AlfalfaGEDB | MsG0280006567.01

M. sativa cultivar ZhongmuNo.1 / MsG0280006567.01

KEGG: -
GO: -
PFAM: PF06749

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006567.01.T02	XP_003593382.3	96.454	141	4	1	1	141	54	193	7.36E-94	279
MsG0280006567.01.T01	XP_003593382.3	96.61	177	5	1	1	177	18	193	1.24E-121	351

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006567.01.T01	G7IK23	96.610	177	5	1	1	177	1	176	1.26e-121	350
MsG0280006567.01.T02	G7IK23	96.454	141	4	1	1	141	37	176	4.01e-94	278

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048404.01	MsG0280006567.01	0.803344	3.646512e-49	1.827960e-46
MsG0080048856.01	MsG0280006567.01	0.807243	5.560021e-50	3.081260e-47
MsG0080048952.01	MsG0280006567.01	0.816893	4.371676e-52	3.136541e-49
MsG0180000065.01	MsG0280006567.01	0.813652	2.296279e-51	1.508356e-48
MsG0180000145.01	MsG0280006567.01	0.802519	5.399683e-49	2.650366e-46
MsG0180000470.01	MsG0280006567.01	0.820378	7.078843e-53	5.592261e-50
MsG0180000650.01	MsG0280006567.01	0.805123	1.553839e-49	8.154570e-47
MsG0180000914.01	MsG0280006567.01	0.823545	1.307626e-53	1.129273e-50
MsG0180001566.01	MsG0280006567.01	0.805529	1.277550e-49	6.774568e-47
MsG0180001892.01	MsG0280006567.01	0.808077	3.697115e-50	2.093921e-47
MsG0180003797.01	MsG0280006567.01	0.811986	5.320897e-51	3.341903e-48
MsG0180004389.01	MsG0280006567.01	0.820075	8.305198e-53	6.506442e-50
MsG0180004465.01	MsG0280006567.01	0.812634	3.840451e-51	2.454551e-48
MsG0180004743.01	MsG0280006567.01	0.802378	5.772716e-49	2.823586e-46
MsG0180004765.01	MsG0280006567.01	0.847894	8.660722e-60	1.561912e-56
MsG0180004802.01	MsG0280006567.01	0.803710	3.061254e-49	1.549074e-46
MsG0180005153.01	MsG0280006567.01	0.818817	1.608019e-52	1.216290e-49
MsG0180005393.01	MsG0280006567.01	0.811048	8.506018e-51	5.211600e-48
MsG0180005445.01	MsG0280006567.01	0.802033	6.795654e-49	3.294656e-46
MsG0180005730.01	MsG0280006567.01	0.809099	2.236851e-50	1.301521e-47
MsG0280006299.01	MsG0280006567.01	0.800410	1.460144e-48	6.794246e-46
MsG0280006461.01	MsG0280006567.01	0.814551	1.454333e-51	9.788531e-49
MsG0280006491.01	MsG0280006567.01	0.807001	6.256883e-50	3.445542e-47
MsG0280006567.01	MsG0280006910.01	0.816551	5.218212e-52	3.708786e-49
MsG0280006567.01	MsG0280007529.01	0.834539	2.827941e-56	3.366344e-53
MsG0280006567.01	MsG0280007547.01	0.817538	3.130287e-52	2.285941e-49
MsG0280006567.01	MsG0280007955.01	0.815495	8.979356e-52	6.200773e-49
MsG0280006567.01	MsG0280008377.01	0.816512	5.322946e-52	3.779290e-49
MsG0280006567.01	MsG0280008457.01	0.800105	1.684529e-48	7.777586e-46
MsG0280006567.01	MsG0280008765.01	0.830574	2.720723e-55	2.877751e-52
MsG0280006567.01	MsG0280009421.01	0.810422	1.161780e-50	6.999820e-48
MsG0280006567.01	MsG0280009748.01	0.828156	1.051547e-54	1.036676e-51
MsG0280006567.01	MsG0280010109.01	0.807835	4.162322e-50	2.342421e-47
MsG0280006567.01	MsG0280010184.01	0.802246	6.145597e-49	2.995776e-46
MsG0280006567.01	MsG0280010349.01	0.817061	4.009102e-52	2.889724e-49
MsG0280006567.01	MsG0280010366.01	0.806526	7.881229e-50	4.287306e-47
MsG0280006567.01	MsG0280010698.01	0.803326	3.677333e-49	1.842563e-46
MsG0280006567.01	MsG0280010722.01	0.843626	1.248089e-58	1.964549e-55
MsG0280006567.01	MsG0280010778.01	0.835950	1.244828e-56	1.545733e-53
MsG0280006567.01	MsG0280010788.01	0.804151	2.479403e-49	1.268996e-46
MsG0280006567.01	MsG0280010813.01	0.800264	1.563626e-48	7.248755e-46
MsG0280006567.01	MsG0280011101.01	0.803071	4.153012e-49	2.067280e-46
MsG0280006567.01	MsG0280011305.01	0.834237	3.366358e-56	3.970827e-53
