Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043479.01.T01 | XP_013445031.1 | 93.182 | 44 | 3 | 0 | 1 | 44 | 125 | 168 | 1.57E-18 | 85.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043479.01.T01 | Q9FE79 | 56.863 | 51 | 22 | 0 | 1 | 51 | 124 | 174 | 3.20E-13 | 63.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043479.01.T01 | A0A072TPC1 | 93.182 | 44 | 3 | 0 | 1 | 44 | 125 | 168 | 7.51e-19 | 85.5 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0880043479.01 | 0.809868 | 1.529492e-50 | 9.082998e-48 |
| MsG0080047869.01 | MsG0880043479.01 | 0.827378 | 1.617238e-54 | 1.558792e-51 |
| MsG0080047944.01 | MsG0880043479.01 | 0.819293 | 1.253008e-52 | 9.602883e-50 |
| MsG0080047957.01 | MsG0880043479.01 | 0.836733 | 7.868510e-57 | 1.000467e-53 |
| MsG0080047959.01 | MsG0880043479.01 | 0.826752 | 2.282646e-54 | 2.159981e-51 |
| MsG0080048113.01 | MsG0880043479.01 | 0.839196 | 1.830826e-57 | 2.509610e-54 |
| MsG0080048404.01 | MsG0880043479.01 | 0.844461 | 7.451432e-59 | 1.203818e-55 |
| MsG0080048461.01 | MsG0880043479.01 | 0.839018 | 2.036183e-57 | 2.775818e-54 |
| MsG0080048462.01 | MsG0880043479.01 | 0.855565 | 5.791373e-62 | 1.342687e-58 |
| MsG0080048618.01 | MsG0880043479.01 | 0.810933 | 9.006855e-51 | 5.502003e-48 |
| MsG0080048683.01 | MsG0880043479.01 | 0.804422 | 2.176589e-49 | 1.121753e-46 |
| MsG0080048774.01 | MsG0880043479.01 | 0.803128 | 4.042036e-49 | 2.015022e-46 |
| MsG0080048784.01 | MsG0880043479.01 | 0.807089 | 5.992414e-50 | 3.307462e-47 |
| MsG0080048785.01 | MsG0880043479.01 | 0.802201 | 6.276463e-49 | 3.055932e-46 |
| MsG0080048787.01 | MsG0880043479.01 | 0.843886 | 1.063257e-58 | 1.687306e-55 |
| MsG0080048856.01 | MsG0880043479.01 | 0.889503 | 2.286032e-73 | 1.849291e-69 |
| MsG0080048874.01 | MsG0880043479.01 | 0.829477 | 5.037328e-55 | 5.161295e-52 |
| MsG0080048892.01 | MsG0880043479.01 | 0.811796 | 5.853445e-51 | 3.657652e-48 |
| MsG0080049148.01 | MsG0880043479.01 | 0.804938 | 1.698760e-49 | 8.873232e-47 |
| MsG0180000047.01 | MsG0880043479.01 | 0.803235 | 3.841091e-49 | 1.920133e-46 |
| MsG0180000065.01 | MsG0880043479.01 | 0.833964 | 3.939727e-56 | 4.609657e-53 |
| MsG0180000091.01 | MsG0880043479.01 | 0.840946 | 6.400746e-58 | 9.262010e-55 |
| MsG0180000139.01 | MsG0880043479.01 | 0.833774 | 4.397025e-56 | 5.115040e-53 |
| MsG0180000142.01 | MsG0880043479.01 | 0.805691 | 1.181320e-49 | 6.290893e-47 |
| MsG0180000145.01 | MsG0880043479.01 | 0.853402 | 2.446904e-61 | 5.280883e-58 |
| MsG0180000178.01 | MsG0880043479.01 | 0.820245 | 7.593777e-53 | 5.976500e-50 |
| MsG0180000195.01 | MsG0880043479.01 | 0.842966 | 1.872423e-58 | 2.885933e-55 |
| MsG0180000209.01 | MsG0880043479.01 | 0.804335 | 2.269821e-49 | 1.167227e-46 |
