAAGAAAAGAG+TGG 0.580029 3:-62917149 MsG0380014948.01.T01:CDS
TTGAAGAATAATGTCTTCTG+AGG 0.583816 3:-62917261 None:intergenic
ATAGAGGAAATAGGTATAAG+GGG 0.584139 3:-62917082 MsG0380014948.01.T01:CDS
TAAGGGGAAGATGAAGAAAA+GGG 0.589283 3:-62916814 MsG0380014948.01.T01:CDS
ATAGAGAAAATGGGTATAAG+GGG 0.591187 3:-62916983 MsG0380014948.01.T01:CDS
GCAATCTCCGGAAGATTAGG+AGG 0.592767 3:+62914290 None:intergenic
AAATCTGACATGAAGAAACC+GGG 0.594958 3:-62916237 MsG0380014948.01.T01:CDS
TAAGGGGAAGATGAAGAAAA+GGG 0.595901 3:-62916967 MsG0380014948.01.T01:CDS
ATACGTACCATCGACAGCAA+TGG 0.602516 3:+62916110 None:intergenic
TGCGCTTACTAGACAATGGG+GGG 0.609310 3:-62914111 MsG0380014948.01.T01:CDS
ATCTCCGGAAGATTAGGAGG+TGG 0.612926 3:+62914293 None:intergenic
AAGGGCTAGGCTGTATTGCA+CGG 0.613549 3:+62914725 None:intergenic
ATAGGGAAAATGGGTTTAAG+GGG 0.615062 3:-62916830 MsG0380014948.01.T01:CDS
GAACCGAATCGGGTGAAGAG+AGG 0.615316 3:-62916932 MsG0380014948.01.T01:CDS
ATGCGCTTACTAGACAATGG+GGG 0.617876 3:-62914112 MsG0380014948.01.T01:CDS
CGAAGTGAAAGAAGCTTGGG+AGG 0.617961 3:-62913876 MsG0380014948.01.T01:CDS
GGGGAAGATGAAGAAAAGGG+TGG 0.621693 3:-62916964 MsG0380014948.01.T01:CDS
ATAGGGAAAATGGGTATAAG+GGG 0.628936 3:-62916656 MsG0380014948.01.T01:CDS
GAGTATGTAGCAACACGAGT+TGG 0.639967 3:-62913089 MsG0380014948.01.T01:CDS
GGACAAGCCTGGCCATACAC+AGG 0.644075 3:-62914075 MsG0380014948.01.T01:intron
GGTGAGAAGTTTCATGAGAG+GGG 0.660728 3:-62916579 MsG0380014948.01.T01:CDS
GAATCGGGTGAAGAAAGGAG+TGG 0.684828 3:-62916774 MsG0380014948.01.T01:CDS
GAAAGCGAGAAATCATGGAG+TGG 0.697161 3:-62916489 MsG0380014948.01.T01:CDS
GAATCGGGTGATGAAAGGAG+CGG 0.707376 3:-62916600 MsG0380014948.01.T01:CDS
GAATCGGGTGAAGAGAGGAG+TGG 0.709100 3:-62916927 MsG0380014948.01.T01:CDS
AATGCGCTTACTAGACAATG+GGG 0.709776 3:-62914113 MsG0380014948.01.T01:CDS
AATCTGACATGAAGAAACCG+GGG 0.727179 3:-62916236 MsG0380014948.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTTGTTTAAAAGATA+TGG - Chr3:62914512-62914531 MsG0380014948.01.T01:CDS 10.0%
!! AAAACAATATATAGTTTCTA+TGG + Chr3:62916777-62916796 None:intergenic 15.0%
!! AAAGAAAAATGTAAACTTTA+AGG - Chr3:62913627-62913646 MsG0380014948.01.T01:intron 15.0%
!! AACAAAAAATAGAAATGTTA+AGG + Chr3:62915320-62915339 None:intergenic 15.0%
!! AAGAAAAATGTAAACTTTAA+GGG - Chr3:62913628-62913647 MsG0380014948.01.T01:intron 15.0%
!! AATGAAATAAGTTAATAACA+AGG + Chr3:62917091-62917110 None:intergenic 15.0%
!! AATGTAAATCAATATAAAAC+CGG + Chr3:62917020-62917039 None:intergenic 15.0%
!! ACAAAAAATAGAAATGTTAA+GGG + Chr3:62915319-62915338 None:intergenic 15.0%
!! TTTAATTCCAAATAATTCAA+TGG - Chr3:62914315-62914334 MsG0380014948.01.T01:CDS 15.0%
!!! TAAAAAATTTGGATTCTTTT+GGG - Chr3:62913704-62913723 MsG0380014948.01.T01:intron 15.0%
!!! TTAAAAAATTTGGATTCTTT+TGG - Chr3:62913703-62913722 MsG0380014948.01.T01:intron 15.0%
!! AAATCAGATGTTTAACATTT+GGG + Chr3:62915200-62915219 None:intergenic 20.0%
!! AAGCTTAATGTTTATTAAAC+TGG - Chr3:62914778-62914797 MsG0380014948.01.T01:CDS 20.0%
!! AGCTTAATGTTTATTAAACT+GGG - Chr3:62914779-62914798 MsG0380014948.01.T01:CDS 20.0%
!! ATTCTTGTTGACATATTTAA+GGG - Chr3:62917050-62917069 MsG0380014948.01.T01:CDS 20.0%
!! TATTCTTGTTGACATATTTA+AGG - Chr3:62917049-62917068 MsG0380014948.01.T01:CDS 20.0%
!!! AATTACATTTTTTTCCACAA+AGG + Chr3:62915565-62915584 None:intergenic 20.0%
!!! ACTATATATTGTTTTGTTGT+CGG - Chr3:62916782-62916801 MsG0380014948.01.T01:CDS 20.0%
!!! AGTTTTAATTCATGATTTCT+TGG - Chr3:62916000-62916019 MsG0380014948.01.T01:intron 20.0%
!!! ATTTGTTTTCTTTCTGAATA+AGG - Chr3:62914875-62914894 MsG0380014948.01.T01:intron 20.0%
! AAAAAAATAACCTGCGAAAT+AGG + Chr3:62914584-62914603 None:intergenic 25.0%
! AATTATTATTCACAGCTGTT+GGG - Chr3:62915665-62915684 MsG0380014948.01.T01:intron 25.0%