MsG0280006567.01	MsG0380011648.01	0.806791	6.930510e-50	3.795830e-47
MsG0280006567.01	MsG0380012034.01	0.805938	1.048445e-49	5.618594e-47
MsG0280006567.01	MsG0380012067.01	0.818741	1.673467e-52	1.263158e-49
MsG0280006567.01	MsG0380012460.01	0.827360	1.633582e-54	1.573707e-51
MsG0280006567.01	MsG0380013176.01	0.822124	2.801577e-53	2.323948e-50
MsG0280006567.01	MsG0380013183.01	0.804673	1.929713e-49	1.001013e-46
MsG0280006567.01	MsG0380013363.01	0.822519	2.268910e-53	1.903561e-50
MsG0280006567.01	MsG0380013475.01	0.813108	3.024159e-51	1.957098e-48
MsG0280006567.01	MsG0380013549.01	0.807913	4.007729e-50	2.259875e-47
MsG0280006567.01	MsG0380014097.01	0.830766	2.441501e-55	2.597272e-52
MsG0280006567.01	MsG0380014495.01	0.809470	1.862765e-50	1.094597e-47
MsG0280006567.01	MsG0380014498.01	0.803360	3.618096e-49	1.814441e-46
MsG0280006567.01	MsG0380014537.01	0.833910	4.064743e-56	4.748493e-53
MsG0280006567.01	MsG0380014948.01	0.810975	8.823124e-51	5.395823e-48
MsG0280006567.01	MsG0380014949.01	0.813322	2.714303e-51	1.766984e-48
MsG0280006567.01	MsG0380015196.01	0.808979	2.372936e-50	1.376209e-47
MsG0280006567.01	MsG0380015332.01	0.819972	8.768395e-53	6.849279e-50
MsG0280006567.01	MsG0380015440.01	0.806318	8.718952e-50	4.717902e-47
MsG0280006567.01	MsG0380015555.01	0.823582	1.282021e-53	1.108380e-50
MsG0280006567.01	MsG0380015631.01	0.814078	1.849802e-51	1.229146e-48
MsG0280006567.01	MsG0380015677.01	0.800566	1.357286e-48	6.340324e-46
MsG0280006567.01	MsG0380015944.01	0.809968	1.455737e-50	8.667666e-48
MsG0280006567.01	MsG0380016357.01	0.818072	2.371922e-52	1.757588e-49
MsG0280006567.01	MsG0380016407.01	0.822951	1.799859e-53	1.528579e-50
MsG0280006567.01	MsG0380016529.01	0.815204	1.042354e-51	7.140039e-49
MsG0280006567.01	MsG0380017040.01	0.806485	8.039725e-50	4.368988e-47
MsG0280006567.01	MsG0380018075.01	0.809588	1.756830e-50	1.035667e-47
MsG0280006567.01	MsG0480018251.01	0.807478	4.957226e-50	2.763972e-47
MsG0280006567.01	MsG0480018313.01	0.800005	1.765252e-48	8.129580e-46
MsG0280006567.01	MsG0480019297.01	0.800476	1.415728e-48	6.598254e-46
MsG0280006567.01	MsG0480019453.01	0.813336	2.695211e-51	1.755214e-48
MsG0280006567.01	MsG0480020447.01	0.801166	1.023429e-48	4.854241e-46
MsG0280006567.01	MsG0480020739.01	0.815186	1.051980e-51	7.202378e-49
MsG0280006567.01	MsG0480021056.01	0.810528	1.102395e-50	6.660751e-48
MsG0280006567.01	MsG0480022855.01	0.815504	8.936310e-52	6.172621e-49
MsG0280006567.01	MsG0480023163.01	0.804919	1.714416e-49	8.950707e-47
MsG0280006567.01	MsG0480023354.01	0.812141	4.920904e-51	3.103918e-48
MsG0280006567.01	MsG0480023463.01	0.808862	2.514063e-50	1.453513e-47
MsG0280006567.01	MsG0480023488.01	0.809410	1.918791e-50	1.125782e-47
MsG0280006567.01	MsG0480023489.01	0.809334	1.991902e-50	1.166281e-47
MsG0280006567.01	MsG0480023600.01	0.815485	9.026242e-52	6.231619e-49
MsG0280006567.01	MsG0480023835.01	0.805666	1.195848e-49	6.363809e-47
MsG0280006567.01	MsG0480023873.01	0.823655	1.232487e-53	1.067844e-50
MsG0280006567.01	MsG0580024197.01	0.810923	9.053472e-51	5.528846e-48
MsG0280006567.01	MsG0580024506.01	0.811055	8.478097e-51	5.195425e-48
MsG0280006567.01	MsG0580025899.01	0.804220	2.398547e-49	1.229731e-46
MsG0280006567.01	MsG0580025987.01	0.833580	4.914497e-56	5.683653e-53
MsG0280006567.01	MsG0580026086.01	0.825822	3.801304e-54	3.503011e-51
MsG0280006567.01	MsG0580026309.01	0.802084	6.633521e-49	3.220325e-46
MsG0280006567.01	MsG0580029008.01	0.808237	3.417829e-50	1.944013e-47
