Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015786.01.T01 | XP_003601229.2 | 86.724 | 467 | 19 | 3 | 1 | 426 | 32 | 496 | 0 | 796 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015786.01.T01 | A0A396ITM3 | 86.724 | 467 | 19 | 3 | 1 | 426 | 32 | 496 | 0.0 | 796 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048856.01 | MsG0380015786.01 | 0.811647 | 6.305852e-51 | 3.924650e-48 |
MsG0180001892.01 | MsG0380015786.01 | 0.831733 | 1.412211e-55 | 1.546140e-52 |
MsG0180002409.01 | MsG0380015786.01 | 0.828494 | 8.715311e-55 | 8.677078e-52 |
MsG0180003403.01 | MsG0380015786.01 | 0.826764 | 2.267609e-54 | 2.146471e-51 |
MsG0180003943.01 | MsG0380015786.01 | 0.802875 | 4.558110e-49 | 2.257810e-46 |
MsG0180003951.01 | MsG0380015786.01 | 0.839087 | 1.953837e-57 | 2.669265e-54 |
MsG0180004249.01 | MsG0380015786.01 | 0.840241 | 9.787794e-58 | 1.385762e-54 |
MsG0180005153.01 | MsG0380015786.01 | 0.814719 | 1.335288e-51 | 9.027908e-49 |
MsG0180006024.01 | MsG0380015786.01 | 0.805034 | 1.622243e-49 | 8.493723e-47 |
MsG0280006405.01 | MsG0380015786.01 | 0.811707 | 6.119708e-51 | 3.815008e-48 |
MsG0280010650.01 | MsG0380015786.01 | 0.815453 | 9.172951e-52 | 6.327167e-49 |
MsG0280010736.01 | MsG0380015786.01 | 0.809345 | 1.981000e-50 | 1.160274e-47 |
MsG0280010778.01 | MsG0380015786.01 | 0.801296 | 9.627680e-49 | 4.581464e-46 |
MsG0280010788.01 | MsG0380015786.01 | 0.822770 | 1.983435e-53 | 1.675967e-50 |
MsG0280010992.01 | MsG0380015786.01 | 0.821200 | 4.581552e-53 | 3.703041e-50 |
MsG0280011101.01 | MsG0380015786.01 | 0.806362 | 8.535573e-50 | 4.623779e-47 |
MsG0280011341.01 | MsG0380015786.01 | 0.812019 | 5.231844e-51 | 3.288970e-48 |
MsG0380011496.01 | MsG0380015786.01 | 0.824093 | 9.729618e-54 | 8.533490e-51 |
MsG0380011501.01 | MsG0380015786.01 | 0.827782 | 1.293331e-54 | 1.261066e-51 |
MsG0380012067.01 | MsG0380015786.01 | 0.806633 | 7.480653e-50 | 4.080384e-47 |
MsG0380013475.01 | MsG0380015786.01 | 0.810163 | 1.321267e-50 | 7.907007e-48 |
MsG0380013476.01 | MsG0380015786.01 | 0.805566 | 1.255041e-49 | 6.661483e-47 |
MsG0380014097.01 | MsG0380015786.01 | 0.807560 | 4.763258e-50 | 2.661360e-47 |
MsG0380014495.01 | MsG0380015786.01 | 0.822436 | 2.371777e-53 | 1.985141e-50 |
MsG0380014498.01 | MsG0380015786.01 | 0.801518 | 8.670738e-49 | 4.149220e-46 |
MsG0380015332.01 | MsG0380015786.01 | 0.835865 | 1.307972e-56 | 1.620059e-53 |
MsG0380015463.01 | MsG0380015786.01 | 0.810293 | 1.238550e-50 | 7.437110e-48 |
MsG0380015555.01 | MsG0380015786.01 | 0.820231 | 7.650034e-53 | 6.018398e-50 |
MsG0380015716.01 | MsG0380015786.01 | 0.805149 | 1.534313e-49 | 8.057432e-47 |
MsG0380015786.01 | MsG0380015944.01 | 0.828439 | 8.985067e-55 | 8.931484e-52 |
MsG0380015786.01 | MsG0380016247.01 | 0.826021 | 3.408740e-54 | 3.159148e-51 |
MsG0380015786.01 | MsG0380016893.01 | 0.816969 | 4.204587e-52 | 3.023152e-49 |
MsG0380015786.01 | MsG0480019350.01 | 0.815424 | 9.310828e-52 | 6.416872e-49 |
MsG0380015786.01 | MsG0480020739.01 | 0.802326 | 5.916016e-49 | 2.889877e-46 |
MsG0380015786.01 | MsG0480020780.01 | 0.806257 | 8.979270e-50 | 4.851505e-47 |
MsG0380015786.01 | MsG0480020909.01 | 0.807486 | 4.937971e-50 | 2.753844e-47 |
MsG0380015786.01 | MsG0480021056.01 | 0.801147 | 1.032544e-48 | 4.895177e-46 |
MsG0380015786.01 | MsG0480022045.01 | 0.807995 | 3.848364e-50 | 2.174878e-47 |
MsG0380015786.01 | MsG0480023172.01 | 0.813529 | 2.443962e-51 | 1.600036e-48 |
MsG0380015786.01 | MsG0480024022.01 | 0.805288 | 1.435384e-49 | 7.564605e-47 |
MsG0380015786.01 | MsG0580024463.01 | 0.834229 | 3.381262e-56 | 3.987308e-53 |
MsG0380015786.01 | MsG0580025357.01 | -0.800225 | 1.592535e-48 | 7.375340e-46 |
MsG0380015786.01 | MsG0580025407.01 | -0.807131 | 5.870528e-50 | 3.243712e-47 |
MsG0380015786.01 | MsG0580027925.01 | 0.825951 | 3.543071e-54 | 3.277147e-51 |
MsG0380015786.01 | MsG0580028436.01 | 0.821869 | 3.209798e-53 | 2.643401e-50 |
MsG0380015786.01 | MsG0580029236.01 | 0.814629 | 1.397580e-51 | 9.426317e-49 |
MsG0380015786.01 | MsG0580029736.01 | 0.811733 | 6.040041e-51 | 3.768125e-48 |
MsG0380015786.01 | MsG0680031617.01 | 0.814902 | 1.215994e-51 | 8.261641e-49 |
MsG0380015786.01 | MsG0680031762.01 | 0.804394 | 2.206065e-49 | 1.136144e-46 |
MsG0380015786.01 | MsG0780036297.01 | 0.811464 | 6.909308e-51 | 4.279910e-48 |
MsG0380015786.01 | MsG0780036593.01 | 0.807106 | 5.943450e-50 | 3.281790e-47 |
MsG0380015786.01 | MsG0780036602.01 | 0.809351 | 1.975408e-50 | 1.157196e-47 |
MsG0380015786.01 | MsG0780036757.01 | 0.843184 | 1.637395e-58 | 2.541232e-55 |
MsG0380015786.01 | MsG0780037054.01 | 0.824385 | 8.307625e-54 | 7.346985e-51 |
MsG0380015786.01 | MsG0780037372.01 | 0.807022 | 6.193071e-50 | 3.412287e-47 |
MsG0380015786.01 | MsG0780037460.01 | 0.814956 | 1.182995e-51 | 8.049305e-49 |
MsG0380015786.01 | MsG0780039443.01 | 0.830937 | 2.216540e-55 | 2.369929e-52 |
MsG0380015786.01 | MsG0780040846.01 | 0.808220 | 3.447773e-50 | 1.960108e-47 |
MsG0380015786.01 | MsG0780041083.01 | 0.815593 | 8.537497e-52 | 5.911454e-49 |
MsG0380015786.01 | MsG0780041448.01 | 0.836074 | 1.158093e-56 | 1.443584e-53 |
MsG0380015786.01 | MsG0780041487.01 | 0.805301 | 1.426112e-49 | 7.518297e-47 |
MsG0380015786.01 | MsG0780041699.01 | 0.812399 | 4.324452e-51 | 2.746824e-48 |
MsG0380015786.01 | MsG0880041863.01 | 0.813712 | 2.228171e-51 | 1.465998e-48 |
MsG0380015786.01 | MsG0880042091.01 | 0.823298 | 1.493810e-53 | 1.281104e-50 |
MsG0380015786.01 | MsG0880043157.01 | 0.800537 | 1.376063e-48 | 6.423279e-46 |
MsG0380015786.01 | MsG0880045294.01 | 0.811702 | 6.135778e-51 | 3.824461e-48 |
MsG0380015786.01 | MsG0880045607.01 | 0.823591 | 1.275687e-53 | 1.103177e-50 |