! ACAATAAACTTCTTCAACTT+GGG - Chr3:62916302-62916321 MsG0380014948.01.T01:CDS 25.0%
! ACTAACACCATTGAATTATT+TGG + Chr3:62914325-62914344 None:intergenic 25.0%
! AGTAAATCAAAATACCTTCA+AGG + Chr3:62915638-62915657 None:intergenic 25.0%
! ATAAGTGCTTATACTATAAG+TGG - Chr3:62915147-62915166 MsG0380014948.01.T01:intron 25.0%
! ATCTTAAATGTTGAAACATG+TGG - Chr3:62916213-62916232 MsG0380014948.01.T01:CDS 25.0%
! ATGATAGAAATAAAAAGGGA+AGG - Chr3:62915698-62915717 MsG0380014948.01.T01:intron 25.0%
! ATGATTATGATAGAGGAAAT+AGG - Chr3:62913164-62913183 MsG0380014948.01.T01:intron 25.0%
! ATTAGAAAAAAGCCTAAAGT+TGG - Chr3:62913034-62913053 MsG0380014948.01.T01:CDS 25.0%
! CAAATCAGATGTTTAACATT+TGG + Chr3:62915201-62915220 None:intergenic 25.0%
! CATATAAAACCATATAGAAG+AGG + Chr3:62916872-62916891 None:intergenic 25.0%
! GATAAAAGAATTCACAGAAA+AGG - Chr3:62915251-62915270 MsG0380014948.01.T01:intron 25.0%
! GTCTCGTTTGAAAAAATATA+AGG - Chr3:62914752-62914771 MsG0380014948.01.T01:CDS 25.0%
! GTTTAAAAGATATGGTAGAT+TGG - Chr3:62914520-62914539 MsG0380014948.01.T01:CDS 25.0%
! TAATTATTATTCACAGCTGT+TGG - Chr3:62915664-62915683 MsG0380014948.01.T01:intron 25.0%
! TACTTCCTGAAATTAACTTA+CGG + Chr3:62915446-62915465 None:intergenic 25.0%
! TATGGATCGATTAACATAAA+GGG + Chr3:62916718-62916737 None:intergenic 25.0%
! TGGTAGTATGAACAAATTAT+GGG - Chr3:62914540-62914559 MsG0380014948.01.T01:CDS 25.0%
!! AAATGTAAACTTTAAGGGAA+TGG - Chr3:62913633-62913652 MsG0380014948.01.T01:intron 25.0%
!! GAAACCTTTGTTTAAGAAAA+AGG - Chr3:62913807-62913826 MsG0380014948.01.T01:intron 25.0%
!! GTTTTACCTTTTATTGTAGA+TGG - Chr3:62914278-62914297 MsG0380014948.01.T01:intron 25.0%
!! TATTGAACTGATTGACTTAA+TGG - Chr3:62917243-62917262 MsG0380014948.01.T01:CDS 25.0%
!! TTCTCCTTTTTCTTAAACAA+AGG + Chr3:62913814-62913833 None:intergenic 25.0%
!! TTGGTAGTATGAACAAATTA+TGG - Chr3:62914539-62914558 MsG0380014948.01.T01:CDS 25.0%
!!! AAACCACTAATTTTAGGTAA+AGG - Chr3:62917144-62917163 MsG0380014948.01.T01:CDS 25.0%
!!! CAAATAATTTCCTTTGAAAC+TGG - Chr3:62914232-62914251 MsG0380014948.01.T01:intron 25.0%
!!! CCTTTTGATTGATACAAAAT+GGG - Chr3:62917204-62917223 MsG0380014948.01.T01:CDS 25.0%
!!! CTATATATTGTTTTGTTGTC+GGG - Chr3:62916783-62916802 MsG0380014948.01.T01:CDS 25.0%
!!! CTCTTCTATATGGTTTTATA+TGG - Chr3:62916870-62916889 MsG0380014948.01.T01:CDS 25.0%
!!! CTTTTGATTGATACAAAATG+GGG - Chr3:62917205-62917224 MsG0380014948.01.T01:CDS 25.0%
!!! TATATATTGTTTTGTTGTCG+GGG - Chr3:62916784-62916803 MsG0380014948.01.T01:CDS 25.0%
!!! TTGATTTGAAAGCTTCTTTT+TGG + Chr3:62913920-62913939 None:intergenic 25.0%
AAAAGGATCAATTCACCTAT+GGG - Chr3:62915268-62915287 MsG0380014948.01.T01:intron 30.0%
AAAATCTGACATGAAGAAAC+CGG - Chr3:62914017-62914036 MsG0380014948.01.T01:intron 30.0%
AAACCTTAAAACCTTAGTGT+AGG - Chr3:62914823-62914842 MsG0380014948.01.T01:intron 30.0%
AAACTGTCATGTAGATCATA+TGG + Chr3:62915038-62915057 None:intergenic 30.0%
AACCTTAAAACCTTAGTGTA+GGG - Chr3:62914824-62914843 MsG0380014948.01.T01:intron 30.0%
AACTTACGGAATCAAATTCA+AGG + Chr3:62915432-62915451 None:intergenic 30.0%
AAGAGAAATGAAGAGTTTAG+AGG - Chr3:62913202-62913221 MsG0380014948.01.T01:intron 30.0%
AAGGACAAGAAAGAAATTGA+TGG - Chr3:62913946-62913965 MsG0380014948.01.T01:CDS 30.0%
AATCAATATAAAACCGGACT+TGG + Chr3:62917014-62917033 None:intergenic 30.0%
ACAAATCATATTCGTTTCAC+TGG + Chr3:62914861-62914880 None:intergenic 30.0%
ACTCCTTTACCTAAAATTAG+TGG + Chr3:62917150-62917169 None:intergenic 30.0%
ACTTCAAAGAATACTTTGCT+AGG - Chr3:62914481-62914500 MsG0380014948.01.T01:CDS 30.0%
AGGTAAAACAGTATGATTAC+AGG + Chr3:62914267-62914286 None:intergenic 30.0%
ATAGAGAAAATGGGTATAAG+GGG - Chr3:62913272-62913291 MsG0380014948.01.T01:intron 30.0%
ATAGAGGAAATAGGTATAAG+GGG - Chr3:62913173-62913192 MsG0380014948.01.T01:intron 30.0%
