AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015786.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015786.01.T01 MTR_3g077430 86.724 467 19 3 1 426 1 465 0.0 795
MsG0380015786.01.T01 MTR_4g105400 73.775 347 54 2 117 426 12 358 0.0 540
MsG0380015786.01.T01 MTR_5g033650 63.836 365 87 6 105 426 4 366 2.46e-164 466
MsG0380015786.01.T01 MTR_8g069575 58.915 387 115 5 83 426 26 411 9.39e-163 464
MsG0380015786.01.T01 MTR_8g069600 52.381 378 130 5 97 426 18 393 1.11e-133 390
MsG0380015786.01.T01 MTR_8g069610 48.086 418 165 8 52 426 6 414 7.44e-131 383
MsG0380015786.01.T01 MTR_3g095890 44.766 449 172 11 23 425 15 433 6.85e-123 363
MsG0380015786.01.T01 MTR_7g116420 49.105 391 134 9 100 425 49 439 8.65e-121 358
MsG0380015786.01.T01 MTR_1g079730 47.631 401 136 10 100 426 51 451 3.84e-117 350
MsG0380015786.01.T01 MTR_8g088510 46.859 382 143 9 103 425 35 415 8.24e-117 347
MsG0380015786.01.T01 MTR_2g062610 47.165 388 143 9 100 426 40 426 6.28e-115 343
MsG0380015786.01.T01 MTR_8g069720 43.405 417 173 10 56 426 8 407 1.28e-112 337
MsG0380015786.01.T01 MTR_8g069580 48.219 365 125 5 105 426 51 394 1.26e-111 333
MsG0380015786.01.T01 MTR_8g069715 46.070 369 144 9 105 426 50 410 6.01e-103 312
MsG0380015786.01.T01 MTR_8g069640 42.439 410 184 10 56 425 7 404 8.12e-103 311
MsG0380015786.01.T01 MTR_2g062610 49.351 308 108 6 166 426 30 336 1.72e-100 303
MsG0380015786.01.T01 MTR_8g069660 43.210 405 183 12 58 426 7 400 2.40e-100 305
MsG0380015786.01.T01 MTR_2g062610 49.351 308 108 6 166 426 37 343 2.88e-100 303
MsG0380015786.01.T01 MTR_8g069590 49.664 298 112 3 166 426 9 305 6.76e-100 300
MsG0380015786.01.T01 MTR_2g093840 45.317 331 123 12 142 426 42 360 6.62e-80 251
MsG0380015786.01.T01 MTR_2g073040 46.565 262 92 7 83 302 14 269 1.54e-68 219
MsG0380015786.01.T01 MTR_2g073020 42.642 265 107 4 79 302 22 282 8.51e-63 204
MsG0380015786.01.T01 MTR_6g012620 34.250 400 193 11 93 426 15 410 3.09e-61 204
MsG0380015786.01.T01 MTR_3g104000 34.974 386 179 11 104 421 30 411 1.28e-57 195
MsG0380015786.01.T01 MTR_3g104030 33.929 392 188 11 94 422 27 410 2.41e-56 191
MsG0380015786.01.T01 MTR_3g104070 33.085 402 181 15 94 421 29 416 1.63e-54 187
MsG0380015786.01.T01 MTR_3g103980 32.564 390 191 11 104 426 51 435 6.64e-54 186
MsG0380015786.01.T01 MTR_8g069695 36.437 247 121 4 216 426 13 259 4.18e-51 173
MsG0380015786.01.T01 MTR_8g069630 55.814 129 56 1 299 426 1 129 2.51e-47 159
MsG0380015786.01.T01 MTR_1g016910 31.856 361 179 11 130 426 63 420 3.91e-47 167
MsG0380015786.01.T01 MTR_3g104030 32.710 321 152 8 162 422 30 346 9.90e-44 156
MsG0380015786.01.T01 MTR_8g069665 57.955 88 35 1 115 202 107 192 1.19e-30 117
MsG0380015786.01.T01 MTR_8g040850 27.342 395 209 14 88 422 14 390 4.61e-29 117
MsG0380015786.01.T01 MTR_5g078580 29.503 322 172 8 97 375 28 337 1.18e-28 116
MsG0380015786.01.T01 MTR_8g040890 26.786 392 209 12 103 420 31 418 2.46e-26 110
MsG0380015786.01.T01 MTR_3g108680 25.269 372 202 11 40 375 3 334 1.88e-25 107
MsG0380015786.01.T01 MTR_2g073050 57.746 71 29 1 356 426 1 70 5.06e-24 95.1
MsG0380015786.01.T01 MTR_2g046390 29.487 312 180 14 120 420 43 325 2.48e-23 100
MsG0380015786.01.T01 MTR_2g046390 27.221 349 181 14 121 420 44 368 1.09e-21 96.3
MsG0380015786.01.T01 MTR_8g104480 26.087 345 193 14 123 420 8 337 4.56e-20 91.3
MsG0380015786.01.T01 MTR_8g069750 47.727 88 43 3 269 353 185 272 6.15e-20 89.7
MsG0380015786.01.T01 MTR_5g094280 28.409 264 146 7 100 329 24 278 1.25e-19 89.7
MsG0380015786.01.T01 MTR_8g012985 33.333 168 99 7 263 420 73 237 6.59e-18 83.2
MsG0380015786.01.T01 MTR_7g072230 32.298 161 94 7 269 418 49 205 2.63e-16 77.8
MsG0380015786.01.T01 MTR_2g046430 30.516 213 130 11 223 422 33 240 2.12e-14 72.8
MsG0380015786.01.T01 MTR_2g046520 29.098 244 119 12 227 422 3 240 7.40e-14 71.2
MsG0380015786.01.T01 MTR_8g069950 65.909 44 15 0 264 307 68 111 2.42e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015786.01.T01 AT5G50150 63.281 384 95 6 87 426 39 420 4.75e-175 496
MsG0380015786.01.T01 AT1G23340 56.796 412 124 6 57 426 10 409 1.02e-165 472
MsG0380015786.01.T01 AT1G23340 56.796 412 124 6 57 426 10 409 1.02e-165 472
MsG0380015786.01.T01 AT1G70550 60.686 379 106 4 90 426 88 465 4.61e-165 472
MsG0380015786.01.T01 AT1G10750 59.631 379 110 4 90 426 90 467 1.37e-163 469
MsG0380015786.01.T01 AT1G55360 48.101 395 144 10 92 426 29 422 2.46e-122 362