MsG0280007432.01 | MsG0380015786.01 | 0.816672 | 4.902490e-52 | 3.496083e-49 |
MsG0280007506.01 | MsG0380015786.01 | 0.819145 | 1.354239e-52 | 1.033627e-49 |
MsG0280007955.01 | MsG0380015786.01 | 0.843440 | 1.399336e-58 | 2.189601e-55 |
MsG0280008391.01 | MsG0380015786.01 | 0.808845 | 2.534633e-50 | 1.464743e-47 |
MsG0280008395.01 | MsG0380015786.01 | 0.803295 | 3.732073e-49 | 1.868506e-46 |
MsG0280008457.01 | MsG0380015786.01 | 0.806383 | 8.447191e-50 | 4.578408e-47 |
MsG0280009794.01 | MsG0380015786.01 | 0.801877 | 7.318900e-49 | 3.534455e-46 |
MsG0280010350.01 | MsG0380015786.01 | 0.809029 | 2.315968e-50 | 1.344952e-47 |
MsG0280010366.01 | MsG0380015786.01 | 0.814479 | 1.508833e-51 | 1.013579e-48 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0380015786.01 | MsG0280009417.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015786.01.T01 | MTR_3g077430 | 86.724 | 467 | 19 | 3 | 1 | 426 | 1 | 465 | 0.0 | 795 |
MsG0380015786.01.T01 | MTR_4g105400 | 73.775 | 347 | 54 | 2 | 117 | 426 | 12 | 358 | 0.0 | 540 |
MsG0380015786.01.T01 | MTR_5g033650 | 63.836 | 365 | 87 | 6 | 105 | 426 | 4 | 366 | 2.46e-164 | 466 |
MsG0380015786.01.T01 | MTR_8g069575 | 58.915 | 387 | 115 | 5 | 83 | 426 | 26 | 411 | 9.39e-163 | 464 |
MsG0380015786.01.T01 | MTR_8g069600 | 52.381 | 378 | 130 | 5 | 97 | 426 | 18 | 393 | 1.11e-133 | 390 |
MsG0380015786.01.T01 | MTR_8g069610 | 48.086 | 418 | 165 | 8 | 52 | 426 | 6 | 414 | 7.44e-131 | 383 |
MsG0380015786.01.T01 | MTR_3g095890 | 44.766 | 449 | 172 | 11 | 23 | 425 | 15 | 433 | 6.85e-123 | 363 |
MsG0380015786.01.T01 | MTR_7g116420 | 49.105 | 391 | 134 | 9 | 100 | 425 | 49 | 439 | 8.65e-121 | 358 |
MsG0380015786.01.T01 | MTR_1g079730 | 47.631 | 401 | 136 | 10 | 100 | 426 | 51 | 451 | 3.84e-117 | 350 |
MsG0380015786.01.T01 | MTR_8g088510 | 46.859 | 382 | 143 | 9 | 103 | 425 | 35 | 415 | 8.24e-117 | 347 |
MsG0380015786.01.T01 | MTR_2g062610 | 47.165 | 388 | 143 | 9 | 100 | 426 | 40 | 426 | 6.28e-115 | 343 |
MsG0380015786.01.T01 | MTR_8g069720 | 43.405 | 417 | 173 | 10 | 56 | 426 | 8 | 407 | 1.28e-112 | 337 |
MsG0380015786.01.T01 | MTR_8g069580 | 48.219 | 365 | 125 | 5 | 105 | 426 | 51 | 394 | 1.26e-111 | 333 |
MsG0380015786.01.T01 | MTR_8g069715 | 46.070 | 369 | 144 | 9 | 105 | 426 | 50 | 410 | 6.01e-103 | 312 |
MsG0380015786.01.T01 | MTR_8g069640 | 42.439 | 410 | 184 | 10 | 56 | 425 | 7 | 404 | 8.12e-103 | 311 |
MsG0380015786.01.T01 | MTR_2g062610 | 49.351 | 308 | 108 | 6 | 166 | 426 | 30 | 336 | 1.72e-100 | 303 |
MsG0380015786.01.T01 | MTR_8g069660 | 43.210 | 405 | 183 | 12 | 58 | 426 | 7 | 400 | 2.40e-100 | 305 |
MsG0380015786.01.T01 | MTR_2g062610 | 49.351 | 308 | 108 | 6 | 166 | 426 | 37 | 343 | 2.88e-100 | 303 |
MsG0380015786.01.T01 | MTR_8g069590 | 49.664 | 298 | 112 | 3 | 166 | 426 | 9 | 305 | 6.76e-100 | 300 |
MsG0380015786.01.T01 | MTR_2g093840 | 45.317 | 331 | 123 | 12 | 142 | 426 | 42 | 360 | 6.62e-80 | 251 |
MsG0380015786.01.T01 | MTR_2g073040 | 46.565 | 262 | 92 | 7 | 83 | 302 | 14 | 269 | 1.54e-68 | 219 |
MsG0380015786.01.T01 | MTR_2g073020 | 42.642 | 265 | 107 | 4 | 79 | 302 | 22 | 282 | 8.51e-63 | 204 |
MsG0380015786.01.T01 | MTR_6g012620 | 34.250 | 400 | 193 | 11 | 93 | 426 | 15 | 410 | 3.09e-61 | 204 |
MsG0380015786.01.T01 | MTR_3g104000 | 34.974 | 386 | 179 | 11 | 104 | 421 | 30 | 411 | 1.28e-57 | 195 |
MsG0380015786.01.T01 | MTR_3g104030 | 33.929 | 392 | 188 | 11 | 94 | 422 | 27 | 410 | 2.41e-56 | 191 |
MsG0380015786.01.T01 | MTR_3g104070 | 33.085 | 402 | 181 | 15 | 94 | 421 | 29 | 416 | 1.63e-54 | 187 |
MsG0380015786.01.T01 | MTR_3g103980 | 32.564 | 390 | 191 | 11 | 104 | 426 | 51 | 435 | 6.64e-54 | 186 |
MsG0380015786.01.T01 | MTR_8g069695 | 36.437 | 247 | 121 | 4 | 216 | 426 | 13 | 259 | 4.18e-51 | 173 |
MsG0380015786.01.T01 | MTR_8g069630 | 55.814 | 129 | 56 | 1 | 299 | 426 | 1 | 129 | 2.51e-47 | 159 |
MsG0380015786.01.T01 | MTR_1g016910 | 31.856 | 361 | 179 | 11 | 130 | 426 | 63 | 420 | 3.91e-47 | 167 |
MsG0380015786.01.T01 | MTR_3g104030 | 32.710 | 321 | 152 | 8 | 162 | 422 | 30 | 346 | 9.90e-44 | 156 |
MsG0380015786.01.T01 | MTR_8g069665 | 57.955 | 88 | 35 | 1 | 115 | 202 | 107 | 192 | 1.19e-30 | 117 |
MsG0380015786.01.T01 | MTR_8g040850 | 27.342 | 395 | 209 | 14 | 88 | 422 | 14 | 390 | 4.61e-29 | 117 |
MsG0380015786.01.T01 | MTR_5g078580 | 29.503 | 322 | 172 | 8 | 97 | 375 | 28 | 337 | 1.18e-28 | 116 |
MsG0380015786.01.T01 | MTR_8g040890 | 26.786 | 392 | 209 | 12 | 103 | 420 | 31 | 418 | 2.46e-26 | 110 |
MsG0380015786.01.T01 | MTR_3g108680 | 25.269 | 372 | 202 | 11 | 40 | 375 | 3 | 334 | 1.88e-25 | 107 |
MsG0380015786.01.T01 | MTR_2g073050 | 57.746 | 71 | 29 | 1 | 356 | 426 | 1 | 70 | 5.06e-24 | 95.1 |
MsG0380015786.01.T01 | MTR_2g046390 | 29.487 | 312 | 180 | 14 | 120 | 420 | 43 | 325 | 2.48e-23 | 100 |
MsG0380015786.01.T01 | MTR_2g046390 | 27.221 | 349 | 181 | 14 | 121 | 420 | 44 | 368 | 1.09e-21 | 96.3 |
MsG0380015786.01.T01 | MTR_8g104480 | 26.087 | 345 | 193 | 14 | 123 | 420 | 8 | 337 | 4.56e-20 | 91.3 |
MsG0380015786.01.T01 | MTR_8g069750 | 47.727 | 88 | 43 | 3 | 269 | 353 | 185 | 272 | 6.15e-20 | 89.7 |
MsG0380015786.01.T01 | MTR_5g094280 | 28.409 | 264 | 146 | 7 | 100 | 329 | 24 | 278 | 1.25e-19 | 89.7 |
MsG0380015786.01.T01 | MTR_8g012985 | 33.333 | 168 | 99 | 7 | 263 | 420 | 73 | 237 | 6.59e-18 | 83.2 |
MsG0380015786.01.T01 | MTR_7g072230 | 32.298 | 161 | 94 | 7 | 269 | 418 | 49 | 205 | 2.63e-16 | 77.8 |
MsG0380015786.01.T01 | MTR_2g046430 | 30.516 | 213 | 130 | 11 | 223 | 422 | 33 | 240 | 2.12e-14 | 72.8 |
MsG0380015786.01.T01 | MTR_2g046520 | 29.098 | 244 | 119 | 12 | 227 | 422 | 3 | 240 | 7.40e-14 | 71.2 |
