AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000402.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000402.01.T01 MTR_1g016570 86.523 371 28 1 1 371 17 365 0.0 649
MsG0180000402.01.T01 MTR_3g030080 56.364 385 134 9 2 367 4 373 7.97e-131 386
MsG0180000402.01.T01 MTR_2g047180 56.883 385 129 13 5 370 4 370 5.01e-128 379
MsG0180000402.01.T01 MTR_3g029650 50.515 388 145 9 1 367 1 362 2.80e-106 335
MsG0180000402.01.T01 MTR_3g029650 44.697 396 178 12 1 367 368 751 3.93e-83 274
MsG0180000402.01.T01 MTR_3g030480 49.737 380 149 11 1 365 1 353 1.72e-102 312
MsG0180000402.01.T01 MTR_3g030380 49.737 380 156 9 1 367 1 358 3.25e-102 312
MsG0180000402.01.T01 MTR_6g018360 48.329 389 168 9 1 365 1 380 6.41e-102 313
MsG0180000402.01.T01 MTR_3g030440 49.077 379 151 11 2 365 3 354 5.09e-101 309
MsG0180000402.01.T01 MTR_3g029670 47.132 401 164 11 1 367 1 387 9.81e-99 304
MsG0180000402.01.T01 MTR_3g030360 48.462 390 140 10 1 367 1 352 2.32e-98 302
MsG0180000402.01.T01 MTR_6g018390 49.610 385 154 13 1 365 1 365 7.48e-98 301
MsG0180000402.01.T01 MTR_6g018315 48.549 379 152 12 16 365 1 365 8.32e-98 302
MsG0180000402.01.T01 MTR_3g029750 44.389 401 175 11 1 367 1 387 4.18e-92 287
MsG0180000402.01.T01 MTR_3g092000 44.656 421 166 13 2 373 4 406 3.40e-91 285
MsG0180000402.01.T01 MTR_1g049170 45.000 400 161 12 4 365 5 383 6.17e-91 284
MsG0180000402.01.T01 MTR_1g007260 45.932 381 171 13 1 361 18 383 4.35e-90 282
MsG0180000402.01.T01 MTR_6g018400 47.436 390 158 15 1 365 1 368 1.00e-89 280
MsG0180000402.01.T01 MTR_6g027100 45.823 395 164 12 1 365 1 375 1.20e-88 280
MsG0180000402.01.T01 MTR_3g091990 44.665 403 177 12 1 371 3 391 7.54e-88 277
MsG0180000402.01.T01 MTR_6g027040 45.316 395 166 12 1 365 1 375 1.66e-87 275
MsG0180000402.01.T01 MTR_3g029920 44.975 398 162 14 3 367 7 380 1.26e-86 273
MsG0180000402.01.T01 MTR_1g026850 45.479 376 176 12 3 365 4 363 5.86e-85 268
MsG0180000402.01.T01 MTR_3g029840 46.547 391 150 16 1 367 1 356 3.15e-83 263
MsG0180000402.01.T01 MTR_1g016540 69.519 187 51 4 188 371 1 184 6.39e-82 253
MsG0180000402.01.T01 MTR_3g030355 42.336 411 174 15 2 367 3 395 1.81e-80 257
MsG0180000402.01.T01 MTR_3g029950 44.975 398 158 17 1 367 1 368 6.81e-78 249
MsG0180000402.01.T01 MTR_3g030050 38.095 420 188 11 4 365 15 420 2.11e-76 247
MsG0180000402.01.T01 MTR_3g029620 43.257 393 178 16 4 369 2 376 3.65e-75 243
MsG0180000402.01.T01 MTR_3g029640 43.223 391 163 16 4 365 3 363 2.17e-74 240
MsG0180000402.01.T01 MTR_3g030560 44.246 391 170 16 3 365 2 372 1.26e-73 239
MsG0180000402.01.T01 MTR_3g058460 39.687 383 195 12 1 365 11 375 3.97e-68 224
MsG0180000402.01.T01 MTR_3g029870 41.582 392 147 15 1 367 1 335 1.02e-67 222
MsG0180000402.01.T01 MTR_3g029800 40.360 389 169 15 4 365 3 355 2.95e-64 214
MsG0180000402.01.T01 MTR_3g029900 45.741 317 131 12 61 365 170 457 2.97e-63 215
MsG0180000402.01.T01 MTR_3g047980 42.216 379 152 16 5 365 30 359 3.62e-57 195
MsG0180000402.01.T01 MTR_7g005990 38.776 392 174 16 3 365 2 356 6.46e-56 191
MsG0180000402.01.T01 MTR_6g018370 41.009 317 113 8 3 304 2 259 3.48e-55 186
MsG0180000402.01.T01 MTR_3g029820 40.000 390 137 15 5 367 9 328 5.74e-54 186
MsG0180000402.01.T01 MTR_7g033205 86.869 99 13 0 373 471 65 163 2.43e-51 173
MsG0180000402.01.T01 MTR_3g037710 38.408 289 141 9 103 373 1 270 6.30e-49 170
MsG0180000402.01.T01 MTR_5g042230 51.913 183 81 3 173 354 12 188 1.49e-46 162
MsG0180000402.01.T01 MTR_2g061390 77.551 98 21 1 373 469 74 171 1.75e-44 155
MsG0180000402.01.T01 MTR_8g051775 47.938 194 43 4 326 493 86 247 2.76e-42 152
MsG0180000402.01.T01 MTR_8g027132 64.062 128 39 2 373 497 25 148 2.45e-41 145
MsG0180000402.01.T01 MTR_1g007250 52.047 171 71 4 188 358 1 160 5.33e-41 145
MsG0180000402.01.T01 MTR_1g007220 43.627 204 76 3 156 358 2 167 5.65e-40 143
MsG0180000402.01.T01 MTR_2g039980 70.755 106 28 1 355 457 31 136 1.61e-38 138
MsG0180000402.01.T01 MTR_8g074610 28.426 394 226 11 5 365 25 395 2.35e-37 142
MsG0180000402.01.T01 MTR_5g078450 52.817 142 45 1 231 372 5 124 3.28e-37 134
MsG0180000402.01.T01 MTR_3g030100 67.778 90 26 1 357 443 1 90 1.79e-35 128
MsG0180000402.01.T01 MTR_2g041510 30.833 360 176 12 5 320 6 336 1.72e-30 122
MsG0180000402.01.T01 MTR_2g041510 30.833 360 176 12 5 320 26 356 2.36e-30 122
MsG0180000402.01.T01 MTR_8g074640 30.189 371 208 12 5 341 6 359 2.31e-29 119
MsG0180000402.01.T01 MTR_5g064800 58.491 106 16 1 374 479 296 373 1.77e-27 114
MsG0180000402.01.T01 MTR_4g022880 43.478 138 70 2 237 368 39 174 1.27e-25 104
MsG0180000402.01.T01 MTR_4g028260 45.802 131 64 3 314 444 35 158 6.78e-25 101
MsG0180000402.01.T01 MTR_0524s0030 81.034 58 11 0 410 467 51 108 1.87e-23 95.5
MsG0180000402.01.T01 MTR_6g092570 28.571 357 208 14 5 338 8 340 4.11e-23 101
MsG0180000402.01.T01 MTR_1g007200 50.000 104 39 3 249 350 1 93 2.66e-21 90.1
MsG0180000402.01.T01 MTR_5g079830 25.595 336 206 10 5 318 6 319 2.91e-19 90.5
MsG0180000402.01.T01 MTR_8g032080 48.980 98 43 3 117 208 4 100 1.17e-18 87.4
MsG0180000402.01.T01 MTR_4g098825 58.824 85 9 1 373 457 49 107 1.55e-18 81.6
MsG0180000402.01.T01 MTR_8g035995 46.078 102 42 2 197 295 1 92 1.88e-16 77.0
MsG0180000402.01.T01 MTR_6g009100 41.912 136 49 5 4 129 3 118 2.70e-16 75.5
MsG0180000402.01.T01 MTR_1g007230 48.810 84 34 3 3 78 6 88 1.34e-15 72.4
MsG0180000402.01.T01 MTR_1g016510 94.444 36 2 0 498 533 20 55 4.21e-14 74.3
MsG0180000402.01.T01 MTR_6g009620 43.617 94 39 5 83 167 38 126 4.76e-14 69.3
MsG0180000402.01.T01 MTR_3g114990 23.873 377 240 14 5 348 23 385 3.34e-13 72.0
MsG0180000402.01.T01 MTR_8g085540 62.500 48 18 0 390 437 3 50 7.05e-13 64.3
MsG0180000402.01.T01 MTR_6g018420 72.973 37 10 0 1 37 1 37 1.06e-12 64.3
MsG0180000402.01.T01 MTR_6g075925 69.767 43 13 0 1 43 1 43 1.61e-12 63.9
MsG0180000402.01.T01 MTR_4g088925 24.309 362 193 13 16 332 37 362 7.56e-12 67.4
MsG0180000402.01.T01 MTR_4g028280 68.421 38 12 0 400 437 1 38 2.17e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000402.01.T01 AT2G17030 35.516 397 211 13 5 365 3 390 5.11e-54 188
MsG0180000402.01.T01 AT2G17036 30.788 406 212 15 5 365 3 384 5.05e-41 152
MsG0180000402.01.T01 AT2G17036 30.788 406 212 15 5 365 2 383 5.37e-41 152
MsG0180000402.01.T01 AT5G24040 27.105 380 243 18 6 365 4 369 1.95e-23 102
MsG0180000402.01.T01 AT5G60060 27.733 375 237 16 4 355 9 372 3.52e-21 95.9
MsG0180000402.01.T01 AT3G25750 27.297 381 220 16 1 361 1 344 1.12e-20 94.0
MsG0180000402.01.T01 AT3G25750 25.974 385 234 15 1 361 1 358 7.17e-20 91.7
MsG0180000402.01.T01 AT1G65770 27.246 345 200 11 4 320 2 323 6.80e-18 85.9
MsG0180000402.01.T01 AT2G26160 24.128 344 213 12 1 320 1 320 3.81e-14 74.3
MsG0180000402.01.T01 AT1G65740 24.930 357 203 13 5 320 3 335 5.35e-11 65.1

Find 124 sgRNAs with CRISPR-Local

Find 673 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGAGATTGTATTAGTTTA+AGG 0.095523 1:+5556781 MsG0180000402.01.T01:CDS
GAACTTTATGTACTTGAATT+AGG 0.191945 1:+5549405 MsG0180000402.01.T01:CDS
ACATCAGATATCGGCAAAAT+TGG 0.199555 1:-5556453 None:intergenic
TTGATGAGAAGGAGAGTAAA+TGG 0.206024 1:+5549868 MsG0180000402.01.T01:CDS
AAACCAACGGAGATGAATTT+TGG 0.212262 1:+5549568 MsG0180000402.01.T01:CDS
TCTTATCACCTATCCTGATT+TGG 0.248488 1:+5560527 MsG0180000402.01.T01:CDS
ATGGGTTGATTTGATGAGTT+TGG 0.251492 1:+5549887 MsG0180000402.01.T01:CDS
TTAACCACAAGTTCATATTT+AGG 0.261634 1:-5549726 None:intergenic
CTTATCACCTATCCTGATTT+GGG 0.262260 1:+5560528 MsG0180000402.01.T01:CDS
ATTTGATGAGTTTGGGAGAT+AGG 0.289011 1:+5549895 MsG0180000402.01.T01:CDS
TCTGTCTCTGTTGCTGTGTA+TGG 0.298337 1:+5560486 MsG0180000402.01.T01:CDS
GAGGAGTGGGTGTAAGAGTT+TGG 0.312170 1:-5549331 None:intergenic
AAATATGAACTTGTGGTTAA+TGG 0.323243 1:+5549729 MsG0180000402.01.T01:CDS
GTGGACATTTATGAGTGTTT+AGG 0.334870 1:+5549798 MsG0180000402.01.T01:CDS
CCAATTCCATCAATCATATA+AGG 0.345857 1:-5549648 None:intergenic
CGGACAATTATTGTTGGACT+TGG 0.356140 1:+5549672 MsG0180000402.01.T01:CDS
TTCACCTTTGTCTGATTGTC+CGG 0.356602 1:+5550079 MsG0180000402.01.T01:CDS
AGCTTATAGAAACCACTAAA+AGG 0.363858 1:-5556489 None:intergenic
TGCCGATATCTGATGTTCAT+TGG 0.367138 1:+5556460 MsG0180000402.01.T01:CDS
GTTGTTGATGGGAGATTGAT+AGG 0.367917 1:-5549205 None:intergenic
TGGAAACTTGAGGGTTAGAT+TGG 0.369886 1:-5549178 None:intergenic
ATCAGATGTAGAAGCTCCTT+TGG 0.370393 1:-5549072 None:intergenic
TTTCAACGAGACTGATTTCT+TGG 0.370571 1:-5549547 None:intergenic
GCAAGATAACATACTCTGTT+AGG 0.372490 1:-5550155 None:intergenic
CTGTCTCTGTTGCTGTGTAT+GGG 0.372972 1:+5560487 MsG0180000402.01.T01:CDS
CAGATTTGTGTGTTTCTAAA+GGG 0.375553 1:+5549961 MsG0180000402.01.T01:CDS
TCGAGATTGTATTAGTTTAA+GGG 0.377004 1:+5556782 MsG0180000402.01.T01:CDS
TTACAATTTAAACCCAAATC+AGG 0.381571 1:-5560540 None:intergenic
CAGAACAAGTTAAAATATTC+CGG 0.384086 1:-5550098 None:intergenic
TTGAGGGTTAGATTGGGAAT+TGG 0.401176 1:-5549171 None:intergenic
GCTTCTGCAACCTCTGAATC+TGG 0.402356 1:-5556624 None:intergenic
CCTTATATGATTGATGGAAT+TGG 0.407615 1:+5549648 MsG0180000402.01.T01:CDS