| MsG0180000334.01 | MsG0880043479.01 | 0.823610 | 1.262344e-53 | 1.092236e-50 |
| MsG0180000335.01 | MsG0880043479.01 | 0.842377 | 2.684329e-58 | 4.062486e-55 |
| MsG0180000402.01 | MsG0880043479.01 | 0.804300 | 2.308006e-49 | 1.185801e-46 |
| MsG0180000470.01 | MsG0880043479.01 | 0.894037 | 3.594022e-75 | 3.512479e-71 |
| MsG0180000550.01 | MsG0880043479.01 | 0.808487 | 3.023432e-50 | 1.730955e-47 |
| MsG0180000555.01 | MsG0880043479.01 | 0.801370 | 9.295537e-49 | 4.431707e-46 |
| MsG0180000650.01 | MsG0880043479.01 | 0.816334 | 5.833054e-52 | 4.121759e-49 |
| MsG0180000652.01 | MsG0880043479.01 | 0.800619 | 1.323870e-48 | 6.192648e-46 |
| MsG0180000702.01 | MsG0880043479.01 | 0.867624 | 1.193323e-65 | 4.193912e-62 |
| MsG0180000703.01 | MsG0880043479.01 | 0.828476 | 8.803021e-55 | 8.759582e-52 |
| MsG0180000777.01 | MsG0880043479.01 | 0.820065 | 8.351515e-53 | 6.540648e-50 |
| MsG0180000808.01 | MsG0880043479.01 | 0.813468 | 2.520623e-51 | 1.647514e-48 |
| MsG0180000828.01 | MsG0880043479.01 | 0.833583 | 4.905521e-56 | 5.673870e-53 |
| MsG0180000836.01 | MsG0880043479.01 | 0.849111 | 3.988136e-60 | 7.481668e-57 |
| MsG0180000914.01 | MsG0880043479.01 | 0.834901 | 2.292594e-56 | 2.758524e-53 |
| MsG0180001063.01 | MsG0880043479.01 | 0.840191 | 1.009046e-57 | 1.426402e-54 |
| MsG0180001141.01 | MsG0880043479.01 | 0.825709 | 4.043282e-54 | 3.714008e-51 |
| MsG0180001153.01 | MsG0880043479.01 | 0.809034 | 2.309718e-50 | 1.341526e-47 |
| MsG0180001173.01 | MsG0880043479.01 | 0.820882 | 5.424139e-53 | 4.345245e-50 |
| MsG0180001566.01 | MsG0880043479.01 | 0.800738 | 1.251948e-48 | 5.873936e-46 |
| MsG0180001662.01 | MsG0880043479.01 | 0.822853 | 1.896909e-53 | 1.606604e-50 |
| MsG0180001886.01 | MsG0880043479.01 | 0.806845 | 6.748950e-50 | 3.701725e-47 |
| MsG0180001892.01 | MsG0880043479.01 | 0.867971 | 9.231431e-66 | 3.283617e-62 |
| MsG0180001971.01 | MsG0880043479.01 | 0.807309 | 5.381943e-50 | 2.987755e-47 |
| MsG0180002071.01 | MsG0880043479.01 | 0.803123 | 4.051798e-49 | 2.019614e-46 |
| MsG0180002195.01 | MsG0880043479.01 | 0.803612 | 3.208570e-49 | 1.619613e-46 |
| MsG0180002259.01 | MsG0880043479.01 | 0.835763 | 1.388399e-56 | 1.714457e-53 |
| MsG0180002282.01 | MsG0880043479.01 | 0.836535 | 8.840760e-57 | 1.117306e-53 |
| MsG0180002377.01 | MsG0880043479.01 | 0.824501 | 7.799669e-54 | 6.921093e-51 |
| MsG0180002492.01 | MsG0880043479.01 | 0.840877 | 6.671675e-58 | 9.634014e-55 |
| MsG0180002547.01 | MsG0880043479.01 | 0.807869 | 4.094847e-50 | 2.306398e-47 |
| MsG0180002794.01 | MsG0880043479.01 | 0.801982 | 6.962629e-49 | 3.371106e-46 |
| MsG0180002842.01 | MsG0880043479.01 | 0.801986 | 6.949237e-49 | 3.365034e-46 |
| MsG0180002870.01 | MsG0880043479.01 | 0.811441 | 6.989958e-51 | 4.327364e-48 |