MsG0380015786.01.T01 | MTR_8g069950 | 65.909 | 44 | 15 | 0 | 264 | 307 | 68 | 111 | 2.42e-13 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015786.01.T01 | AT5G50150 | 63.281 | 384 | 95 | 6 | 87 | 426 | 39 | 420 | 4.75e-175 | 496 |
MsG0380015786.01.T01 | AT1G23340 | 56.796 | 412 | 124 | 6 | 57 | 426 | 10 | 409 | 1.02e-165 | 472 |
MsG0380015786.01.T01 | AT1G23340 | 56.796 | 412 | 124 | 6 | 57 | 426 | 10 | 409 | 1.02e-165 | 472 |
MsG0380015786.01.T01 | AT1G70550 | 60.686 | 379 | 106 | 4 | 90 | 426 | 88 | 465 | 4.61e-165 | 472 |
MsG0380015786.01.T01 | AT1G10750 | 59.631 | 379 | 110 | 4 | 90 | 426 | 90 | 467 | 1.37e-163 | 469 |
MsG0380015786.01.T01 | AT1G55360 | 48.101 | 395 | 144 | 10 | 92 | 426 | 29 | 422 | 2.46e-122 | 362 |
MsG0380015786.01.T01 | AT3G13510 | 44.393 | 428 | 156 | 10 | 57 | 426 | 16 | 419 | 1.14e-120 | 357 |
MsG0380015786.01.T01 | AT5G56530 | 46.457 | 381 | 145 | 8 | 103 | 425 | 40 | 419 | 1.82e-115 | 344 |
MsG0380015786.01.T01 | AT5G56530 | 46.457 | 381 | 145 | 8 | 103 | 425 | 40 | 419 | 1.82e-115 | 344 |
MsG0380015786.01.T01 | AT5G18460 | 47.532 | 385 | 143 | 8 | 100 | 425 | 45 | 429 | 1.08e-114 | 343 |
MsG0380015786.01.T01 | AT2G44210 | 44.529 | 393 | 156 | 9 | 95 | 426 | 24 | 415 | 8.66e-111 | 332 |
MsG0380015786.01.T01 | AT2G44210 | 41.928 | 415 | 149 | 9 | 103 | 426 | 32 | 445 | 5.04e-106 | 321 |
MsG0380015786.01.T01 | AT2G44220 | 41.755 | 376 | 162 | 10 | 103 | 426 | 33 | 403 | 2.65e-94 | 290 |
MsG0380015786.01.T01 | AT1G23340 | 51.220 | 287 | 87 | 5 | 57 | 302 | 10 | 284 | 3.95e-90 | 275 |
MsG0380015786.01.T01 | AT2G17750 | 39.740 | 385 | 171 | 12 | 95 | 425 | 18 | 395 | 1.43e-86 | 270 |
MsG0380015786.01.T01 | AT2G44240 | 41.176 | 374 | 166 | 10 | 103 | 426 | 33 | 402 | 1.70e-86 | 270 |
MsG0380015786.01.T01 | AT2G19360 | 38.931 | 393 | 166 | 10 | 105 | 425 | 35 | 425 | 9.15e-80 | 253 |
MsG0380015786.01.T01 | AT3G48230 | 39.607 | 356 | 163 | 8 | 117 | 426 | 24 | 373 | 9.16e-80 | 251 |
MsG0380015786.01.T01 | AT1G70550 | 64.516 | 186 | 60 | 2 | 90 | 270 | 88 | 272 | 2.96e-78 | 244 |
MsG0380015786.01.T01 | AT2G44250 | 41.114 | 377 | 162 | 10 | 104 | 425 | 37 | 408 | 2.15e-77 | 246 |
MsG0380015786.01.T01 | AT1G10750 | 59.314 | 204 | 72 | 3 | 90 | 283 | 90 | 292 | 2.72e-77 | 244 |
MsG0380015786.01.T01 | AT5G19170 | 37.363 | 364 | 172 | 8 | 102 | 420 | 13 | 365 | 1.05e-72 | 233 |
MsG0380015786.01.T01 | AT2G44250 | 40.446 | 314 | 139 | 7 | 158 | 425 | 14 | 325 | 1.24e-61 | 202 |
MsG0380015786.01.T01 | AT5G25950 | 33.744 | 406 | 193 | 10 | 90 | 426 | 34 | 432 | 2.37e-57 | 194 |
MsG0380015786.01.T01 | AT2G20170 | 32.316 | 393 | 213 | 13 | 60 | 420 | 8 | 379 | 2.58e-49 | 172 |
MsG0380015786.01.T01 | AT2G20170 | 30.637 | 408 | 217 | 13 | 60 | 420 | 8 | 396 | 2.64e-47 | 167 |
MsG0380015786.01.T01 | AT2G20170 | 30.637 | 408 | 217 | 13 | 60 | 420 | 8 | 396 | 2.64e-47 | 167 |
MsG0380015786.01.T01 | AT5G25960 | 30.469 | 384 | 179 | 9 | 90 | 426 | 15 | 357 | 1.82e-43 | 156 |
MsG0380015786.01.T01 | AT4G23360 | 30.376 | 372 | 194 | 13 | 104 | 420 | 38 | 399 | 1.32e-40 | 149 |
MsG0380015786.01.T01 | AT4G23390 | 30.318 | 409 | 218 | 16 | 61 | 420 | 7 | 397 | 5.34e-40 | 147 |
MsG0380015786.01.T01 | AT4G23365 | 29.268 | 369 | 199 | 12 | 105 | 420 | 39 | 398 | 5.22e-39 | 145 |
MsG0380015786.01.T01 | AT4G23370 | 30.376 | 372 | 197 | 14 | 105 | 420 | 36 | 401 | 1.33e-38 | 144 |
MsG0380015786.01.T01 | AT4G23355 | 30.163 | 368 | 199 | 15 | 104 | 420 | 38 | 398 | 7.41e-38 | 142 |
MsG0380015786.01.T01 | AT4G23350 | 29.459 | 370 | 201 | 16 | 104 | 420 | 38 | 400 | 1.89e-36 | 138 |
MsG0380015786.01.T01 | AT4G23380 | 28.150 | 373 | 199 | 14 | 104 | 420 | 39 | 398 | 4.85e-33 | 129 |
MsG0380015786.01.T01 | AT4G15050 | 27.513 | 378 | 195 | 16 | 103 | 420 | 36 | 394 | 9.02e-28 | 114 |
MsG0380015786.01.T01 | AT1G10190 | 28.533 | 375 | 195 | 16 | 103 | 420 | 36 | 394 | 2.03e-27 | 113 |
MsG0380015786.01.T01 | AT4G10220 | 26.442 | 416 | 231 | 17 | 54 | 420 | 9 | 398 | 9.29e-27 | 111 |
MsG0380015786.01.T01 | AT2G35250 | 27.635 | 351 | 188 | 10 | 112 | 422 | 15 | 339 | 3.77e-25 | 105 |
MsG0380015786.01.T01 | AT4G15053 | 26.933 | 375 | 204 | 14 | 103 | 420 | 40 | 401 | 4.50e-25 | 106 |
MsG0380015786.01.T01 | AT4G23373 | 28.000 | 325 | 159 | 15 | 109 | 420 | 40 | 302 | 7.32e-24 | 101 |
MsG0380015786.01.T01 | AT2G24950 | 26.016 | 369 | 209 | 14 | 103 | 420 | 54 | 409 | 2.90e-23 | 101 |
MsG0380015786.01.T01 | AT5G46820 | 24.581 | 358 | 203 | 13 | 112 | 420 | 8 | 347 | 2.15e-20 | 92.4 |
MsG0380015786.01.T01 | AT5G46810 | 24.022 | 358 | 211 | 12 | 113 | 420 | 3 | 349 | 1.80e-18 | 86.7 |
MsG0380015786.01.T01 | AT4G10210 | 25.124 | 402 | 231 | 17 | 54 | 407 | 9 | 388 | 6.18e-18 | 85.5 |
MsG0380015786.01.T01 | AT4G17505 | 24.927 | 341 | 179 | 13 | 119 | 426 | 25 | 321 | 6.45e-18 | 84.7 |
MsG0380015786.01.T01 | AT5G60380 | 24.138 | 348 | 198 | 14 | 124 | 425 | 44 | 371 | 4.82e-16 | 79.7 |
MsG0380015786.01.T01 | AT4G23080 | 24.178 | 426 | 240 | 20 | 53 | 422 | 8 | 406 | 5.48e-15 | 76.6 |
MsG0380015786.01.T01 | AT5G25410 | 25.519 | 337 | 194 | 13 | 124 | 420 | 44 | 363 | 1.56e-14 | 75.1 |
MsG0380015786.01.T01 | AT5G37520 | 30.864 | 162 | 94 | 7 | 268 | 421 | 47 | 198 | 5.99e-14 | 70.9 |
Find 102 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGTATCCCTTTGGCCTTTC+TGG | 0.032761 | 3:+75012948 | None:intergenic |
TTTGATCATCCTAAGCTTAA+AGG | 0.172683 | 3:-75013093 | MsG0380015786.01.T01:CDS |
GATTGTGAATGCTCGTTCTA+AGG | 0.242059 | 3:-75010606 | MsG0380015786.01.T01:CDS |
TAAATCCTTCTTCTGCAAAA+TGG | 0.251332 | 3:+75010552 | None:intergenic |
TTGCTATCTTGTTGTTAGTT+TGG | 0.257816 | 3:+75011585 | None:intergenic |
GAATCTCTCCGTACAGGTTT+TGG | 0.268183 | 3:+75012783 | None:intergenic |