MsG0280006567.01	MsG0580029236.01	0.825377	4.846674e-54	4.409849e-51
MsG0280006567.01	MsG0680030674.01	0.803403	3.545237e-49	1.779996e-46
MsG0280006567.01	MsG0680030677.01	0.803144	4.011181e-49	2.000485e-46
MsG0280006567.01	MsG0680030880.01	0.828415	9.106283e-55	9.045641e-52
MsG0280006567.01	MsG0680030882.01	0.811250	7.689587e-51	4.736374e-48
MsG0280006567.01	MsG0680031360.01	0.809274	2.052256e-50	1.199678e-47
MsG0280006567.01	MsG0680031431.01	0.829923	3.922214e-55	4.071562e-52
MsG0280006567.01	MsG0680031488.01	0.818492	1.905195e-52	1.428286e-49
MsG0280006567.01	MsG0680032112.01	0.821904	3.150454e-53	2.597124e-50
MsG0280006567.01	MsG0680032157.01	0.807744	4.352068e-50	2.443500e-47
MsG0280006567.01	MsG0680034320.01	0.810767	9.787439e-51	5.951899e-48
MsG0280006567.01	MsG0680034739.01	0.817859	2.650467e-52	1.952633e-49
MsG0280006567.01	MsG0680034842.01	0.803080	4.135023e-49	2.058812e-46
MsG0280006567.01	MsG0680034890.01	0.815552	8.719449e-52	6.030487e-49
MsG0280006567.01	MsG0680035580.01	0.819791	9.646202e-53	7.497009e-50
MsG0280006567.01	MsG0780036201.01	0.805758	1.143751e-49	6.101334e-47
MsG0280006567.01	MsG0780036602.01	0.816296	5.948881e-52	4.199227e-49
MsG0280006567.01	MsG0780037054.01	0.806043	9.962838e-50	5.353397e-47
MsG0280006567.01	MsG0780037460.01	0.801918	7.175898e-49	3.468870e-46
MsG0280006567.01	MsG0780038401.01	0.831358	1.746316e-55	1.890592e-52
MsG0280006567.01	MsG0780038439.01	0.815632	8.370350e-52	5.802090e-49
MsG0280006567.01	MsG0780038690.01	0.820534	6.518270e-53	5.171266e-50
MsG0280006567.01	MsG0780038691.01	0.826330	2.878341e-54	2.691024e-51
MsG0280006567.01	MsG0780038935.01	0.800907	1.156499e-48	5.449664e-46
MsG0280006567.01	MsG0780039170.01	0.824056	9.926966e-54	8.697207e-51
MsG0280006567.01	MsG0780039243.01	0.810866	9.313137e-51	5.678626e-48
MsG0280006567.01	MsG0780039257.01	0.822587	2.186957e-53	1.838467e-50
MsG0280006567.01	MsG0780039443.01	0.825000	5.948412e-54	5.355215e-51
MsG0280006567.01	MsG0780039832.01	0.819971	8.774220e-53	6.853624e-50
MsG0280006567.01	MsG0780040669.01	0.821360	4.207570e-53	3.415645e-50
MsG0280006567.01	MsG0780041305.01	0.808504	2.998288e-50	1.717325e-47
MsG0280006567.01	MsG0780041475.01	0.812203	4.771777e-51	3.014862e-48
MsG0280006567.01	MsG0880042311.01	0.854226	1.416961e-61	3.143022e-58
MsG0280006567.01	MsG0880042520.01	0.813200	2.886396e-51	1.872688e-48
MsG0280006567.01	MsG0880043479.01	0.805307	1.422147e-49	7.498406e-47
MsG0280006567.01	MsG0880043480.01	0.825691	4.081984e-54	3.747706e-51
MsG0280006567.01	MsG0880045372.01	0.811654	6.284834e-51	3.912275e-48
MsG0280006567.01	MsG0880045765.01	0.815903	7.284390e-52	5.086285e-49
MsG0280006567.01	MsG0880046020.01	0.816448	5.502251e-52	3.899555e-49
MsG0280006567.01	MsG0880046264.01	0.801708	7.927305e-49	3.811594e-46
MsG0280006567.01	MsG0880047294.01	0.801147	1.032768e-48	4.896210e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006567.01.T02	MTR_2g010840	96.454	141	4	1	1	141	37	176	1.02e-97	278
MsG0280006567.01.T02	MTR_4g092130	72.868	129	34	1	1	129	37	164	5.67e-68	203
MsG0280006567.01.T02	MTR_2g089050	60.976	123	47	1	1	123	37	158	1.02e-50	159
MsG0280006567.01.T02	MTR_4g045673	57.724	123	51	1	1	123	37	158	8.16e-50	157
MsG0280006567.01.T01	MTR_2g010840	96.610	177	5	1	1	177	1	176	3.21e-125	350
MsG0280006567.01.T01	MTR_4g092130	73.333	165	43	1	1	165	1	164	2.88e-90	261
MsG0280006567.01.T01	MTR_2g089050	60.377	159	62	1	1	159	1	158	1.92e-68	205
MsG0280006567.01.T01	MTR_4g045673	57.862	159	66	1	1	159	1	158	1.78e-66	200