| MsG0180002895.01 | MsG0880043479.01 | 0.864968 | 8.299963e-65 | 2.655439e-61 |
| MsG0180002952.01 | MsG0880043479.01 | 0.836400 | 9.565583e-57 | 1.204102e-53 |
| MsG0180003031.01 | MsG0880043479.01 | 0.805439 | 1.334322e-49 | 7.059408e-47 |
| MsG0180003097.01 | MsG0880043479.01 | 0.803195 | 3.914899e-49 | 1.955101e-46 |
| MsG0180003188.01 | MsG0880043479.01 | 0.833668 | 4.673189e-56 | 5.418729e-53 |
| MsG0180003327.01 | MsG0880043479.01 | 0.806289 | 8.841236e-50 | 4.780711e-47 |
| MsG0180003361.01 | MsG0880043479.01 | 0.802738 | 4.864817e-49 | 2.401391e-46 |
| MsG0180003371.01 | MsG0880043479.01 | 0.800929 | 1.144258e-48 | 5.394972e-46 |
| MsG0180003455.01 | MsG0880043479.01 | 0.849531 | 3.045862e-60 | 5.791085e-57 |
| MsG0180003669.01 | MsG0880043479.01 | 0.846914 | 1.609839e-59 | 2.813581e-56 |
| MsG0180003673.01 | MsG0880043479.01 | 0.807584 | 4.706857e-50 | 2.631411e-47 |
| MsG0180003686.01 | MsG0880043479.01 | 0.812960 | 3.259102e-51 | 2.100780e-48 |
| MsG0180003773.01 | MsG0880043479.01 | 0.837899 | 3.958993e-57 | 5.215944e-54 |
| MsG0180003786.01 | MsG0880043479.01 | 0.808767 | 2.633870e-50 | 1.518926e-47 |
| MsG0180003797.01 | MsG0880043479.01 | 0.808862 | 2.514205e-50 | 1.453584e-47 |
| MsG0180003810.01 | MsG0880043479.01 | 0.803929 | 2.756955e-49 | 1.403129e-46 |
| MsG0180003822.01 | MsG0880043479.01 | 0.805047 | 1.611669e-49 | 8.441383e-47 |
| MsG0180003920.01 | MsG0880043479.01 | 0.839974 | 1.149143e-57 | 1.613683e-54 |
| MsG0180003943.01 | MsG0880043479.01 | 0.821344 | 4.244278e-53 | 3.443988e-50 |
| MsG0180003951.01 | MsG0880043479.01 | 0.841267 | 5.269769e-58 | 7.701723e-55 |
| MsG0180004152.01 | MsG0880043479.01 | 0.803884 | 2.816995e-49 | 1.431990e-46 |
| MsG0180004264.01 | MsG0880043479.01 | 0.861742 | 8.283385e-64 | 2.367543e-60 |
| MsG0180004275.01 | MsG0880043479.01 | 0.812808 | 3.517948e-51 | 2.258517e-48 |
| MsG0180004295.01 | MsG0880043479.01 | 0.814888 | 1.224590e-51 | 8.316830e-49 |
| MsG0180004331.01 | MsG0880043479.01 | 0.833734 | 4.499259e-56 | 5.227340e-53 |
| MsG0180004389.01 | MsG0880043479.01 | 0.857207 | 1.909578e-62 | 4.676607e-59 |
| MsG0180004463.01 | MsG0880043479.01 | 0.844485 | 7.344799e-59 | 1.187539e-55 |
| MsG0180004465.01 | MsG0880043479.01 | 0.817535 | 3.136289e-52 | 2.290058e-49 |
| MsG0180004481.01 | MsG0880043479.01 | 0.839289 | 1.732295e-57 | 2.381202e-54 |
| MsG0180004482.01 | MsG0880043479.01 | 0.847714 | 9.707975e-60 | 1.740881e-56 |
| MsG0180004675.01 | MsG0880043479.01 | 0.806322 | 8.703605e-50 | 4.710078e-47 |
| MsG0180004707.01 | MsG0880043479.01 | 0.800187 | 1.620903e-48 | 7.499433e-46 |
| MsG0180004743.01 | MsG0880043479.01 | 0.817834 | 2.684852e-52 | 1.976637e-49 |