TTTCAGCTGTGGACTGATTC+TGG | 0.270068 | 3:-75012897 | MsG0380015786.01.T01:CDS |
AGCAGGGTAATAACAATGTT+TGG | 0.280005 | 3:-75010421 | MsG0380015786.01.T01:CDS |
AACCGTGGACAGTTTGATAT+TGG | 0.280369 | 3:-75011530 | MsG0380015786.01.T01:CDS |
AGCCAGCAATAACCCATATC+TGG | 0.287768 | 3:+75012115 | None:intergenic |
AATTTAGCTTGTCCCAGATA+TGG | 0.289493 | 3:-75012128 | MsG0380015786.01.T01:CDS |
TGGGTTATTGCTGGCTCCTT+TGG | 0.293081 | 3:-75012108 | MsG0380015786.01.T01:CDS |
GCAAGTTCTATCAAAAGATT+TGG | 0.293382 | 3:-75012813 | MsG0380015786.01.T01:CDS |
CTATAATAAAATAATTAAAT+TGG | 0.294632 | 3:+75010335 | None:intergenic |
TCTTCTGTTGTTCTTCTGAT+TGG | 0.306036 | 3:+75012849 | None:intergenic |
GCAGGGTAATAACAATGTTT+GGG | 0.312146 | 3:-75010420 | MsG0380015786.01.T01:CDS |
ACTAACAACAAGATAGCAAT+AGG | 0.320394 | 3:-75011581 | MsG0380015786.01.T01:CDS |
CTGCTTAATGTTATAACAAT+TGG | 0.320834 | 3:+75010439 | None:intergenic |
ATTGGTGCCATTTATCTTCA+TGG | 0.325038 | 3:+75010353 | None:intergenic |
GAAACTTACAAGTCATTGAT+TGG | 0.334217 | 3:-75010511 | MsG0380015786.01.T01:CDS |
TTGATATTGGCATAATGATT+TGG | 0.339854 | 3:-75011517 | MsG0380015786.01.T01:CDS |
GGGCATTTCACATTTCTTCC+AGG | 0.340470 | 3:+75010374 | None:intergenic |
CAAACATGTTTAGTCACTTA+AGG | 0.351583 | 3:-75010661 | MsG0380015786.01.T01:CDS |
TTGATCATCCTAAGCTTAAA+GGG | 0.352738 | 3:-75013092 | MsG0380015786.01.T01:CDS |
TCCCAGATATGGGTTATTGC+TGG | 0.354056 | 3:-75012117 | MsG0380015786.01.T01:CDS |
CTGATTGGAACAGTTCCTTC+TGG | 0.362002 | 3:+75012864 | None:intergenic |
ATAAGTCTGGTTAGTCTTCA+AGG | 0.365189 | 3:+75013502 | None:intergenic |
GAAATGCCCATGAAGATAAA+TGG | 0.369174 | 3:-75010360 | MsG0380015786.01.T01:exon |
GTAAATGGAAATCAATACTT+TGG | 0.375350 | 3:-75012201 | MsG0380015786.01.T01:CDS |
GAGGATTATTAGTTGGATAC+TGG | 0.382244 | 3:-75010688 | MsG0380015786.01.T01:CDS |
CTGAACCTGCTTTATAAGTC+TGG | 0.386950 | 3:+75013489 | None:intergenic |
CATGCAAGCATGGTACAATT+TGG | 0.389315 | 3:-75010635 | MsG0380015786.01.T01:CDS |
CCATTGTTGTAGTATCCCTT+TGG | 0.394843 | 3:+75012939 | None:intergenic |
AACCACCAGTGTCCATGCTT+TGG | 0.397011 | 3:+75010719 | None:intergenic |
GTGTGGTGTGCTACACAATA+TGG | 0.403466 | 3:+75013710 | None:intergenic |
GGTTTATGCCCTTTAAGCTT+AGG | 0.407567 | 3:+75013084 | None:intergenic |
CCACACATTTATGTTTGCCT+TGG | 0.423813 | 3:+75012176 | None:intergenic |
AAGTGACTAAACATGTTTGC+TGG | 0.424031 | 3:+75010665 | None:intergenic |
ATTTAGCTTGTCCCAGATAT+GGG | 0.425371 | 3:-75012127 | MsG0380015786.01.T01:CDS |
TCTTGCTAATATTCATCACT+TGG | 0.440337 | 3:-75010471 | MsG0380015786.01.T01:CDS |
GAGTACGGAGGATTATTAGT+TGG | 0.443449 | 3:-75010695 | MsG0380015786.01.T01:CDS |
CAATCTATCAAATCACCATC+TGG | 0.451064 | 3:+75013141 | None:intergenic |
GGCATTTCACATTTCTTCCA+GGG | 0.458404 | 3:+75010375 | None:intergenic |
CACGGTTATAAGCTGATGTA+GGG | 0.467774 | 3:+75011546 | None:intergenic |
CTAACAACAAGATAGCAATA+GGG | 0.470151 | 3:-75011580 | MsG0380015786.01.T01:CDS |
AAACTTACAAGTCATTGATT+GGG | 0.470160 | 3:-75010510 | MsG0380015786.01.T01:CDS |
CAATTGTTATAACATTAAGC+AGG | 0.472121 | 3:-75010438 | MsG0380015786.01.T01:CDS |
TTACCACACCGACACTCAAA+TGG | 0.474382 | 3:-75010582 | MsG0380015786.01.T01:CDS |
TATCCCTTTGGCCTTTCTGG+TGG | 0.482974 | 3:+75012951 | None:intergenic |
ATACTACAACAATGGAGAAA+AGG | 0.486967 | 3:-75012931 | MsG0380015786.01.T01:CDS |
TTGGTGCCATTTATCTTCAT+GGG | 0.489912 | 3:+75010354 | None:intergenic |
CCAAAGGGATACTACAACAA+TGG | 0.490175 | 3:-75012939 | MsG0380015786.01.T01:CDS |
AGCTTAGGATGATCAAAAGC+TGG | 0.492216 | 3:+75013099 | None:intergenic |
TAAGTCTGGTTAGTCTTCAA+GGG | 0.494109 | 3:+75013503 | None:intergenic |
CCACGGTTATAAGCTGATGT+AGG | 0.497933 | 3:+75011545 | None:intergenic |
CTAATTGAATCTCTCCGTAC+AGG | 0.512104 | 3:+75012777 | None:intergenic |
AAGTGGACAATATGAGAGAA+TGG | 0.513503 | 3:+75013642 | None:intergenic |
ATTGTGAATGCTCGTTCTAA+GGG | 0.526045 | 3:-75010605 | MsG0380015786.01.T01:CDS |
GCCACTTCCCATTTGAGTGT+CGG | 0.531546 | 3:+75010574 | None:intergenic |
GATCTGAATACTCTAGAAGC+TGG | 0.535306 | 3:-75012081 | MsG0380015786.01.T01:intron |
GCTTAAAGGGCATAAACCAC+TGG | 0.535463 | 3:-75013079 | MsG0380015786.01.T01:intron |
TAGAATTAGAATGGAAGCAA+AGG | 0.536775 | 3:-75013768 | None:intergenic |
CAGTTTCCTTGAAAAGACAT+AGG | 0.537425 | 3:-75013739 | MsG0380015786.01.T01:CDS |
GTGGCTAGAATCTGAGACAA+TGG | 0.543283 | 3:+75013526 | None:intergenic |
CTTAAGGAGTCATGCAAGCA+TGG | 0.548826 | 3:-75010645 | MsG0380015786.01.T01:CDS |
GCCAGCAATAACCCATATCT+GGG | 0.550061 | 3:+75012116 | None:intergenic |
GCAAGCATGGTACAATTTGG+TGG | 0.552322 | 3:-75010632 | MsG0380015786.01.T01:CDS |
TACCACACCGACACTCAAAT+GGG | 0.555983 | 3:-75010581 | MsG0380015786.01.T01:CDS |
GTTCTATCAAAAGATTTGGA+AGG | 0.566425 | 3:-75012809 | MsG0380015786.01.T01:CDS |
TTCAATTAGCAGTGATCATG+AGG | 0.571226 | 3:-75012763 | MsG0380015786.01.T01:intron |
AATTGTTATAACATTAAGCA+GGG | 0.572505 | 3:-75010437 | MsG0380015786.01.T01:CDS |
TATTGGCATAATGATTTGGA+AGG | 0.580599 | 3:-75011513 | MsG0380015786.01.T01:intron |
AAATCAATACTTTGGAGCCA+AGG | 0.583744 | 3:-75012193 | MsG0380015786.01.T01:CDS |
GATCCACCAGAAAGGCCAAA+GGG | 0.583977 | 3:-75012954 | MsG0380015786.01.T01:CDS |
ACCGACACTCAAATGGGAAG+TGG | 0.587290 | 3:-75010575 | MsG0380015786.01.T01:CDS |
GGACACTGGTGGTTAGAGTA+CGG | 0.591126 | 3:-75010710 | MsG0380015786.01.T01:CDS |
AAGTGATGAATATTAGCAAG+AGG | 0.592167 | 3:+75010473 | None:intergenic |
GAAGGAAACCAAAACCTGTA+CGG | 0.593940 | 3:-75012791 | MsG0380015786.01.T01:CDS |
TAACAACAAGATAGCAATAG+GGG | 0.596202 | 3:-75011579 | MsG0380015786.01.T01:CDS |
TGCCAATATCAAACTGTCCA+CGG | 0.597797 | 3:+75011528 | None:intergenic |
ACTTTGTATCAGAGTCCAGA+TGG | 0.600213 | 3:-75013156 | MsG0380015786.01.T01:intron |