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006567.01.T02	AT4G21310	64.567	127	44	1	1	127	37	162	4.55e-59	181
MsG0280006567.01.T02	AT4G21310	64.800	125	43	1	3	127	1	124	3.73e-58	177
MsG0280006567.01.T02	AT2G32280	52.344	128	60	1	1	128	37	163	1.44e-49	156
MsG0280006567.01.T02	AT2G32280	52.344	128	60	1	1	128	37	163	1.44e-49	156
MsG0280006567.01.T02	AT1G11500	47.727	132	66	2	9	139	24	153	8.62e-38	126
MsG0280006567.01.T02	AT1G11500	47.727	132	66	2	9	139	57	186	1.05e-37	127
MsG0280006567.01.T02	AT1G11500	47.727	132	66	2	9	139	52	181	1.22e-37	127
MsG0280006567.01.T02	AT1G05291	33.871	124	73	4	6	124	50	169	3.40e-11	58.9
MsG0280006567.01.T01	AT4G21310	65.644	163	55	1	1	163	1	162	3.87e-79	233
MsG0280006567.01.T01	AT2G32280	51.829	164	78	1	1	164	1	163	4.22e-64	194
MsG0280006567.01.T01	AT2G32280	51.829	164	78	1	1	164	1	163	4.22e-64	194
MsG0280006567.01.T01	AT4G21310	64.800	125	43	1	39	163	1	124	1.01e-57	177
MsG0280006567.01.T01	AT1G11500	44.324	185	91	5	1	175	1	183	4.40e-46	149
MsG0280006567.01.T01	AT1G11500	44.324	185	91	5	1	175	6	188	4.48e-46	150
MsG0280006567.01.T01	AT1G11500	48.507	134	64	3	45	175	24	155	2.41e-37	126
MsG0280006567.01.T01	AT1G05291	35.714	154	87	5	12	160	23	169	2.53e-17	76.3