GATGAGGAAGAAAGAGCGTT+TGG 0.413225 1:-5549250 None:intergenic
TCAGATTTGTGTGTTTCTAA+AGG 0.427259 1:+5549960 MsG0180000402.01.T01:CDS
TACTGATATGTCTATGTACT+TGG 0.428125 1:+5549599 MsG0180000402.01.T01:CDS
CGAGTTCAACGTCGAGTCGT+TGG 0.433682 1:-5549098 None:intergenic
TCAGGGTAAACATAGTCATA+TGG 0.438455 1:-5549462 None:intergenic
TTGTTGATGGGAGATTGATA+GGG 0.442668 1:-5549204 None:intergenic
GAGTTCAACGTCGAGTCGTT+GGG 0.443077 1:-5549097 None:intergenic
TGATGAGAAGGAGAGTAAAT+GGG 0.446912 1:+5549869 MsG0180000402.01.T01:CDS
TGTATCTTTGACTTGGATCA+AGG 0.447583 1:+5550050 MsG0180000402.01.T01:CDS
GGGCGGCCTTATATGATTGA+TGG 0.452306 1:+5549642 MsG0180000402.01.T01:CDS
AACCACCACTTCAACGCCCT+TGG 0.454393 1:+5549274 MsG0180000402.01.T01:CDS
GAGGGTGATAAGTGGGGTAT+TGG 0.456385 1:+5556537 MsG0180000402.01.T01:CDS
TGGGTTGATTTGATGAGTTT+GGG 0.459847 1:+5549888 MsG0180000402.01.T01:CDS
GGTTAGATTGGGAATTGGTA+AGG 0.460418 1:-5549166 None:intergenic
TGTGTTTAGGTTTGATGAGA+AGG 0.463451 1:+5549857 MsG0180000402.01.T01:CDS
GTCCAATGAACATCAGATAT+CGG 0.463487 1:-5556462 None:intergenic
AAATTGAGTGGTGTTGTTGA+TGG 0.466840 1:-5549217 None:intergenic
CATCAGATATCGGCAAAATT+GGG 0.469166 1:-5556452 None:intergenic
CAACATAGTTGAGAGATTGT+TGG 0.472896 1:-5556749 None:intergenic
TTTGATGAGTTTGGGAGATA+GGG 0.474756 1:+5549896 MsG0180000402.01.T01:CDS
GATCGCATGACTTCGATGAC+TGG 0.480649 1:+5549694 MsG0180000402.01.T01:CDS
ATAGGGGTGTGGAAACTTGA+GGG 0.481501 1:-5549187 None:intergenic
TTGTCGTTGGTGCTAGTTGT+TGG 0.481658 1:+5556586 MsG0180000402.01.T01:CDS
ATTGGTCGGACAATTATTGT+TGG 0.482444 1:+5549666 MsG0180000402.01.T01:CDS
TCAGATGTAGAAGCTCCTTT+GGG 0.486819 1:-5549071 None:intergenic
TAAGAGTGCTAGTAAGGTGT+TGG 0.493238 1:+5556410 MsG0180000402.01.T01:CDS
CATCAATGGCAGAGTCAGAC+TGG 0.493551 1:+5549040 None:intergenic
TGTTGCTGTGTATGGGGACC+AGG 0.494219 1:+5560494 MsG0180000402.01.T01:CDS
TGATAAGAGCTGGTTTGTCC+TGG 0.497015 1:-5560512 None:intergenic
GAGTGCTAGTAAGGTGTTGG+TGG 0.497303 1:+5556413 MsG0180000402.01.T01:CDS
ACACCAAAATTCATCTCCGT+TGG 0.512605 1:-5549571 None:intergenic
TCCGATCAACTTGTTCCGCA+TGG 0.522258 1:+5549133 MsG0180000402.01.T01:CDS
GAAGCTTTAGCTATGCGAAA+GGG 0.522399 1:+5556642 MsG0180000402.01.T01:CDS
TGGGAACTGTATCTTTGACT+TGG 0.526556 1:+5550043 MsG0180000402.01.T01:CDS
TCCGATAGAGGGTGATAAGT+GGG 0.535216 1:+5556530 MsG0180000402.01.T01:CDS
TGACGCAGCGGATCCGATAG+AGG 0.537128 1:+5556518 MsG0180000402.01.T01:CDS
AACCAAGGGCGTTGAAGTGG+TGG 0.538102 1:-5549276 None:intergenic
ATGGGAGATTGATAGGGGTG+TGG 0.538525 1:-5549198 None:intergenic
TATGAACTTGTGGTTAATGG+TGG 0.543129 1:+5549732 MsG0180000402.01.T01:CDS
GATAGGGGTGTGGAAACTTG+AGG 0.545526 1:-5549188 None:intergenic
CAACAATCTCTCAACTATGT+TGG 0.546039 1:+5556750 MsG0180000402.01.T01:CDS
AATTGAGTGGTGTTGTTGAT+GGG 0.546505 1:-5549216 None:intergenic
TGTCTCTGTTGCTGTGTATG+GGG 0.548337 1:+5560488 MsG0180000402.01.T01:CDS
TGAGGGGACTGATGTTGATG+TGG 0.550235 1:+5556347 MsG0180000402.01.T01:intron
TCAGGATAGGTGATAAGAGC+TGG 0.553536 1:-5560522 None:intergenic
GGAAACTTGAGGGTTAGATT+GGG 0.553565 1:-5549177 None:intergenic
TGAGGGCGCGTTGCTGCGAG+TGG 0.554191 1:+5549779 MsG0180000402.01.T01:CDS
ATCAACCAAGGGCGTTGAAG+TGG 0.559025 1:-5549279 None:intergenic
ATGTTCATTACCAGATTCAG+AGG 0.559607 1:+5556614 MsG0180000402.01.T01:CDS
TGAACTTGTGGTTAATGGTG+GGG 0.569319 1:+5549734 MsG0180000402.01.T01:CDS
GTTGTTGTGAGAGATTATGA+AGG 0.577920 1:+5556561 MsG0180000402.01.T01:CDS
CCCCACTTATCACCCTCTAT+CGG 0.578172 1:-5556531 None:intergenic
TGTTGATGGGAGATTGATAG+GGG 0.579514 1:-5549203 None:intergenic
GAACTTGTGGTTAATGGTGG+GGG 0.582058 1:+5549735 MsG0180000402.01.T01:CDS
ATCCGATAGAGGGTGATAAG+TGG 0.583128 1:+5556529 MsG0180000402.01.T01:CDS
ATGAACTTGTGGTTAATGGT+GGG 0.584883 1:+5549733 MsG0180000402.01.T01:CDS
ATTTAAACCCAAATCAGGAT+AGG 0.588603 1:-5560535 None:intergenic
GAGTAATTCTGATCAACCAA+GGG 0.589964 1:-5549290 None:intergenic
GTTGAAGTGGTGGTTTGATG+AGG 0.590656 1:-5549266 None:intergenic
ATGATTGATACGAGAGGAGT+GGG 0.590980 1:-5549344 None:intergenic
TTGTCGATCCACTCTGTAGG+TGG 0.596783 1:-5550122 None:intergenic
ACCACCTAAATATGAACTTG+TGG 0.597935 1:+5549722 MsG0180000402.01.T01:CDS
AGACTGGTCTTCACTCCCAA+AGG 0.598232 1:+5549056 MsG0180000402.01.T01:CDS
TCACTAAAATCGAGAGCGTG+AGG 0.598776 1:-5549384 None:intergenic
AGAGCGTGAGGGAAAAGAAG+AGG 0.600055 1:-5549372 None:intergenic
GATTATGAAGGTGTTGTCGT+TGG 0.600184 1:+5556573 MsG0180000402.01.T01:CDS
ACTGATATGTCTATGTACTT+GGG 0.602971 1:+5549600 MsG0180000402.01.T01:CDS
AGAAGCTTTAGCTATGCGAA+AGG 0.604475 1:+5556641 MsG0180000402.01.T01:CDS
ACCACAAGTTCATATTTAGG+TGG 0.605610 1:-5549723 None:intergenic
CATATTATCAGAACATGTCA+TGG 0.611620 1:+5560462 MsG0180000402.01.T01:CDS
TGAGTAATTCTGATCAACCA+AGG 0.612564 1:-5549291 None:intergenic
AAAATTCTTAGTGGAGAGTG+AGG 0.612751 1:+5549761 MsG0180000402.01.T01:CDS
CACTAAAATCGAGAGCGTGA+GGG 0.616468 1:-5549383 None:intergenic
CATTTGTCGATCCACTCTGT+AGG 0.617177 1:-5550125 None:intergenic
GATGAGATGATTGATACGAG+AGG 0.619882 1:-5549350 None:intergenic
TCAGTCTCGTTGAAAACCAA+CGG 0.621836 1:+5549555 MsG0180000402.01.T01:CDS
GCCATGCGGAACAAGTTGAT+CGG 0.628441 1:-5549134 None:intergenic
GGAGAGAGAGTGAAATTGAG+TGG 0.633283 1:-5549229 None:intergenic
ATATGATTGATGGAATTGGT+CGG 0.636318 1:+5549652 MsG0180000402.01.T01:CDS
GACGCAGCGGATCCGATAGA+GGG 0.636654 1:+5556519 MsG0180000402.01.T01:CDS
ATAAACGTGCCAATAACAAG+AGG 0.645995 1:-5549519 None:intergenic
AAATTCTTAGTGGAGAGTGA+GGG 0.668174 1:+5549762 MsG0180000402.01.T01:CDS
TTATAGAAACCACTAAAAGG+AGG 0.671013 1:-5556486 None:intergenic
TAAGCTTAATGTTGACGCAG+CGG 0.673559 1:+5556506 MsG0180000402.01.T01:CDS
GTGTTGGTGGAGACACTAAG+TGG 0.673748 1:+5556426 MsG0180000402.01.T01:CDS
CCGATAGAGGGTGATAAGTG+GGG 0.674560 1:+5556531 MsG0180000402.01.T01:CDS
AGAATTACTCAAAACCCTAA+CGG 0.674771 1:+5549303 MsG0180000402.01.T01:CDS
TATTCCGGACAATCAGACAA+AGG 0.675553 1:-5550083 None:intergenic
TGTTCTGGCCACCTACAGAG+TGG 0.683477 1:+5550114 MsG0180000402.01.T01:CDS
GATGATTGATACGAGAGGAG+TGG 0.702452 1:-5549345 None:intergenic
TTGGTGGAGACACTAAGTGG+AGG 0.717734 1:+5556429 MsG0180000402.01.T01:CDS
TAAGGAAGAAGAGCGCCATG+CGG 0.759001 1:-5549148 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATATTTATTTTTTA+TGG + Chr1:5552907-5552926 MsG0180000402.01.T01:intron 0.0%
!!! TTAATATTTTTTTTTTAATA+AGG + Chr1:5558162-5558181 MsG0180000402.01.T01:intron 0.0%
!! AAAATAATTTCCATTTAAAA+TGG + Chr1:5560000-5560019 MsG0180000402.01.T01:intron 10.0%
!! ATTATAAAAATTAAAGAAGA+AGG + Chr1:5558518-5558537 MsG0180000402.01.T01:intron 10.0%
!! TATTTGTTCATTTATTTATT+TGG + Chr1:5559227-5559246 MsG0180000402.01.T01:intron 10.0%
!! TTAAGCATTTATAAATAAAA+AGG - Chr1:5555666-5555685 None:intergenic 10.0%
!! TTATAAAAATTAAAGAAGAA+GGG + Chr1:5558519-5558538 MsG0180000402.01.T01:intron 10.0%
!! TTTGAAAAGTTATATATAAA+CGG + Chr1:5550485-5550504 MsG0180000402.01.T01:intron 10.0%
!!! AAAAAGTTTAAGATATAATT+CGG - Chr1:5556199-5556218 None:intergenic 10.0%
!!! AAATACATATATTTTTTTAG+AGG + Chr1:5557939-5557958 MsG0180000402.01.T01:intron 10.0%
!!! ATATTAATTTAAATGTTTTG+AGG + Chr1:5556329-5556348 MsG0180000402.01.T01:intron 10.0%
!!! ATTTAAGATCAATTTTTTTA+TGG + Chr1:5556255-5556274 MsG0180000402.01.T01:intron 10.0%
!!! ATTTTTTTTTATCACAAATA+GGG + Chr1:5558089-5558108 MsG0180000402.01.T01:intron 10.0%
!!! TAAAATTTTATTTGCTAAAA+AGG + Chr1:5559830-5559849 MsG0180000402.01.T01:intron 10.0%
!!! TATTAATTTAAATGTTTTGA+GGG + Chr1:5556330-5556349 MsG0180000402.01.T01:intron 10.0%
!!! TATTTTTTTTTATCACAAAT+AGG + Chr1:5558088-5558107 MsG0180000402.01.T01:intron 10.0%
!!! TTTAAGATCAATTTTTTTAT+GGG + Chr1:5556256-5556275 MsG0180000402.01.T01:intron 10.0%
!!! TTTTTAATACAATTTTCATT+GGG - Chr1:5555346-5555365 None:intergenic 10.0%
!!! TTTTTTATAGTATTCATTAT+AGG + Chr1:5554532-5554551 MsG0180000402.01.T01:intron 10.0%
!! AAAAAATCTATAGTTAAAGA+CGG + Chr1:5554964-5554983 MsG0180000402.01.T01:intron 15.0%
!! AAAAAGATTATATGATAAGA+TGG - Chr1:5557281-5557300 None:intergenic 15.0%
!! AAAAATACAAAAATAACAGA+AGG - Chr1:5552519-5552538 None:intergenic 15.0%
!! AAAAGTAAATTGAAATATCT+TGG + Chr1:5554771-5554790 MsG0180000402.01.T01:intron 15.0%
!! AAAATACAAAAATAACAGAA+GGG - Chr1:5552518-5552537 None:intergenic 15.0%
!! AAAATTCTATCAAAAGAAAA+AGG - Chr1:5557040-5557059 None:intergenic 15.0%
!! AAAATTGTAAGATATATGAA+AGG + Chr1:5554920-5554939 MsG0180000402.01.T01:intron 15.0%
!! AAACAAAAATGATTTAAATC+AGG - Chr1:5555456-5555475 None:intergenic 15.0%
!! AAACCTAAAAAAATTAATTG+TGG - Chr1:5557510-5557529 None:intergenic 15.0%
!! AAATATACACATATTAAAAC+TGG - Chr1:5558662-5558681 None:intergenic 15.0%
!! AAATTCTATCAAAAGAAAAA+GGG - Chr1:5557039-5557058 None:intergenic 15.0%
!! AAATTGTAAGATATATGAAA+GGG + Chr1:5554921-5554940 MsG0180000402.01.T01:intron 15.0%
!! AATTAGCTAAGTAATATATT+TGG - Chr1:5550403-5550422 None:intergenic 15.0%
!! AGTTATGATAATAACATATA+AGG - Chr1:5557652-5557671 None:intergenic 15.0%
!! ATATCACTTTCAATTAAAAT+TGG - Chr1:5555541-5555560 None:intergenic 15.0%