CCAAGGCAAACATAAATGTG+TGG | 0.602971 | 3:-75012176 | MsG0380015786.01.T01:CDS |
GTTTACAGGATCCACCAGAA+AGG | 0.603971 | 3:-75012962 | MsG0380015786.01.T01:intron |
ACTAACCAGACTTATAAAGC+AGG | 0.607754 | 3:-75013494 | MsG0380015786.01.T01:CDS |
TGTGAACAGGATCCAAAGCA+TGG | 0.614621 | 3:-75010731 | MsG0380015786.01.T01:intron |
CAAGGCAAACATAAATGTGT+GGG | 0.616077 | 3:-75012175 | MsG0380015786.01.T01:CDS |
TTCCCATTTGAGTGTCGGTG+TGG | 0.620291 | 3:+75010579 | None:intergenic |
TTAATGAGAAGTTTCAGCTG+TGG | 0.623212 | 3:-75012908 | MsG0380015786.01.T01:CDS |
AAGTCTGGTTAGTCTTCAAG+GGG | 0.632401 | 3:+75013504 | None:intergenic |
TCATATCCATCTGTTACATG+AGG | 0.644566 | 3:+75012150 | None:intergenic |
CAGGGTAATAACAATGTTTG+GGG | 0.644781 | 3:-75010419 | MsG0380015786.01.T01:CDS |
TCTGGTTAGTCTTCAAGGGG+TGG | 0.644987 | 3:+75013507 | None:intergenic |
TGATGAGAGTGAGACAATGC+TGG | 0.646817 | 3:+75013551 | None:intergenic |
AGTATTCAGATCATTACCAA+AGG | 0.647857 | 3:+75012092 | None:intergenic |
AGGATCCAAAGCATGGACAC+TGG | 0.649017 | 3:-75010724 | MsG0380015786.01.T01:CDS |
TCTGGTGAAGAATGTCCAGA+AGG | 0.650833 | 3:-75012879 | MsG0380015786.01.T01:CDS |
GGATCCACCAGAAAGGCCAA+AGG | 0.651755 | 3:-75012955 | MsG0380015786.01.T01:CDS |
TGGGCACCTCATGTAACAGA+TGG | 0.656951 | 3:-75012156 | MsG0380015786.01.T01:CDS |
ATCCAAAGCATGGACACTGG+TGG | 0.664040 | 3:-75010721 | MsG0380015786.01.T01:CDS |
ACGGTTATAAGCTGATGTAG+GGG | 0.689573 | 3:+75011547 | None:intergenic |
CCTACATCAGCTTATAACCG+TGG | 0.701785 | 3:-75011545 | MsG0380015786.01.T01:CDS |
CACTGGTGGTTAGAGTACGG+AGG | 0.713683 | 3:-75010707 | MsG0380015786.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTTTTTGATATTGAATTTTA+AGG | + | Chr3:75011354-75011373 | None:intergenic | 15.0% |
!! | AAAAGTAGTAAGATTAATCA+TGG | + | Chr3:75013185-75013204 | None:intergenic | 20.0% |
!! | AACAATAAACAAACAAAAAC+AGG | + | Chr3:75010492-75010511 | None:intergenic | 20.0% |
!! | AATTAGAAAAAGAAACATCA+TGG | + | Chr3:75013024-75013043 | None:intergenic | 20.0% |
!! | AATTGTTATAACATTAAGCA+GGG | - | Chr3:75013648-75013667 | MsG0380015786.01.T01:CDS | 20.0% |
!! | ATTGGAAATATGTGTTAAAA+AGG | + | Chr3:75013119-75013138 | None:intergenic | 20.0% |
!! | CCATACAAAATTTATAAATC+AGG | - | Chr3:75011052-75011071 | MsG0380015786.01.T01:intron | 20.0% |
!! | GTTAATTATGTTGTAAACTA+TGG | - | Chr3:75011487-75011506 | MsG0380015786.01.T01:intron | 20.0% |
!! | TTAAATATTAGTACAATGCA+AGG | - | Chr3:75013315-75013334 | MsG0380015786.01.T01:intron | 20.0% |
!!! | AATTTTGCTATGAAATTGAA+AGG | + | Chr3:75012717-75012736 | None:intergenic | 20.0% |
!!! | CCTGATTTATAAATTTTGTA+TGG | + | Chr3:75011055-75011074 | None:intergenic | 20.0% |
!!! | CTAATTTTTCTTTCATCAAT+AGG | - | Chr3:75011577-75011596 | MsG0380015786.01.T01:CDS | 20.0% |
!!! | GATAAATTTTGACAACAATT+TGG | - | Chr3:75011436-75011455 | MsG0380015786.01.T01:intron | 20.0% |
!!! | GATTTTCCTAAAATGTATTT+TGG | - | Chr3:75013223-75013242 | MsG0380015786.01.T01:intron | 20.0% |
!!! | TAAAATAGTGGTTTTATGAT+TGG | + | Chr3:75013137-75013156 | None:intergenic | 20.0% |
! | AAAAGAAACATCATGGTTAT+TGG | + | Chr3:75013017-75013036 | None:intergenic | 25.0% |
! | AAATAAAGTAAACTCCACTA+AGG | + | Chr3:75012895-75012914 | None:intergenic | 25.0% |
! | AAATTGTGCATTCATTTATG+AGG | - | Chr3:75011542-75011561 | MsG0380015786.01.T01:CDS | 25.0% |
! | AACAACGCAATTCAAATATA+TGG | - | Chr3:75011465-75011484 | MsG0380015786.01.T01:intron | 25.0% |
! | ACTCAATTCAACAATAATCA+AGG | - | Chr3:75012612-75012631 | MsG0380015786.01.T01:intron | 25.0% |
! | CAATTGTTATAACATTAAGC+AGG | - | Chr3:75013647-75013666 | MsG0380015786.01.T01:CDS | 25.0% |
! | CTGCTTAATGTTATAACAAT+TGG | + | Chr3:75013649-75013668 | None:intergenic | 25.0% |
! | GGTTAATTGTCTTAAAATAG+TGG | + | Chr3:75013149-75013168 | None:intergenic | 25.0% |
! | GTAAATGGAAATCAATACTT+TGG | - | Chr3:75011884-75011903 | MsG0380015786.01.T01:intron | 25.0% |
! | GTTATTGAAATTATTACCAG+TGG | + | Chr3:75011025-75011044 | None:intergenic | 25.0% |
! | TCAACATTCTTTGTAACTAT+TGG | + | Chr3:75013058-75013077 | None:intergenic | 25.0% |
! | TCCAGCAAAAACTAAAAAAA+TGG | - | Chr3:75011795-75011814 | MsG0380015786.01.T01:intron | 25.0% |
! | TGCATACTAGTGATAATTTA+GGG | + | Chr3:75012061-75012080 | None:intergenic | 25.0% |
! | TTAAGATCAATTACGACTAA+TGG | - | Chr3:75012138-75012157 | MsG0380015786.01.T01:CDS | 25.0% |
! | TTATTAAATGAAGCATGAAG+TGG | + | Chr3:75012090-75012109 | None:intergenic | 25.0% |
! | TTGATATTGGCATAATGATT+TGG | - | Chr3:75012568-75012587 | MsG0380015786.01.T01:intron | 25.0% |
! | TTGCATACTAGTGATAATTT+AGG | + | Chr3:75012062-75012081 | None:intergenic | 25.0% |
!! | AAACTTACAAGTCATTGATT+GGG | - | Chr3:75013575-75013594 | MsG0380015786.01.T01:CDS | 25.0% |
!! | ATTAAGTTGTTTATCGAAAC+AGG | + | Chr3:75012165-75012184 | None:intergenic | 25.0% |
!! | CATGCAATTCTTTTTGTAAA+TGG | - | Chr3:75011869-75011888 | MsG0380015786.01.T01:intron | 25.0% |
!! | CATTGACCAAAATACATTTT+AGG | + | Chr3:75013232-75013251 | None:intergenic | 25.0% |
!!! | AATTTTGACAACAATTTGGA+TGG | - | Chr3:75011440-75011459 | MsG0380015786.01.T01:intron | 25.0% |
!!! | ATTTCTAGAATCTAGTTAGT+AGG | - | Chr3:75012225-75012244 | MsG0380015786.01.T01:intron | 25.0% |
!!! | GATTAATCTTACTACTTTTG+TGG | - | Chr3:75013186-75013205 | MsG0380015786.01.T01:intron | 25.0% |
!!! | GCTTTAAAAAAGAAACAGTA+AGG | + | Chr3:75012923-75012942 | None:intergenic | 25.0% |
!!! | GGAACTTATTTTTATTATGG+AGG | - | Chr3:75013687-75013706 | MsG0380015786.01.T01:CDS | 25.0% |
!!! | TATGCCTTTGTTGAATTTTT+TGG | - | Chr3:75012862-75012881 | MsG0380015786.01.T01:CDS | 25.0% |
!!! | TCCATTTTTTTAGTTTTTGC+TGG | + | Chr3:75011799-75011818 | None:intergenic | 25.0% |