ATCTAATTGTCTACACAAAG+AGG - Chr3:62916614-62916633 MsG0380014948.01.T01:CDS 30.0%
ATTAAGCTGTTTATCCAAAC+AGG - Chr3:62915173-62915192 MsG0380014948.01.T01:intron 30.0%
CAAAAGACATTGAATTCTCA+GGG + Chr3:62916516-62916535 None:intergenic 30.0%
CGATAACCATCTACAATAAA+AGG + Chr3:62914287-62914306 None:intergenic 30.0%
CTTAAACAAAGGTTTCTTCT+TGG + Chr3:62913803-62913822 None:intergenic 30.0%
GAAATTCTTACACCAACTTT+AGG + Chr3:62913049-62913068 None:intergenic 30.0%
GACAAAACTAAAGGTTAAAC+TGG + Chr3:62914692-62914711 None:intergenic 30.0%
GACAATAAACTTCTTCAACT+TGG - Chr3:62916301-62916320 MsG0380014948.01.T01:CDS 30.0%
GAGGGGAAAGTTAAAAAATT+TGG - Chr3:62913693-62913712 MsG0380014948.01.T01:intron 30.0%
GATAGAGAAAATGGGTATAA+GGG - Chr3:62913271-62913290 MsG0380014948.01.T01:intron 30.0%
GATAGAGGAAATAGGTATAA+GGG - Chr3:62913172-62913191 MsG0380014948.01.T01:intron 30.0%
GCATTGTATCAAATTCTCAA+TGG - Chr3:62916415-62916434 MsG0380014948.01.T01:CDS 30.0%
GCGCATGATAGAAATAAAAA+GGG - Chr3:62915694-62915713 MsG0380014948.01.T01:intron 30.0%
GCTTTCAAATCAAAGTTTGA+AGG - Chr3:62913927-62913946 MsG0380014948.01.T01:CDS 30.0%
GGTGAAAATGATTATGATAG+AGG - Chr3:62913157-62913176 MsG0380014948.01.T01:intron 30.0%
GTATGGATCGATTAACATAA+AGG + Chr3:62916719-62916738 None:intergenic 30.0%
GTTTAAGAAAAAGGAGAAGA+AGG - Chr3:62913816-62913835 MsG0380014948.01.T01:intron 30.0%
TATGTCAACAAGAATACATG+AGG + Chr3:62917045-62917064 None:intergenic 30.0%
TCAATCAGTTCAATATCTCT+TGG + Chr3:62917238-62917257 None:intergenic 30.0%
TGATACAATGCATACTTACA+AGG + Chr3:62916406-62916425 None:intergenic 30.0%
TGATAGAGAAAATGGGTATA+AGG - Chr3:62913270-62913289 MsG0380014948.01.T01:intron 30.0%
TGATAGAGGAAATAGGTATA+AGG - Chr3:62913171-62913190 MsG0380014948.01.T01:intron 30.0%
TGATGTACAGACAAAACTAA+AGG + Chr3:62914701-62914720 None:intergenic 30.0%
TGATTCCGTAAGTTAATTTC+AGG - Chr3:62915438-62915457 MsG0380014948.01.T01:intron 30.0%
TGGTATTTGATAGGGAAAAT+GGG - Chr3:62913590-62913609 MsG0380014948.01.T01:intron 30.0%
TTAACAGATGAAGAGATTAG+AGG - Chr3:62913088-62913107 MsG0380014948.01.T01:CDS 30.0%
TTAAGCTGTTTATCCAAACA+GGG - Chr3:62915174-62915193 MsG0380014948.01.T01:intron 30.0%
TTAATGCATCATTTCCTTGA+AGG - Chr3:62915621-62915640 MsG0380014948.01.T01:intron 30.0%
TTGTTGACATATTTAAGGGT+TGG - Chr3:62917054-62917073 MsG0380014948.01.T01:CDS 30.0%
TTTAGAGGTGAAAAAAAGAG+TGG - Chr3:62913217-62913236 MsG0380014948.01.T01:intron 30.0%
! AAAATTTGGATTCTTTTGGG+AGG - Chr3:62913707-62913726 MsG0380014948.01.T01:intron 30.0%
! AAACTTTAAGGGAATGGAAT+CGG - Chr3:62913639-62913658 MsG0380014948.01.T01:intron 30.0%
! AACTGATTGACTTAATGGAA+AGG - Chr3:62917248-62917267 MsG0380014948.01.T01:CDS 30.0%
! ACAGATTTTCAGAAACAGAT+TGG - Chr3:62915904-62915923 MsG0380014948.01.T01:intron 30.0%
! ACCCTTTTCTTTTTCTTCAA+GGG + Chr3:62914078-62914097 None:intergenic 30.0%
! CCCATTTTGTATCAATCAAA+AGG + Chr3:62917207-62917226 None:intergenic 30.0%
! CTCTTGTTTGAGATATCATA+TGG + Chr3:62914114-62914133 None:intergenic 30.0%
! GACGTTTTTACATGTAAAAC+TGG + Chr3:62916553-62916572 None:intergenic 30.0%
! TTATGCACAGTTTTCGATAT+CGG - Chr3:62916926-62916945 MsG0380014948.01.T01:CDS 30.0%
! TTCAGATTTTTACAGTTCTG+TGG + Chr3:62914449-62914468 None:intergenic 30.0%
! TTCTTCATGTCAGATTTTGA+AGG + Chr3:62914015-62914034 None:intergenic 30.0%
!! AGAAGAAAGTTTTATGAGAG+AGG - Chr3:62913136-62913155 MsG0380014948.01.T01:intron 30.0%
!! ATATATTGTTTTGTTGTCGG+GGG - Chr3:62916785-62916804 MsG0380014948.01.T01:CDS 30.0%
!! GCCTTTTGATTGATACAAAA+TGG - Chr3:62917203-62917222 MsG0380014948.01.T01:CDS 30.0%
!! GTCGTTTTGAATGCAATAAA+CGG + Chr3:62915811-62915830 None:intergenic 30.0%
!! TGATGAGAATCGTTTTAACA+AGG - Chr3:62913564-62913583 MsG0380014948.01.T01:intron 30.0%