Find 18 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCATGACAAGTATGCAAATA+AGG	0.285775	2:+3522401	None:intergenic
TAAGAGCTGCAAGTCCTAAT+TGG	0.301626	2:+3522056	None:intergenic
AGCCATCAAGCTTTCCAATT+AGG	0.307387	2:-3522070	MsG0280006567.01.T01:CDS
TCAAATATCCACATCTTCAT+AGG	0.374996	2:+3522106	None:intergenic
GATATTGTTGCAGGCATACT+TGG	0.378516	2:-3522373	MsG0280006567.01.T01:CDS
CATATAATTGCTAACTTGCT+TGG	0.379275	2:-3522016	MsG0280006567.01.T01:CDS
TTGGAGGCTGCGTTTGTGTT+TGG	0.397312	2:-3521997	MsG0280006567.01.T01:CDS
GTCCTAATTGGAAAGCTTGA+TGG	0.422083	2:+3522068	None:intergenic
AGCCACAGATAATTGTCTAT+TGG	0.431607	2:+3521946	None:intergenic
CCTTATTTGCATACTTGTCA+TGG	0.434363	2:-3522401	MsG0280006567.01.T01:CDS
AGATGTGGATATTTGATTGT+AGG	0.471306	2:-3522099	MsG0280006567.01.T01:CDS
AATTGGAAAGCTTGATGGCT+AGG	0.481649	2:+3522073	None:intergenic
ATGGTGATGGATATTGTTGC+AGG	0.483198	2:-3522382	MsG0280006567.01.T01:CDS
TTGCATACTTGTCATGGTGA+TGG	0.517259	2:-3522395	MsG0280006567.01.T01:CDS
ATAATTGCTAACTTGCTTGG+AGG	0.540663	2:-3522013	MsG0280006567.01.T01:CDS
AGGAGAAGCCTATGAAGATG+TGG	0.600242	2:-3522114	MsG0280006567.01.T01:CDS
AGCAGAGATAGCTCAAAACA+AGG	0.658255	2:-3522344	MsG0280006567.01.T01:intron
AGCCAATAGACAATTATCTG+TGG	0.670969	2:-3521948	MsG0280006567.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGATATTTATATAAACTTC+AGG	+	Chr2:3521906-3521925	None:intergenic	15.0%
!!	AAAAATAAAGCTGATTGAAA+AGG	+	Chr2:3521499-3521518	None:intergenic	20.0%
!!	GCAAAAAATTAAGAATAAGA+GGG	+	Chr2:3522079-3522098	None:intergenic	20.0%
!!	TATGAATAACGTTTAAGAAT+AGG	+	Chr2:3522127-3522146	None:intergenic	20.0%
!!	TGCAAAAAATTAAGAATAAG+AGG	+	Chr2:3522080-3522099	None:intergenic	20.0%
!!!	CTTATTCTTAATTTTTTGCA+TGG	-	Chr2:3522080-3522099	MsG0280006567.01.T01:CDS	20.0%
!	AATCATAGGTTTCTATTCAT+AGG	-	Chr2:3522300-3522319	MsG0280006567.01.T01:intron	25.0%
!	ATCTATGTGTGTAATTTACA+GGG	-	Chr2:3522194-3522213	MsG0280006567.01.T01:intron	25.0%
!	GACATTGTTTAATAAACGTT+TGG	-	Chr2:3521955-3521974	MsG0280006567.01.T01:CDS	25.0%
!	GTGGGATATTATTTAATCAT+AGG	-	Chr2:3522286-3522305	MsG0280006567.01.T01:intron	25.0%
!	TAATGTTCCTATAATTAGCA+TGG	+	Chr2:3522241-3522260	None:intergenic	25.0%
!	TATCTATGTGTGTAATTTAC+AGG	-	Chr2:3522193-3522212	MsG0280006567.01.T01:intron	25.0%
	AGATGTGGATATTTGATTGT+AGG	-	Chr2:3521557-3521576	MsG0280006567.01.T01:intron	30.0%
	CAAGATCAAGAAAATCATGT+GGG	-	Chr2:3522268-3522287	MsG0280006567.01.T01:intron	30.0%