MsG0380015786.01.T01 AT3G13510 44.393 428 156 10 57 426 16 419 1.14e-120 357
MsG0380015786.01.T01 AT5G56530 46.457 381 145 8 103 425 40 419 1.82e-115 344
MsG0380015786.01.T01 AT5G56530 46.457 381 145 8 103 425 40 419 1.82e-115 344
MsG0380015786.01.T01 AT5G18460 47.532 385 143 8 100 425 45 429 1.08e-114 343
MsG0380015786.01.T01 AT2G44210 44.529 393 156 9 95 426 24 415 8.66e-111 332
MsG0380015786.01.T01 AT2G44210 41.928 415 149 9 103 426 32 445 5.04e-106 321
MsG0380015786.01.T01 AT2G44220 41.755 376 162 10 103 426 33 403 2.65e-94 290
MsG0380015786.01.T01 AT1G23340 51.220 287 87 5 57 302 10 284 3.95e-90 275
MsG0380015786.01.T01 AT2G17750 39.740 385 171 12 95 425 18 395 1.43e-86 270
MsG0380015786.01.T01 AT2G44240 41.176 374 166 10 103 426 33 402 1.70e-86 270
MsG0380015786.01.T01 AT2G19360 38.931 393 166 10 105 425 35 425 9.15e-80 253
MsG0380015786.01.T01 AT3G48230 39.607 356 163 8 117 426 24 373 9.16e-80 251
MsG0380015786.01.T01 AT1G70550 64.516 186 60 2 90 270 88 272 2.96e-78 244
MsG0380015786.01.T01 AT2G44250 41.114 377 162 10 104 425 37 408 2.15e-77 246
MsG0380015786.01.T01 AT1G10750 59.314 204 72 3 90 283 90 292 2.72e-77 244
MsG0380015786.01.T01 AT5G19170 37.363 364 172 8 102 420 13 365 1.05e-72 233
MsG0380015786.01.T01 AT2G44250 40.446 314 139 7 158 425 14 325 1.24e-61 202
MsG0380015786.01.T01 AT5G25950 33.744 406 193 10 90 426 34 432 2.37e-57 194
MsG0380015786.01.T01 AT2G20170 32.316 393 213 13 60 420 8 379 2.58e-49 172
MsG0380015786.01.T01 AT2G20170 30.637 408 217 13 60 420 8 396 2.64e-47 167
MsG0380015786.01.T01 AT2G20170 30.637 408 217 13 60 420 8 396 2.64e-47 167
MsG0380015786.01.T01 AT5G25960 30.469 384 179 9 90 426 15 357 1.82e-43 156
MsG0380015786.01.T01 AT4G23360 30.376 372 194 13 104 420 38 399 1.32e-40 149
MsG0380015786.01.T01 AT4G23390 30.318 409 218 16 61 420 7 397 5.34e-40 147
MsG0380015786.01.T01 AT4G23365 29.268 369 199 12 105 420 39 398 5.22e-39 145
MsG0380015786.01.T01 AT4G23370 30.376 372 197 14 105 420 36 401 1.33e-38 144
MsG0380015786.01.T01 AT4G23355 30.163 368 199 15 104 420 38 398 7.41e-38 142
MsG0380015786.01.T01 AT4G23350 29.459 370 201 16 104 420 38 400 1.89e-36 138
MsG0380015786.01.T01 AT4G23380 28.150 373 199 14 104 420 39 398 4.85e-33 129
MsG0380015786.01.T01 AT4G15050 27.513 378 195 16 103 420 36 394 9.02e-28 114
MsG0380015786.01.T01 AT1G10190 28.533 375 195 16 103 420 36 394 2.03e-27 113
MsG0380015786.01.T01 AT4G10220 26.442 416 231 17 54 420 9 398 9.29e-27 111
MsG0380015786.01.T01 AT2G35250 27.635 351 188 10 112 422 15 339 3.77e-25 105
MsG0380015786.01.T01 AT4G15053 26.933 375 204 14 103 420 40 401 4.50e-25 106
MsG0380015786.01.T01 AT4G23373 28.000 325 159 15 109 420 40 302 7.32e-24 101
MsG0380015786.01.T01 AT2G24950 26.016 369 209 14 103 420 54 409 2.90e-23 101
MsG0380015786.01.T01 AT5G46820 24.581 358 203 13 112 420 8 347 2.15e-20 92.4
MsG0380015786.01.T01 AT5G46810 24.022 358 211 12 113 420 3 349 1.80e-18 86.7
MsG0380015786.01.T01 AT4G10210 25.124 402 231 17 54 407 9 388 6.18e-18 85.5
MsG0380015786.01.T01 AT4G17505 24.927 341 179 13 119 426 25 321 6.45e-18 84.7
MsG0380015786.01.T01 AT5G60380 24.138 348 198 14 124 425 44 371 4.82e-16 79.7
MsG0380015786.01.T01 AT4G23080 24.178 426 240 20 53 422 8 406 5.48e-15 76.6
MsG0380015786.01.T01 AT5G25410 25.519 337 194 13 124 420 44 363 1.56e-14 75.1
MsG0380015786.01.T01 AT5G37520 30.864 162 94 7 268 421 47 198 5.99e-14 70.9

Find 102 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTATCCCTTTGGCCTTTC+TGG 0.032761 3:+75012948 None:intergenic
TTTGATCATCCTAAGCTTAA+AGG 0.172683 3:-75013093 MsG0380015786.01.T01:CDS
GATTGTGAATGCTCGTTCTA+AGG 0.242059 3:-75010606 MsG0380015786.01.T01:CDS
TAAATCCTTCTTCTGCAAAA+TGG 0.251332 3:+75010552 None:intergenic
TTGCTATCTTGTTGTTAGTT+TGG 0.257816 3:+75011585 None:intergenic
GAATCTCTCCGTACAGGTTT+TGG 0.268183 3:+75012783 None:intergenic
TTTCAGCTGTGGACTGATTC+TGG 0.270068 3:-75012897 MsG0380015786.01.T01:CDS
AGCAGGGTAATAACAATGTT+TGG 0.280005 3:-75010421 MsG0380015786.01.T01:CDS
AACCGTGGACAGTTTGATAT+TGG 0.280369 3:-75011530 MsG0380015786.01.T01:CDS
AGCCAGCAATAACCCATATC+TGG 0.287768 3:+75012115 None:intergenic
AATTTAGCTTGTCCCAGATA+TGG 0.289493 3:-75012128 MsG0380015786.01.T01:CDS
TGGGTTATTGCTGGCTCCTT+TGG 0.293081 3:-75012108 MsG0380015786.01.T01:CDS
GCAAGTTCTATCAAAAGATT+TGG 0.293382 3:-75012813 MsG0380015786.01.T01:CDS
CTATAATAAAATAATTAAAT+TGG 0.294632 3:+75010335 None:intergenic