| MsG0180004754.01 | MsG0880043479.01 | 0.804327 | 2.278690e-49 | 1.171526e-46 |
| MsG0180004765.01 | MsG0880043479.01 | 0.875518 | 2.893935e-68 | 1.354971e-64 |
| MsG0180004769.01 | MsG0880043479.01 | 0.806129 | 9.556384e-50 | 5.146266e-47 |
| MsG0180004779.01 | MsG0880043479.01 | 0.816165 | 6.363203e-52 | 4.475427e-49 |
| MsG0180004802.01 | MsG0880043479.01 | 0.827396 | 1.601291e-54 | 1.544194e-51 |
| MsG0180004926.01 | MsG0880043479.01 | 0.819080 | 1.401495e-52 | 1.067804e-49 |
| MsG0180004928.01 | MsG0880043479.01 | 0.833572 | 4.937100e-56 | 5.708327e-53 |
| MsG0180004943.01 | MsG0880043479.01 | 0.830299 | 3.175371e-55 | 3.331935e-52 |
| MsG0180004970.01 | MsG0880043479.01 | 0.820047 | 8.428724e-53 | 6.597931e-50 |
| MsG0180004975.01 | MsG0880043479.01 | 0.825550 | 4.409230e-54 | 4.031786e-51 |
| MsG0180005049.01 | MsG0880043479.01 | 0.804403 | 2.196915e-49 | 1.131676e-46 |
| MsG0180005050.01 | MsG0880043479.01 | 0.826798 | 2.226609e-54 | 2.109677e-51 |
| MsG0180005153.01 | MsG0880043479.01 | 0.854208 | 1.434448e-61 | 3.179944e-58 |
| MsG0180005162.01 | MsG0880043479.01 | 0.804138 | 2.494437e-49 | 1.276263e-46 |
| MsG0180005185.01 | MsG0880043479.01 | 0.819203 | 1.313768e-52 | 1.004382e-49 |
| MsG0180005233.01 | MsG0880043479.01 | 0.826106 | 3.254685e-54 | 3.023582e-51 |
| MsG0180005250.01 | MsG0880043479.01 | 0.873559 | 1.338296e-67 | 5.833986e-64 |
| MsG0180005443.01 | MsG0880043479.01 | 0.802821 | 4.676977e-49 | 2.313633e-46 |
| MsG0180005445.01 | MsG0880043479.01 | 0.851609 | 7.939925e-61 | 1.615816e-57 |
| MsG0180005480.01 | MsG0880043479.01 | 0.808985 | 2.366339e-50 | 1.372585e-47 |
| MsG0180005575.01 | MsG0880043479.01 | 0.851749 | 7.245845e-61 | 1.481240e-57 |
| MsG0180005664.01 | MsG0880043479.01 | 0.820543 | 6.489321e-53 | 5.149597e-50 |
| MsG0180005708.01 | MsG0880043479.01 | 0.806833 | 6.789372e-50 | 3.722638e-47 |
| MsG0180005730.01 | MsG0880043479.01 | 0.811499 | 6.790644e-51 | 4.210406e-48 |
| MsG0180005763.01 | MsG0880043479.01 | 0.839858 | 1.231935e-57 | 1.723389e-54 |
| MsG0180005800.01 | MsG0880043479.01 | 0.805630 | 1.216611e-49 | 6.468396e-47 |
| MsG0180005993.01 | MsG0880043479.01 | 0.804501 | 2.095825e-49 | 1.082318e-46 |
| MsG0180006017.01 | MsG0880043479.01 | 0.829888 | 4.000726e-55 | 4.149015e-52 |
| MsG0180006024.01 | MsG0880043479.01 | 0.810383 | 1.184604e-50 | 7.129920e-48 |
| MsG0180006134.01 | MsG0880043479.01 | 0.819193 | 1.320362e-52 | 1.009141e-49 |
| MsG0180006207.01 | MsG0880043479.01 | 0.820648 | 6.136751e-53 | 4.883680e-50 |
| MsG0180006224.01 | MsG0880043479.01 | 0.826831 | 2.185964e-54 | 2.073198e-51 |
| MsG0180006257.01 | MsG0880043479.01 | 0.820779 | 5.728414e-53 | 4.575615e-50 |
| MsG0180006261.01 | MsG0880043479.01 | 0.822660 | 2.103924e-53 | 1.772176e-50 |