!! ATGAAAATTGTATTAAAAAC+AGG + Chr1:5555347-5555366 MsG0180000402.01.T01:intron 15.0%
!! ATTCATGATTCAATTATAAT+AGG - Chr1:5552648-5552667 None:intergenic 15.0%
!! CAAACTAAATAAATCATAAT+AGG - Chr1:5554162-5554181 None:intergenic 15.0%
!! CAATCTAAATATAAAATAAG+AGG + Chr1:5551307-5551326 MsG0180000402.01.T01:intron 15.0%
!! GAAAATATAATTGGAATATT+TGG + Chr1:5552617-5552636 MsG0180000402.01.T01:intron 15.0%
!! GTTAAATATATGAAGTATAA+AGG - Chr1:5557359-5557378 None:intergenic 15.0%
!! TATAAAAATTAAAGAAGAAG+GGG + Chr1:5558520-5558539 MsG0180000402.01.T01:intron 15.0%
!! TATTATACGTAAACTATATA+CGG - Chr1:5554378-5554397 None:intergenic 15.0%
!! TTACACTAATGTATTAAATT+CGG + Chr1:5558281-5558300 MsG0180000402.01.T01:intron 15.0%
!!! AAAATTGATCTTAAATTTTG+CGG - Chr1:5556251-5556270 None:intergenic 15.0%
!!! AAAATTTTCGACATAATTTA+TGG - Chr1:5555978-5555997 None:intergenic 15.0%
!!! AAATGGAAATTATTTTACTT+AGG - Chr1:5559996-5560015 None:intergenic 15.0%
!!! AATAATCTCATTTTTAAGTT+CGG - Chr1:5550882-5550901 None:intergenic 15.0%
!!! AATAGAAAGCATATATTAAT+AGG + Chr1:5557723-5557742 MsG0180000402.01.T01:intron 15.0%
!!! ACTATACATATCATATTTTT+TGG + Chr1:5557971-5557990 MsG0180000402.01.T01:intron 15.0%
!!! AGAAAATAGAATAACTATTT+TGG - Chr1:5552781-5552800 None:intergenic 15.0%
!!! ATAAAATGTTTTAGAACTTT+AGG - Chr1:5558495-5558514 None:intergenic 15.0%
!!! ATTAATTTAAATGTTTTGAG+GGG + Chr1:5556331-5556350 MsG0180000402.01.T01:intron 15.0%
!!! ATTGTTATTCATATTGAATT+TGG + Chr1:5554453-5554472 MsG0180000402.01.T01:intron 15.0%
!!! GTAATTTAAACATCTTTTAA+GGG + Chr1:5553701-5553720 MsG0180000402.01.T01:intron 15.0%
!!! GTTTTTAATACAATTTTCAT+TGG - Chr1:5555347-5555366 None:intergenic 15.0%
!!! TAACCACAATTAATTTTTTT+AGG + Chr1:5557504-5557523 MsG0180000402.01.T01:intron 15.0%
!!! TAATTTTTTGATGTCTTATA+TGG - Chr1:5552327-5552346 None:intergenic 15.0%
!!! TACATTTTGTTGATTTTTAA+CGG + Chr1:5559420-5559439 MsG0180000402.01.T01:intron 15.0%
!!! TAGCAAATAAAATTTTACTA+GGG - Chr1:5559827-5559846 None:intergenic 15.0%
!!! TATCTATAGATTTTGAAATA+AGG + Chr1:5553797-5553816 MsG0180000402.01.T01:intron 15.0%
!!! TGTAATTTAAACATCTTTTA+AGG + Chr1:5553700-5553719 MsG0180000402.01.T01:intron 15.0%
!!! TTAGCAAATAAAATTTTACT+AGG - Chr1:5559828-5559847 None:intergenic 15.0%
!!! TTCTTTGTATAAAACATTTT+AGG - Chr1:5560823-5560842 None:intergenic 15.0%
!!! TTTTAGGTTTTTAATTACAA+TGG + Chr1:5557391-5557410 MsG0180000402.01.T01:intron 15.0%
!! AAAAAGATAGAAAAATGTGT+CGG + Chr1:5558701-5558720 MsG0180000402.01.T01:intron 20.0%
!! AAACCTAAAAAAATTCATTG+TGG - Chr1:5557381-5557400 None:intergenic 20.0%
!! AAATAACATGCCAAAAAAAT+AGG - Chr1:5550928-5550947 None:intergenic 20.0%
!! AAATACAAAAATAACAGAAG+GGG - Chr1:5552517-5552536 None:intergenic 20.0%
!! AATAACATGCCAAAAAAATA+GGG - Chr1:5550927-5550946 None:intergenic 20.0%
!! AATCAAATGTGAATTAATGT+CGG - Chr1:5558548-5558567 None:intergenic 20.0%
!! AATTGTAAAAACATGCAATA+TGG + Chr1:5550023-5550042 MsG0180000402.01.T01:CDS 20.0%
!! ACAATATGCAAAGAAAATTT+AGG - Chr1:5553540-5553559 None:intergenic 20.0%
!! AGAAAAGAAATACTTTAATG+AGG - Chr1:5560781-5560800 None:intergenic 20.0%
!! AGAAGAAAAAGGATAATAAA+TGG - Chr1:5550787-5550806 None:intergenic 20.0%
!! AGAATGTTTGTATATAAGTT+GGG - Chr1:5551280-5551299 None:intergenic 20.0%
!! ATAAAAATTAAAGAAGAAGG+GGG + Chr1:5558521-5558540 MsG0180000402.01.T01:intron 20.0%
!! ATAGTATCTCAAATTTATGT+TGG - Chr1:5560290-5560309 None:intergenic 20.0%
!! ATATAATTGGAATATTTGGA+TGG + Chr1:5552621-5552640 MsG0180000402.01.T01:intron 20.0%
!! ATATATAAACGGTTAAGATT+TGG + Chr1:5550496-5550515 MsG0180000402.01.T01:intron 20.0%
!! ATATATACAAATGAAGATGA+AGG - Chr1:5551721-5551740 None:intergenic 20.0%
!! ATATTACTTAGCTAATTGTT+AGG + Chr1:5550406-5550425 MsG0180000402.01.T01:intron 20.0%
!! ATCAAAATAGTTTAAGAAAC+TGG + Chr1:5550982-5551001 MsG0180000402.01.T01:intron 20.0%
!! ATGGTTTATTTCAATGTATT+TGG + Chr1:5557539-5557558 MsG0180000402.01.T01:intron 20.0%
!! ATTATACGTAAACTATATAC+GGG - Chr1:5554377-5554396 None:intergenic 20.0%
!! ATTGTAAAAACATGCAATAT+GGG + Chr1:5550024-5550043 MsG0180000402.01.T01:CDS 20.0%
!! CAATTAAAAGAGTAAATTAG+AGG + Chr1:5550631-5550650 MsG0180000402.01.T01:intron 20.0%
!! CTAAATAAATCATAATAGGT+TGG - Chr1:5554158-5554177 None:intergenic 20.0%
!! CTGAGATTTCATTATTAAAT+GGG + Chr1:5552862-5552881 MsG0180000402.01.T01:intron 20.0%
!! CTTACTTAATTAGTGAAATT+AGG - Chr1:5558589-5558608 None:intergenic 20.0%
!! GTTAAATAAACCATAGTATA+AGG + Chr1:5558755-5558774 MsG0180000402.01.T01:intron 20.0%
!! GTTTATTTAACCATATACTT+GGG - Chr1:5558746-5558765 None:intergenic 20.0%
!! TAACAATATGTTCAAAGATT+TGG + Chr1:5551445-5551464 MsG0180000402.01.T01:intron 20.0%
!! TAAGAATTTAGATTGCATAT+GGG + Chr1:5556883-5556902 MsG0180000402.01.T01:intron 20.0%
!! TACACTAATGTATTAAATTC+GGG + Chr1:5558282-5558301 MsG0180000402.01.T01:intron 20.0%
!! TAGAATGTTTGTATATAAGT+TGG - Chr1:5551281-5551300 None:intergenic 20.0%
!! TATAATCAAACCAATAATTC+AGG - Chr1:5555492-5555511 None:intergenic 20.0%
!! TCTCATTTATTAAGATTATG+TGG - Chr1:5557331-5557350 None:intergenic 20.0%
!! TGTTAGGAATCTTAAATATT+TGG + Chr1:5550422-5550441 MsG0180000402.01.T01:intron 20.0%
!! TTAAGAATTTAGATTGCATA+TGG + Chr1:5556882-5556901 MsG0180000402.01.T01:intron 20.0%
!!! AAAAATAATGGAAAAAGTCA+AGG - Chr1:5560596-5560615 None:intergenic 20.0%
!!! AAAATAATGGAAAAAGTCAA+GGG - Chr1:5560595-5560614 None:intergenic 20.0%
!!! AAAGATTTGTTACTTTATAC+AGG + Chr1:5551900-5551919 MsG0180000402.01.T01:intron 20.0%
!!! AAGATTTGTTACTTTATACA+GGG + Chr1:5551901-5551920 MsG0180000402.01.T01:intron 20.0%
!!! AAGTAACAAATCTTTTTGTT+AGG - Chr1:5551895-5551914 None:intergenic 20.0%
!!! AATAGTTTCGTTTTTTGTTT+TGG + Chr1:5557770-5557789 MsG0180000402.01.T01:intron 20.0%
!!! AATGAAAACTTGATGTTTTA+GGG + Chr1:5558223-5558242 MsG0180000402.01.T01:intron 20.0%
!!! AGTCTAATTTTTTCTTTTCA+TGG + Chr1:5560923-5560942 MsG0180000402.01.T01:intron 20.0%
!!! ATAAAATTTTACTAGGGTAT+AGG - Chr1:5559821-5559840 None:intergenic 20.0%
!!! ATAATCTCATTTTTAAGTTC+GGG - Chr1:5550881-5550900 None:intergenic 20.0%
!!! ATAGTTTCGTTTTTTGTTTT+GGG + Chr1:5557771-5557790 MsG0180000402.01.T01:intron 20.0%
!!! CTTTTAATTGTTGATTTGTT+GGG - Chr1:5550621-5550640 None:intergenic 20.0%
!!! GATAATAAATGGCTTTTTAA+TGG - Chr1:5550776-5550795 None:intergenic 20.0%
!!! GTTTAAATTTTTTGCATGTT+AGG + Chr1:5556816-5556835 MsG0180000402.01.T01:intron 20.0%
!!! TAAAATTTTACTAGGGTATA+GGG - Chr1:5559820-5559839 None:intergenic 20.0%
!!! TAACCACAATGAATTTTTTT+AGG + Chr1:5557375-5557394 MsG0180000402.01.T01:intron 20.0%
!!! TAGATTTTCTTTGAGTTTTT+GGG - Chr1:5555727-5555746 None:intergenic 20.0%
!!! TCATTTTTGTTTTTATTGCA+TGG + Chr1:5555464-5555483 MsG0180000402.01.T01:intron 20.0%
!!! TCTGAGATTTCATTATTAAA+TGG + Chr1:5552861-5552880 MsG0180000402.01.T01:intron 20.0%
!!! TCTTTTAATTGTTGATTTGT+TGG - Chr1:5550622-5550641 None:intergenic 20.0%
!!! TGGTTTTATTTCAATGTATT+TGG + Chr1:5557411-5557430 MsG0180000402.01.T01:intron 20.0%
!!! TTTTAAGGATTAATGTGTTT+AGG + Chr1:5549844-5549863 MsG0180000402.01.T01:CDS 20.0%
! AAAACGAAACTATTCTATTC+TGG - Chr1:5557764-5557783 None:intergenic 25.0%
! AAAATGTGCAGAAATGATTT+AGG + Chr1:5560162-5560181 MsG0180000402.01.T01:intron 25.0%
! AAAGGTTTAATCTCATTGTT+GGG - Chr1:5557470-5557489 None:intergenic 25.0%
! AAATATGAACTTGTGGTTAA+TGG + Chr1:5549729-5549748 MsG0180000402.01.T01:CDS 25.0%
! AAATATGAGATTCCTTACAA+CGG - Chr1:5557207-5557226 None:intergenic 25.0%
! AAATGTGAACACTATTGAAA+TGG - Chr1:5555817-5555836 None:intergenic 25.0%
! AAATGTGCAGAAATGATTTA+GGG + Chr1:5560163-5560182 MsG0180000402.01.T01:intron 25.0%
! AACCTCTAATGCTTTAATTA+TGG - Chr1:5551218-5551237 None:intergenic 25.0%
! AAGATTATCTAATCTGACAA+CGG - Chr1:5550198-5550217 None:intergenic 25.0%
! AAGGAAGCCAAAAAAAAAAT+CGG - Chr1:5560217-5560236 None:intergenic 25.0%
! AATTGAATCATGAATGATGT+CGG + Chr1:5552653-5552672 MsG0180000402.01.T01:intron 25.0%
! ACACAATCGTAATAATAACT+AGG - Chr1:5550287-5550306 None:intergenic 25.0%
! ACATTCAAATCATGTACTAT+CGG + Chr1:5555920-5555939 MsG0180000402.01.T01:intron 25.0%
! AGAAAAACAGAGAAATAAAG+AGG - Chr1:5552010-5552029 None:intergenic 25.0%
! AGTTATATTTGAGTATACAC+CGG + Chr1:5551102-5551121 MsG0180000402.01.T01:intron 25.0%
! ATAACATGCCAAAAAAATAG+GGG - Chr1:5550926-5550945 None:intergenic 25.0%
! ATATCTACTCCAATTTCATA+AGG - Chr1:5555019-5555038 None:intergenic 25.0%
! ATGTCTCAAATTCTGTTTAT+GGG + Chr1:5552717-5552736 MsG0180000402.01.T01:intron 25.0%
! ATTAAGATTATGTGGTAAGA+TGG - Chr1:5557323-5557342 None:intergenic 25.0%
! ATTAAGATTCTTGTACTATG+TGG - Chr1:5555180-5555199 None:intergenic 25.0%
! ATTATAGAAAAATGATGTGG+TGG - Chr1:5550753-5550772 None:intergenic 25.0%
! ATTTCAATAGTGTTCACATT+TGG + Chr1:5555816-5555835 MsG0180000402.01.T01:intron 25.0%
! CAACTCTAAATAACTAACTA+CGG - Chr1:5553086-5553105 None:intergenic 25.0%
! CAGAACAAGTTAAAATATTC+CGG - Chr1:5550101-5550120 None:intergenic 25.0%