TCTTCTGTTGTTCTTCTGAT+TGG 0.306036 3:+75012849 None:intergenic
GCAGGGTAATAACAATGTTT+GGG 0.312146 3:-75010420 MsG0380015786.01.T01:CDS
ACTAACAACAAGATAGCAAT+AGG 0.320394 3:-75011581 MsG0380015786.01.T01:CDS
CTGCTTAATGTTATAACAAT+TGG 0.320834 3:+75010439 None:intergenic
ATTGGTGCCATTTATCTTCA+TGG 0.325038 3:+75010353 None:intergenic
GAAACTTACAAGTCATTGAT+TGG 0.334217 3:-75010511 MsG0380015786.01.T01:CDS
TTGATATTGGCATAATGATT+TGG 0.339854 3:-75011517 MsG0380015786.01.T01:CDS
GGGCATTTCACATTTCTTCC+AGG 0.340470 3:+75010374 None:intergenic
CAAACATGTTTAGTCACTTA+AGG 0.351583 3:-75010661 MsG0380015786.01.T01:CDS
TTGATCATCCTAAGCTTAAA+GGG 0.352738 3:-75013092 MsG0380015786.01.T01:CDS
TCCCAGATATGGGTTATTGC+TGG 0.354056 3:-75012117 MsG0380015786.01.T01:CDS
CTGATTGGAACAGTTCCTTC+TGG 0.362002 3:+75012864 None:intergenic
ATAAGTCTGGTTAGTCTTCA+AGG 0.365189 3:+75013502 None:intergenic
GAAATGCCCATGAAGATAAA+TGG 0.369174 3:-75010360 MsG0380015786.01.T01:exon
GTAAATGGAAATCAATACTT+TGG 0.375350 3:-75012201 MsG0380015786.01.T01:CDS
GAGGATTATTAGTTGGATAC+TGG 0.382244 3:-75010688 MsG0380015786.01.T01:CDS
CTGAACCTGCTTTATAAGTC+TGG 0.386950 3:+75013489 None:intergenic
CATGCAAGCATGGTACAATT+TGG 0.389315 3:-75010635 MsG0380015786.01.T01:CDS
CCATTGTTGTAGTATCCCTT+TGG 0.394843 3:+75012939 None:intergenic
AACCACCAGTGTCCATGCTT+TGG 0.397011 3:+75010719 None:intergenic
GTGTGGTGTGCTACACAATA+TGG 0.403466 3:+75013710 None:intergenic
GGTTTATGCCCTTTAAGCTT+AGG 0.407567 3:+75013084 None:intergenic
CCACACATTTATGTTTGCCT+TGG 0.423813 3:+75012176 None:intergenic
AAGTGACTAAACATGTTTGC+TGG 0.424031 3:+75010665 None:intergenic
ATTTAGCTTGTCCCAGATAT+GGG 0.425371 3:-75012127 MsG0380015786.01.T01:CDS
TCTTGCTAATATTCATCACT+TGG 0.440337 3:-75010471 MsG0380015786.01.T01:CDS
GAGTACGGAGGATTATTAGT+TGG 0.443449 3:-75010695 MsG0380015786.01.T01:CDS
CAATCTATCAAATCACCATC+TGG 0.451064 3:+75013141 None:intergenic
GGCATTTCACATTTCTTCCA+GGG 0.458404 3:+75010375 None:intergenic
CACGGTTATAAGCTGATGTA+GGG 0.467774 3:+75011546 None:intergenic
CTAACAACAAGATAGCAATA+GGG 0.470151 3:-75011580 MsG0380015786.01.T01:CDS
AAACTTACAAGTCATTGATT+GGG 0.470160 3:-75010510 MsG0380015786.01.T01:CDS
CAATTGTTATAACATTAAGC+AGG 0.472121 3:-75010438 MsG0380015786.01.T01:CDS
TTACCACACCGACACTCAAA+TGG 0.474382 3:-75010582 MsG0380015786.01.T01:CDS
TATCCCTTTGGCCTTTCTGG+TGG 0.482974 3:+75012951 None:intergenic
ATACTACAACAATGGAGAAA+AGG 0.486967 3:-75012931 MsG0380015786.01.T01:CDS
TTGGTGCCATTTATCTTCAT+GGG 0.489912 3:+75010354 None:intergenic
CCAAAGGGATACTACAACAA+TGG 0.490175 3:-75012939 MsG0380015786.01.T01:CDS
AGCTTAGGATGATCAAAAGC+TGG 0.492216 3:+75013099 None:intergenic
TAAGTCTGGTTAGTCTTCAA+GGG 0.494109 3:+75013503 None:intergenic
CCACGGTTATAAGCTGATGT+AGG 0.497933 3:+75011545 None:intergenic
CTAATTGAATCTCTCCGTAC+AGG 0.512104 3:+75012777 None:intergenic
AAGTGGACAATATGAGAGAA+TGG 0.513503 3:+75013642 None:intergenic
ATTGTGAATGCTCGTTCTAA+GGG 0.526045 3:-75010605 MsG0380015786.01.T01:CDS
GCCACTTCCCATTTGAGTGT+CGG 0.531546 3:+75010574 None:intergenic
GATCTGAATACTCTAGAAGC+TGG 0.535306 3:-75012081 MsG0380015786.01.T01:intron
GCTTAAAGGGCATAAACCAC+TGG 0.535463 3:-75013079 MsG0380015786.01.T01:intron
TAGAATTAGAATGGAAGCAA+AGG 0.536775 3:-75013768 None:intergenic
CAGTTTCCTTGAAAAGACAT+AGG 0.537425 3:-75013739 MsG0380015786.01.T01:CDS
GTGGCTAGAATCTGAGACAA+TGG 0.543283 3:+75013526 None:intergenic
CTTAAGGAGTCATGCAAGCA+TGG 0.548826 3:-75010645 MsG0380015786.01.T01:CDS
GCCAGCAATAACCCATATCT+GGG 0.550061 3:+75012116 None:intergenic
GCAAGCATGGTACAATTTGG+TGG 0.552322 3:-75010632 MsG0380015786.01.T01:CDS
TACCACACCGACACTCAAAT+GGG 0.555983 3:-75010581 MsG0380015786.01.T01:CDS
GTTCTATCAAAAGATTTGGA+AGG 0.566425 3:-75012809 MsG0380015786.01.T01:CDS
TTCAATTAGCAGTGATCATG+AGG 0.571226 3:-75012763 MsG0380015786.01.T01:intron
AATTGTTATAACATTAAGCA+GGG 0.572505 3:-75010437 MsG0380015786.01.T01:CDS
TATTGGCATAATGATTTGGA+AGG 0.580599 3:-75011513 MsG0380015786.01.T01:intron
AAATCAATACTTTGGAGCCA+AGG 0.583744 3:-75012193 MsG0380015786.01.T01:CDS
GATCCACCAGAAAGGCCAAA+GGG 0.583977 3:-75012954 MsG0380015786.01.T01:CDS
ACCGACACTCAAATGGGAAG+TGG 0.587290 3:-75010575 MsG0380015786.01.T01:CDS
GGACACTGGTGGTTAGAGTA+CGG 0.591126 3:-75010710 MsG0380015786.01.T01:CDS
AAGTGATGAATATTAGCAAG+AGG 0.592167 3:+75010473 None:intergenic
GAAGGAAACCAAAACCTGTA+CGG 0.593940 3:-75012791 MsG0380015786.01.T01:CDS