| MsG0280006299.01 | MsG0880043479.01 | 0.856500 | 3.084063e-62 | 7.377437e-59 |
| MsG0280006324.01 | MsG0880043479.01 | 0.843660 | 1.222402e-58 | 1.926090e-55 |
| MsG0280006375.01 | MsG0880043479.01 | 0.805666 | 1.195894e-49 | 6.364048e-47 |
| MsG0280006405.01 | MsG0880043479.01 | 0.851323 | 9.564185e-61 | 1.928872e-57 |
| MsG0280006406.01 | MsG0880043479.01 | 0.803624 | 3.189936e-49 | 1.610692e-46 |
| MsG0780040261.01 | MsG0880043479.01 | 0.800879 | 1.171701e-48 | 5.517399e-46 |
| MsG0780040262.01 | MsG0880043479.01 | 0.828235 | 1.006157e-54 | 9.941813e-52 |
| MsG0780040529.01 | MsG0880043479.01 | 0.802065 | 6.695492e-49 | 3.248733e-46 |
| MsG0780040576.01 | MsG0880043479.01 | -0.813649 | 2.299955e-51 | 1.510605e-48 |
| MsG0780040591.01 | MsG0880043479.01 | 0.813803 | 2.126973e-51 | 1.402852e-48 |
| MsG0780040596.01 | MsG0880043479.01 | 0.814413 | 1.560347e-51 | 1.046342e-48 |
| MsG0780040604.01 | MsG0880043479.01 | 0.820377 | 7.084892e-53 | 5.596760e-50 |
| MsG0780040669.01 | MsG0880043479.01 | 0.837328 | 5.546014e-57 | 7.179631e-54 |
| MsG0780040704.01 | MsG0880043479.01 | 0.857617 | 1.444311e-62 | 3.586483e-59 |
| MsG0780040734.01 | MsG0880043479.01 | 0.805310 | 1.419733e-49 | 7.486522e-47 |
| MsG0780040788.01 | MsG0880043479.01 | 0.823803 | 1.137730e-53 | 9.898516e-51 |
| MsG0780040841.01 | MsG0880043479.01 | 0.833337 | 5.651476e-56 | 6.489343e-53 |
| MsG0780040888.01 | MsG0880043479.01 | 0.824777 | 6.714316e-54 | 6.006228e-51 |
| MsG0780040926.01 | MsG0880043479.01 | 0.833955 | 3.962026e-56 | 4.634423e-53 |
| MsG0780041016.01 | MsG0880043479.01 | 0.801053 | 1.079342e-48 | 5.105078e-46 |
| MsG0780041033.01 | MsG0880043479.01 | 0.804635 | 1.965200e-49 | 1.018394e-46 |
| MsG0780041137.01 | MsG0880043479.01 | 0.805953 | 1.040715e-49 | 5.579352e-47 |
| MsG0780041305.01 | MsG0880043479.01 | 0.835367 | 1.748496e-56 | 2.133761e-53 |
| MsG0780041386.01 | MsG0880043479.01 | 0.829367 | 5.356790e-55 | 5.471647e-52 |
| MsG0780041387.01 | MsG0880043479.01 | 0.813426 | 2.574770e-51 | 1.680901e-48 |
| MsG0780041402.01 | MsG0880043479.01 | 0.808889 | 2.480856e-50 | 1.435293e-47 |
| MsG0780041416.01 | MsG0880043479.01 | 0.850881 | 1.274650e-60 | 2.533296e-57 |
| MsG0780041435.01 | MsG0880043479.01 | 0.806361 | 8.537943e-50 | 4.625014e-47 |
| MsG0780041440.01 | MsG0880043479.01 | 0.826447 | 2.699105e-54 | 2.531986e-51 |
| MsG0780041456.01 | MsG0880043479.01 | 0.843688 | 1.201098e-58 | 1.894150e-55 |
| MsG0780041475.01 | MsG0880043479.01 | 0.810668 | 1.028264e-50 | 6.236490e-48 |
| MsG0780041535.01 | MsG0880043479.01 | 0.831072 | 2.053460e-55 | 2.204300e-52 |
| MsG0780041559.01 | MsG0880043479.01 | 0.811120 | 8.205423e-51 | 5.036774e-48 |
| MsG0780041584.01 | MsG0880043479.01 | 0.808027 | 3.789086e-50 | 2.143152e-47 |