	CTATTTAGACTTAGACACTT+TGG	-	Chr2:3521345-3521364	MsG0280006567.01.T01:CDS	30.0%
	GCACTCATATATAAACGTTA+TGG	+	Chr2:3521764-3521783	None:intergenic	30.0%
	TCAAATATCCACATCTTCAT+AGG	+	Chr2:3521553-3521572	None:intergenic	30.0%
	TCAAGATCAAGAAAATCATG+TGG	-	Chr2:3522267-3522286	MsG0280006567.01.T01:intron	30.0%
	TCATCGTTATTACAATCTAG+TGG	+	Chr2:3521937-3521956	None:intergenic	30.0%
!	AATAAGGAAGCCATAGTTTT+TGG	+	Chr2:3521242-3521261	None:intergenic	30.0%
!	ACGTAACTTTTGCAAAATCA+CGG	+	Chr2:3521424-3521443	None:intergenic	30.0%
!	CTCTTTTGCAATATGAAAAC+AGG	-	Chr2:3521522-3521541	MsG0280006567.01.T01:intron	30.0%
!!	CATATAATTGCTAACTTGCT+TGG	-	Chr2:3521640-3521659	MsG0280006567.01.T01:intron	30.0%
!!	CGTTCTTTTTATTTGCCTAT+TGG	-	Chr2:3521812-3521831	MsG0280006567.01.T01:intron	30.0%
	AGCCAATAGACAATTATCTG+TGG	-	Chr2:3521708-3521727	MsG0280006567.01.T01:intron	35.0%
	AGCCACAGATAATTGTCTAT+TGG	+	Chr2:3521713-3521732	None:intergenic	35.0%
	CAAGTGCATGTTTGATGTTA+CGG	+	Chr2:3521463-3521482	None:intergenic	35.0%
	CATAGGTTTCTATTCATAGG+TGG	-	Chr2:3522303-3522322	MsG0280006567.01.T01:intron	35.0%
	CCATGACAAGTATGCAAATA+AGG	+	Chr2:3521258-3521277	None:intergenic	35.0%
	GCATTCTCCATGCTAATTAT+AGG	-	Chr2:3522231-3522250	MsG0280006567.01.T01:intron	35.0%
	TGAAATAAATGCACACGTCA+TGG	-	Chr2:3521853-3521872	MsG0280006567.01.T01:intron	35.0%
!	CCTTATTTGCATACTTGTCA+TGG	-	Chr2:3521255-3521274	MsG0280006567.01.T01:CDS	35.0%
!	CTCATTTTCTCTTGGTAAGT+TGG	-	Chr2:3521736-3521755	MsG0280006567.01.T01:intron	35.0%
!	TGGCTTTTCTCATTTTCTCT+TGG	-	Chr2:3521728-3521747	MsG0280006567.01.T01:intron	35.0%
!!	ATAATTGCTAACTTGCTTGG+AGG	-	Chr2:3521643-3521662	MsG0280006567.01.T01:intron	35.0%
	AAGGAACAGTGAACAATCCA+TGG	+	Chr2:3522344-3522363	None:intergenic	40.0%
	AGCAGAGATAGCTCAAAACA+AGG	-	Chr2:3521312-3521331	MsG0280006567.01.T01:CDS	40.0%
	AGCCATCAAGCTTTCCAATT+AGG	-	Chr2:3521586-3521605	MsG0280006567.01.T01:intron	40.0%
	GATATTGTTGCAGGCATACT+TGG	-	Chr2:3521283-3521302	MsG0280006567.01.T01:CDS	40.0%
	GCTGTGGCAGAAACATAATA+AGG	+	Chr2:3522363-3522382	None:intergenic	40.0%
	GTCCTAATTGGAAAGCTTGA+TGG	+	Chr2:3521591-3521610	None:intergenic	40.0%
	TAAGAGCTGCAAGTCCTAAT+TGG	+	Chr2:3521603-3521622	None:intergenic	40.0%
	TGTAATTTACAGGGTCGTGA+TGG	-	Chr2:3522203-3522222	MsG0280006567.01.T01:intron	40.0%
	TTGCATACTTGTCATGGTGA+TGG	-	Chr2:3521261-3521280	MsG0280006567.01.T01:CDS	40.0%