TAACAACAAGATAGCAATAG+GGG 0.596202 3:-75011579 MsG0380015786.01.T01:CDS
TGCCAATATCAAACTGTCCA+CGG 0.597797 3:+75011528 None:intergenic
ACTTTGTATCAGAGTCCAGA+TGG 0.600213 3:-75013156 MsG0380015786.01.T01:intron
CCAAGGCAAACATAAATGTG+TGG 0.602971 3:-75012176 MsG0380015786.01.T01:CDS
GTTTACAGGATCCACCAGAA+AGG 0.603971 3:-75012962 MsG0380015786.01.T01:intron
ACTAACCAGACTTATAAAGC+AGG 0.607754 3:-75013494 MsG0380015786.01.T01:CDS
TGTGAACAGGATCCAAAGCA+TGG 0.614621 3:-75010731 MsG0380015786.01.T01:intron
CAAGGCAAACATAAATGTGT+GGG 0.616077 3:-75012175 MsG0380015786.01.T01:CDS
TTCCCATTTGAGTGTCGGTG+TGG 0.620291 3:+75010579 None:intergenic
TTAATGAGAAGTTTCAGCTG+TGG 0.623212 3:-75012908 MsG0380015786.01.T01:CDS
AAGTCTGGTTAGTCTTCAAG+GGG 0.632401 3:+75013504 None:intergenic
TCATATCCATCTGTTACATG+AGG 0.644566 3:+75012150 None:intergenic
CAGGGTAATAACAATGTTTG+GGG 0.644781 3:-75010419 MsG0380015786.01.T01:CDS
TCTGGTTAGTCTTCAAGGGG+TGG 0.644987 3:+75013507 None:intergenic
TGATGAGAGTGAGACAATGC+TGG 0.646817 3:+75013551 None:intergenic
AGTATTCAGATCATTACCAA+AGG 0.647857 3:+75012092 None:intergenic
AGGATCCAAAGCATGGACAC+TGG 0.649017 3:-75010724 MsG0380015786.01.T01:CDS
TCTGGTGAAGAATGTCCAGA+AGG 0.650833 3:-75012879 MsG0380015786.01.T01:CDS
GGATCCACCAGAAAGGCCAA+AGG 0.651755 3:-75012955 MsG0380015786.01.T01:CDS
TGGGCACCTCATGTAACAGA+TGG 0.656951 3:-75012156 MsG0380015786.01.T01:CDS
ATCCAAAGCATGGACACTGG+TGG 0.664040 3:-75010721 MsG0380015786.01.T01:CDS
ACGGTTATAAGCTGATGTAG+GGG 0.689573 3:+75011547 None:intergenic
CCTACATCAGCTTATAACCG+TGG 0.701785 3:-75011545 MsG0380015786.01.T01:CDS
CACTGGTGGTTAGAGTACGG+AGG 0.713683 3:-75010707 MsG0380015786.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTGATATTGAATTTTA+AGG + Chr3:75011354-75011373 None:intergenic 15.0%
!! AAAAGTAGTAAGATTAATCA+TGG + Chr3:75013185-75013204 None:intergenic 20.0%
!! AACAATAAACAAACAAAAAC+AGG + Chr3:75010492-75010511 None:intergenic 20.0%
!! AATTAGAAAAAGAAACATCA+TGG + Chr3:75013024-75013043 None:intergenic 20.0%
!! AATTGTTATAACATTAAGCA+GGG - Chr3:75013648-75013667 MsG0380015786.01.T01:CDS 20.0%
!! ATTGGAAATATGTGTTAAAA+AGG + Chr3:75013119-75013138 None:intergenic 20.0%
!! CCATACAAAATTTATAAATC+AGG - Chr3:75011052-75011071 MsG0380015786.01.T01:intron 20.0%
!! GTTAATTATGTTGTAAACTA+TGG - Chr3:75011487-75011506 MsG0380015786.01.T01:intron 20.0%
!! TTAAATATTAGTACAATGCA+AGG - Chr3:75013315-75013334 MsG0380015786.01.T01:intron 20.0%
!!! AATTTTGCTATGAAATTGAA+AGG + Chr3:75012717-75012736 None:intergenic 20.0%
!!! CCTGATTTATAAATTTTGTA+TGG + Chr3:75011055-75011074 None:intergenic 20.0%
!!! CTAATTTTTCTTTCATCAAT+AGG - Chr3:75011577-75011596 MsG0380015786.01.T01:CDS 20.0%
!!! GATAAATTTTGACAACAATT+TGG - Chr3:75011436-75011455 MsG0380015786.01.T01:intron 20.0%
!!! GATTTTCCTAAAATGTATTT+TGG - Chr3:75013223-75013242 MsG0380015786.01.T01:intron 20.0%
!!! TAAAATAGTGGTTTTATGAT+TGG + Chr3:75013137-75013156 None:intergenic 20.0%
! AAAAGAAACATCATGGTTAT+TGG + Chr3:75013017-75013036 None:intergenic 25.0%
! AAATAAAGTAAACTCCACTA+AGG + Chr3:75012895-75012914 None:intergenic 25.0%
! AAATTGTGCATTCATTTATG+AGG - Chr3:75011542-75011561 MsG0380015786.01.T01:CDS 25.0%
! AACAACGCAATTCAAATATA+TGG - Chr3:75011465-75011484 MsG0380015786.01.T01:intron 25.0%
! ACTCAATTCAACAATAATCA+AGG - Chr3:75012612-75012631 MsG0380015786.01.T01:intron 25.0%
! CAATTGTTATAACATTAAGC+AGG - Chr3:75013647-75013666 MsG0380015786.01.T01:CDS 25.0%
! CTGCTTAATGTTATAACAAT+TGG + Chr3:75013649-75013668 None:intergenic 25.0%
! GGTTAATTGTCTTAAAATAG+TGG + Chr3:75013149-75013168 None:intergenic 25.0%
! GTAAATGGAAATCAATACTT+TGG - Chr3:75011884-75011903 MsG0380015786.01.T01:intron 25.0%
! GTTATTGAAATTATTACCAG+TGG + Chr3:75011025-75011044 None:intergenic 25.0%
! TCAACATTCTTTGTAACTAT+TGG + Chr3:75013058-75013077 None:intergenic 25.0%
! TCCAGCAAAAACTAAAAAAA+TGG - Chr3:75011795-75011814 MsG0380015786.01.T01:intron 25.0%
! TGCATACTAGTGATAATTTA+GGG + Chr3:75012061-75012080 None:intergenic 25.0%
! TTAAGATCAATTACGACTAA+TGG - Chr3:75012138-75012157 MsG0380015786.01.T01:CDS 25.0%
! TTATTAAATGAAGCATGAAG+TGG + Chr3:75012090-75012109 None:intergenic 25.0%
! TTGATATTGGCATAATGATT+TGG - Chr3:75012568-75012587 MsG0380015786.01.T01:intron 25.0%
! TTGCATACTAGTGATAATTT+AGG + Chr3:75012062-75012081 None:intergenic 25.0%
!! AAACTTACAAGTCATTGATT+GGG - Chr3:75013575-75013594 MsG0380015786.01.T01:CDS 25.0%