| MsG0780041667.01 | MsG0880043479.01 | 0.812061 | 5.124575e-51 | 3.225085e-48 |
| MsG0880041836.01 | MsG0880043479.01 | 0.815839 | 7.524034e-52 | 5.244581e-49 |
| MsG0880041860.01 | MsG0880043479.01 | 0.819350 | 1.216129e-52 | 9.334729e-50 |
| MsG0880041861.01 | MsG0880043479.01 | 0.805186 | 1.507696e-49 | 7.924899e-47 |
| MsG0880041863.01 | MsG0880043479.01 | 0.842062 | 3.251197e-58 | 4.871478e-55 |
| MsG0880041986.01 | MsG0880043479.01 | 0.832815 | 7.619626e-56 | 8.612715e-53 |
| MsG0880042128.01 | MsG0880043479.01 | 0.819627 | 1.051698e-52 | 8.135510e-50 |
| MsG0880042129.01 | MsG0880043479.01 | 0.820905 | 5.357176e-53 | 4.294329e-50 |
| MsG0880042161.01 | MsG0880043479.01 | 0.818447 | 1.951166e-52 | 1.461059e-49 |
| MsG0880042294.01 | MsG0880043479.01 | 0.807192 | 5.700577e-50 | 3.154853e-47 |
| MsG0880042311.01 | MsG0880043479.01 | 0.831534 | 1.580506e-55 | 1.720172e-52 |
| MsG0880042348.01 | MsG0880043479.01 | 0.806611 | 7.561960e-50 | 4.122514e-47 |
| MsG0880042434.01 | MsG0880043479.01 | 0.806917 | 6.516259e-50 | 3.580677e-47 |
| MsG0880042518.01 | MsG0880043479.01 | 0.844213 | 8.690743e-59 | 1.393235e-55 |
| MsG0880042520.01 | MsG0880043479.01 | 0.843066 | 1.760638e-58 | 2.722295e-55 |
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| MsG0780038386.01 | MsG0880043479.01 | 0.828780 | 7.431364e-55 | 7.459856e-52 |
| MsG0780038391.01 | MsG0880043479.01 | 0.818247 | 2.165303e-52 | 1.612204e-49 |
| MsG0780038401.01 | MsG0880043479.01 | 0.881285 | 2.726023e-70 | 1.587454e-66 |
| MsG0780038424.01 | MsG0880043479.01 | 0.842681 | 2.228848e-58 | 3.405008e-55 |
| MsG0780038439.01 | MsG0880043479.01 | 0.860115 | 2.586197e-63 | 6.992007e-60 |
| MsG0780038443.01 | MsG0880043479.01 | 0.843452 | 1.389425e-58 | 2.174869e-55 |
| MsG0780038602.01 | MsG0880043479.01 | 0.829932 | 3.903060e-55 | 4.052621e-52 |
| MsG0780038603.01 | MsG0880043479.01 | 0.829576 | 4.763959e-55 | 4.895342e-52 |
| MsG0780038688.01 | MsG0880043479.01 | 0.842697 | 2.206758e-58 | 3.373058e-55 |
| MsG0780038690.01 | MsG0880043479.01 | 0.822497 | 2.294956e-53 | 1.924164e-50 |
| MsG0780038691.01 | MsG0880043479.01 | 0.851565 | 8.171941e-61 | 1.660756e-57 |
| MsG0780038907.01 | MsG0880043479.01 | 0.839004 | 2.053377e-57 | 2.798130e-54 |
| MsG0780039059.01 | MsG0880043479.01 | 0.806689 | 7.281423e-50 | 3.977521e-47 |
| MsG0780039063.01 | MsG0880043479.01 | 0.811158 | 8.053805e-51 | 4.948482e-48 |
| MsG0780039137.01 | MsG0880043479.01 | 0.811018 | 8.633352e-51 | 5.285687e-48 |
| MsG0780039139.01 | MsG0880043479.01 | 0.800324 | 1.520109e-48 | 7.057897e-46 |
| MsG0780039144.01 | MsG0880043479.01 | 0.801788 | 7.632882e-49 | 3.677561e-46 |
| MsG0780039170.01 | MsG0880043479.01 | 0.846575 | 1.992246e-59 | 3.444244e-56 |