!!! | TGGGGAACTTATTTTTATTA+TGG | - | Chr3:75013684-75013703 | MsG0380015786.01.T01:CDS | 25.0% |
AAATCAATGCACAAGAAAAG+AGG | + | Chr3:75012401-75012420 | None:intergenic | 30.0% | |
AACTCACAAGGCTTATATAA+TGG | - | Chr3:75012668-75012687 | MsG0380015786.01.T01:intron | 30.0% | |
AAGTCATAAATTACACGAGA+AGG | - | Chr3:75011723-75011742 | MsG0380015786.01.T01:intron | 30.0% | |
AAGTGATGAATATTAGCAAG+AGG | + | Chr3:75013615-75013634 | None:intergenic | 30.0% | |
ACTAACAACAAGATAGCAAT+AGG | - | Chr3:75012504-75012523 | MsG0380015786.01.T01:intron | 30.0% | |
AGTATTCAGATCATTACCAA+AGG | + | Chr3:75011996-75012015 | None:intergenic | 30.0% | |
AGTTACAAAGAATGTTGAAC+AGG | - | Chr3:75013060-75013079 | MsG0380015786.01.T01:intron | 30.0% | |
ATACTACAACAATGGAGAAA+AGG | - | Chr3:75011154-75011173 | MsG0380015786.01.T01:intron | 30.0% | |
ATACTAGTGATAATTTAGGG+AGG | + | Chr3:75012058-75012077 | None:intergenic | 30.0% | |
CAAACATGTTTAGTCACTTA+AGG | - | Chr3:75013424-75013443 | MsG0380015786.01.T01:intron | 30.0% | |
CAAGAAAAGAGGTTGAAATA+AGG | + | Chr3:75012390-75012409 | None:intergenic | 30.0% | |
CTAACAACAAGATAGCAATA+GGG | - | Chr3:75012505-75012524 | MsG0380015786.01.T01:intron | 30.0% | |
CTGGAAAAGTTATACATGTT+TGG | + | Chr3:75011780-75011799 | None:intergenic | 30.0% | |
GAAACTTACAAGTCATTGAT+TGG | - | Chr3:75013574-75013593 | MsG0380015786.01.T01:CDS | 30.0% | |
GCAAGTTCTATCAAAAGATT+TGG | - | Chr3:75011272-75011291 | MsG0380015786.01.T01:intron | 30.0% | |
GTTCTATCAAAAGATTTGGA+AGG | - | Chr3:75011276-75011295 | MsG0380015786.01.T01:intron | 30.0% | |
TAAATCCTTCTTCTGCAAAA+TGG | + | Chr3:75013536-75013555 | None:intergenic | 30.0% | |
TAACAACAAGATAGCAATAG+GGG | - | Chr3:75012506-75012525 | MsG0380015786.01.T01:intron | 30.0% | |
TACTAGTGATAATTTAGGGA+GGG | + | Chr3:75012057-75012076 | None:intergenic | 30.0% | |
TATTCAACTTTGTCATTGAG+TGG | + | Chr3:75013273-75013292 | None:intergenic | 30.0% | |
TCTTGCTAATATTCATCACT+TGG | - | Chr3:75013614-75013633 | MsG0380015786.01.T01:CDS | 30.0% | |
TGTAAGCTATATCTTTCTTC+AGG | - | Chr3:75012269-75012288 | MsG0380015786.01.T01:intron | 30.0% | |
TTACTGACATTGAGTATGTT+TGG | - | Chr3:75010727-75010746 | MsG0380015786.01.T01:intron | 30.0% | |
TTGATCATCCTAAGCTTAAA+GGG | - | Chr3:75010993-75011012 | MsG0380015786.01.T01:intron | 30.0% | |
TTTGATCATCCTAAGCTTAA+AGG | - | Chr3:75010992-75011011 | MsG0380015786.01.T01:intron | 30.0% | |
! | ATTGTTTTCATGAACGATCA+TGG | + | Chr3:75010857-75010876 | None:intergenic | 30.0% |
! | CTTGTACCTACATTGATTAT+TGG | - | Chr3:75011751-75011770 | MsG0380015786.01.T01:intron | 30.0% |
! | TATTGGCATAATGATTTGGA+AGG | - | Chr3:75012572-75012591 | MsG0380015786.01.T01:intron | 30.0% |
! | TTCTTTCCTATGTCTTTTCA+AGG | + | Chr3:75010355-75010374 | None:intergenic | 30.0% |
! | TTCTTTTTGCTTAACTCACA+AGG | - | Chr3:75012656-75012675 | MsG0380015786.01.T01:intron | 30.0% |
!! | TAATCTTACTACTTTTGTGG+TGG | - | Chr3:75013189-75013208 | MsG0380015786.01.T01:intron | 30.0% |
!! | TTGCTATCTTGTTGTTAGTT+TGG | + | Chr3:75012503-75012522 | None:intergenic | 30.0% |
!!! | CAGGCTTATTGATTTTTTTG+AGG | + | Chr3:75010653-75010672 | None:intergenic | 30.0% |
!!! | CTGTTTCTTTTTTAAAGCAG+TGG | - | Chr3:75012925-75012944 | MsG0380015786.01.T01:CDS | 30.0% |
AAGAGACAAACAAACACAAG+TGG | + | Chr3:75011680-75011699 | None:intergenic | 35.0% | |
AAGTGACTAAACATGTTTGC+TGG | + | Chr3:75013423-75013442 | None:intergenic | 35.0% | |
AAGTGGACAATATGAGAGAA+TGG | + | Chr3:75010446-75010465 | None:intergenic | 35.0% | |
AATCATGGCAAATACACTTG+TGG | + | Chr3:75013170-75013189 | None:intergenic | 35.0% | |
AATGTCAGTAACAATGTCAC+TGG | + | Chr3:75010718-75010737 | None:intergenic | 35.0% | |
ACAGATGCATATCAAACAAC+TGG | - | Chr3:75012447-75012466 | MsG0380015786.01.T01:intron | 35.0% | |
ACTAACCAGACTTATAAAGC+AGG | - | Chr3:75010591-75010610 | MsG0380015786.01.T01:CDS | 35.0% | |
ACTAGTGATAATTTAGGGAG+GGG | + | Chr3:75012056-75012075 | None:intergenic | 35.0% | |
AGCAGGGTAATAACAATGTT+TGG | - | Chr3:75013664-75013683 | MsG0380015786.01.T01:CDS | 35.0% | |
ATCCAAGGTTCTTCACTTAT+TGG | - | Chr3:75012319-75012338 | MsG0380015786.01.T01:intron | 35.0% | |
ATTGTGAATGCTCGTTCTAA+GGG | - | Chr3:75013480-75013499 | MsG0380015786.01.T01:CDS | 35.0% | |
CAAACAAAAACAGGTAGCAT+AGG | + | Chr3:75010483-75010502 | None:intergenic | 35.0% | |
CAAGGCAAACATAAATGTGT+GGG | - | Chr3:75011910-75011929 | MsG0380015786.01.T01:intron | 35.0% | |
CAATCTATCAAATCACCATC+TGG | + | Chr3:75010947-75010966 | None:intergenic | 35.0% | |
CAGGGTAATAACAATGTTTG+GGG | - | Chr3:75013666-75013685 | MsG0380015786.01.T01:CDS | 35.0% | |
CAGTTTCCTTGAAAAGACAT+AGG | - | Chr3:75010346-75010365 | MsG0380015786.01.T01:three_prime_UTR | 35.0% | |
GAAATGCCCATGAAGATAAA+TGG | - | Chr3:75013725-75013744 | MsG0380015786.01.T01:CDS | 35.0% | |
GACAGAAAGTAAGAGGATTA+AGG | - | Chr3:75011101-75011120 | MsG0380015786.01.T01:intron | 35.0% | |
GAGGATTATTAGTTGGATAC+TGG | - | Chr3:75013397-75013416 | MsG0380015786.01.T01:intron | 35.0% | |
GCAGGGTAATAACAATGTTT+GGG | - | Chr3:75013665-75013684 | MsG0380015786.01.T01:CDS | 35.0% | |
GCTGAAAAATCATTGTGAAC+AGG | - | Chr3:75013341-75013360 | MsG0380015786.01.T01:intron | 35.0% | |
GTAAGAGGATTAAGGTTTAC+AGG | - | Chr3:75011109-75011128 | MsG0380015786.01.T01:intron | 35.0% | |
TCATATCCATCTGTTACATG+AGG | + | Chr3:75011938-75011957 | None:intergenic | 35.0% | |
TCTTCTGTTGTTCTTCTGAT+TGG | + | Chr3:75011239-75011258 | None:intergenic | 35.0% | |
TGCTACAACTTATTGTGTTC+AGG | - | Chr3:75012471-75012490 | MsG0380015786.01.T01:intron | 35.0% | |
TGGCATCCAATAATCAATGT+AGG | + | Chr3:75011760-75011779 | None:intergenic | 35.0% | |
TTAATGAGAAGTTTCAGCTG+TGG | - | Chr3:75011177-75011196 | MsG0380015786.01.T01:intron | 35.0% | |