!! ATTAAGTTGTTTATCGAAAC+AGG + Chr3:75012165-75012184 None:intergenic 25.0%
!! CATGCAATTCTTTTTGTAAA+TGG - Chr3:75011869-75011888 MsG0380015786.01.T01:intron 25.0%
!! CATTGACCAAAATACATTTT+AGG + Chr3:75013232-75013251 None:intergenic 25.0%
!!! AATTTTGACAACAATTTGGA+TGG - Chr3:75011440-75011459 MsG0380015786.01.T01:intron 25.0%
!!! ATTTCTAGAATCTAGTTAGT+AGG - Chr3:75012225-75012244 MsG0380015786.01.T01:intron 25.0%
!!! GATTAATCTTACTACTTTTG+TGG - Chr3:75013186-75013205 MsG0380015786.01.T01:intron 25.0%
!!! GCTTTAAAAAAGAAACAGTA+AGG + Chr3:75012923-75012942 None:intergenic 25.0%
!!! GGAACTTATTTTTATTATGG+AGG - Chr3:75013687-75013706 MsG0380015786.01.T01:CDS 25.0%
!!! TATGCCTTTGTTGAATTTTT+TGG - Chr3:75012862-75012881 MsG0380015786.01.T01:CDS 25.0%
!!! TCCATTTTTTTAGTTTTTGC+TGG + Chr3:75011799-75011818 None:intergenic 25.0%
!!! TGGGGAACTTATTTTTATTA+TGG - Chr3:75013684-75013703 MsG0380015786.01.T01:CDS 25.0%
AAATCAATGCACAAGAAAAG+AGG + Chr3:75012401-75012420 None:intergenic 30.0%
AACTCACAAGGCTTATATAA+TGG - Chr3:75012668-75012687 MsG0380015786.01.T01:intron 30.0%
AAGTCATAAATTACACGAGA+AGG - Chr3:75011723-75011742 MsG0380015786.01.T01:intron 30.0%
AAGTGATGAATATTAGCAAG+AGG + Chr3:75013615-75013634 None:intergenic 30.0%
ACTAACAACAAGATAGCAAT+AGG - Chr3:75012504-75012523 MsG0380015786.01.T01:intron 30.0%
AGTATTCAGATCATTACCAA+AGG + Chr3:75011996-75012015 None:intergenic 30.0%
AGTTACAAAGAATGTTGAAC+AGG - Chr3:75013060-75013079 MsG0380015786.01.T01:intron 30.0%
ATACTACAACAATGGAGAAA+AGG - Chr3:75011154-75011173 MsG0380015786.01.T01:intron 30.0%
ATACTAGTGATAATTTAGGG+AGG + Chr3:75012058-75012077 None:intergenic 30.0%
CAAACATGTTTAGTCACTTA+AGG - Chr3:75013424-75013443 MsG0380015786.01.T01:intron 30.0%
CAAGAAAAGAGGTTGAAATA+AGG + Chr3:75012390-75012409 None:intergenic 30.0%
CTAACAACAAGATAGCAATA+GGG - Chr3:75012505-75012524 MsG0380015786.01.T01:intron 30.0%
CTGGAAAAGTTATACATGTT+TGG + Chr3:75011780-75011799 None:intergenic 30.0%
GAAACTTACAAGTCATTGAT+TGG - Chr3:75013574-75013593 MsG0380015786.01.T01:CDS 30.0%
GCAAGTTCTATCAAAAGATT+TGG - Chr3:75011272-75011291 MsG0380015786.01.T01:intron 30.0%
GTTCTATCAAAAGATTTGGA+AGG - Chr3:75011276-75011295 MsG0380015786.01.T01:intron 30.0%
TAAATCCTTCTTCTGCAAAA+TGG + Chr3:75013536-75013555 None:intergenic 30.0%
TAACAACAAGATAGCAATAG+GGG - Chr3:75012506-75012525 MsG0380015786.01.T01:intron 30.0%
TACTAGTGATAATTTAGGGA+GGG + Chr3:75012057-75012076 None:intergenic 30.0%
TATTCAACTTTGTCATTGAG+TGG + Chr3:75013273-75013292 None:intergenic 30.0%
TCTTGCTAATATTCATCACT+TGG - Chr3:75013614-75013633 MsG0380015786.01.T01:CDS 30.0%
TGTAAGCTATATCTTTCTTC+AGG - Chr3:75012269-75012288 MsG0380015786.01.T01:intron 30.0%
TTACTGACATTGAGTATGTT+TGG - Chr3:75010727-75010746 MsG0380015786.01.T01:intron 30.0%
TTGATCATCCTAAGCTTAAA+GGG - Chr3:75010993-75011012 MsG0380015786.01.T01:intron 30.0%
TTTGATCATCCTAAGCTTAA+AGG - Chr3:75010992-75011011 MsG0380015786.01.T01:intron 30.0%
! ATTGTTTTCATGAACGATCA+TGG + Chr3:75010857-75010876 None:intergenic 30.0%
! CTTGTACCTACATTGATTAT+TGG - Chr3:75011751-75011770 MsG0380015786.01.T01:intron 30.0%
! TATTGGCATAATGATTTGGA+AGG - Chr3:75012572-75012591 MsG0380015786.01.T01:intron 30.0%
! TTCTTTCCTATGTCTTTTCA+AGG + Chr3:75010355-75010374 None:intergenic 30.0%
! TTCTTTTTGCTTAACTCACA+AGG - Chr3:75012656-75012675 MsG0380015786.01.T01:intron 30.0%
!! TAATCTTACTACTTTTGTGG+TGG - Chr3:75013189-75013208 MsG0380015786.01.T01:intron 30.0%
!! TTGCTATCTTGTTGTTAGTT+TGG + Chr3:75012503-75012522 None:intergenic 30.0%
!!! CAGGCTTATTGATTTTTTTG+AGG + Chr3:75010653-75010672 None:intergenic 30.0%
!!! CTGTTTCTTTTTTAAAGCAG+TGG - Chr3:75012925-75012944 MsG0380015786.01.T01:CDS 30.0%
AAGAGACAAACAAACACAAG+TGG + Chr3:75011680-75011699 None:intergenic 35.0%
AAGTGACTAAACATGTTTGC+TGG + Chr3:75013423-75013442 None:intergenic 35.0%
AAGTGGACAATATGAGAGAA+TGG + Chr3:75010446-75010465 None:intergenic 35.0%
AATCATGGCAAATACACTTG+TGG + Chr3:75013170-75013189 None:intergenic 35.0%
AATGTCAGTAACAATGTCAC+TGG + Chr3:75010718-75010737 None:intergenic 35.0%
ACAGATGCATATCAAACAAC+TGG - Chr3:75012447-75012466 MsG0380015786.01.T01:intron 35.0%
ACTAACCAGACTTATAAAGC+AGG - Chr3:75010591-75010610 MsG0380015786.01.T01:CDS 35.0%
ACTAGTGATAATTTAGGGAG+GGG + Chr3:75012056-75012075 None:intergenic 35.0%
AGCAGGGTAATAACAATGTT+TGG - Chr3:75013664-75013683 MsG0380015786.01.T01:CDS 35.0%