!!! ACTGTTGTCATTTTTTGTTC+CGG - Chr3:62915872-62915891 MsG0380014948.01.T01:intron 30.0%
!!! CTATTTTTTGTTTCACACGT+TGG - Chr3:62915328-62915347 MsG0380014948.01.T01:intron 30.0%
!!! TACACTAAGGTTTTAAGGTT+TGG + Chr3:62914824-62914843 None:intergenic 30.0%
!!! TAGTTTTGTCTGTACATCAT+AGG - Chr3:62914702-62914721 MsG0380014948.01.T01:CDS 30.0%
AAAGGAAAAAGGTGGAGTAT+AGG + Chr3:62914630-62914649 None:intergenic 35.0%
AAATCTGACATGAAGAAACC+GGG - Chr3:62914018-62914037 MsG0380014948.01.T01:intron 35.0%
AACCATAAATCCCTACACTA+AGG + Chr3:62914837-62914856 None:intergenic 35.0%
AACCTTAGTGTAGGGATTTA+TGG - Chr3:62914832-62914851 MsG0380014948.01.T01:intron 35.0%
AACTTAGTATCCTATTTCGC+AGG - Chr3:62914571-62914590 MsG0380014948.01.T01:CDS 35.0%
AAGAAAAGGGTGAACTTTAG+AGG - Chr3:62913454-62913473 MsG0380014948.01.T01:intron 35.0%
AAGGAAAAAGGTGGAGTATA+GGG + Chr3:62914629-62914648 None:intergenic 35.0%
AATCGATCCATACAATGATC+AGG - Chr3:62916726-62916745 MsG0380014948.01.T01:CDS 35.0%
AATGATCAGGAGATAAGGTT+TGG - Chr3:62916739-62916758 MsG0380014948.01.T01:CDS 35.0%
ACAAGGATGTGGTATTTGAT+AGG - Chr3:62913581-62913600 MsG0380014948.01.T01:intron 35.0%
ACCGTCAGTTCTCATATTAA+TGG + Chr3:62916952-62916971 None:intergenic 35.0%
AGAAAAAGAAAAGGGTGATG+AGG - Chr3:62914082-62914101 MsG0380014948.01.T01:CDS 35.0%
AGAAGAGAAGGAGAAGAAAA+AGG - Chr3:62915467-62915486 MsG0380014948.01.T01:intron 35.0%
AGAAGTAGAAAGGATGAGAA+TGG - Chr3:62913379-62913398 MsG0380014948.01.T01:intron 35.0%
AGAGAGGTGATAGAGAAAAT+GGG - Chr3:62913263-62913282 MsG0380014948.01.T01:intron 35.0%
AGAGGAAATGAAGAAAAGAG+TGG - Chr3:62913106-62913125 MsG0380014948.01.T01:intron 35.0%
AGCCAATTCAAATATACCCT+TGG + Chr3:62914916-62914935 None:intergenic 35.0%
ATAAGGGGAAGATGAAGAAA+AGG - Chr3:62913287-62913306 MsG0380014948.01.T01:intron 35.0%
ATACCTAGAATACCTGTGTA+TGG + Chr3:62916195-62916214 None:intergenic 35.0%
ATAGGGAAAATGGGTATAAG+GGG - Chr3:62913599-62913618 MsG0380014948.01.T01:intron 35.0%
ATATGCTAATGAGGAAGGAA+TGG - Chr3:62913741-62913760 MsG0380014948.01.T01:intron 35.0%
ATCAAATTCTCAATGGTCAC+TGG - Chr3:62916422-62916441 MsG0380014948.01.T01:CDS 35.0%
CAAGGATGTGGTATTTGATA+GGG - Chr3:62913582-62913601 MsG0380014948.01.T01:intron 35.0%
CATACAATGATCAGGAGATA+AGG - Chr3:62916734-62916753 MsG0380014948.01.T01:CDS 35.0%
CCAAAAGACATTGAATTCTC+AGG + Chr3:62916517-62916536 None:intergenic 35.0%
CCCCTTGAAGAAAAAGAAAA+GGG - Chr3:62914074-62914093 MsG0380014948.01.T01:intron 35.0%
CTAACAGGAAAGTCAAATGT+TGG - Chr3:62916103-62916122 MsG0380014948.01.T01:intron 35.0%
CTGGTTCCAGTGATATTATA+CGG + Chr3:62914673-62914692 None:intergenic 35.0%
CTTATCTCCTGATCATTGTA+TGG + Chr3:62916736-62916755 None:intergenic 35.0%
GAAAAGGATCAATTCACCTA+TGG - Chr3:62915267-62915286 MsG0380014948.01.T01:intron 35.0%
GAGAAGGGGATATTATCTAA+TGG + Chr3:62915746-62915765 None:intergenic 35.0%
GATAGGGAAAATGGGTATAA+GGG - Chr3:62913598-62913617 MsG0380014948.01.T01:intron 35.0%
GCAGATAATTCACGATTTGT+TGG + Chr3:62916280-62916299 None:intergenic 35.0%
GCCATTAATATGAGAACTGA+CGG - Chr3:62916948-62916967 MsG0380014948.01.T01:CDS 35.0%
GGCGCATGATAGAAATAAAA+AGG - Chr3:62915693-62915712 MsG0380014948.01.T01:intron 35.0%
GGGATATTATCTAATGGCAT+AGG + Chr3:62915740-62915759 None:intergenic 35.0%
GTGGTATTTGATAGGGAAAA+TGG - Chr3:62913589-62913608 MsG0380014948.01.T01:intron 35.0%
TAAGGGGAAGATGAAGAAAA+GGG - Chr3:62913288-62913307 MsG0380014948.01.T01:intron 35.0%
TAATGCGCTTACTAGACAAT+GGG - Chr3:62916141-62916160 MsG0380014948.01.T01:CDS 35.0%
TACACAAAGAGGTGATTTAG+CGG - Chr3:62916625-62916644 MsG0380014948.01.T01:CDS 35.0%
TATAAAACCGGACTTGGATT+CGG + Chr3:62917008-62917027 None:intergenic 35.0%
TATCATGTGCCTCTTCTATA+TGG - Chr3:62916860-62916879 MsG0380014948.01.T01:CDS 35.0%
TGATAGGGAAAATGGGTATA+AGG - Chr3:62913597-62913616 MsG0380014948.01.T01:intron 35.0%