TTCAATTAGCAGTGATCATG+AGG | - | Chr3:75011322-75011341 | MsG0380015786.01.T01:intron | 35.0% | |
TTTGAGAGACAGAAAGTAAG+AGG | - | Chr3:75011094-75011113 | MsG0380015786.01.T01:intron | 35.0% | |
! | TGTTCTTTTCTTACTGGCAA+AGG | + | Chr3:75011625-75011644 | None:intergenic | 35.0% |
! | TTCACGCTTAACTTTTATGC+TGG | - | Chr3:75012948-75012967 | MsG0380015786.01.T01:CDS | 35.0% |
!! | AAATCAATACTTTGGAGCCA+AGG | - | Chr3:75011892-75011911 | MsG0380015786.01.T01:intron | 35.0% |
!! | AATTTAGCTTGTCCCAGATA+TGG | - | Chr3:75011957-75011976 | MsG0380015786.01.T01:intron | 35.0% |
!! | ATAAGTCTGGTTAGTCTTCA+AGG | + | Chr3:75010586-75010605 | None:intergenic | 35.0% |
!! | ATTGGTGCCATTTATCTTCA+TGG | + | Chr3:75013735-75013754 | None:intergenic | 35.0% |
!! | ATTTAGCTTGTCCCAGATAT+GGG | - | Chr3:75011958-75011977 | MsG0380015786.01.T01:intron | 35.0% |
!! | TAAGTCTGGTTAGTCTTCAA+GGG | + | Chr3:75010585-75010604 | None:intergenic | 35.0% |
!! | TAGTGCTGTTCTTTTCTTAC+TGG | + | Chr3:75011631-75011650 | None:intergenic | 35.0% |
!! | TATGCTGGTCTTACTGTATA+TGG | - | Chr3:75012963-75012982 | MsG0380015786.01.T01:intron | 35.0% |
!! | TATTTTTATTATGGAGGCCC+TGG | - | Chr3:75013693-75013712 | MsG0380015786.01.T01:CDS | 35.0% |
!! | TTGGTGCCATTTATCTTCAT+GGG | + | Chr3:75013734-75013753 | None:intergenic | 35.0% |
!!! | CCTTTGTTGAATTTTTTGGC+GGG | - | Chr3:75012866-75012885 | MsG0380015786.01.T01:CDS | 35.0% |
!!! | CTTTGTTGAATTTTTTGGCG+GGG | - | Chr3:75012867-75012886 | MsG0380015786.01.T01:CDS | 35.0% |
!!! | GCCTTTGTTGAATTTTTTGG+CGG | - | Chr3:75012865-75012884 | MsG0380015786.01.T01:CDS | 35.0% |
!!! | TATGGTGTTGTCTTTTTGTG+TGG | + | Chr3:75010395-75010414 | None:intergenic | 35.0% |
!!! | TTGTGTACATGCTTGTTTTG+AGG | + | Chr3:75010421-75010440 | None:intergenic | 35.0% |
!!! | TTTGTTGAATTTTTTGGCGG+GGG | - | Chr3:75012868-75012887 | MsG0380015786.01.T01:CDS | 35.0% |
AACCGTGGACAGTTTGATAT+TGG | - | Chr3:75012555-75012574 | MsG0380015786.01.T01:intron | 40.0% | |
ACAAAAACAGGTAGCATAGG+TGG | + | Chr3:75010480-75010499 | None:intergenic | 40.0% | |
ACGGTTATAAGCTGATGTAG+GGG | + | Chr3:75012541-75012560 | None:intergenic | 40.0% | |
ACTACCTTAACAGACAGTGA+AGG | - | Chr3:75011647-75011666 | MsG0380015786.01.T01:intron | 40.0% | |
ACTTTGTATCAGAGTCCAGA+TGG | - | Chr3:75010929-75010948 | MsG0380015786.01.T01:intron | 40.0% | |
AGCTTAGGATGATCAAAAGC+TGG | + | Chr3:75010989-75011008 | None:intergenic | 40.0% | |
CACGGTTATAAGCTGATGTA+GGG | + | Chr3:75012542-75012561 | None:intergenic | 40.0% | |
CATGCAAGCATGGTACAATT+TGG | - | Chr3:75013450-75013469 | MsG0380015786.01.T01:CDS | 40.0% | |
CCAAAGGGATACTACAACAA+TGG | - | Chr3:75011146-75011165 | MsG0380015786.01.T01:intron | 40.0% | |
CCAAGGCAAACATAAATGTG+TGG | - | Chr3:75011909-75011928 | MsG0380015786.01.T01:intron | 40.0% | |
CCACACATTTATGTTTGCCT+TGG | + | Chr3:75011912-75011931 | None:intergenic | 40.0% | |
CCATTGTTGTAGTATCCCTT+TGG | + | Chr3:75011149-75011168 | None:intergenic | 40.0% | |
CCCGCCAAAAAATTCAACAA+AGG | + | Chr3:75012869-75012888 | None:intergenic | 40.0% | |
CTAATTGAATCTCTCCGTAC+AGG | + | Chr3:75011311-75011330 | None:intergenic | 40.0% | |
CTACCTTAACAGACAGTGAA+GGG | - | Chr3:75011648-75011667 | MsG0380015786.01.T01:intron | 40.0% | |
CTGAACCTGCTTTATAAGTC+TGG | + | Chr3:75010599-75010618 | None:intergenic | 40.0% | |
CTTACTGGCAAAGGAAATGT+GGG | + | Chr3:75011616-75011635 | None:intergenic | 40.0% | |
GAAGGAAACCAAAACCTGTA+CGG | - | Chr3:75011294-75011313 | MsG0380015786.01.T01:intron | 40.0% | |
GAGTACGGAGGATTATTAGT+TGG | - | Chr3:75013390-75013409 | MsG0380015786.01.T01:intron | 40.0% | |
GATTGTGAATGCTCGTTCTA+AGG | - | Chr3:75013479-75013498 | MsG0380015786.01.T01:CDS | 40.0% | |
GGCATTTCACATTTCTTCCA+GGG | + | Chr3:75013713-75013732 | None:intergenic | 40.0% | |
GGTTTATGCCCTTTAAGCTT+AGG | + | Chr3:75011004-75011023 | None:intergenic | 40.0% | |
GTCCAATAAGTGAAGAACCT+TGG | + | Chr3:75012324-75012343 | None:intergenic | 40.0% | |
TAGTTGTCACCATACAGTTC+TGG | + | Chr3:75012300-75012319 | None:intergenic | 40.0% | |
TCAATGTGTCTCTACTCTAG+TGG | - | Chr3:75013246-75013265 | MsG0380015786.01.T01:intron | 40.0% | |
TCTTACTGGCAAAGGAAATG+TGG | + | Chr3:75011617-75011636 | None:intergenic | 40.0% | |
TGCCAATATCAAACTGTCCA+CGG | + | Chr3:75012560-75012579 | None:intergenic | 40.0% | |
TGTATGGTGACAACTATCCA+AGG | - | Chr3:75012304-75012323 | MsG0380015786.01.T01:intron | 40.0% | |
TTACTGGCAAAGGAAATGTG+GGG | + | Chr3:75011615-75011634 | None:intergenic | 40.0% | |
! | GATCTGAATACTCTAGAAGC+TGG | - | Chr3:75012004-75012023 | MsG0380015786.01.T01:intron | 40.0% |
! | TAGGGAGGGGAAAAAGTATA+TGG | + | Chr3:75012043-75012062 | None:intergenic | 40.0% |
! | TGAATACTCTAGAAGCTGGT+TGG | - | Chr3:75012008-75012027 | MsG0380015786.01.T01:intron | 40.0% |
!! | AAGTCTGGTTAGTCTTCAAG+GGG | + | Chr3:75010584-75010603 | None:intergenic | 40.0% |
!! | TCTTACTACTTTTGTGGTGG+TGG | - | Chr3:75013192-75013211 | MsG0380015786.01.T01:intron | 40.0% |
!!! | ATGCTTGTTTTGAGGCAGTA+TGG | + | Chr3:75010413-75010432 | None:intergenic | 40.0% |
AGCCAGCAATAACCCATATC+TGG | + | Chr3:75011973-75011992 | None:intergenic | 45.0% | |
CAGGTAAGTCCAGAACTGTA+TGG | - | Chr3:75012288-75012307 | MsG0380015786.01.T01:intron | 45.0% | |
CCACGGTTATAAGCTGATGT+AGG | + | Chr3:75012543-75012562 | None:intergenic | 45.0% | |
CCTACATCAGCTTATAACCG+TGG | - | Chr3:75012540-75012559 | MsG0380015786.01.T01:intron | 45.0% | |
CTGATTGGAACAGTTCCTTC+TGG | + | Chr3:75011224-75011243 | None:intergenic | 45.0% | |
CTTAAGGAGTCATGCAAGCA+TGG | - | Chr3:75013440-75013459 | MsG0380015786.01.T01:CDS | 45.0% | |
GCAAGCATGGTACAATTTGG+TGG | - | Chr3:75013453-75013472 | MsG0380015786.01.T01:CDS | 45.0% | |