! CTTTGTAATAGATAATAGTG+TGG + Chr1:5559599-5559618 MsG0180000402.01.T01:intron 25.0%
! GAAAAACAGAGAAATAAAGA+GGG - Chr1:5552009-5552028 None:intergenic 25.0%
! GAACTTTATGTACTTGAATT+AGG + Chr1:5549405-5549424 MsG0180000402.01.T01:CDS 25.0%
! GAATGTTTGTATATAAGTTG+GGG - Chr1:5551279-5551298 None:intergenic 25.0%
! GGTTTAAATTGTAAGTAAAC+TGG + Chr1:5560549-5560568 MsG0180000402.01.T01:intron 25.0%
! GGTTTATTTAACCATATACT+TGG - Chr1:5558747-5558766 None:intergenic 25.0%
! GTAAAGATCTGTAATGATAT+TGG + Chr1:5552567-5552586 MsG0180000402.01.T01:intron 25.0%
! GTAGCTTAACAAAAGAATAT+GGG - Chr1:5555591-5555610 None:intergenic 25.0%
! GTGAAAAGACTAAGAAAAAT+CGG - Chr1:5552495-5552514 None:intergenic 25.0%
! TAAAGATATAGCATTTGAAG+AGG - Chr1:5560028-5560047 None:intergenic 25.0%
! TAAAGGTTTAATCTCATTGT+TGG - Chr1:5557471-5557490 None:intergenic 25.0%
! TAAATAAACAAGAAACGAAG+AGG - Chr1:5551682-5551701 None:intergenic 25.0%
! TAATTAGTGAAATTAGGATG+TGG - Chr1:5558583-5558602 None:intergenic 25.0%
! TAGTTATAATGGTTCAGATT+TGG - Chr1:5550575-5550594 None:intergenic 25.0%
! TATGTGTTTAGCAACAAATT+TGG + Chr1:5550376-5550395 MsG0180000402.01.T01:intron 25.0%
! TCAACAAGATCACATATTTA+CGG - Chr1:5554411-5554430 None:intergenic 25.0%
! TCTTGAAGAGAGATAATTAA+TGG + Chr1:5554506-5554525 MsG0180000402.01.T01:intron 25.0%
! TGAAAGAAATAAGAAGACAT+GGG + Chr1:5551929-5551948 MsG0180000402.01.T01:intron 25.0%
! TGATTATACGTAGATTTGTA+GGG + Chr1:5555504-5555523 MsG0180000402.01.T01:intron 25.0%
! TGGATTATAGAAAAATGATG+TGG - Chr1:5550756-5550775 None:intergenic 25.0%
! TGTAGCTTAACAAAAGAATA+TGG - Chr1:5555592-5555611 None:intergenic 25.0%
! TGTGATATATGCAAAAATTG+TGG - Chr1:5561027-5561046 None:intergenic 25.0%
! TGTTCGTACAATGTAATAAT+TGG - Chr1:5557843-5557862 None:intergenic 25.0%
! TTAACCACAAGTTCATATTT+AGG - Chr1:5549729-5549748 None:intergenic 25.0%
! TTACAATTTAAACCCAAATC+AGG - Chr1:5560543-5560562 None:intergenic 25.0%
! TTCATAACATATTCTCTACT+CGG - Chr1:5553331-5553350 None:intergenic 25.0%
! TTGAATGCTTATAATTTACC+TGG + Chr1:5561129-5561148 MsG0180000402.01.T01:intron 25.0%
! TTGAGAAAAAACAGTAAGAT+TGG - Chr1:5552419-5552438 None:intergenic 25.0%
! TTGATTATACGTAGATTTGT+AGG + Chr1:5555503-5555522 MsG0180000402.01.T01:intron 25.0%
! TTGTCAAAACTAAATGTACT+GGG - Chr1:5560694-5560713 None:intergenic 25.0%
! TTTGCACAAAAAGTAACAAT+TGG + Chr1:5551967-5551986 MsG0180000402.01.T01:intron 25.0%
! TTTGCTCGATATTATTTAGT+AGG + Chr1:5551847-5551866 MsG0180000402.01.T01:intron 25.0%
! TTTGTCAAAACTAAATGTAC+TGG - Chr1:5560695-5560714 None:intergenic 25.0%
!! AAACCTTTTATTAAAACCCT+AGG + Chr1:5559970-5559989 MsG0180000402.01.T01:intron 25.0%
!! ACATTTAAGAGGATTTTACT+AGG - Chr1:5552233-5552252 None:intergenic 25.0%
!! ACTTATTAACCATTTGAGTT+TGG + Chr1:5558332-5558351 MsG0180000402.01.T01:intron 25.0%
!! ACTTTTCAAATATATGCTCA+AGG - Chr1:5550475-5550494 None:intergenic 25.0%
!! ATAGCAAGAGACATTTTTAA+GGG - Chr1:5551025-5551044 None:intergenic 25.0%
!! ATTTTACTAGGAAAATACCT+AGG - Chr1:5552221-5552240 None:intergenic 25.0%
!! CTTAGACTAATCTTAGATTT+TGG + Chr1:5553924-5553943 MsG0180000402.01.T01:intron 25.0%
!! GAATGAAAACTTGATGTTTT+AGG + Chr1:5558222-5558241 MsG0180000402.01.T01:intron 25.0%
!! GGAAATGAAACGTATATTTT+AGG - Chr1:5560760-5560779 None:intergenic 25.0%
!! GTTTTCACTATGTTATTCAA+GGG - Chr1:5553768-5553787 None:intergenic 25.0%
!! TAATTAAAGCATTAGAGGTT+AGG + Chr1:5551218-5551237 MsG0180000402.01.T01:intron 25.0%
!! TACTTTTGGATGAATTTAAG+AGG + Chr1:5559558-5559577 MsG0180000402.01.T01:intron 25.0%
!! TCCAATTATATTTTCCTCTT+GGG - Chr1:5552612-5552631 None:intergenic 25.0%
!! TCGAGATTGTATTAGTTTAA+GGG + Chr1:5556782-5556801 MsG0180000402.01.T01:CDS 25.0%
!! TGAATTTTCCAATTGTTTTC+TGG + Chr1:5553638-5553657 MsG0180000402.01.T01:intron 25.0%
!! TTCCAATTATATTTTCCTCT+TGG - Chr1:5552613-5552632 None:intergenic 25.0%
!! TTCGAGATTGTATTAGTTTA+AGG + Chr1:5556781-5556800 MsG0180000402.01.T01:CDS 25.0%
!! TTTTCATGGACATAATATTG+CGG + Chr1:5560937-5560956 MsG0180000402.01.T01:intron 25.0%
!!! AAATTATTTTACTTAGGCCT+AGG - Chr1:5559990-5560009 None:intergenic 25.0%
!!! AAGAGCATTTCAATGTTTAA+GGG - Chr1:5552461-5552480 None:intergenic 25.0%
!!! AATCTTACTGTTTTTTCTCA+AGG + Chr1:5552418-5552437 MsG0180000402.01.T01:intron 25.0%
!!! AATTATTTTACTTAGGCCTA+GGG - Chr1:5559989-5560008 None:intergenic 25.0%
!!! CAATTTTATTCAGGTTATTG+AGG - Chr1:5556008-5556027 None:intergenic 25.0%
!!! CTAGATTTTCTTTGAGTTTT+TGG - Chr1:5555728-5555747 None:intergenic 25.0%
!!! TAAGAGCATTTCAATGTTTA+AGG - Chr1:5552462-5552481 None:intergenic 25.0%
!!! TCCATTATTTTTGTACTACA+GGG + Chr1:5560604-5560623 MsG0180000402.01.T01:intron 25.0%
!!! TCTTCTTTCTTTGTTACTTT+TGG + Chr1:5550349-5550368 MsG0180000402.01.T01:intron 25.0%
!!! TGTTTAGGTTTTGATTACTT+CGG + Chr1:5549813-5549832 MsG0180000402.01.T01:CDS 25.0%
!!! TTCCATTATTTTTGTACTAC+AGG + Chr1:5560603-5560622 MsG0180000402.01.T01:intron 25.0%
!!! TTTAGCTACTAGTTTAGTTT+TGG + Chr1:5559469-5559488 MsG0180000402.01.T01:intron 25.0%
AAAAAAAAAATCGGACGTTG+AGG - Chr1:5560208-5560227 None:intergenic 30.0%
AAAAAAATGCTAGTACCTCT+AGG + Chr1:5551491-5551510 MsG0180000402.01.T01:intron 30.0%
AAAAAATGCTAGTACCTCTA+GGG + Chr1:5551492-5551511 MsG0180000402.01.T01:intron 30.0%
AAATCTATAGTTAAAGACGG+AGG + Chr1:5554967-5554986 MsG0180000402.01.T01:intron 30.0%
AACCTTATCACGAAGTATAA+AGG - Chr1:5554125-5554144 None:intergenic 30.0%
AAGCTTCTCTAATGAATGAA+CGG - Chr1:5554029-5554048 None:intergenic 30.0%
AAGTATTATGACTAGTGACT+TGG + Chr1:5555270-5555289 MsG0180000402.01.T01:intron 30.0%
AAGTCACTAGTCATAATACT+TGG - Chr1:5555271-5555290 None:intergenic 30.0%
AAGTTTCTAACAATGATGCT+GGG + Chr1:5551153-5551172 MsG0180000402.01.T01:intron 30.0%
AATCAATTATCACATGACCA+TGG + Chr1:5551345-5551364 MsG0180000402.01.T01:intron 30.0%
ACCCAAGAGGAAAATATAAT+TGG + Chr1:5552608-5552627 MsG0180000402.01.T01:intron 30.0%
ACTGATATGTCTATGTACTT+GGG + Chr1:5549600-5549619 MsG0180000402.01.T01:CDS 30.0%
AGAAATCCAGAAAACAACAA+AGG - Chr1:5550685-5550704 None:intergenic 30.0%
AGAAGCAATTCATAACATGA+AGG - Chr1:5560073-5560092 None:intergenic 30.0%
AGAATTACTCAAAACCCTAA+CGG + Chr1:5549303-5549322 MsG0180000402.01.T01:CDS 30.0%
AGCAGTAAGATCCAAATATA+GGG + Chr1:5550822-5550841 MsG0180000402.01.T01:intron 30.0%
AGCTTATAGAAACCACTAAA+AGG - Chr1:5556492-5556511 None:intergenic 30.0%
ATAATCAGATGCTTCTAATG+TGG + Chr1:5556707-5556726 MsG0180000402.01.T01:intron 30.0%
ATATGATTGATGGAATTGGT+CGG + Chr1:5549652-5549671 MsG0180000402.01.T01:CDS 30.0%
ATCACCTAATAAGAGTAGTA+GGG + Chr1:5556290-5556309 MsG0180000402.01.T01:intron 30.0%
ATCGGAAATGTTTACTTTCT+TGG + Chr1:5560874-5560893 MsG0180000402.01.T01:intron 30.0%
ATCGTAATAATAACTAGGCA+TGG - Chr1:5550282-5550301 None:intergenic 30.0%
ATCTAGTAAATTTGTCCACA+AGG + Chr1:5555742-5555761 MsG0180000402.01.T01:intron 30.0%
ATGCAATGCAGTTAGTTATA+TGG - Chr1:5558965-5558984 None:intergenic 30.0%
ATGCTTCTAACCTTATACTA+TGG - Chr1:5558768-5558787 None:intergenic 30.0%
ATTAAAAACAGGTTCACTTG+TGG + Chr1:5555358-5555377 MsG0180000402.01.T01:intron 30.0%
ATTATAACTAATCGATCCGA+AGG + Chr1:5550585-5550604 MsG0180000402.01.T01:intron 30.0%
ATTCCAGTGCATAGAAAAAA+CGG + Chr1:5557800-5557819 MsG0180000402.01.T01:intron 30.0%
ATTTAAACCCAAATCAGGAT+AGG - Chr1:5560538-5560557 None:intergenic 30.0%
ATTTGGATCTTACTGCTAAA+AGG - Chr1:5550819-5550838 None:intergenic 30.0%
CAAAGAAAGAAGACAACAAA+CGG - Chr1:5550342-5550361 None:intergenic 30.0%
CACATATTTACGGACAAATA+CGG - Chr1:5554401-5554420 None:intergenic 30.0%
CATATTATCAGAACATGTCA+TGG + Chr1:5560462-5560481 MsG0180000402.01.T01:CDS 30.0%
CCAATTCCATCAATCATATA+AGG - Chr1:5549651-5549670 None:intergenic 30.0%
CCTTATATGATTGATGGAAT+TGG + Chr1:5549648-5549667 MsG0180000402.01.T01:CDS 30.0%
CTCAAACTGAGACTATTTAA+GGG - Chr1:5554705-5554724 None:intergenic 30.0%
CTTATTGTGATTACAGAGAA+CGG + Chr1:5559874-5559893 MsG0180000402.01.T01:intron 30.0%
GAAAGAAATAAGAAGACATG+GGG + Chr1:5551930-5551949 MsG0180000402.01.T01:intron 30.0%
GAATCATATAGATGATGTCA+GGG + Chr1:5552817-5552836 MsG0180000402.01.T01:intron 30.0%
GATGTCTCAAATTCTGTTTA+TGG + Chr1:5552716-5552735 MsG0180000402.01.T01:intron 30.0%
GATTATACGTAGATTTGTAG+GGG + Chr1:5555505-5555524 MsG0180000402.01.T01:intron 30.0%
GATTGAATCTCTGAACTAAA+TGG - Chr1:5554638-5554657 None:intergenic 30.0%
GGTATATTATCTCTTTCACT+AGG - Chr1:5554104-5554123 None:intergenic 30.0%
GTGAAAGAAATAAGAAGACA+TGG + Chr1:5551928-5551947 MsG0180000402.01.T01:intron 30.0%
GTTAAAGAAACCCAAGTATA+TGG + Chr1:5558733-5558752 MsG0180000402.01.T01:intron 30.0%
TAATCCTAAACCAACCAAAA+AGG - Chr1:5553394-5553413 None:intergenic 30.0%
TACCTTTATACTTCGTGATA+AGG + Chr1:5554120-5554139 MsG0180000402.01.T01:intron 30.0%
TACTCTTATTAGGTGATACA+TGG - Chr1:5556287-5556306 None:intergenic 30.0%
TACTGATATGTCTATGTACT+TGG + Chr1:5549599-5549618 MsG0180000402.01.T01:CDS 30.0%
TAGCAGTAAGATCCAAATAT+AGG + Chr1:5550821-5550840 MsG0180000402.01.T01:intron 30.0%
TAGTTGTCTTTCAATGTTAG+TGG + Chr1:5555151-5555170 MsG0180000402.01.T01:intron 30.0%