TTAAGGGGAAGATGAAGAAA+AGG - Chr3:62913440-62913459 MsG0380014948.01.T01:intron 35.0%
TTAATGCGCTTACTAGACAA+TGG - Chr3:62916140-62916159 MsG0380014948.01.T01:CDS 35.0%
TTCTTCAATGTTCTCTCTGT+CGG + Chr3:62915777-62915796 None:intergenic 35.0%
! AACTTTAAGGGAATGGAATC+GGG - Chr3:62913640-62913659 MsG0380014948.01.T01:intron 35.0%
! AACTTTAGAGGAAAGGAATC+GGG - Chr3:62913466-62913485 MsG0380014948.01.T01:intron 35.0%
! ATAGGGAAAATGGGTTTAAG+GGG - Chr3:62913425-62913444 MsG0380014948.01.T01:intron 35.0%
! ATCCCTACACTAAGGTTTTA+AGG + Chr3:62914829-62914848 None:intergenic 35.0%
! CACCCTTTTCTTTTTCTTCA+AGG + Chr3:62914079-62914098 None:intergenic 35.0%
! CCCTTTTCTTTTTCTTCAAG+GGG + Chr3:62914077-62914096 None:intergenic 35.0%
! CCTGAGAATTCAATGTCTTT+TGG - Chr3:62916514-62916533 MsG0380014948.01.T01:CDS 35.0%
! CGGTTTTTGATAGGGAAAAT+GGG - Chr3:62913416-62913435 MsG0380014948.01.T01:intron 35.0%
! GAACTTTAGAGGAAAGGAAT+CGG - Chr3:62913465-62913484 MsG0380014948.01.T01:intron 35.0%
! GACACATTTTCCAGTTTCAA+AGG + Chr3:62914245-62914264 None:intergenic 35.0%
! GACCAAGGGTATATTTGAAT+TGG - Chr3:62914911-62914930 MsG0380014948.01.T01:intron 35.0%
! GATAGGGAAAATGGGTTTAA+GGG - Chr3:62913424-62913443 MsG0380014948.01.T01:intron 35.0%
! GTCTGTTTGTTAACATGTCA+AGG - Chr3:62916465-62916484 MsG0380014948.01.T01:CDS 35.0%
! TCGGGAAAACCACTAATTTT+AGG - Chr3:62917138-62917157 MsG0380014948.01.T01:CDS 35.0%
! TGATAGGGAAAATGGGTTTA+AGG - Chr3:62913423-62913442 MsG0380014948.01.T01:intron 35.0%
!! AGTGCTGATTAGTTGTGTTT+CGG - Chr3:62917119-62917138 MsG0380014948.01.T01:CDS 35.0%
!! CCACAAAGGTAAGTATTGAA+GGG + Chr3:62915551-62915570 None:intergenic 35.0%
!! CTGTTTCTGAAAATCTGTCT+CGG + Chr3:62915902-62915921 None:intergenic 35.0%
!! GAAGTTTTATGAGAGAGGAA+AGG - Chr3:62913507-62913526 MsG0380014948.01.T01:intron 35.0%
!! GAATCGTTTTAACAAGGATG+TGG - Chr3:62913570-62913589 MsG0380014948.01.T01:intron 35.0%
!! GTGAGAAGTTTTATGAGAGA+GGG - Chr3:62913350-62913369 MsG0380014948.01.T01:intron 35.0%
!! TCCACAAAGGTAAGTATTGA+AGG + Chr3:62915552-62915571 None:intergenic 35.0%
!! TGTCTTCTGAGGAAGTTTTA+AGG - Chr3:62913005-62913024 MsG0380014948.01.T01:CDS 35.0%
!! TTAGTTGATTTGCCAGGATA+TGG - Chr3:62916338-62916357 MsG0380014948.01.T01:CDS 35.0%
!!! GAATGGTTTTAACAAGGATG+CGG - Chr3:62913396-62913415 MsG0380014948.01.T01:intron 35.0%
!!! GGATGAGAATGGTTTTAACA+AGG - Chr3:62913390-62913409 MsG0380014948.01.T01:intron 35.0%
!!! GTTTTGAAGTTTGAGACCAA+GGG - Chr3:62914897-62914916 MsG0380014948.01.T01:intron 35.0%
!!! TTGTTTTTTGCTGACTGTTC+TGG - Chr3:62916080-62916099 MsG0380014948.01.T01:intron 35.0%
AAAGGTGGAGTATAGGGTTT+AGG + Chr3:62914623-62914642 None:intergenic 40.0%
AAGACGAAGTGAAAGAAGCT+TGG - Chr3:62916375-62916394 MsG0380014948.01.T01:CDS 40.0%
AAGGTGGAGTATAGGGTTTA+GGG + Chr3:62914622-62914641 None:intergenic 40.0%
AATCTGACATGAAGAAACCG+GGG - Chr3:62914019-62914038 MsG0380014948.01.T01:intron 40.0%
AATGCAATCTCCGGAAGATT+AGG + Chr3:62915971-62915990 None:intergenic 40.0%
AATGCGCTTACTAGACAATG+GGG - Chr3:62916142-62916161 MsG0380014948.01.T01:CDS 40.0%
AGACGAAGTGAAAGAAGCTT+GGG - Chr3:62916376-62916395 MsG0380014948.01.T01:CDS 40.0%
AGGAAAGGTGAGAACTTCTA+GGG - Chr3:62913522-62913541 MsG0380014948.01.T01:intron 40.0%
AGGGTATATGCTAATGAGGA+AGG - Chr3:62913736-62913755 MsG0380014948.01.T01:intron 40.0%
ATACCAGCAAATGCAATCTC+CGG + Chr3:62915980-62915999 None:intergenic 40.0%
ATTTCCACCTCCTAATCTTC+CGG - Chr3:62915958-62915977 MsG0380014948.01.T01:intron 40.0%
CCAGATTGTACGTTCATCAT+CGG + Chr3:62913869-62913888 None:intergenic 40.0%
CCCTTCAATACTTACCTTTG+TGG - Chr3:62915548-62915567 MsG0380014948.01.T01:intron 40.0%
CGATGATGAACGTACAATCT+GGG - Chr3:62913867-62913886 MsG0380014948.01.T01:intron 40.0%
CTACTCACTGGAAAGGAAAA+AGG + Chr3:62914641-62914660 None:intergenic 40.0%