ATCCAAGGTTCTTCACTTAT+TGG - Chr3:75012319-75012338 MsG0380015786.01.T01:intron 35.0%
ATTGTGAATGCTCGTTCTAA+GGG - Chr3:75013480-75013499 MsG0380015786.01.T01:CDS 35.0%
CAAACAAAAACAGGTAGCAT+AGG + Chr3:75010483-75010502 None:intergenic 35.0%
CAAGGCAAACATAAATGTGT+GGG - Chr3:75011910-75011929 MsG0380015786.01.T01:intron 35.0%
CAATCTATCAAATCACCATC+TGG + Chr3:75010947-75010966 None:intergenic 35.0%
CAGGGTAATAACAATGTTTG+GGG - Chr3:75013666-75013685 MsG0380015786.01.T01:CDS 35.0%
CAGTTTCCTTGAAAAGACAT+AGG - Chr3:75010346-75010365 MsG0380015786.01.T01:three_prime_UTR 35.0%
GAAATGCCCATGAAGATAAA+TGG - Chr3:75013725-75013744 MsG0380015786.01.T01:CDS 35.0%
GACAGAAAGTAAGAGGATTA+AGG - Chr3:75011101-75011120 MsG0380015786.01.T01:intron 35.0%
GAGGATTATTAGTTGGATAC+TGG - Chr3:75013397-75013416 MsG0380015786.01.T01:intron 35.0%
GCAGGGTAATAACAATGTTT+GGG - Chr3:75013665-75013684 MsG0380015786.01.T01:CDS 35.0%
GCTGAAAAATCATTGTGAAC+AGG - Chr3:75013341-75013360 MsG0380015786.01.T01:intron 35.0%
GTAAGAGGATTAAGGTTTAC+AGG - Chr3:75011109-75011128 MsG0380015786.01.T01:intron 35.0%
TCATATCCATCTGTTACATG+AGG + Chr3:75011938-75011957 None:intergenic 35.0%
TCTTCTGTTGTTCTTCTGAT+TGG + Chr3:75011239-75011258 None:intergenic 35.0%
TGCTACAACTTATTGTGTTC+AGG - Chr3:75012471-75012490 MsG0380015786.01.T01:intron 35.0%
TGGCATCCAATAATCAATGT+AGG + Chr3:75011760-75011779 None:intergenic 35.0%
TTAATGAGAAGTTTCAGCTG+TGG - Chr3:75011177-75011196 MsG0380015786.01.T01:intron 35.0%
TTCAATTAGCAGTGATCATG+AGG - Chr3:75011322-75011341 MsG0380015786.01.T01:intron 35.0%
TTTGAGAGACAGAAAGTAAG+AGG - Chr3:75011094-75011113 MsG0380015786.01.T01:intron 35.0%
! TGTTCTTTTCTTACTGGCAA+AGG + Chr3:75011625-75011644 None:intergenic 35.0%
! TTCACGCTTAACTTTTATGC+TGG - Chr3:75012948-75012967 MsG0380015786.01.T01:CDS 35.0%
!! AAATCAATACTTTGGAGCCA+AGG - Chr3:75011892-75011911 MsG0380015786.01.T01:intron 35.0%
!! AATTTAGCTTGTCCCAGATA+TGG - Chr3:75011957-75011976 MsG0380015786.01.T01:intron 35.0%
!! ATAAGTCTGGTTAGTCTTCA+AGG + Chr3:75010586-75010605 None:intergenic 35.0%
!! ATTGGTGCCATTTATCTTCA+TGG + Chr3:75013735-75013754 None:intergenic 35.0%
!! ATTTAGCTTGTCCCAGATAT+GGG - Chr3:75011958-75011977 MsG0380015786.01.T01:intron 35.0%
!! TAAGTCTGGTTAGTCTTCAA+GGG + Chr3:75010585-75010604 None:intergenic 35.0%
!! TAGTGCTGTTCTTTTCTTAC+TGG + Chr3:75011631-75011650 None:intergenic 35.0%
!! TATGCTGGTCTTACTGTATA+TGG - Chr3:75012963-75012982 MsG0380015786.01.T01:intron 35.0%
!! TATTTTTATTATGGAGGCCC+TGG - Chr3:75013693-75013712 MsG0380015786.01.T01:CDS 35.0%
!! TTGGTGCCATTTATCTTCAT+GGG + Chr3:75013734-75013753 None:intergenic 35.0%
!!! CCTTTGTTGAATTTTTTGGC+GGG - Chr3:75012866-75012885 MsG0380015786.01.T01:CDS 35.0%
!!! CTTTGTTGAATTTTTTGGCG+GGG - Chr3:75012867-75012886 MsG0380015786.01.T01:CDS 35.0%
!!! GCCTTTGTTGAATTTTTTGG+CGG - Chr3:75012865-75012884 MsG0380015786.01.T01:CDS 35.0%
!!! TATGGTGTTGTCTTTTTGTG+TGG + Chr3:75010395-75010414 None:intergenic 35.0%
!!! TTGTGTACATGCTTGTTTTG+AGG + Chr3:75010421-75010440 None:intergenic 35.0%
!!! TTTGTTGAATTTTTTGGCGG+GGG - Chr3:75012868-75012887 MsG0380015786.01.T01:CDS 35.0%
AACCGTGGACAGTTTGATAT+TGG - Chr3:75012555-75012574 MsG0380015786.01.T01:intron 40.0%
ACAAAAACAGGTAGCATAGG+TGG + Chr3:75010480-75010499 None:intergenic 40.0%
ACGGTTATAAGCTGATGTAG+GGG + Chr3:75012541-75012560 None:intergenic 40.0%
ACTACCTTAACAGACAGTGA+AGG - Chr3:75011647-75011666 MsG0380015786.01.T01:intron 40.0%
ACTTTGTATCAGAGTCCAGA+TGG - Chr3:75010929-75010948 MsG0380015786.01.T01:intron 40.0%
AGCTTAGGATGATCAAAAGC+TGG + Chr3:75010989-75011008 None:intergenic 40.0%
CACGGTTATAAGCTGATGTA+GGG + Chr3:75012542-75012561 None:intergenic 40.0%
CATGCAAGCATGGTACAATT+TGG - Chr3:75013450-75013469 MsG0380015786.01.T01:CDS 40.0%
CCAAAGGGATACTACAACAA+TGG - Chr3:75011146-75011165 MsG0380015786.01.T01:intron 40.0%
CCAAGGCAAACATAAATGTG+TGG - Chr3:75011909-75011928 MsG0380015786.01.T01:intron 40.0%
CCACACATTTATGTTTGCCT+TGG + Chr3:75011912-75011931 None:intergenic 40.0%
CCATTGTTGTAGTATCCCTT+TGG + Chr3:75011149-75011168 None:intergenic 40.0%
CCCGCCAAAAAATTCAACAA+AGG + Chr3:75012869-75012888 None:intergenic 40.0%
CTAATTGAATCTCTCCGTAC+AGG + Chr3:75011311-75011330 None:intergenic 40.0%
CTACCTTAACAGACAGTGAA+GGG - Chr3:75011648-75011667 MsG0380015786.01.T01:intron 40.0%
CTGAACCTGCTTTATAAGTC+TGG + Chr3:75010599-75010618 None:intergenic 40.0%
CTTACTGGCAAAGGAAATGT+GGG + Chr3:75011616-75011635 None:intergenic 40.0%