TATCACCTAATAAGAGTAGT+AGG + Chr1:5556289-5556308 MsG0180000402.01.T01:intron 30.0%
TATTAGGCTAATGCTCAATA+CGG + Chr1:5555876-5555895 MsG0180000402.01.T01:intron 30.0%
TCAATACTTCCAAACTCAAA+TGG - Chr1:5558344-5558363 None:intergenic 30.0%
TCAGTTTAAATCTGAGCAAT+GGG - Chr1:5551189-5551208 None:intergenic 30.0%
TCATAACATGTTGAGATAAC+CGG - Chr1:5553826-5553845 None:intergenic 30.0%
TCATTCTCCTAAAAACATGA+GGG - Chr1:5558208-5558227 None:intergenic 30.0%
TCCAACATTAAGTCTTCAAA+AGG - Chr1:5554333-5554352 None:intergenic 30.0%
TCTATCACACATCTTTAGAT+AGG + Chr1:5552391-5552410 MsG0180000402.01.T01:intron 30.0%
TCTCTGAACTAAATGGTTAA+AGG - Chr1:5554631-5554650 None:intergenic 30.0%
TGAATCATATAGATGATGTC+AGG + Chr1:5552816-5552835 MsG0180000402.01.T01:intron 30.0%
TGGGACAATATCAATCAAAT+TGG - Chr1:5557451-5557470 None:intergenic 30.0%
TGTTGAAGCAAACTAAAACT+AGG + Chr1:5554062-5554081 MsG0180000402.01.T01:intron 30.0%
TTAAAAACAGGTTCACTTGT+GGG + Chr1:5555359-5555378 MsG0180000402.01.T01:intron 30.0%
TTATAGAAACCACTAAAAGG+AGG - Chr1:5556489-5556508 None:intergenic 30.0%
TTCAGTTTAAATCTGAGCAA+TGG - Chr1:5551190-5551209 None:intergenic 30.0%
TTCATTCTCCTAAAAACATG+AGG - Chr1:5558209-5558228 None:intergenic 30.0%
TTCTTTCATATACACTGACA+AGG + Chr1:5557083-5557102 MsG0180000402.01.T01:intron 30.0%
TTTAGATCTTGTTCCGTATT+AGG + Chr1:5555860-5555879 MsG0180000402.01.T01:intron 30.0%
TTTGGATGAATTTAAGAGGT+AGG + Chr1:5559562-5559581 MsG0180000402.01.T01:intron 30.0%
! AAACGTATAAGCTTTTACAC+AGG - Chr1:5555232-5555251 None:intergenic 30.0%
! ACTTCGGTAAGAATGTTTTA+AGG + Chr1:5549829-5549848 MsG0180000402.01.T01:CDS 30.0%
! ATGTTGCTTACTTTCATGTT+TGG + Chr1:5553263-5553282 MsG0180000402.01.T01:intron 30.0%
! ATTCATTAGAGAAGCTTTTG+AGG + Chr1:5554032-5554051 MsG0180000402.01.T01:intron 30.0%
! ATTTTCCAATTGTTTTCTGG+TGG + Chr1:5553641-5553660 MsG0180000402.01.T01:intron 30.0%
! CACCATAATTAAAGCATTAG+AGG + Chr1:5551213-5551232 MsG0180000402.01.T01:intron 30.0%
! CAGATTTGTGTGTTTCTAAA+GGG + Chr1:5549961-5549980 MsG0180000402.01.T01:CDS 30.0%
! CGTTTTCACTATGTTATTCA+AGG - Chr1:5553769-5553788 None:intergenic 30.0%
! GAAAAAAAGCCTCTTGTTAT+TGG + Chr1:5549510-5549529 MsG0180000402.01.T01:CDS 30.0%
! GATAGCAAGAGACATTTTTA+AGG - Chr1:5551026-5551045 None:intergenic 30.0%
! GTGACAACGTTAAAACTTTT+AGG - Chr1:5554884-5554903 None:intergenic 30.0%
! GTGTAAAAGCTTATACGTTT+TGG + Chr1:5555232-5555251 MsG0180000402.01.T01:intron 30.0%
! GTTGTAATTTGCAACTGATT+AGG + Chr1:5553102-5553121 MsG0180000402.01.T01:intron 30.0%
! GTTTAAGATATAATTCGGTG+TGG - Chr1:5556194-5556213 None:intergenic 30.0%
! GTTTTTAAATGCTATTCCGT+GGG + Chr1:5553357-5553376 MsG0180000402.01.T01:intron 30.0%
! TAATGGGGTCAATTTTATTC+AGG - Chr1:5556017-5556036 None:intergenic 30.0%
! TACTAGAAATCTAGAATGTG+TGG - Chr1:5554234-5554253 None:intergenic 30.0%
! TATTGAGCATTAGCCTAATA+CGG - Chr1:5555876-5555895 None:intergenic 30.0%
! TCAGATTTGTGTGTTTCTAA+AGG + Chr1:5549960-5549979 MsG0180000402.01.T01:CDS 30.0%
! TCGTAATAATAACTTGCCAA+TGG - Chr1:5551134-5551153 None:intergenic 30.0%
! TTCGGATCGATTAGTTATAA+TGG - Chr1:5550586-5550605 None:intergenic 30.0%
!! ACCTTTTGAAGACTTAATGT+TGG + Chr1:5554329-5554348 MsG0180000402.01.T01:intron 30.0%
!! ATCTTTATCTCCGTTTTGAA+TGG + Chr1:5560041-5560060 MsG0180000402.01.T01:intron 30.0%
!! ATGTTCCTTTTGCTTTTGAT+GGG + Chr1:5552957-5552976 MsG0180000402.01.T01:intron 30.0%
!! ATTTAGGGTTTCCATGTTTT+AGG + Chr1:5560178-5560197 MsG0180000402.01.T01:intron 30.0%
!! ATTTTAGGAGCAAATCTTGA+TGG - Chr1:5560808-5560827 None:intergenic 30.0%
!! GCAAAGGCATTAAAAAAACA+TGG + Chr1:5559923-5559942 MsG0180000402.01.T01:intron 30.0%
!! TATGTTCCTTTTGCTTTTGA+TGG + Chr1:5552956-5552975 MsG0180000402.01.T01:intron 30.0%
!! TGTTTTTAAATGCTATTCCG+TGG + Chr1:5553356-5553375 MsG0180000402.01.T01:intron 30.0%
!! TTTTAGGAGCAAATCTTGAT+GGG - Chr1:5560807-5560826 None:intergenic 30.0%
!! TTTTCCAATTGTTTTCTGGT+GGG + Chr1:5553642-5553661 MsG0180000402.01.T01:intron 30.0%
!!! AAACTTGATGTTTTAGGGTT+CGG + Chr1:5558228-5558247 MsG0180000402.01.T01:intron 30.0%
!!! AGAAAAAACGGAGACTTTTT+TGG + Chr1:5557812-5557831 MsG0180000402.01.T01:intron 30.0%
!!! AGATTTTGAAATAAGGTTGC+CGG + Chr1:5553804-5553823 MsG0180000402.01.T01:intron 30.0%
!!! AGTGTTTACCCCTATTTTTT+TGG + Chr1:5550915-5550934 MsG0180000402.01.T01:intron 30.0%
!!! ATGGTCATTTTTGTTGATCA+TGG - Chr1:5554295-5554314 None:intergenic 30.0%
!!! CAAATCTAAATGTCGTTTTG+TGG + Chr1:5560846-5560865 MsG0180000402.01.T01:intron 30.0%
!!! CGGAATATTTTAACTTGTTC+TGG + Chr1:5550099-5550118 MsG0180000402.01.T01:CDS 30.0%
!!! GAATTTTAAGAGTGCTAGTA+AGG + Chr1:5556404-5556423 MsG0180000402.01.T01:CDS 30.0%
!!! TCAACGTCCGATTTTTTTTT+TGG + Chr1:5560207-5560226 MsG0180000402.01.T01:intron 30.0%
!!! TGAAGAGGTACCATTTTAAA+TGG - Chr1:5560013-5560032 None:intergenic 30.0%
!!! TGGCTATACAAGGTTTTAAA+TGG + Chr1:5559619-5559638 MsG0180000402.01.T01:intron 30.0%
!!! TGTCGTTTTGTGGATTTTAT+CGG + Chr1:5560856-5560875 MsG0180000402.01.T01:intron 30.0%
AAAATTCTTAGTGGAGAGTG+AGG + Chr1:5549761-5549780 MsG0180000402.01.T01:CDS 35.0%
AAACAGAGAAATAAAGAGGG+CGG - Chr1:5552006-5552025 None:intergenic 35.0%
AAATAATAACCCCTGAAAGC+AGG - Chr1:5560978-5560997 None:intergenic 35.0%
AAATATATGCTCAAGGAGAC+TGG - Chr1:5550468-5550487 None:intergenic 35.0%
AAATTCTTAGTGGAGAGTGA+GGG + Chr1:5549762-5549781 MsG0180000402.01.T01:CDS 35.0%
AACTGTCACAAGGAATCAAA+AGG + Chr1:5557615-5557634 MsG0180000402.01.T01:intron 35.0%
AAGATCCAAATATAGGGTTG+AGG + Chr1:5550828-5550847 MsG0180000402.01.T01:intron 35.0%
AAGATTTGTGACCACATTCT+AGG - Chr1:5559782-5559801 None:intergenic 35.0%
AAGGTCCAAACCATTCAAAA+CGG - Chr1:5560054-5560073 None:intergenic 35.0%
AAGTCCCTACTACTCTTATT+AGG - Chr1:5556297-5556316 None:intergenic 35.0%
AATCCGTAGCAAGTTATTGT+CGG + Chr1:5560381-5560400 MsG0180000402.01.T01:intron 35.0%
AATGCTAAAGAACCGTTGTA+AGG + Chr1:5557192-5557211 MsG0180000402.01.T01:intron 35.0%
ACATCAGATATCGGCAAAAT+TGG - Chr1:5556456-5556475 None:intergenic 35.0%
ACCACAAGTTCATATTTAGG+TGG - Chr1:5549726-5549745 None:intergenic 35.0%
ACCACCTAAATATGAACTTG+TGG + Chr1:5549722-5549741 MsG0180000402.01.T01:CDS 35.0%
ACGATGAATATGAAGAATGC+AGG - Chr1:5559154-5559173 None:intergenic 35.0%
ACTTAATGTTGGAGCAAGTT+GGG + Chr1:5554340-5554359 MsG0180000402.01.T01:intron 35.0%
ACTTAGTGATGACCATAATG+TGG + Chr1:5552058-5552077 MsG0180000402.01.T01:intron 35.0%
AGAATGCCACCTTATGAAAT+TGG + Chr1:5555007-5555026 MsG0180000402.01.T01:intron 35.0%
AGACAACAGATGGAGATAAT+AGG - Chr1:5551553-5551572 None:intergenic 35.0%
AGAGAAAGAATCACTCATCT+TGG - Chr1:5553194-5553213 None:intergenic 35.0%
AGAGAGATATTGGAGGAAAA+TGG + Chr1:5552260-5552279 MsG0180000402.01.T01:intron 35.0%
AGAGATATTGGAGGAAAATG+GGG + Chr1:5552262-5552281 MsG0180000402.01.T01:intron 35.0%
AGTTTAAGAAACTGGCCAAA+TGG + Chr1:5550990-5551009 MsG0180000402.01.T01:intron 35.0%
ATAAACGTGCCAATAACAAG+AGG - Chr1:5549522-5549541 None:intergenic 35.0%
ATATATCACATTAGTCCACC+TGG + Chr1:5561037-5561056 MsG0180000402.01.T01:intron 35.0%
ATGAACTTGTGGTTAATGGT+GGG + Chr1:5549733-5549752 MsG0180000402.01.T01:CDS 35.0%
ATGTTCATTACCAGATTCAG+AGG + Chr1:5556614-5556633 MsG0180000402.01.T01:CDS 35.0%
ATTGGTCGGACAATTATTGT+TGG + Chr1:5549666-5549685 MsG0180000402.01.T01:CDS 35.0%
ATTTGATGAGTTTGGGAGAT+AGG + Chr1:5549895-5549914 MsG0180000402.01.T01:CDS 35.0%
CAACAATCTCTCAACTATGT+TGG + Chr1:5556750-5556769 MsG0180000402.01.T01:CDS 35.0%
CAACATAGTTGAGAGATTGT+TGG - Chr1:5556752-5556771 None:intergenic 35.0%
CAACCTCTCTTATAATTCCT+CGG + Chr1:5557168-5557187 MsG0180000402.01.T01:intron 35.0%
CACATTGATAAAGCAGTGAA+TGG + Chr1:5558042-5558061 MsG0180000402.01.T01:intron 35.0%
CAGTTAGTTATATGGCATTG+GGG - Chr1:5558957-5558976 None:intergenic 35.0%
CATCAGATATCGGCAAAATT+GGG - Chr1:5556455-5556474 None:intergenic 35.0%
CATCGATAATCTTGATGTTG+TGG + Chr1:5559753-5559772 MsG0180000402.01.T01:intron 35.0%
CCTCAAACTGAGACTATTTA+AGG - Chr1:5554706-5554725 None:intergenic 35.0%
CCTTAAATAGTCTCAGTTTG+AGG + Chr1:5554703-5554722 MsG0180000402.01.T01:intron 35.0%
CTAAATAACTAACTACGGTC+AGG - Chr1:5553081-5553100 None:intergenic 35.0%
CTCTTGACTCAACATTTAAG+AGG - Chr1:5552244-5552263 None:intergenic 35.0%
CTTAACTGAATGCAAACTCT+TGG + Chr1:5551587-5551606 MsG0180000402.01.T01:intron 35.0%
CTTATCACCTATCCTGATTT+GGG + Chr1:5560528-5560547 MsG0180000402.01.T01:CDS 35.0%
GAAGTTTCTAACAATGATGC+TGG + Chr1:5551152-5551171 MsG0180000402.01.T01:intron 35.0%
GAGAAAGAATCACTCATCTT+GGG - Chr1:5553193-5553212 None:intergenic 35.0%
GAGAGATATTGGAGGAAAAT+GGG + Chr1:5552261-5552280 MsG0180000402.01.T01:intron 35.0%
GAGTAATTCTGATCAACCAA+GGG - Chr1:5549293-5549312 None:intergenic 35.0%
GATAATAGTGTGGCTATACA+AGG + Chr1:5559609-5559628 MsG0180000402.01.T01:intron 35.0%
GATAGAACGAAAAATGCCTT+AGG - Chr1:5559129-5559148 None:intergenic 35.0%
GATTGATATTGTCCCAACTT+GGG + Chr1:5557583-5557602 MsG0180000402.01.T01:intron 35.0%
GATTTCCTCAACCCTATATT+TGG - Chr1:5550836-5550855 None:intergenic 35.0%