GAAAATCTGTCTCGGATTAC+CGG + Chr3:62915894-62915913 None:intergenic 40.0%
GAGAGAGGTGATAGAGAAAA+TGG - Chr3:62913262-62913281 MsG0380014948.01.T01:intron 40.0%
GCCCCTTGAAGAAAAAGAAA+AGG - Chr3:62914073-62914092 MsG0380014948.01.T01:intron 40.0%
GGATTTCGGTAAATTGAAGC+AGG - Chr3:62913888-62913907 MsG0380014948.01.T01:CDS 40.0%
TCCATTTCTACTCACTGGAA+AGG + Chr3:62914648-62914667 None:intergenic 40.0%
TCCTTTCCAGTGAGTAGAAA+TGG - Chr3:62914644-62914663 MsG0380014948.01.T01:intron 40.0%
TGGAAGCCGTATAATATCAC+TGG - Chr3:62914664-62914683 MsG0380014948.01.T01:intron 40.0%
TTGTTTACTGCAGCAGAATC+TGG + Chr3:62916897-62916916 None:intergenic 40.0%
TTTAACATTTGGGCCCTGTT+TGG + Chr3:62915190-62915209 None:intergenic 40.0%
! AAGGGTGAACTTTAGAGGAA+AGG - Chr3:62913459-62913478 MsG0380014948.01.T01:intron 40.0%
! ACAAGGATGCGGTTTTTGAT+AGG - Chr3:62913407-62913426 MsG0380014948.01.T01:intron 40.0%
! ATGAAGAAAAGGGTGGACTT+TGG - Chr3:62913298-62913317 MsG0380014948.01.T01:intron 40.0%
! CAAGGATGCGGTTTTTGATA+GGG - Chr3:62913408-62913427 MsG0380014948.01.T01:intron 40.0%
! GAACGTACAATCTGGGATTT+CGG - Chr3:62913874-62913893 MsG0380014948.01.T01:CDS 40.0%
! GAAGAGGGTATATGCTAATG+AGG - Chr3:62913732-62913751 MsG0380014948.01.T01:intron 40.0%
! GAGTATAGGGTTTAGGGTTT+AGG + Chr3:62914616-62914635 None:intergenic 40.0%
! GCGGTTTTTGATAGGGAAAA+TGG - Chr3:62913415-62913434 MsG0380014948.01.T01:intron 40.0%
! TTCAGGAAGTACAGAAGAGA+AGG - Chr3:62915455-62915474 MsG0380014948.01.T01:intron 40.0%
!! AAGGTAAGTATTGAAGGGCT+AGG + Chr3:62915546-62915565 None:intergenic 40.0%
!! ATTCTTTTGGGAGGAAGAAG+AGG - Chr3:62913716-62913735 MsG0380014948.01.T01:intron 40.0%
!! CTGTCGGAACTTTTAGAGAA+GGG + Chr3:62915761-62915780 None:intergenic 40.0%
!! CTTAGCTTAGTTGATTTGCC+AGG - Chr3:62916332-62916351 MsG0380014948.01.T01:CDS 40.0%
!! GAAGTTTTATGAGAGAGGGA+AGG - Chr3:62913354-62913373 MsG0380014948.01.T01:intron 40.0%
!! GGTGAGAAGTTTTATGAGAG+AGG - Chr3:62913349-62913368 MsG0380014948.01.T01:intron 40.0%
!! GTGCTGATTAGTTGTGTTTC+GGG - Chr3:62917120-62917139 MsG0380014948.01.T01:CDS 40.0%
!! TCTGTCGGAACTTTTAGAGA+AGG + Chr3:62915762-62915781 None:intergenic 40.0%
!! TGTCGGAACTTTTAGAGAAG+GGG + Chr3:62915760-62915779 None:intergenic 40.0%
!! TTCTTTTGGGAGGAAGAAGA+GGG - Chr3:62913717-62913736 MsG0380014948.01.T01:intron 40.0%
!!! GGTTTTGAAGTTTGAGACCA+AGG - Chr3:62914896-62914915 MsG0380014948.01.T01:intron 40.0%
AAGAGGTGATTTAGCGGTTC+TGG - Chr3:62916631-62916650 MsG0380014948.01.T01:CDS 45.0%
AGGCTGTATTGCACGGAATT+GGG + Chr3:62915526-62915545 None:intergenic 45.0%
AGGGAAGGTGAGAAGTAGAA+AGG - Chr3:62913369-62913388 MsG0380014948.01.T01:intron 45.0%
ATACGTACCATCGACAGCAA+TGG + Chr3:62914148-62914167 None:intergenic 45.0%
ATGCGCTTACTAGACAATGG+GGG - Chr3:62916143-62916162 MsG0380014948.01.T01:CDS 45.0%
ATTATTCACAGCTGTTGGGC+AGG - Chr3:62915669-62915688 MsG0380014948.01.T01:intron 45.0%
CCGATGATGAACGTACAATC+TGG - Chr3:62913866-62913885 MsG0380014948.01.T01:intron 45.0%
CGGTGAGAAGTTTCATGAGA+GGG - Chr3:62913675-62913694 MsG0380014948.01.T01:intron 45.0%
CTCACTGGAAAGGAAAAAGG+TGG + Chr3:62914638-62914657 None:intergenic 45.0%
GAAAGCGAGAAATCATGGAG+TGG - Chr3:62913766-62913785 MsG0380014948.01.T01:intron 45.0%
GAAAGGAATCGGGTGAAGAA+AGG - Chr3:62913476-62913495 MsG0380014948.01.T01:intron 45.0%
GAAGGAGAAGAAAAAGGACG+CGG - Chr3:62915473-62915492 MsG0380014948.01.T01:intron 45.0%
GAATGGAATCGGGTGATGAA+AGG - Chr3:62913650-62913669 MsG0380014948.01.T01:intron 45.0%
GAGGAAAGGTGAGAACTTCT+AGG - Chr3:62913521-62913540 MsG0380014948.01.T01:intron 45.0%
GAGTATGTAGCAACACGAGT+TGG - Chr3:62917166-62917185 MsG0380014948.01.T01:CDS 45.0%
GATGATTCCATTGCTGTCGA+TGG - Chr3:62914138-62914157 MsG0380014948.01.T01:CDS 45.0%