	TTTCAAGATGTGTGACCACT+AGG	+	Chr2:3521838-3521857	None:intergenic	40.0%
!	AATTGGAAAGCTTGATGGCT+AGG	+	Chr2:3521586-3521605	None:intergenic	40.0%
!	GGCATTTTGTGTTTCATCCA+TGG	-	Chr2:3522324-3522343	MsG0280006567.01.T01:intron	40.0%
!	TTATTTGCCTATTGGCCTAG+TGG	-	Chr2:3521820-3521839	MsG0280006567.01.T01:intron	40.0%
!	TTGCCTCTTTTCTTCTCTTC+TGG	+	Chr2:3522388-3522407	None:intergenic	40.0%
!!	ATGGTGATGGATATTGTTGC+AGG	-	Chr2:3521274-3521293	MsG0280006567.01.T01:CDS	40.0%
	AAGAGGCAACTAGAAAGCCT+AGG	-	Chr2:3522399-3522418	MsG0280006567.01.T01:CDS	45.0%
	AGGAGAAGCCTATGAAGATG+TGG	-	Chr2:3521542-3521561	MsG0280006567.01.T01:intron	45.0%
	CCACCAGAAGAGAAGAAAAG+AGG	-	Chr2:3522382-3522401	MsG0280006567.01.T01:CDS	45.0%
	GCACACGTCATGGAAAAATG+TGG	-	Chr2:3521863-3521882	MsG0280006567.01.T01:intron	45.0%
!	CCTCTTTTCTTCTCTTCTGG+TGG	+	Chr2:3522385-3522404	None:intergenic	45.0%
!!	GTGCATTAGACAAAAGCGTC+TGG	+	Chr2:3521995-3522014	None:intergenic	45.0%
	TGTGTGACCACTAGGCCAAT+AGG	+	Chr2:3521830-3521849	None:intergenic	50.0%
	TTCTTCTCTTCTGGTGGCTG+TGG	+	Chr2:3522379-3522398	None:intergenic	50.0%
	TTGGAGGCTGCGTTTGTGTT+TGG	-	Chr2:3521659-3521678	MsG0280006567.01.T01:intron	50.0%
	TTCGTCTTACGGCGGGACCT+AGG	+	Chr2:3522419-3522438	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	3521235	3522443	3521235	ID=MsG0280006567.01;Name=MsG0280006567.01
Chr2	mRNA	3521235	3522443	3521235	ID=MsG0280006567.01.T01;Parent=MsG0280006567.01;Name=MsG0280006567.01.T01;_AED=0.32;_eAED=0.32;_QI=0\|0\|0\|1\|0\|0\|3\|0\|177
Chr2	exon	3521929	3522134	3521929	ID=MsG0280006567.01.T01:exon:802;Parent=MsG0280006567.01.T01
Chr2	exon	3522345	3522443	3522345	ID=MsG0280006567.01.T01:exon:801;Parent=MsG0280006567.01.T01
Chr2	CDS	3522345	3522443	3522345	ID=MsG0280006567.01.T01:cds;Parent=MsG0280006567.01.T01
Chr2	CDS	3521929	3522134	3521929	ID=MsG0280006567.01.T01:cds;Parent=MsG0280006567.01.T01
Chr2	CDS	3521235	3521463	3521235	ID=MsG0280006567.01.T01:cds;Parent=MsG0280006567.01.T01
Chr2	mRNA	3521235	3522125	3521235	ID=MsG0280006567.01.T02;Parent=MsG0280006567.01;Name=MsG0280006567.01.T02;_AED=0.35;_eAED=0.36;_QI=0\|0\|0\|1\|0\|0\|2\|0\|141
Chr2	exon	3521929	3522125	3521929	ID=MsG0280006567.01.T02:exon:804;Parent=MsG0280006567.01.T02
Chr2	CDS	3521929	3522125	3521929	ID=MsG0280006567.01.T02:cds;Parent=MsG0280006567.01.T02
Chr2	CDS	3521235	3521463	3521235	ID=MsG0280006567.01.T02:cds;Parent=MsG0280006567.01.T02