GCAAGATAACATACTCTGTT+AGG - Chr1:5550158-5550177 None:intergenic 35.0%
GCAGTTAGTTATATGGCATT+GGG - Chr1:5558958-5558977 None:intergenic 35.0%
GCATACTGAGAGAGATAAAA+TGG - Chr1:5554210-5554229 None:intergenic 35.0%
GCCCTGTAGTACAAAAATAA+TGG - Chr1:5560608-5560627 None:intergenic 35.0%
GCTTATGGAGAAACATTTGT+TGG + Chr1:5554668-5554687 MsG0180000402.01.T01:intron 35.0%
GCTTTGTCACAAAAGTTCAA+AGG - Chr1:5560236-5560255 None:intergenic 35.0%
GGAATAGACTTCGCATATAA+AGG + Chr1:5555897-5555916 MsG0180000402.01.T01:intron 35.0%
GGTAAGGAATATGCATTACA+AGG + Chr1:5552283-5552302 MsG0180000402.01.T01:intron 35.0%
GTCCAATGAACATCAGATAT+CGG - Chr1:5556465-5556484 None:intergenic 35.0%
GTGGACATTTATGAGTGTTT+AGG + Chr1:5549798-5549817 MsG0180000402.01.T01:CDS 35.0%
GTTCTGTCTACAAAACTAGA+GGG - Chr1:5552363-5552382 None:intergenic 35.0%
GTTGAGGAAAACCTAAAACA+TGG - Chr1:5560192-5560211 None:intergenic 35.0%
GTTGTTGTGAGAGATTATGA+AGG + Chr1:5556561-5556580 MsG0180000402.01.T01:CDS 35.0%
TAAAAACAGGTTCACTTGTG+GGG + Chr1:5555360-5555379 MsG0180000402.01.T01:intron 35.0%
TAAATAATGAGCAGCTTGGT+TGG - Chr1:5556849-5556868 None:intergenic 35.0%
TAATCAATCCTCTCTGTGTT+TGG + Chr1:5551524-5551543 MsG0180000402.01.T01:intron 35.0%
TACTTGGGTTTCTTTAACTC+AGG - Chr1:5558731-5558750 None:intergenic 35.0%
TAGAGGATCATGTGATCAAA+TGG + Chr1:5550648-5550667 MsG0180000402.01.T01:intron 35.0%
TAGCAAGTTATTGTCGGATT+TGG + Chr1:5560387-5560406 MsG0180000402.01.T01:intron 35.0%
TAGCTAAATAATGAGCAGCT+TGG - Chr1:5556853-5556872 None:intergenic 35.0%
TATATCACATTAGTCCACCT+GGG + Chr1:5561038-5561057 MsG0180000402.01.T01:intron 35.0%
TATGAACTTGTGGTTAATGG+TGG + Chr1:5549732-5549751 MsG0180000402.01.T01:CDS 35.0%
TATGAAGAGAAGGATGACAA+AGG - Chr1:5556156-5556175 None:intergenic 35.0%
TCACTAGTCATAATACTTGG+AGG - Chr1:5555268-5555287 None:intergenic 35.0%
TCAGAGATTCAATCCATGAT+TGG + Chr1:5554644-5554663 MsG0180000402.01.T01:intron 35.0%
TCAGGGTAAACATAGTCATA+TGG - Chr1:5549465-5549484 None:intergenic 35.0%
TCTACTCCAATTTCATAAGG+TGG - Chr1:5555016-5555035 None:intergenic 35.0%
TCTCAAAGTGCAATATTGCA+TGG + Chr1:5555616-5555635 MsG0180000402.01.T01:intron 35.0%
TCTTATCACCTATCCTGATT+TGG + Chr1:5560527-5560546 MsG0180000402.01.T01:CDS 35.0%
TGAATTGAGAAACGCGATTA+TGG - Chr1:5559043-5559062 None:intergenic 35.0%
TGAGAACTGAAACATGACTT+TGG + Chr1:5553300-5553319 MsG0180000402.01.T01:intron 35.0%
TGAGTAATTCTGATCAACCA+AGG - Chr1:5549294-5549313 None:intergenic 35.0%
TGATGAGAAGGAGAGTAAAT+GGG + Chr1:5549869-5549888 MsG0180000402.01.T01:CDS 35.0%
TGATTGATATTGTCCCAACT+TGG + Chr1:5557582-5557601 MsG0180000402.01.T01:intron 35.0%
TGCAGTTAGTTATATGGCAT+TGG - Chr1:5558959-5558978 None:intergenic 35.0%
TGTTCTGTCTACAAAACTAG+AGG - Chr1:5552364-5552383 None:intergenic 35.0%
TGTTGAGTCAAGAGAGATAT+TGG + Chr1:5552250-5552269 MsG0180000402.01.T01:intron 35.0%
TGTTGTTGAAATGTTGTTGC+TGG - Chr1:5558882-5558901 None:intergenic 35.0%
TTAGTCCCATCAAAAGCAAA+AGG - Chr1:5552965-5552984 None:intergenic 35.0%
TTCACATTTGGAGATTAGCA+AGG + Chr1:5555828-5555847 MsG0180000402.01.T01:intron 35.0%
TTGATGAGAAGGAGAGTAAA+TGG + Chr1:5549868-5549887 MsG0180000402.01.T01:CDS 35.0%
TTGATTCCTTGTGACAGTTA+TGG - Chr1:5557614-5557633 None:intergenic 35.0%
TTGCACATGAAGTATGAGTT+TGG + Chr1:5554740-5554759 MsG0180000402.01.T01:intron 35.0%
TTGCATGGATCCTGAATTAT+TGG + Chr1:5555479-5555498 MsG0180000402.01.T01:intron 35.0%
TTTATCTGCATAGACTCTCA+AGG - Chr1:5551082-5551101 None:intergenic 35.0%
TTTGATGAGTTTGGGAGATA+GGG + Chr1:5549896-5549915 MsG0180000402.01.T01:CDS 35.0%
! AAACCAACGGAGATGAATTT+TGG + Chr1:5549568-5549587 MsG0180000402.01.T01:CDS 35.0%
! AACAGCAAAATGTTTCTGCA+AGG - Chr1:5552086-5552105 None:intergenic 35.0%
! AGGATGACAAAGGTATACAA+AGG - Chr1:5556146-5556165 None:intergenic 35.0%
! AGTTGAAGAGTATGAAGAGA+AGG - Chr1:5556166-5556185 None:intergenic 35.0%
! ATGACAAAGGTATACAAAGG+GGG - Chr1:5556143-5556162 None:intergenic 35.0%
! CAGGTTGAGAATGTGTAAAA+AGG - Chr1:5555437-5555456 None:intergenic 35.0%
! CGATTTTACTTTGCTTCTGT+CGG + Chr1:5553226-5553245 MsG0180000402.01.T01:intron 35.0%
! CTTTTACACAGGCTCATATT+CGG - Chr1:5555221-5555240 None:intergenic 35.0%
! CTTTTGTGACAAAGCTTGAA+TGG + Chr1:5560241-5560260 MsG0180000402.01.T01:intron 35.0%
! GATGAAACCAAAGTGTTTCT+TGG - Chr1:5553570-5553589 None:intergenic 35.0%
! GATGACAAAGGTATACAAAG+GGG - Chr1:5556144-5556163 None:intergenic 35.0%
! GGATGACAAAGGTATACAAA+GGG - Chr1:5556145-5556164 None:intergenic 35.0%
! GGATTCAATTTCACTAGCTT+TGG + Chr1:5553419-5553438 MsG0180000402.01.T01:intron 35.0%
! GTTTGTATATAAGTTGGGGA+TGG - Chr1:5551275-5551294 None:intergenic 35.0%
! TATGGATTGTCATGATCAGA+AGG - Chr1:5555960-5555979 None:intergenic 35.0%
! TGTGTTTAGGTTTGATGAGA+AGG + Chr1:5549857-5549876 MsG0180000402.01.T01:CDS 35.0%
! TTGCTAACCCTCATGTTTTT+AGG + Chr1:5558198-5558217 MsG0180000402.01.T01:intron 35.0%
! TTGTTGATGGGAGATTGATA+GGG - Chr1:5549207-5549226 None:intergenic 35.0%
! TTTCAACGAGACTGATTTCT+TGG - Chr1:5549550-5549569 None:intergenic 35.0%
!! AAATTGAGTGGTGTTGTTGA+TGG - Chr1:5549220-5549239 None:intergenic 35.0%
!! AATCCGACAATAACTTGCTA+CGG - Chr1:5560387-5560406 None:intergenic 35.0%
!! AATGCATAACTTGCTTCTCT+AGG + Chr1:5551244-5551263 MsG0180000402.01.T01:intron 35.0%
!! AATTGAGTGGTGTTGTTGAT+GGG - Chr1:5549219-5549238 None:intergenic 35.0%
!! AGGCCTAGGGTTTTAATAAA+AGG - Chr1:5559976-5559995 None:intergenic 35.0%
!! AGTTTTTGTGCCTTTTTGGT+TGG + Chr1:5553381-5553400 MsG0180000402.01.T01:intron 35.0%
!! ATGGGTTGATTTGATGAGTT+TGG + Chr1:5549887-5549906 MsG0180000402.01.T01:CDS 35.0%
!! TATCTCCGTTTTGAATGGTT+TGG + Chr1:5560046-5560065 MsG0180000402.01.T01:intron 35.0%
!! TGCTAAAAAGGTATCTCTTC+AGG + Chr1:5559842-5559861 MsG0180000402.01.T01:intron 35.0%
!! TGGGTTGATTTGATGAGTTT+GGG + Chr1:5549888-5549907 MsG0180000402.01.T01:CDS 35.0%
!! TGTATCTTTGACTTGGATCA+AGG + Chr1:5550050-5550069 MsG0180000402.01.T01:CDS 35.0%
!! TTGCAGAAACATTTTGCTGT+TGG + Chr1:5552085-5552104 MsG0180000402.01.T01:intron 35.0%
!! TTTCCAATTGTTTTCTGGTG+GGG + Chr1:5553643-5553662 MsG0180000402.01.T01:intron 35.0%
!!! AAGAGTTTGGTTTTACCGTT+AGG - Chr1:5549321-5549340 None:intergenic 35.0%
!!! AGAGTTTGGTTTTACCGTTA+GGG - Chr1:5549320-5549339 None:intergenic 35.0%
!!! CATTTTTAAGTTCGGGATCT+TGG - Chr1:5550874-5550893 None:intergenic 35.0%
!!! GAACATCGATTTTGAGTGAT+AGG - Chr1:5553995-5554014 None:intergenic 35.0%
!!! GAGATAGGGTTTTGTTTTTG+GGG + Chr1:5549910-5549929 MsG0180000402.01.T01:CDS 35.0%
!!! GGAGATAGGGTTTTGTTTTT+GGG + Chr1:5549909-5549928 MsG0180000402.01.T01:CDS 35.0%
!!! TGCAGAAACATTTTGCTGTT+GGG + Chr1:5552086-5552105 MsG0180000402.01.T01:intron 35.0%
AAAATACCTAGGAGACAGAC+CGG - Chr1:5552210-5552229 None:intergenic 40.0%
AAAGAATCACTCATCTTGGG+AGG - Chr1:5553190-5553209 None:intergenic 40.0%
AAAGGAACATATCCACAGTG+CGG - Chr1:5552947-5552966 None:intergenic 40.0%
AACAGAGAAATAAAGAGGGC+GGG - Chr1:5552005-5552024 None:intergenic 40.0%
AACTCATGTCGATCTTAGGA+AGG + Chr1:5555384-5555403 MsG0180000402.01.T01:intron 40.0%
AACTGAAACATGACTTTGGC+AGG + Chr1:5553304-5553323 MsG0180000402.01.T01:intron 40.0%
AAGACTGCAGAAATACAAGG+CGG - Chr1:5556920-5556939 None:intergenic 40.0%
AATGACCATTCACTCGTTAG+AGG + Chr1:5554306-5554325 MsG0180000402.01.T01:intron 40.0%
ACAAGGAGTTCCATAATGCT+GGG + Chr1:5552300-5552319 MsG0180000402.01.T01:intron 40.0%
ACACCAAAATTCATCTCCGT+TGG - Chr1:5549574-5549593 None:intergenic 40.0%
ACGAAAAATGCCTTAGGTGA+AGG - Chr1:5559123-5559142 None:intergenic 40.0%
ACTACGGTCAGGAAATAATC+AGG - Chr1:5553070-5553089 None:intergenic 40.0%
AGCAGCAAGTAATATGCTTC+TGG - Chr1:5561004-5561023 None:intergenic 40.0%
AGTTATGGATTCACCCAAGT+TGG - Chr1:5557599-5557618 None:intergenic 40.0%
ATAGGATTCCAAACACAGAG+AGG - Chr1:5551535-5551554 None:intergenic 40.0%
ATCAGATGTAGAAGCTCCTT+TGG - Chr1:5549075-5549094 None:intergenic 40.0%
ATCGATAATGCAAAGAGTCG+TGG + Chr1:5559679-5559698 MsG0180000402.01.T01:intron 40.0%
ATGATTGATACGAGAGGAGT+GGG - Chr1:5549347-5549366 None:intergenic 40.0%
ATTGTGATTACAGAGAACGG+CGG + Chr1:5559877-5559896 MsG0180000402.01.T01:intron 40.0%
CAATTATCACATGACCATGG+TGG + Chr1:5551348-5551367 MsG0180000402.01.T01:intron 40.0%
CACAACTCTATCAAAGAGAC+TGG - Chr1:5553616-5553635 None:intergenic 40.0%
CACATGGTTTCATATGCTCA+AGG - Chr1:5552145-5552164 None:intergenic 40.0%
CATATAGCCATAGCTAATCC+CGG + Chr1:5552188-5552207 MsG0180000402.01.T01:intron 40.0%
CATCTTCTGCTTTCTTCAAG+AGG + Chr1:5561160-5561179 MsG0180000402.01.T01:intron 40.0%
CGATAATCTTGATGTTGTGG+TGG + Chr1:5559756-5559775 MsG0180000402.01.T01:intron 40.0%
CGCGTTTCTCAATTCACTTA+TGG + Chr1:5559047-5559066 MsG0180000402.01.T01:intron 40.0%
CGGACAATTATTGTTGGACT+TGG + Chr1:5549672-5549691 MsG0180000402.01.T01:CDS 40.0%
GAAAAACAAACGAGCGAATC+AGG - Chr1:5560327-5560346 None:intergenic 40.0%
GACTTAATGTTGGAGCAAGT+TGG + Chr1:5554339-5554358 MsG0180000402.01.T01:intron 40.0%
GATGAGATGATTGATACGAG+AGG - Chr1:5549353-5549372 None:intergenic 40.0%