GAAGGAAACCAAAACCTGTA+CGG - Chr3:75011294-75011313 MsG0380015786.01.T01:intron 40.0%
GAGTACGGAGGATTATTAGT+TGG - Chr3:75013390-75013409 MsG0380015786.01.T01:intron 40.0%
GATTGTGAATGCTCGTTCTA+AGG - Chr3:75013479-75013498 MsG0380015786.01.T01:CDS 40.0%
GGCATTTCACATTTCTTCCA+GGG + Chr3:75013713-75013732 None:intergenic 40.0%
GGTTTATGCCCTTTAAGCTT+AGG + Chr3:75011004-75011023 None:intergenic 40.0%
GTCCAATAAGTGAAGAACCT+TGG + Chr3:75012324-75012343 None:intergenic 40.0%
TAGTTGTCACCATACAGTTC+TGG + Chr3:75012300-75012319 None:intergenic 40.0%
TCAATGTGTCTCTACTCTAG+TGG - Chr3:75013246-75013265 MsG0380015786.01.T01:intron 40.0%
TCTTACTGGCAAAGGAAATG+TGG + Chr3:75011617-75011636 None:intergenic 40.0%
TGCCAATATCAAACTGTCCA+CGG + Chr3:75012560-75012579 None:intergenic 40.0%
TGTATGGTGACAACTATCCA+AGG - Chr3:75012304-75012323 MsG0380015786.01.T01:intron 40.0%
TTACTGGCAAAGGAAATGTG+GGG + Chr3:75011615-75011634 None:intergenic 40.0%
! GATCTGAATACTCTAGAAGC+TGG - Chr3:75012004-75012023 MsG0380015786.01.T01:intron 40.0%
! TAGGGAGGGGAAAAAGTATA+TGG + Chr3:75012043-75012062 None:intergenic 40.0%
! TGAATACTCTAGAAGCTGGT+TGG - Chr3:75012008-75012027 MsG0380015786.01.T01:intron 40.0%
!! AAGTCTGGTTAGTCTTCAAG+GGG + Chr3:75010584-75010603 None:intergenic 40.0%
!! TCTTACTACTTTTGTGGTGG+TGG - Chr3:75013192-75013211 MsG0380015786.01.T01:intron 40.0%
!!! ATGCTTGTTTTGAGGCAGTA+TGG + Chr3:75010413-75010432 None:intergenic 40.0%
AGCCAGCAATAACCCATATC+TGG + Chr3:75011973-75011992 None:intergenic 45.0%
CAGGTAAGTCCAGAACTGTA+TGG - Chr3:75012288-75012307 MsG0380015786.01.T01:intron 45.0%
CCACGGTTATAAGCTGATGT+AGG + Chr3:75012543-75012562 None:intergenic 45.0%
CCTACATCAGCTTATAACCG+TGG - Chr3:75012540-75012559 MsG0380015786.01.T01:intron 45.0%
CTGATTGGAACAGTTCCTTC+TGG + Chr3:75011224-75011243 None:intergenic 45.0%
CTTAAGGAGTCATGCAAGCA+TGG - Chr3:75013440-75013459 MsG0380015786.01.T01:CDS 45.0%
GCAAGCATGGTACAATTTGG+TGG - Chr3:75013453-75013472 MsG0380015786.01.T01:CDS 45.0%
GCCAGCAATAACCCATATCT+GGG + Chr3:75011972-75011991 None:intergenic 45.0%
GGGCATTTCACATTTCTTCC+AGG + Chr3:75013714-75013733 None:intergenic 45.0%
GTGTGGTGTGCTACACAATA+TGG + Chr3:75010378-75010397 None:intergenic 45.0%
GTTTACAGGATCCACCAGAA+AGG - Chr3:75011123-75011142 MsG0380015786.01.T01:intron 45.0%
TACCACACCGACACTCAAAT+GGG - Chr3:75013504-75013523 MsG0380015786.01.T01:CDS 45.0%
TCTGGTGAAGAATGTCCAGA+AGG - Chr3:75011206-75011225 MsG0380015786.01.T01:intron 45.0%
TGATGAGAGTGAGACAATGC+TGG + Chr3:75010537-75010556 None:intergenic 45.0%
TGTCCCTTCACTGTCTGTTA+AGG + Chr3:75011654-75011673 None:intergenic 45.0%
TGTGAACAGGATCCAAAGCA+TGG - Chr3:75013354-75013373 MsG0380015786.01.T01:intron 45.0%
TTACCACACCGACACTCAAA+TGG - Chr3:75013503-75013522 MsG0380015786.01.T01:CDS 45.0%
! GAATCTCTCCGTACAGGTTT+TGG + Chr3:75011305-75011324 None:intergenic 45.0%
! GCTTAAAGGGCATAAACCAC+TGG - Chr3:75011006-75011025 MsG0380015786.01.T01:intron 45.0%
! GTGGCTAGAATCTGAGACAA+TGG + Chr3:75010562-75010581 None:intergenic 45.0%
! TAGTATCCCTTTGGCCTTTC+TGG + Chr3:75011140-75011159 None:intergenic 45.0%
! TCCCAGATATGGGTTATTGC+TGG - Chr3:75011968-75011987 MsG0380015786.01.T01:intron 45.0%
! TTTCAGCTGTGGACTGATTC+TGG - Chr3:75011188-75011207 MsG0380015786.01.T01:intron 45.0%
!! AGTGGCCATTTTGCAGAAGA+AGG - Chr3:75013528-75013547 MsG0380015786.01.T01:CDS 45.0%
!!! ACTACTTTTGTGGTGGTGGT+TGG - Chr3:75013196-75013215 MsG0380015786.01.T01:intron 45.0%
!!! AGGTGGAGTGTTTTGAGAAG+TGG + Chr3:75010463-75010482 None:intergenic 45.0%
!! AAAATATTAAAAATAAACAA+AGG + Chr3:75012114-75012133 None:intergenic 5.0%
!! AATATTAATATAACATAAAA+AGG + Chr3:75012819-75012838 None:intergenic 5.0%
!! CTATAATAAAATAATTAAAT+TGG + Chr3:75013753-75013772 None:intergenic 5.0%
!!! CAATTTAATTATTTTATTAT+AGG - Chr3:75013751-75013770 MsG0380015786.01.T01:CDS 5.0%
AACCACCAGTGTCCATGCTT+TGG + Chr3:75013369-75013388 None:intergenic 50.0%
ACCGACACTCAAATGGGAAG+TGG - Chr3:75013510-75013529 MsG0380015786.01.T01:CDS 50.0%
AGGATCCAAAGCATGGACAC+TGG - Chr3:75013361-75013380 MsG0380015786.01.T01:intron 50.0%
ATCCAAAGCATGGACACTGG+TGG - Chr3:75013364-75013383 MsG0380015786.01.T01:intron 50.0%
GATCCACCAGAAAGGCCAAA+GGG - Chr3:75011131-75011150 MsG0380015786.01.T01:intron 50.0%
GCCACTTCCCATTTGAGTGT+CGG + Chr3:75013514-75013533 None:intergenic 50.0%
GCCTGAATTGTCTTCACAGC+AGG + Chr3:75010672-75010691 None:intergenic 50.0%