GCATACGCAAATCCATATCC+TGG + Chr3:62916353-62916372 None:intergenic 45.0%
GGTGAGAAGTTTCATGAGAG+GGG - Chr3:62913676-62913695 MsG0380014948.01.T01:intron 45.0%
GGTTGAGATCGAAAACAGTG+TGG - Chr3:62916969-62916988 MsG0380014948.01.T01:CDS 45.0%
TAGAATACCTGTGTATGGCC+AGG + Chr3:62916190-62916209 None:intergenic 45.0%
TAGGCTGTATTGCACGGAAT+TGG + Chr3:62915527-62915546 None:intergenic 45.0%
TCAATGGTCACTGGTCACAT+TGG - Chr3:62916431-62916450 MsG0380014948.01.T01:CDS 45.0%
TGCTAATGAGGAAGGAATGG+AGG - Chr3:62913744-62913763 MsG0380014948.01.T01:intron 45.0%
TGGAGGAAAGCGAGAAATCA+TGG - Chr3:62913761-62913780 MsG0380014948.01.T01:intron 45.0%
TGGCCATACACAGGTATTCT+AGG - Chr3:62916189-62916208 MsG0380014948.01.T01:CDS 45.0%
TTAAGGGAACGACGATCATC+AGG + Chr3:62915303-62915322 None:intergenic 45.0%
! AAGAAAAGGGTGGACTTTGG+AGG - Chr3:62913301-62913320 MsG0380014948.01.T01:intron 45.0%
AAGGGCTAGGCTGTATTGCA+CGG + Chr3:62915533-62915552 None:intergenic 50.0%
ACTCCTCTCTTCACCCGATT+CGG + Chr3:62913329-62913348 None:intergenic 50.0%
ATCAGGTGTTTCGCTCCCAT+AGG + Chr3:62915286-62915305 None:intergenic 50.0%
ATCTCCGGAAGATTAGGAGG+TGG + Chr3:62915965-62915984 None:intergenic 50.0%
CGAAGTGAAAGAAGCTTGGG+AGG - Chr3:62916379-62916398 MsG0380014948.01.T01:CDS 50.0%
CGGCTTCCATTTCTACTCAC+TGG + Chr3:62914653-62914672 None:intergenic 50.0%
CTAGACAATGGGGGGTTGTA+CGG - Chr3:62916152-62916171 MsG0380014948.01.T01:CDS 50.0%
CTTCCGGAGATTGCATTTGC+TGG - Chr3:62915974-62915993 MsG0380014948.01.T01:intron 50.0%
GAAGGTGAGAGATGAGACTG+TGG - Chr3:62913834-62913853 MsG0380014948.01.T01:intron 50.0%
GAATCGGGTGAAGAAAGGAG+TGG - Chr3:62913481-62913500 MsG0380014948.01.T01:intron 50.0%
GAATCGGGTGATGAAAGGAG+CGG - Chr3:62913655-62913674 MsG0380014948.01.T01:intron 50.0%
GCAATCTCCGGAAGATTAGG+AGG + Chr3:62915968-62915987 None:intergenic 50.0%
GCGGTGAGAAGTTTCATGAG+AGG - Chr3:62913674-62913693 MsG0380014948.01.T01:intron 50.0%
GCTCTCTCAAACAGTCTCAC+AGG + Chr3:62914967-62914986 None:intergenic 50.0%
GGGGAAGATGAAGAAAAGGG+TGG - Chr3:62913291-62913310 MsG0380014948.01.T01:intron 50.0%
TACTGCACCGAATCCAAGTC+CGG - Chr3:62916998-62917017 MsG0380014948.01.T01:CDS 50.0%
TGACATGAAGAAACCGGGGT+TGG - Chr3:62914023-62914042 MsG0380014948.01.T01:intron 50.0%
TGCGCTTACTAGACAATGGG+GGG - Chr3:62916144-62916163 MsG0380014948.01.T01:CDS 50.0%
TTAGCATCATCCTCCAACCC+CGG + Chr3:62914039-62914058 None:intergenic 50.0%
! GACTTTGGAGGAACCGAATC+GGG - Chr3:62913313-62913332 MsG0380014948.01.T01:intron 50.0%
! GGAATTTTTCGCTGCTGCGA+AGG - Chr3:62915925-62915944 MsG0380014948.01.T01:intron 50.0%
! GGACTTTGGAGGAACCGAAT+CGG - Chr3:62913312-62913331 MsG0380014948.01.T01:intron 50.0%
! TGCTGACTGTTCTGGCTAAC+AGG - Chr3:62916088-62916107 MsG0380014948.01.T01:intron 50.0%
!! TGGGCGTTCTGAGACATTTC+AGG + Chr3:62915507-62915526 None:intergenic 50.0%
ATGGGGGGTTGTACGGACAT+CGG - Chr3:62916159-62916178 MsG0380014948.01.T01:CDS 55.0%
ATTCACAGCTGTTGGGCAGG+AGG - Chr3:62915672-62915691 MsG0380014948.01.T01:intron 55.0%
CATGAAGAAACCGGGGTTGG+AGG - Chr3:62914026-62914045 MsG0380014948.01.T01:intron 55.0%
GAACCGAATCGGGTGAAGAG+AGG - Chr3:62913323-62913342 MsG0380014948.01.T01:intron 55.0%
GAATCGGGTGAAGAGAGGAG+TGG - Chr3:62913328-62913347 MsG0380014948.01.T01:intron 55.0%
GGACAAGCCTGGCCATACAC+AGG - Chr3:62916180-62916199 MsG0380014948.01.T01:CDS 60.0%
GTACGGACATCGGACAAGCC+TGG - Chr3:62916169-62916188 MsG0380014948.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 62913004 62917273 62913004 ID=MsG0380014948.01;Name=MsG0380014948.01
Chr3 mRNA 62913004 62917273 62913004 ID=MsG0380014948.01.T01;Parent=MsG0380014948.01;Name=MsG0380014948.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|1|7|0|597
Chr3 exon 62916118 62917273 62916118 ID=MsG0380014948.01.T01:exon:8536;Parent=MsG0380014948.01.T01