GATTATGTAACATGCCCTAG+AGG - Chr1:5551509-5551528 None:intergenic 40.0%
GCTCCACTACTTGATGAATT+GGG - Chr1:5555569-5555588 None:intergenic 40.0%
GGAAACTTGAGGGTTAGATT+GGG - Chr1:5549180-5549199 None:intergenic 40.0%
GGTTAGATTGGGAATTGGTA+AGG - Chr1:5549169-5549188 None:intergenic 40.0%
GTAATTTGACGACTCTAGTC+AGG + Chr1:5553732-5553751 MsG0180000402.01.T01:intron 40.0%
GTGAATCCATAACTGTCACA+AGG + Chr1:5557605-5557624 MsG0180000402.01.T01:intron 40.0%
GTGCAATATTGCATGGTTGT+TGG + Chr1:5555623-5555642 MsG0180000402.01.T01:intron 40.0%
GTTATGGATTCACCCAAGTT+GGG - Chr1:5557598-5557617 None:intergenic 40.0%
TAAGCTTAATGTTGACGCAG+CGG + Chr1:5556506-5556525 MsG0180000402.01.T01:CDS 40.0%
TAAGGGACACTGATACCATT+TGG - Chr1:5551008-5551027 None:intergenic 40.0%
TACAAGGAGTTCCATAATGC+TGG + Chr1:5552299-5552318 MsG0180000402.01.T01:intron 40.0%
TACTTCATGTGCAACTGCAT+AGG - Chr1:5554734-5554753 None:intergenic 40.0%
TATCAGTATGTACTCTGCCA+TGG + Chr1:5551409-5551428 MsG0180000402.01.T01:intron 40.0%
TATTCCGGACAATCAGACAA+AGG - Chr1:5550086-5550105 None:intergenic 40.0%
TATTGGAGGAAAATGGGGTA+AGG + Chr1:5552267-5552286 MsG0180000402.01.T01:intron 40.0%
TCACTTGTGTCACACTATGT+TGG - Chr1:5554595-5554614 None:intergenic 40.0%
TCAGATGTAGAAGCTCCTTT+GGG - Chr1:5549074-5549093 None:intergenic 40.0%
TCAGTCTCGTTGAAAACCAA+CGG + Chr1:5549555-5549574 MsG0180000402.01.T01:CDS 40.0%
TCCAGAAAACAACAAAGGTC+TGG - Chr1:5550680-5550699 None:intergenic 40.0%
TGAACTTGTGGTTAATGGTG+GGG + Chr1:5549734-5549753 MsG0180000402.01.T01:CDS 40.0%
TGAGTCAAGAGAGATATTGG+AGG + Chr1:5552253-5552272 MsG0180000402.01.T01:intron 40.0%
TGCCGATATCTGATGTTCAT+TGG + Chr1:5556460-5556479 MsG0180000402.01.T01:CDS 40.0%
TGCTACTGATATGTATCTGC+AGG + Chr1:5560437-5560456 MsG0180000402.01.T01:intron 40.0%
TGGAAACTTGAGGGTTAGAT+TGG - Chr1:5549181-5549200 None:intergenic 40.0%
TGGGAACTGTATCTTTGACT+TGG + Chr1:5550043-5550062 MsG0180000402.01.T01:CDS 40.0%
TGGGGGCAAAAAATTCTTAG+TGG + Chr1:5549752-5549771 MsG0180000402.01.T01:CDS 40.0%
TGGTCATCACTAAGTAGCAA+AGG - Chr1:5552053-5552072 None:intergenic 40.0%
TTACTGCTAAAAGGTCGACA+TGG - Chr1:5550810-5550829 None:intergenic 40.0%
TTCACCTTTGTCTGATTGTC+CGG + Chr1:5550079-5550098 MsG0180000402.01.T01:CDS 40.0%
TTCTCCATAAGCACCAATCA+TGG - Chr1:5554660-5554679 None:intergenic 40.0%
TTGAGACTTCCTTCAACACA+CGG - Chr1:5560114-5560133 None:intergenic 40.0%
TTGAGGGTTAGATTGGGAAT+TGG - Chr1:5549174-5549193 None:intergenic 40.0%
TTGCCGAGGAATTATAAGAG+AGG - Chr1:5557174-5557193 None:intergenic 40.0%
! AAAGGCACAAAAACTTCCCA+CGG - Chr1:5553376-5553395 None:intergenic 40.0%
! AGAAGCTTTAGCTATGCGAA+AGG + Chr1:5556641-5556660 MsG0180000402.01.T01:CDS 40.0%
! ATTGTGACTTTTGACCACCA+TGG - Chr1:5551365-5551384 None:intergenic 40.0%
! CAATCCATGATTGGTGCTTA+TGG + Chr1:5554653-5554672 MsG0180000402.01.T01:intron 40.0%
! CTTTGATAGTAGCTGTGTTG+CGG + Chr1:5559721-5559740 MsG0180000402.01.T01:intron 40.0%
! GAAACCAAAGTGTTTCTTGG+AGG - Chr1:5553567-5553586 None:intergenic 40.0%
! GAAGCTTTAGCTATGCGAAA+GGG + Chr1:5556642-5556661 MsG0180000402.01.T01:CDS 40.0%
! GAGACATCTGCGTTTTCAAA+GGG + Chr1:5549622-5549641 MsG0180000402.01.T01:CDS 40.0%
! GGAGAAACATTTGTTGGAAG+AGG + Chr1:5554674-5554693 MsG0180000402.01.T01:intron 40.0%
! GGGAAGTTTTTGTGCCTTTT+TGG + Chr1:5553377-5553396 MsG0180000402.01.T01:intron 40.0%
! GTTGTTGATGGGAGATTGAT+AGG - Chr1:5549208-5549227 None:intergenic 40.0%
! TGACAGCAACGATCTTTTCA+GGG - Chr1:5549482-5549501 None:intergenic 40.0%
! TGTTGATGGGAGATTGATAG+GGG - Chr1:5549206-5549225 None:intergenic 40.0%
!! CGAGTTTTGTGTGACTCAAA+TGG + Chr1:5554845-5554864 MsG0180000402.01.T01:intron 40.0%
!! GAATTATTTTTCCCGCACTG+TGG + Chr1:5552932-5552951 MsG0180000402.01.T01:intron 40.0%
!! GATTATGAAGGTGTTGTCGT+TGG + Chr1:5556573-5556592 MsG0180000402.01.T01:CDS 40.0%
!! GGTTGGTTTAGGATTAGTCA+TGG + Chr1:5553398-5553417 MsG0180000402.01.T01:intron 40.0%
!! TAAGAGTGCTAGTAAGGTGT+TGG + Chr1:5556410-5556429 MsG0180000402.01.T01:CDS 40.0%
!! TTCCAATTGTTTTCTGGTGG+GGG + Chr1:5553644-5553663 MsG0180000402.01.T01:intron 40.0%
!!! AGGGTTTTGTTTTTGGGGAA+TGG + Chr1:5549915-5549934 MsG0180000402.01.T01:CDS 40.0%
!!! GGGAGATAGGGTTTTGTTTT+TGG + Chr1:5549908-5549927 MsG0180000402.01.T01:CDS 40.0%
!!! TCCAGACCTTTGTTGTTTTC+TGG + Chr1:5550676-5550695 MsG0180000402.01.T01:intron 40.0%
!!! TCTCCGTTTTTTCTATGCAC+TGG - Chr1:5557806-5557825 None:intergenic 40.0%
!!! TGTGCCTTTTTGGTTGGTTT+AGG + Chr1:5553387-5553406 MsG0180000402.01.T01:intron 40.0%
AAATACCTAGGAGACAGACC+GGG - Chr1:5552209-5552228 None:intergenic 45.0%
AAGACATGGGGCACAACATT+GGG + Chr1:5551942-5551961 MsG0180000402.01.T01:intron 45.0%
AAGGAACATATCCACAGTGC+GGG - Chr1:5552946-5552965 None:intergenic 45.0%
AAGGTCCTCTAACGAGTGAA+TGG - Chr1:5554314-5554333 None:intergenic 45.0%
AATAAGAGGCAGAGTGTGTC+AGG + Chr1:5551321-5551340 MsG0180000402.01.T01:intron 45.0%
ACAAGGCTAAGACGAACTCA+TGG + Chr1:5555759-5555778 MsG0180000402.01.T01:intron 45.0%
ACAGAGAAATAAAGAGGGCG+GGG - Chr1:5552004-5552023 None:intergenic 45.0%
ACGTAGATTTGTAGGGGACA+GGG + Chr1:5555511-5555530 MsG0180000402.01.T01:intron 45.0%
ACTTCCATTCCGTGTGTTGA+AGG + Chr1:5560102-5560121 MsG0180000402.01.T01:intron 45.0%
ACTTCCTTCAACACACGGAA+TGG - Chr1:5560109-5560128 None:intergenic 45.0%
ACTTTGCTTCTGTCGGATTG+AGG + Chr1:5553233-5553252 MsG0180000402.01.T01:intron 45.0%
AGACTGACACCTAGTGTCAA+CGG - Chr1:5550533-5550552 None:intergenic 45.0%
ATAGCACTAACAGACCCAAG+AGG + Chr1:5552595-5552614 MsG0180000402.01.T01:intron 45.0%
ATCCGATAGAGGGTGATAAG+TGG + Chr1:5556529-5556548 MsG0180000402.01.T01:CDS 45.0%
ATGCGCTTGAAGACAACAGA+TGG - Chr1:5551563-5551582 None:intergenic 45.0%
CAAGGAGTTCCATAATGCTG+GGG + Chr1:5552301-5552320 MsG0180000402.01.T01:intron 45.0%
CATTTGTCGATCCACTCTGT+AGG - Chr1:5550128-5550147 None:intergenic 45.0%
CCTTCAACACCAAATGACAC+CGG - Chr1:5550730-5550749 None:intergenic 45.0%
CCTTCCTCCAAGAAACACTT+TGG + Chr1:5553560-5553579 MsG0180000402.01.T01:intron 45.0%
CTGCATCATGCAATCTTTGC+AGG - Chr1:5557122-5557141 None:intergenic 45.0%
CTGTCTCTGTTGCTGTGTAT+GGG + Chr1:5560487-5560506 MsG0180000402.01.T01:CDS 45.0%
CTTATATGGCCCCAGCATTA+TGG - Chr1:5552313-5552332 None:intergenic 45.0%
GAACTTGTGGTTAATGGTGG+GGG + Chr1:5549735-5549754 MsG0180000402.01.T01:CDS 45.0%
GAATCCTAACTCGAAGCACA+TGG - Chr1:5552161-5552180 None:intergenic 45.0%
GATGATTGATACGAGAGGAG+TGG - Chr1:5549348-5549367 None:intergenic 45.0%
GCAGAAGATGATAAGCAACC+AGG - Chr1:5561150-5561169 None:intergenic 45.0%
GCCAAGACTGCAGAAATACA+AGG - Chr1:5556923-5556942 None:intergenic 45.0%
GGAGAGAGAGTGAAATTGAG+TGG - Chr1:5549232-5549251 None:intergenic 45.0%
GGCTCCACTACTTGATGAAT+TGG - Chr1:5555570-5555589 None:intergenic 45.0%
GGGAAACTCATGTCGATCTT+AGG + Chr1:5555380-5555399 MsG0180000402.01.T01:intron 45.0%
GGTCGACATGGAGAAGAAAA+AGG - Chr1:5550798-5550817 None:intergenic 45.0%
GTGCCCAATTCATCAAGTAG+TGG + Chr1:5555563-5555582 MsG0180000402.01.T01:intron 45.0%
GTTGAAGTGGTGGTTTGATG+AGG - Chr1:5549269-5549288 None:intergenic 45.0%
GTTGGGATATTACGAGCCTT+CGG - Chr1:5550604-5550623 None:intergenic 45.0%
TACGTAGATTTGTAGGGGAC+AGG + Chr1:5555510-5555529 MsG0180000402.01.T01:intron 45.0%
TATACACCGGACATCACCAT+TGG + Chr1:5551115-5551134 MsG0180000402.01.T01:intron 45.0%
TCAACGAATCCGTTGACACT+AGG + Chr1:5550521-5550540 MsG0180000402.01.T01:intron 45.0%
TCAGGATAGGTGATAAGAGC+TGG - Chr1:5560525-5560544 None:intergenic 45.0%
TCCGATAGAGGGTGATAAGT+GGG + Chr1:5556530-5556549 MsG0180000402.01.T01:CDS 45.0%
TCTGTCTCTGTTGCTGTGTA+TGG + Chr1:5560486-5560505 MsG0180000402.01.T01:CDS 45.0%
TGGGAGGCTAGGAGATAAAA+GGG - Chr1:5553174-5553193 None:intergenic 45.0%
TGTCTCTGTTGCTGTGTATG+GGG + Chr1:5560488-5560507 MsG0180000402.01.T01:CDS 45.0%
TTCCATCTCTCCTTCACCTA+AGG + Chr1:5559110-5559129 MsG0180000402.01.T01:intron 45.0%
TTCTGCAAGGAGCCACATTA+TGG - Chr1:5552073-5552092 None:intergenic 45.0%
TTGGGAGGCTAGGAGATAAA+AGG - Chr1:5553175-5553194 None:intergenic 45.0%
! AACTTGCCAATGGTGATGTC+CGG - Chr1:5551124-5551143 None:intergenic 45.0%
! ACATCTGCGTTTTCAAAGGG+CGG + Chr1:5549625-5549644 MsG0180000402.01.T01:CDS 45.0%
! ATAGGGGTGTGGAAACTTGA+GGG - Chr1:5549190-5549209 None:intergenic 45.0%
! CACTAAAATCGAGAGCGTGA+GGG - Chr1:5549386-5549405 None:intergenic 45.0%
! CATCGAGCTTTTGTATCTGC+CGG + Chr1:5550708-5550727 MsG0180000402.01.T01:intron 45.0%
! CATTGGACACCTCCTTTTAG+TGG + Chr1:5556477-5556496 MsG0180000402.01.T01:CDS 45.0%
! CCAAAGTGTTTCTTGGAGGA+AGG - Chr1:5553563-5553582 None:intergenic 45.0%
! CTCGTGTTATTCTTGACACG+TGG - Chr1:5553961-5553980 None:intergenic 45.0%
! GAAACCATGTGCTTCGAGTT+AGG + Chr1:5552154-5552173 MsG0180000402.01.T01:intron 45.0%
! GCCTTGTATTTCTGCAGTCT+TGG + Chr1:5556919-5556938 MsG0180000402.01.T01:intron 45.0%
! GGAGACATCTGCGTTTTCAA+AGG + Chr1:5549621-5549640 MsG0180000402.01.T01:CDS 45.0%
! GTGACAGCAACGATCTTTTC+AGG - Chr1:5549483-5549502 None:intergenic 45.0%
! TCACTAAAATCGAGAGCGTG+AGG - Chr1:5549387-5549406 None:intergenic 45.0%
!! ATGAGTTCGTCTTAGCCTTG+TGG - Chr1:5555760-5555779 None:intergenic 45.0%