| MsG0780039171.01 | MsG0880043479.01 | 0.820107 | 8.166438e-53 | 6.403831e-50 |
| MsG0780039178.01 | MsG0880043479.01 | 0.817877 | 2.624771e-52 | 1.934667e-49 |
| MsG0780039243.01 | MsG0880043479.01 | 0.859863 | 3.081274e-63 | 8.258074e-60 |
| MsG0780039252.01 | MsG0880043479.01 | 0.829824 | 4.147359e-55 | 4.293616e-52 |
| MsG0780039423.01 | MsG0880043479.01 | 0.821937 | 3.095296e-53 | 2.553930e-50 |
| MsG0780039443.01 | MsG0880043479.01 | 0.874329 | 7.351308e-68 | 3.295519e-64 |
| MsG0780039520.01 | MsG0880043479.01 | 0.821860 | 3.225674e-53 | 2.655831e-50 |
| MsG0780039522.01 | MsG0880043479.01 | 0.825037 | 5.830503e-54 | 5.254485e-51 |
| MsG0780039527.01 | MsG0880043479.01 | 0.808473 | 3.044560e-50 | 1.742444e-47 |
| MsG0780039655.01 | MsG0880043479.01 | 0.825396 | 4.796401e-54 | 4.366514e-51 |
| MsG0780039832.01 | MsG0880043479.01 | 0.805922 | 1.056411e-49 | 5.658957e-47 |
| MsG0780039866.01 | MsG0880043479.01 | 0.828247 | 9.997019e-55 | 9.881256e-52 |
| MsG0780039867.01 | MsG0880043479.01 | -0.822470 | 2.328419e-53 | 1.950690e-50 |
| MsG0780040044.01 | MsG0880043479.01 | 0.852119 | 5.689581e-61 | 1.176873e-57 |
| MsG0780040057.01 | MsG0880043479.01 | 0.866760 | 2.251723e-65 | 7.676832e-62 |
| MsG0780040074.01 | MsG0880043479.01 | 0.832939 | 7.100125e-56 | 8.055387e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043479.01.T01 | MTR_8g036220 | 93.182 | 44 | 3 | 0 | 1 | 44 | 125 | 168 | 1.90e-22 | 85.5 |
| MsG0880043479.01.T01 | MTR_7g051940 | 68.182 | 44 | 14 | 0 | 1 | 44 | 122 | 165 | 9.16e-15 | 65.1 |
| MsG0880043479.01.T01 | MTR_7g405790 | 65.909 | 44 | 15 | 0 | 1 | 44 | 124 | 167 | 6.72e-14 | 62.8 |
| MsG0880043479.01.T01 | MTR_8g089985 | 54.902 | 51 | 23 | 0 | 1 | 51 | 126 | 176 | 1.95e-12 | 58.9 |
| MsG0880043479.01.T01 | MTR_1g078200 | 69.048 | 42 | 13 | 0 | 1 | 42 | 123 | 164 | 3.37e-12 | 58.5 |
| MsG0880043479.01.T01 | MTR_0262s0050 | 50.980 | 51 | 25 | 0 | 1 | 51 | 124 | 174 | 4.24e-12 | 58.2 |
| MsG0880043479.01.T01 | MTR_3g086980 | 52.941 | 51 | 24 | 0 | 1 | 51 | 125 | 175 | 6.48e-12 | 57.8 |
| MsG0880043479.01.T01 | MTR_1g052475 | 49.020 | 51 | 26 | 0 | 1 | 51 | 124 | 174 | 7.26e-12 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043479.01.T01 | AT5G46025 | 57.143 | 56 | 24 | 0 | 1 | 56 | 54 | 109 | 2.85e-14 | 61.6 |
| MsG0880043479.01.T01 | AT5G47960 | 56.863 | 51 | 22 | 0 | 1 | 51 | 124 | 174 | 3.26e-14 | 63.9 |
| MsG0880043479.01.T01 | AT1G05810 | 57.143 | 56 | 23 | 1 | 1 | 55 | 121 | 176 | 1.00e-13 | 62.4 |
| MsG0880043479.01.T01 | AT2G31680 | 65.909 | 44 | 15 | 0 | 1 | 44 | 121 | 164 | 1.32e-13 | 62.0 |
| MsG0880043479.01.T01 | AT1G05810 | 63.636 | 44 | 16 | 0 | 1 | 44 | 167 | 210 | 1.78e-13 | 62.4 |