GCCAGCAATAACCCATATCT+GGG | + | Chr3:75011972-75011991 | None:intergenic | 45.0% | |
GGGCATTTCACATTTCTTCC+AGG | + | Chr3:75013714-75013733 | None:intergenic | 45.0% | |
GTGTGGTGTGCTACACAATA+TGG | + | Chr3:75010378-75010397 | None:intergenic | 45.0% | |
GTTTACAGGATCCACCAGAA+AGG | - | Chr3:75011123-75011142 | MsG0380015786.01.T01:intron | 45.0% | |
TACCACACCGACACTCAAAT+GGG | - | Chr3:75013504-75013523 | MsG0380015786.01.T01:CDS | 45.0% | |
TCTGGTGAAGAATGTCCAGA+AGG | - | Chr3:75011206-75011225 | MsG0380015786.01.T01:intron | 45.0% | |
TGATGAGAGTGAGACAATGC+TGG | + | Chr3:75010537-75010556 | None:intergenic | 45.0% | |
TGTCCCTTCACTGTCTGTTA+AGG | + | Chr3:75011654-75011673 | None:intergenic | 45.0% | |
TGTGAACAGGATCCAAAGCA+TGG | - | Chr3:75013354-75013373 | MsG0380015786.01.T01:intron | 45.0% | |
TTACCACACCGACACTCAAA+TGG | - | Chr3:75013503-75013522 | MsG0380015786.01.T01:CDS | 45.0% | |
! | GAATCTCTCCGTACAGGTTT+TGG | + | Chr3:75011305-75011324 | None:intergenic | 45.0% |
! | GCTTAAAGGGCATAAACCAC+TGG | - | Chr3:75011006-75011025 | MsG0380015786.01.T01:intron | 45.0% |
! | GTGGCTAGAATCTGAGACAA+TGG | + | Chr3:75010562-75010581 | None:intergenic | 45.0% |
! | TAGTATCCCTTTGGCCTTTC+TGG | + | Chr3:75011140-75011159 | None:intergenic | 45.0% |
! | TCCCAGATATGGGTTATTGC+TGG | - | Chr3:75011968-75011987 | MsG0380015786.01.T01:intron | 45.0% |
! | TTTCAGCTGTGGACTGATTC+TGG | - | Chr3:75011188-75011207 | MsG0380015786.01.T01:intron | 45.0% |
!! | AGTGGCCATTTTGCAGAAGA+AGG | - | Chr3:75013528-75013547 | MsG0380015786.01.T01:CDS | 45.0% |
!!! | ACTACTTTTGTGGTGGTGGT+TGG | - | Chr3:75013196-75013215 | MsG0380015786.01.T01:intron | 45.0% |
!!! | AGGTGGAGTGTTTTGAGAAG+TGG | + | Chr3:75010463-75010482 | None:intergenic | 45.0% |
!! | AAAATATTAAAAATAAACAA+AGG | + | Chr3:75012114-75012133 | None:intergenic | 5.0% |
!! | AATATTAATATAACATAAAA+AGG | + | Chr3:75012819-75012838 | None:intergenic | 5.0% |
!! | CTATAATAAAATAATTAAAT+TGG | + | Chr3:75013753-75013772 | None:intergenic | 5.0% |
!!! | CAATTTAATTATTTTATTAT+AGG | - | Chr3:75013751-75013770 | MsG0380015786.01.T01:CDS | 5.0% |
AACCACCAGTGTCCATGCTT+TGG | + | Chr3:75013369-75013388 | None:intergenic | 50.0% | |
ACCGACACTCAAATGGGAAG+TGG | - | Chr3:75013510-75013529 | MsG0380015786.01.T01:CDS | 50.0% | |
AGGATCCAAAGCATGGACAC+TGG | - | Chr3:75013361-75013380 | MsG0380015786.01.T01:intron | 50.0% | |
ATCCAAAGCATGGACACTGG+TGG | - | Chr3:75013364-75013383 | MsG0380015786.01.T01:intron | 50.0% | |
GATCCACCAGAAAGGCCAAA+GGG | - | Chr3:75011131-75011150 | MsG0380015786.01.T01:intron | 50.0% | |
GCCACTTCCCATTTGAGTGT+CGG | + | Chr3:75013514-75013533 | None:intergenic | 50.0% | |
GCCTGAATTGTCTTCACAGC+AGG | + | Chr3:75010672-75010691 | None:intergenic | 50.0% | |
GCCTGCTGTGAAGACAATTC+AGG | - | Chr3:75010668-75010687 | MsG0380015786.01.T01:CDS | 50.0% | |
GGACACTGGTGGTTAGAGTA+CGG | - | Chr3:75013375-75013394 | MsG0380015786.01.T01:intron | 50.0% | |
TGGGCACCTCATGTAACAGA+TGG | - | Chr3:75011929-75011948 | MsG0380015786.01.T01:intron | 50.0% | |
! | TACTCTAGAAGCTGGTTGGC+AGG | - | Chr3:75012012-75012031 | MsG0380015786.01.T01:intron | 50.0% |
! | TATCCCTTTGGCCTTTCTGG+TGG | + | Chr3:75011137-75011156 | None:intergenic | 50.0% |
!! | TCTGGTTAGTCTTCAAGGGG+TGG | + | Chr3:75010581-75010600 | None:intergenic | 50.0% |
!! | TGGGTTATTGCTGGCTCCTT+TGG | - | Chr3:75011977-75011996 | MsG0380015786.01.T01:intron | 50.0% |
!! | TTCCCATTTGAGTGTCGGTG+TGG | + | Chr3:75013509-75013528 | None:intergenic | 50.0% |
!!! | TTTTGTGGTGGTGGTTGGTG+TGG | - | Chr3:75013201-75013220 | MsG0380015786.01.T01:intron | 50.0% |
CACTGGTGGTTAGAGTACGG+AGG | - | Chr3:75013378-75013397 | MsG0380015786.01.T01:intron | 55.0% | |
GGATCCACCAGAAAGGCCAA+AGG | - | Chr3:75011130-75011149 | MsG0380015786.01.T01:intron | 55.0% | |
!! | TTTTTGGCGGGGGACCTTAG+TGG | - | Chr3:75012878-75012897 | MsG0380015786.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 75010327 | 75013780 | 75010327 | ID=MsG0380015786.01;Name=MsG0380015786.01 |
Chr3 | mRNA | 75010327 | 75013780 | 75010327 | ID=MsG0380015786.01.T01;Parent=MsG0380015786.01;Name=MsG0380015786.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0.6|0.33|1|1|1|6|43|426 |
Chr3 | exon | 75010327 | 75010744 | 75010327 | ID=MsG0380015786.01.T01:exon:981;Parent=MsG0380015786.01.T01 |
Chr3 | exon | 75011514 | 75011614 | 75011514 | ID=MsG0380015786.01.T01:exon:980;Parent=MsG0380015786.01.T01 |
Chr3 | exon | 75012082 | 75012238 | 75012082 | ID=MsG0380015786.01.T01:exon:979;Parent=MsG0380015786.01.T01 |
Chr3 | exon | 75012764 | 75012976 | 75012764 | ID=MsG0380015786.01.T01:exon:978;Parent=MsG0380015786.01.T01 |
Chr3 | exon | 75013080 | 75013166 | 75013080 | ID=MsG0380015786.01.T01:exon:977;Parent=MsG0380015786.01.T01 |
Chr3 | exon | 75013433 | 75013780 | 75013433 | ID=MsG0380015786.01.T01:exon:976;Parent=MsG0380015786.01.T01 |
Chr3 | CDS | 75013433 | 75013780 | 75013433 | ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01 |
Chr3 | CDS | 75013080 | 75013166 | 75013080 | ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01 |
Chr3 | CDS | 75012764 | 75012976 | 75012764 | ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01 |
Chr3 | CDS | 75012082 | 75012238 | 75012082 | ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01 |
Chr3 | CDS | 75011514 | 75011614 | 75011514 | ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01 |
Chr3 | CDS | 75010370 | 75010744 | 75010370 | ID=MsG0380015786.01.T01:cds;Parent=MsG0380015786.01.T01 |
Chr3 | three_prime_UTR | 75010327 | 75010369 | 75010327 | ID=MsG0380015786.01.T01:three_prime_utr;Parent=MsG0380015786.01.T01 |
Gene Sequence |
Protein sequence |