Chr3 exon 62914699 62914817 62914699 ID=MsG0380014948.01.T01:exon:8535;Parent=MsG0380014948.01.T01
Chr3 exon 62914478 62914597 62914478 ID=MsG0380014948.01.T01:exon:8534;Parent=MsG0380014948.01.T01
Chr3 exon 62914282 62914369 62914282 ID=MsG0380014948.01.T01:exon:8533;Parent=MsG0380014948.01.T01
Chr3 exon 62914076 62914167 62914076 ID=MsG0380014948.01.T01:exon:8532;Parent=MsG0380014948.01.T01
Chr3 exon 62913871 62913975 62913871 ID=MsG0380014948.01.T01:exon:8531;Parent=MsG0380014948.01.T01
Chr3 exon 62913004 62913117 62913004 ID=MsG0380014948.01.T01:exon:8530;Parent=MsG0380014948.01.T01
Chr3 CDS 62916118 62917273 62916118 ID=MsG0380014948.01.T01:cds;Parent=MsG0380014948.01.T01
Chr3 CDS 62914699 62914817 62914699 ID=MsG0380014948.01.T01:cds;Parent=MsG0380014948.01.T01
Chr3 CDS 62914478 62914597 62914478 ID=MsG0380014948.01.T01:cds;Parent=MsG0380014948.01.T01
Chr3 CDS 62914282 62914369 62914282 ID=MsG0380014948.01.T01:cds;Parent=MsG0380014948.01.T01
Chr3 CDS 62914076 62914167 62914076 ID=MsG0380014948.01.T01:cds;Parent=MsG0380014948.01.T01
Chr3 CDS 62913871 62913975 62913871 ID=MsG0380014948.01.T01:cds;Parent=MsG0380014948.01.T01
Chr3 CDS 62913004 62913117 62913004 ID=MsG0380014948.01.T01:cds;Parent=MsG0380014948.01.T01
Gene Sequence

>MsG0380014948.01.T01

ATGTCTTCTGAGGAAGTTTTAAGGAATAAGATTAGAAAAAAGCCTAAAGTTGGTGTAAGAATTTCTAAGAACTCGTCTAGAATTTTAACAGATGAAGAGATTAGAGGAAATGAAGAAAAGAGTGGTTATGAGAGAAGAAAGTTTTATGAGAGAGGTGAAAATGATTATGATAGAGGAAATAGGTATAAGGGGAAATTGAAGAGAAATGAAGAGTTTAGAGGTGAAAAAAAGAGTGGTTATGAGAGAAGAAAGTTTTATGAGAGAGGTGATAGAGAAAATGGGTATAAGGGGAAGATGAAGAAAAGGGTGGACTTTGGAGGAACCGAATCGGGTGAAGAGAGGAGTGGTGAGAAGTTTTATGAGAGAGGGAAGGTGAGAAGTAGAAAGGATGAGAATGGTTTTAACAAGGATGCGGTTTTTGATAGGGAAAATGGGTTTAAGGGGAAGATGAAGAAAAGGGTGAACTTTAGAGGAAAGGAATCGGGTGAAGAAAGGAGTGGTGAGAAGTTTTATGAGAGAGGAAAGGTGAGAACTTCTAGGGACTCGTCGAGAACTAGAAATGATGAGAATCGTTTTAACAAGGATGTGGTATTTGATAGGGAAAATGGGTATAAGGGGAAGTTAAAGAAAAATGTAAACTTTAAGGGAATGGAATCGGGTGATGAAAGGAGCGGTGAGAAGTTTCATGAGAGGGGAAAGTTAAAAAATTTGGATTCTTTTGGGAGGAAGAAGAGGGTATATGCTAATGAGGAAGGAATGGAGGAAAGCGAGAAATCATGGAGTGGTGTGAAGATATCCAAGAAGAAACCTTTGTTTAAGAAAAAGGAGAAGAAGGTGAGAGATGAGACTGTGGAAGAGAAAACCGATGATGAACGTACAATCTGGGATTTCGGTAAATTGAAGCAGGCAAAATCCAAAAAGAAGCTTTCAAATCAAAGTTTGAAGGACAAGAAAGAAATTGATGGAAAAGATGATAGTGCTGAGAAAGTTAGAGAAGAAGTTGTGTATCCTTCAAAATCTGACATGAAGAAACCGGGGTTGGAGGATGATGCTAAGAGACTAGATGATCGCCCCTTGAAGAAAAAGAAAAGGGTGATGAGGATTGATCCATATGATATCTCAAACAAGAGACTAGATGATTCCATTGCTGTCGATGGAAGTACAGAAGAGAAGGAGAAGAAAAAGGACGCGGAGAAAGAGCCTGAAATGTCTCAGAACGCCCAATTCCGTGCAATACAGCCTAGCCCTTCAATACTTACCTTTGTGGAAAAAAATCTGTTGGGCAGGAGGCGCATGATAGAAATAAAAAGGGAAGGCTACAATATAGAACTTCCTATGCCATTAGATAATATCCCCTTCTCTAAAAGTTCCGACAGAGAGAACATTGAAGAAAATATTTTCAGAAACAGATTGGAATTTTTCGCTGCTGCGAAGGTCTCATCGTCATTTCCACCTCCTAATCTTCCGGAGATTGCATTTGCTGGAAAGTCAAATGTTGGTAAATCATCTCTTCTTAATGCGCTTACTAGACAATGGGGGGTTGTACGGACATCGGACAAGCCTGGCCATACACAGACAATAAACTTCTTCAACTTGGGAACAAAGCTTAGCTTAGTTGATTTGCCAGGATATGGATTTGCGTATGCAAAAGACGAAGTGAAAGAAGCTTGGGAGGACCTTGTAAAGGAGTATGTAGCAACACGAGTTGGTCTCAAACAAGTATGCCTTTTGATTGATACAAAATGGGGCATGAAACCAAGAGATATTGAACTGATTGACTTAATGGAAAGGTAA

Protein sequence

>MsG0380014948.01.T01

MSSEEVLRNKIRKKPKVGVRISKNSSRILTDEEIRGNEEKSGYERRKFYERGENDYDRGNRYKGKLKRNEEFRGEKKSGYERRKFYERGDRENGYKGKMKKRVDFGGTESGEERSGEKFYERGKVRSRKDENGFNKDAVFDRENGFKGKMKKRVNFRGKESGEERSGEKFYERGKVRTSRDSSRTRNDENRFNKDVVFDRENGYKGKLKKNVNFKGMESGDERSGEKFHERGKLKNLDSFGRKKRVYANEEGMEESEKSWSGVKISKKKPLFKKKEKKVRDETVEEKTDDERTIWDFGKLKQAKSKKKLSNQSLKDKKEIDGKDDSAEKVREEVVYPSKSDMKKPGLEDDAKRLDDRPLKKKKRVMRIDPYDISNKRLDDSIAVDGSTEEKEKKKDAEKEPEMSQNAQFRAIQPSPSILTFVEKNLLGRRRMIEIKREGYNIELPMPLDNIPFSKSSDRENIEENIFRNRLEFFAAAKVSSSFPPPNLPEIAFAGKSNVGKSSLLNALTRQWGVVRTSDKPGHTQTINFFNLGTKLSLVDLPGYGFAYAKDEVKEAWEDLVKEYVATRVGLKQVCLLIDTKWGMKPRDIELIDLMER*