| MsG0880043479.01.T01 | AT2G43130 | 63.636 | 44 | 16 | 0 | 1 | 44 | 121 | 164 | 1.98e-13 | 61.6 |
| MsG0880043479.01.T01 | AT3G07410 | 61.364 | 44 | 17 | 0 | 1 | 44 | 121 | 164 | 6.83e-13 | 60.1 |
| MsG0880043479.01.T01 | AT5G47520 | 66.667 | 42 | 14 | 0 | 1 | 42 | 123 | 164 | 2.49e-12 | 58.9 |
| MsG0880043479.01.T01 | AT4G39990 | 58.140 | 43 | 18 | 0 | 1 | 43 | 126 | 168 | 3.12e-12 | 58.5 |
| MsG0880043479.01.T01 | AT4G18430 | 55.814 | 43 | 19 | 0 | 1 | 43 | 122 | 164 | 4.45e-12 | 58.2 |
| MsG0880043479.01.T01 | AT3G12160 | 50.980 | 51 | 25 | 0 | 1 | 51 | 124 | 174 | 6.45e-12 | 57.8 |
| MsG0880043479.01.T01 | AT1G18200 | 65.116 | 43 | 15 | 0 | 1 | 43 | 122 | 164 | 1.78e-11 | 56.6 |
| MsG0880043479.01.T01 | AT5G65270 | 49.020 | 51 | 26 | 0 | 1 | 51 | 126 | 176 | 1.94e-11 | 56.2 |
Find 8 sgRNAs with CRISPR-Local
Find 8 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTCGATAGGCACTTCT+CGG | 0.362301 | 8:+25389629 | None:intergenic |
| AACATAGCTGTCATGCTTGT+TGG | 0.371700 | 8:-25389676 | None:intergenic |
| ACATATTGTGAGAGAAGAAC+AGG | 0.437269 | 8:+25389528 | None:intergenic |
| AAGTCTTTGGCTTCCTCGAT+AGG | 0.469086 | 8:+25389619 | None:intergenic |
| GTGAGAGAAGAACAGGAAAG+TGG | 0.591349 | 8:+25389535 | None:intergenic |
| GCACTTCTCGGATTGAACTC+AGG | 0.592554 | 8:+25389641 | None:intergenic |
| AAAGACTTAGCAAAACAGAA+AGG | 0.614557 | 8:-25389604 | MsG0880043479.01.T01:CDS |
| AATCCGAGAAGTGCCTATCG+AGG | 0.678608 | 8:-25389632 | MsG0880043479.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAAGACTTAGCAAAACAGAA+AGG | - | Chr8:25389576-25389595 | MsG0880043479.01.T01:CDS | 30.0% | |
| ! | TTTCTGTTTTGCTAAGTCTT+TGG | + | Chr8:25389577-25389596 | None:intergenic | 30.0% |
| ACATATTGTGAGAGAAGAAC+AGG | + | Chr8:25389655-25389674 | None:intergenic | 35.0% | |
| GTGAGAGAAGAACAGGAAAG+TGG | + | Chr8:25389648-25389667 | None:intergenic | 45.0% | |
| ! | AAGTCTTTGGCTTCCTCGAT+AGG | + | Chr8:25389564-25389583 | None:intergenic | 45.0% |
| CTTCCTCGATAGGCACTTCT+CGG | + | Chr8:25389554-25389573 | None:intergenic | 50.0% | |
| GCACTTCTCGGATTGAACTC+AGG | + | Chr8:25389542-25389561 | None:intergenic | 50.0% | |
| !! | AATCCGAGAAGTGCCTATCG+AGG | - | Chr8:25389548-25389567 | MsG0880043479.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 25389516 | 25389686 | 25389516 | ID=MsG0880043479.01;Name=MsG0880043479.01 |
| Chr8 | mRNA | 25389516 | 25389686 | 25389516 | ID=MsG0880043479.01.T01;Parent=MsG0880043479.01;Name=MsG0880043479.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|56 |
| Chr8 | exon | 25389516 | 25389686 | 25389516 | ID=MsG0880043479.01.T01:exon:1154;Parent=MsG0880043479.01.T01 |
| Chr8 | CDS | 25389516 | 25389686 | 25389516 | ID=MsG0880043479.01.T01:cds;Parent=MsG0880043479.01.T01 |
| Gene Sequence |
| Protein sequence |