Gene Sequence

>MsG0280006567.01.T02

ATGAAGATGTGGATATTTGATTGTAGGAATCCTAGCCATCAAGCTTTCCAATTAGGACTTGCAGCTCTTATTCTCTTGTCTCTTGCTCATATAATTGCTAACTTGCTTGGAGGCTGCGTTTGTGTTTGGTCTAAAGATCAATATAGATCAGCTACAGCCAATAGACAATTATCTGTGGCTTTTCTCATTTTCTCTTGGGTCGTGATGGCAGTTGCATTCTCCATGCTAATTATAGGAACATTAGCAAACTCAAGATCAAGAAAATCATGTGGGATATTATTTAATCATAGGTTTCTATTCATAGGTGGCATTTTGTGTTTCATCCATGGATTGTTCACTGTTCCTTATTATGTTTCTGCCACAGCCACCAGAAGAGAAGAAAAGAGGCAACTAGAAAGCCTAGGTCCCGCCGTAAGACGAACTTAA

>MsG0280006567.01.T01

ATGGCCAAAAACTATGGCTTCCTTATTTGCATACTTGTCATGGTGATGGATATTGTTGCAGGCATACTTGGAATTCAAGCAGAGATAGCTCAAAACAAGGAGAAGCCTATGAAGATGTGGATATTTGATTGTAGGAATCCTAGCCATCAAGCTTTCCAATTAGGACTTGCAGCTCTTATTCTCTTGTCTCTTGCTCATATAATTGCTAACTTGCTTGGAGGCTGCGTTTGTGTTTGGTCTAAAGATCAATATAGATCAGCTACAGCCAATAGACAATTATCTGTGGCTTTTCTCATTTTCTCTTGGGTCGTGATGGCAGTTGCATTCTCCATGCTAATTATAGGAACATTAGCAAACTCAAGATCAAGAAAATCATGTGGGATATTATTTAATCATAGGTTTCTATTCATAGGTGGCATTTTGTGTTTCATCCATGGATTGTTCACTGTTCCTTATTATGTTTCTGCCACAGCCACCAGAAGAGAAGAAAAGAGGCAACTAGAAAGCCTAGGTCCCGCCGTAAGACGAACTTAA

Protein sequence

>MsG0280006567.01.T02

MKMWIFDCRNPSHQAFQLGLAALILLSLAHIIANLLGGCVCVWSKDQYRSATANRQLSVAFLIFSWVVMAVAFSMLIIGTLANSRSRKSCGILFNHRFLFIGGILCFIHGLFTVPYYVSATATRREEKRQLESLGPAVRRT*

>MsG0280006567.01.T01

MAKNYGFLICILVMVMDIVAGILGIQAEIAQNKEKPMKMWIFDCRNPSHQAFQLGLAALILLSLAHIIANLLGGCVCVWSKDQYRSATANRQLSVAFLIFSWVVMAVAFSMLIIGTLANSRSRKSCGILFNHRFLFIGGILCFIHGLFTVPYYVSATATRREEKRQLESLGPAVRRT*