!! GATGAGGAAGAAAGAGCGTT+TGG - Chr1:5549253-5549272 None:intergenic 45.0%
!! TGATAAGAGCTGGTTTGTCC+TGG - Chr1:5560515-5560534 None:intergenic 45.0%
!! TTGTATCTGCCGGTGTCATT+TGG + Chr1:5550718-5550737 MsG0180000402.01.T01:intron 45.0%
!! TTGTCGTTGGTGCTAGTTGT+TGG + Chr1:5556586-5556605 MsG0180000402.01.T01:CDS 45.0%
!!! GAAAAAATAAATTTTAAATA+AGG + Chr1:5558362-5558381 MsG0180000402.01.T01:intron 5.0%
AAGGTTTGTGAGCACGCTCT+AGG - Chr1:5559957-5559976 None:intergenic 50.0%
ACGGTTCTTTAGCATTGCCG+AGG - Chr1:5557188-5557207 None:intergenic 50.0%
AGAGAAATAAAGAGGGCGGG+GGG - Chr1:5552002-5552021 None:intergenic 50.0%
AGAGCGTGAGGGAAAAGAAG+AGG - Chr1:5549375-5549394 None:intergenic 50.0%
ATCACTCATCTTGGGAGGCT+AGG - Chr1:5553185-5553204 None:intergenic 50.0%
ATCAGACGTCTCCTGCTTTC+AGG + Chr1:5560964-5560983 MsG0180000402.01.T01:intron 50.0%
ATGGGAGATTGATAGGGGTG+TGG - Chr1:5549201-5549220 None:intergenic 50.0%
CAGAGAAATAAAGAGGGCGG+GGG - Chr1:5552003-5552022 None:intergenic 50.0%
CAGTATGTACTCTGCCATGG+TGG + Chr1:5551412-5551431 MsG0180000402.01.T01:intron 50.0%
CATATCCACCGACACGGAAT+CGG - Chr1:5559088-5559107 None:intergenic 50.0%
CCCCACTTATCACCCTCTAT+CGG - Chr1:5556534-5556553 None:intergenic 50.0%
CCGATAGAGGGTGATAAGTG+GGG + Chr1:5556531-5556550 MsG0180000402.01.T01:CDS 50.0%
CGCTCGTGAAACAGAATCGT+CGG + Chr1:5558802-5558821 MsG0180000402.01.T01:intron 50.0%
CGTAGATTTGTAGGGGACAG+GGG + Chr1:5555512-5555531 MsG0180000402.01.T01:intron 50.0%
CTCCCCCACCAGAAAACAAT+TGG - Chr1:5553649-5553668 None:intergenic 50.0%
GAAGACATGGGGCACAACAT+TGG + Chr1:5551941-5551960 MsG0180000402.01.T01:intron 50.0%
GAGGAGTGGGTGTAAGAGTT+TGG - Chr1:5549334-5549353 None:intergenic 50.0%
GAGGGTGATAAGTGGGGTAT+TGG + Chr1:5556537-5556556 MsG0180000402.01.T01:CDS 50.0%
GAGTTCAACGTCGAGTCGTT+GGG - Chr1:5549100-5549119 None:intergenic 50.0%
GATCGCATGACTTCGATGAC+TGG + Chr1:5549694-5549713 MsG0180000402.01.T01:CDS 50.0%
GATTCTGTTTCACGAGCGAG+CGG - Chr1:5558800-5558819 None:intergenic 50.0%
GCTTCTGCAACCTCTGAATC+TGG - Chr1:5556627-5556646 None:intergenic 50.0%
GGAATCCATATCCACCGACA+CGG - Chr1:5559094-5559113 None:intergenic 50.0%
GTTAGTGCCTTTGACCACCA+TGG - Chr1:5551429-5551448 None:intergenic 50.0%
TACTCTGCCATGGTGGTCAA+AGG + Chr1:5551419-5551438 MsG0180000402.01.T01:intron 50.0%
TCAGACGTCTCCTGCTTTCA+GGG + Chr1:5560965-5560984 MsG0180000402.01.T01:intron 50.0%
TGAGGGGACTGATGTTGATG+TGG + Chr1:5556347-5556366 MsG0180000402.01.T01:intron 50.0%
TGCCTTAGGTGAAGGAGAGA+TGG - Chr1:5559115-5559134 None:intergenic 50.0%
TGTTGTGGTGGCCTAGAATG+TGG + Chr1:5559768-5559787 MsG0180000402.01.T01:intron 50.0%
TTGGTGGAGACACTAAGTGG+AGG + Chr1:5556429-5556448 MsG0180000402.01.T01:CDS 50.0%
TTGTCGATCCACTCTGTAGG+TGG - Chr1:5550125-5550144 None:intergenic 50.0%
! CTGCGTTTTGCGTTTGCGTT+TGG - Chr1:5558990-5559009 None:intergenic 50.0%
! GATAGGGGTGTGGAAACTTG+AGG - Chr1:5549191-5549210 None:intergenic 50.0%
! GGGCGGCCTTATATGATTGA+TGG + Chr1:5549642-5549661 MsG0180000402.01.T01:CDS 50.0%
! GTGTTGGTGGAGACACTAAG+TGG + Chr1:5556426-5556445 MsG0180000402.01.T01:CDS 50.0%
! TCCGATCAACTTGTTCCGCA+TGG + Chr1:5549133-5549152 MsG0180000402.01.T01:CDS 50.0%
!! AACACCTACCGATTCCGTGT+CGG + Chr1:5559077-5559096 MsG0180000402.01.T01:intron 50.0%
!! AGACAGACCGGGATTAGCTA+TGG - Chr1:5552198-5552217 None:intergenic 50.0%
!! AGACTGGTCTTCACTCCCAA+AGG + Chr1:5549056-5549075 MsG0180000402.01.T01:CDS 50.0%
!! ATCAACCAAGGGCGTTGAAG+TGG - Chr1:5549282-5549301 None:intergenic 50.0%
!! CAATTGTTTTCTGGTGGGGG+AGG + Chr1:5553647-5553666 MsG0180000402.01.T01:intron 50.0%
!! CCGGTGTCATTTGGTGTTGA+AGG + Chr1:5550727-5550746 MsG0180000402.01.T01:intron 50.0%
!! GAGTGCTAGTAAGGTGTTGG+TGG + Chr1:5556413-5556432 MsG0180000402.01.T01:CDS 50.0%
!! GCCATGCGGAACAAGTTGAT+CGG - Chr1:5549137-5549156 None:intergenic 50.0%
!! TAAGGAAGAAGAGCGCCATG+CGG - Chr1:5549151-5549170 None:intergenic 50.0%
AACCACCACTTCAACGCCCT+TGG + Chr1:5549274-5549293 MsG0180000402.01.T01:CDS 55.0%
AAGCTACAGACCTCATGCCC+AGG - Chr1:5561058-5561077 None:intergenic 55.0%
CAGACGTCTCCTGCTTTCAG+GGG + Chr1:5560966-5560985 MsG0180000402.01.T01:intron 55.0%
CAGCTGCATTGTGGCTGCAA+AGG + Chr1:5559907-5559926 MsG0180000402.01.T01:intron 55.0%
CATTAGTCCACCTGGGCATG+AGG + Chr1:5561045-5561064 MsG0180000402.01.T01:intron 55.0%
CGAGTTCAACGTCGAGTCGT+TGG - Chr1:5549101-5549120 None:intergenic 55.0%
CTAATCCCGGTCTGTCTCCT+AGG + Chr1:5552201-5552220 MsG0180000402.01.T01:intron 55.0%
GAGAAATAAAGAGGGCGGGG+GGG - Chr1:5552001-5552020 None:intergenic 55.0%
TGTTCTGGCCACCTACAGAG+TGG + Chr1:5550114-5550133 MsG0180000402.01.T01:CDS 55.0%
TGTTGCTGTGTATGGGGACC+AGG + Chr1:5560494-5560513 MsG0180000402.01.T01:CDS 55.0%
TTACAGAGAACGGCGGTTGC+TGG + Chr1:5559884-5559903 MsG0180000402.01.T01:intron 55.0%
! CGATTCCGTGTCGGTGGATA+TGG + Chr1:5559086-5559105 MsG0180000402.01.T01:intron 55.0%
!! AACCAAGGGCGTTGAAGTGG+TGG - Chr1:5549279-5549298 None:intergenic 55.0%
CTACAGACCTCATGCCCAGG+TGG - Chr1:5561055-5561074 None:intergenic 60.0%
GACGCAGCGGATCCGATAGA+GGG + Chr1:5556519-5556538 MsG0180000402.01.T01:CDS 60.0%
GGTTGCTGGCAGCTGCATTG+TGG + Chr1:5559898-5559917 MsG0180000402.01.T01:intron 60.0%
TCCACCGACACGGAATCGGT+AGG - Chr1:5559084-5559103 None:intergenic 60.0%
TGACGCAGCGGATCCGATAG+AGG + Chr1:5556518-5556537 MsG0180000402.01.T01:CDS 60.0%
!! ACCTACCGATTCCGTGTCGG+TGG + Chr1:5559080-5559099 MsG0180000402.01.T01:intron 60.0%
! TGAGGGCGCGTTGCTGCGAG+TGG + Chr1:5549779-5549798 MsG0180000402.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 5549045 5561181 5549045 ID=MsG0180000402.01;Name=MsG0180000402.01
Chr1 mRNA 5549045 5561181 5549045 ID=MsG0180000402.01.T01;Parent=MsG0180000402.01;Name=MsG0180000402.01.T01;_AED=0.40;_eAED=0.56;_QI=0|0|0|1|1|1|9|0|533
Chr1 exon 5549045 5550163 5549045 ID=MsG0180000402.01.T01:exon:2722;Parent=MsG0180000402.01.T01
Chr1 exon 5556351 5556663 5556351 ID=MsG0180000402.01.T01:exon:2721;Parent=MsG0180000402.01.T01
Chr1 exon 5556736 5556803 5556736 ID=MsG0180000402.01.T01:exon:2720;Parent=MsG0180000402.01.T01
Chr1 exon 5560459 5560558 5560459 ID=MsG0180000402.01.T01:exon:2719;Parent=MsG0180000402.01.T01
Chr1 exon 5561180 5561181 5561180 ID=MsG0180000402.01.T01:exon:2718;Parent=MsG0180000402.01.T01
Chr1 CDS 5549045 5550163 5549045 ID=MsG0180000402.01.T01:cds;Parent=MsG0180000402.01.T01
Chr1 CDS 5556351 5556663 5556351 ID=MsG0180000402.01.T01:cds;Parent=MsG0180000402.01.T01
Chr1 CDS 5556736 5556803 5556736 ID=MsG0180000402.01.T01:cds;Parent=MsG0180000402.01.T01
Chr1 CDS 5560459 5560558 5560459 ID=MsG0180000402.01.T01:cds;Parent=MsG0180000402.01.T01
Chr1 CDS 5561180 5561181 5561180 ID=MsG0180000402.01.T01:cds;Parent=MsG0180000402.01.T01
Gene Sequence

>MsG0180000402.01.T01

ATGGCAGAGTCAGACTGGTCTTCACTCCCAAAGGAGCTTCTACATCTGATATCCCAACGACTCGACGTTGAACTCGATCTCATTCGTTTCCGATCAACTTGTTCCGCATGGCGCTCTTCTTCCTTACCAATTCCCAATCTAACCCTCAAGTTTCCACACCCCTATCAATCTCCCATCAACAACACCACTCAATTTCACTCTCTCTCCAAACGCTCTTTCTTCCTCATCAAACCACCACTTCAACGCCCTTGGTTGATCAGAATTACTCAAAACCCTAACGGTAAAACCAAACTCTTACACCCACTCCTCTCGTATCAATCATCTCATCCTCTTCTTTTCCCTCACGCTCTCGATTTTAGTGAACTTTATGTACTTGAATTAGGAAATGATTACATTATTGACAGCGAACAAAGATTACCATATGACTATGTTTACCCTGAAAAGATCGTTGCTGTCACGTGCAAAGAAAAAAAGCCTCTTGTTATTGGCACGTTTATCTCTACCAAGAAATCAGTCTCGTTGAAAACCAACGGAGATGAATTTTGGTGTGTGATTACTGATATGTCTATGTACTTGGGAGACATCTGCGTTTTCAAAGGGCGGCCTTATATGATTGATGGAATTGGTCGGACAATTATTGTTGGACTTGGATCGCATGACTTCGATGACTGGTTTGAACCACCTAAATATGAACTTGTGGTTAATGGTGGGGGCAAAAAATTCTTAGTGGAGAGTGAGGGCGCGTTGCTGCGAGTGGACATTTATGAGTGTTTAGGTTTTGATTACTTCGGTAAGAATGTTTTAAGGATTAATGTGTTTAGGTTTGATGAGAAGGAGAGTAAATGGGTTGATTTGATGAGTTTGGGAGATAGGGTTTTGTTTTTGGGGAATGGATGTTCGTTTTCTGCTTCTGCTTCAGATTTGTGTGTTTCTAAAGGGAATTGTGTCATCTTTATTGATGTTGCATACTTCAATTTTAATTGTAAAAACATGCAATATGGGAACTGTATCTTTGACTTGGATCAAGGCAAGCTTTCACCTTTGTCTGATTGTCCGGAATATTTTAACTTGTTCTGGCCACCTACAGAGTGGATCGACAAATGCTGCATTCCTAACAGAGGGACTGATGTTGATGTGGCTGTCACTATTCAAAAGACACAAAGATCTATAGTGAATTTTAAGAGTGCTAGTAAGGTGTTGGTGGAGACACTAAGTGGAGGCCCAATTTTGCCGATATCTGATGTTCATTGGACACCTCCTTTTAGTGGTTTCTATAAGCTTAATGTTGACGCAGCGGATCCGATAGAGGGTGATAAGTGGGGTATTGGTGTTGTTGTGAGAGATTATGAAGGTGTTGTCGTTGGTGCTAGTTGTTGGCAAGTATGTTCATTACCAGATTCAGAGGTTGCAGAAGCTTTAGCTATGCGAAAGGCGTTGAATGTTCACCAACAATCTCTCAACTATGTTGGCTCTATTATTCGAGATTGTATTAGTTTAAGGGAGCATATTATCAGAACATGTCATGGTTCTGTCTCTGTTGCTGTGTATGGGGACCAGGACAAACCAGCTCTTATCACCTATCCTGATTTGGGTTTAAATTAG
Protein sequence

>MsG0180000402.01.T01

MAESDWSSLPKELLHLISQRLDVELDLIRFRSTCSAWRSSSLPIPNLTLKFPHPYQSPINNTTQFHSLSKRSFFLIKPPLQRPWLIRITQNPNGKTKLLHPLLSYQSSHPLLFPHALDFSELYVLELGNDYIIDSEQRLPYDYVYPEKIVAVTCKEKKPLVIGTFISTKKSVSLKTNGDEFWCVITDMSMYLGDICVFKGRPYMIDGIGRTIIVGLGSHDFDDWFEPPKYELVVNGGGKKFLVESEGALLRVDIYECLGFDYFGKNVLRINVFRFDEKESKWVDLMSLGDRVLFLGNGCSFSASASDLCVSKGNCVIFIDVAYFNFNCKNMQYGNCIFDLDQGKLSPLSDCPEYFNLFWPPTEWIDKCCIPNRGTDVDVAVTIQKTQRSIVNFKSASKVLVETLSGGPILPISDVHWTPPFSGFYKLNVDAADPIEGDKWGIGVVVRDYEGVVVGASCWQVCSLPDSEVAEALAMRKALNVHQQSLNYVGSIIRDCISLREHIIRTCHGSVSVAVYGDQDKPALITYPDLGLN*