GCCTGCTGTGAAGACAATTC+AGG - Chr3:75010668-75010687 MsG0380015786.01.T01:CDS 50.0%
GGACACTGGTGGTTAGAGTA+CGG - Chr3:75013375-75013394 MsG0380015786.01.T01:intron 50.0%
TGGGCACCTCATGTAACAGA+TGG - Chr3:75011929-75011948 MsG0380015786.01.T01:intron 50.0%
! TACTCTAGAAGCTGGTTGGC+AGG - Chr3:75012012-75012031 MsG0380015786.01.T01:intron 50.0%
! TATCCCTTTGGCCTTTCTGG+TGG + Chr3:75011137-75011156 None:intergenic 50.0%
!! TCTGGTTAGTCTTCAAGGGG+TGG + Chr3:75010581-75010600 None:intergenic 50.0%
!! TGGGTTATTGCTGGCTCCTT+TGG - Chr3:75011977-75011996 MsG0380015786.01.T01:intron 50.0%
!! TTCCCATTTGAGTGTCGGTG+TGG + Chr3:75013509-75013528 None:intergenic 50.0%
!!! TTTTGTGGTGGTGGTTGGTG+TGG - Chr3:75013201-75013220 MsG0380015786.01.T01:intron 50.0%
CACTGGTGGTTAGAGTACGG+AGG - Chr3:75013378-75013397 MsG0380015786.01.T01:intron 55.0%
GGATCCACCAGAAAGGCCAA+AGG - Chr3:75011130-75011149 MsG0380015786.01.T01:intron 55.0%
!! TTTTTGGCGGGGGACCTTAG+TGG - Chr3:75012878-75012897 MsG0380015786.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr3 gene 75010327 75013780 75010327 ID=MsG0380015786.01;Name=MsG0380015786.01
Chr3 mRNA 75010327 75013780 75010327 ID=MsG0380015786.01.T01;Parent=MsG0380015786.01;Name=MsG0380015786.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0.6|0.33|1|1|1|6|43|426
Chr3 exon 75010327 75010744 75010327 ID=MsG0380015786.01.T01:exon:981;Parent=MsG0380015786.01.T01
Chr3 exon 75011514 75011614 75011514 ID=MsG0380015786.01.T01:exon:980;Parent=MsG0380015786.01.T01
Chr3 exon 75012082 75012238 75012082 ID=MsG0380015786.01.T01:exon:979;Parent=MsG0380015786.01.T01
Chr3 exon 75012764 75012976 75012764 ID=MsG0380015786.01.T01:exon:978;Parent=MsG0380015786.01.T01
Chr3 exon 75013080 75013166 75013080 ID=MsG0380015786.01.T01:exon:977;Parent=MsG0380015786.01.T01
Chr3 exon 75013433 75013780 75013433 ID=MsG0380015786.01.T01:exon:976;Parent=MsG0380015786.01.T01
Chr3 CDS 75013433 75013780 75013433 ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01
Chr3 CDS 75013080 75013166 75013080 ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01
Chr3 CDS 75012764 75012976 75012764 ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01
Chr3 CDS 75012082 75012238 75012082 ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01
Chr3 CDS 75011514 75011614 75011514 ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01
Chr3 CDS 75010370 75010744 75010370 ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01
Chr3 three_prime_UTR 75010327 75010369 75010327 ID=MsG0380015786.01.T01:three_prime_utr;Parent=MsG0380015786.01.T01
Gene Sequence

>MsG0380015786.01.T01

ATGGAAGCAAAGGAATACTCAGTTTCCTTGAAAAGACATAGGAAAGAACCATATTGTGTAGCACACCACACAAAAAGACAACACCATACTGCCTCAAAACAAGCATGTACACAAAACCATTCTCTCATATTGTCCACTTCTCAAAACACTCCACCTATGCTACCTGTTTTTGTTTGTTTATTGTTACTTCTTCTTACTTCAACTACACCAGCATTGTCTCACTCTCATCACTCCATTGTCTCAGATTCTAGCCACCCCTTGAAGACTAACCAGACTTATAAAGCAGGTTCAGAGTTGCTTAAGTTAATAAGAATCAGAACTCACCTCAAAAAAATCAATAAGCCTGCTAGTCCAGATGGTGATTTGATAGATTGTGTTTTATCTCATCAACAACCAGCTTTTGATCATCCTAAGCTTAAAGGGCATAAACCACTGGATCCACCAGAAAGGCCAAAGGGATACTACAACAATGGAGAAAAGGTTAATGAGAAGTTTCAGCTGTGGACTGATTCTGGTGAAGAATGTCCAGAAGGAACTGTTCCAATCAGAAGAACAACAGAAGATGATATTCTAAGAGCAAGTTCTATCAAAAGATTTGGAAGGAAACCAAAACCTGTACGGAGAGATTCAATTAGCAGTGATCATGAGCATGCAATTCTTTTTGTAAATGGAAATCAATACTTTGGAGCCAAGGCAAACATAAATGTGTGGGCACCTCATGTAACAGATGGATATGAATTTAGCTTGTCCCAGATATGGGTTATTGCTGGCTCCTTTGGTAATGATCTGAATACTCTAGAAGCTGGCTTTATCCAAACTAACAACAAGATAGCAATAGGGGCAACAATCTCCCCTACATCAGCTTATAACCGTGGACAGTTTGATATTGGCATAATGATTTGGAAGGATCCAAAGCATGGACACTGGTGGTTAGAGTACGGAGGATTATTAGTTGGATACTGGCCAGCAAACATGTTTAGTCACTTAAGGAGTCATGCAAGCATGGTACAATTTGGTGGAGAGATTGTGAATGCTCGTTCTAAGGGTTACCACACCGACACTCAAATGGGAAGTGGCCATTTTGCAGAAGAAGGATTTAAAAAAGCAGCTTATTTTAGAAACTTACAAGTCATTGATTGGGACAATAACTTACTTCCTCTTGCTAATATTCATCACTTGGCTGATCATTCCAATTGTTATAACATTAAGCAGGGTAATAACAATGTTTGGGGAACTTATTTTTATTATGGAGGCCCTGGAAGAAATGTGAAATGCCCATGA

Protein sequence

>MsG0380015786.01.T01

MEAKEYSVSLKRHRKEPYCVAHHTKRQHHTASKQACTQNHSLILSTSQNTPPMLPVFVCLLLLLLTSTTPALSHSHHSIVSDSSHPLKTNQTYKAGSELLKLIRIRTHLKKINKPASPDGDLIDCVLSHQQPAFDHPKLKGHKPLDPPERPKGYYNNGEKVNEKFQLWTDSGEECPEGTVPIRRTTEDDILRASSIKRFGRKPKPVRRDSISSDHEHAILFVNGNQYFGAKANINVWAPHVTDGYEFSLSQIWVIAGSFGNDLNTLEAGFIQTNNKIAIGATISPTSAYNRGQFDIGIMIWKDPKHGHWWLEYGGLLVGYWPANMFSHLRSHASMVQFGGEIVNARSKGYHTDTQMGSGHFAEEGFKKAAYFRNLQVIDWDNNLLPLANIHHLADHSNCYNIKQGNNNVWGTYFYYGGPGRNVKCP*