Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018519.01.T01 | XP_013454799.1 | 95.455 | 198 | 8 | 1 | 1 | 198 | 1 | 197 | 1.39E-133 | 382 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018519.01.T01 | Q9C891 | 60.317 | 189 | 70 | 2 | 10 | 198 | 4 | 187 | 7.41E-79 | 236 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018519.01.T01 | A0A072USJ4 | 95.455 | 198 | 8 | 1 | 1 | 198 | 1 | 197 | 6.63e-134 | 382 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000151.01 | MsG0480018519.01 | 0.824526 | 7.694687e-54 | 6.833154e-51 |
MsG0180001712.01 | MsG0480018519.01 | 0.813235 | 2.836615e-51 | 1.842071e-48 |
MsG0180005354.01 | MsG0480018519.01 | 0.803785 | 2.953800e-49 | 1.497669e-46 |
MsG0180005730.01 | MsG0480018519.01 | 0.812049 | 5.155208e-51 | 3.243324e-48 |
MsG0280006302.01 | MsG0480018519.01 | -0.806658 | 7.390966e-50 | 4.034038e-47 |
MsG0280011163.01 | MsG0480018519.01 | 0.817468 | 3.245874e-52 | 2.365953e-49 |
MsG0280011287.01 | MsG0480018519.01 | 0.827592 | 1.436573e-54 | 1.392955e-51 |
MsG0380012184.01 | MsG0480018519.01 | 0.816276 | 6.012269e-52 | 4.241527e-49 |
MsG0380013471.01 | MsG0480018519.01 | 0.804631 | 1.968797e-49 | 1.020151e-46 |
MsG0480018519.01 | MsG0480022343.01 | 0.859897 | 3.009408e-63 | 8.074858e-60 |
MsG0480018519.01 | MsG0480022535.01 | 0.807321 | 5.350775e-50 | 2.971362e-47 |
MsG0480018519.01 | MsG0480022575.01 | 0.802096 | 6.597959e-49 | 3.203960e-46 |
MsG0480018519.01 | MsG0480023099.01 | 0.819008 | 1.455446e-52 | 1.106857e-49 |
MsG0480018519.01 | MsG0480023776.01 | 0.809962 | 1.460060e-50 | 8.692271e-48 |
MsG0480018519.01 | MsG0580024596.01 | 0.812774 | 3.579136e-51 | 2.295800e-48 |
MsG0480018519.01 | MsG0580026488.01 | -0.801111 | 1.050440e-48 | 4.975432e-46 |
MsG0480018519.01 | MsG0680031459.01 | 0.806118 | 9.607217e-50 | 5.172264e-47 |
MsG0480018519.01 | MsG0680032460.01 | -0.801257 | 9.805790e-49 | 4.661606e-46 |
MsG0480018519.01 | MsG0680032516.01 | 0.812326 | 4.485141e-51 | 2.843259e-48 |
MsG0480018519.01 | MsG0680034782.01 | 0.830050 | 3.652290e-55 | 3.804987e-52 |
MsG0480018519.01 | MsG0780038833.01 | 0.833967 | 3.932803e-56 | 4.602125e-53 |
MsG0480018519.01 | MsG0780039405.01 | 0.808368 | 3.205038e-50 | 1.829310e-47 |
MsG0480018519.01 | MsG0780039438.01 | 0.815105 | 1.095951e-51 | 7.487131e-49 |
MsG0480018519.01 | MsG0780041351.01 | 0.807022 | 6.191064e-50 | 3.411245e-47 |
MsG0480018519.01 | MsG0880042223.01 | 0.801128 | 1.042062e-48 | 4.937935e-46 |
MsG0480018519.01 | MsG0880042743.01 | 0.809290 | 2.035772e-50 | 1.190588e-47 |
MsG0480018519.01 | MsG0880042965.01 | 0.817241 | 3.652971e-52 | 2.645884e-49 |
MsG0480018519.01 | MsG0880045544.01 | 0.801589 | 8.386169e-49 | 4.020034e-46 |
MsG0480018519.01 | MsG0880045756.01 | 0.803262 | 3.790668e-49 | 1.896280e-46 |
MsG0480018519.01 | MsG0880045926.01 | 0.827695 | 1.357306e-54 | 1.320100e-51 |
MsG0380015745.01 | MsG0480018519.01 | 0.805141 | 1.540293e-49 | 8.087212e-47 |
MsG0380015934.01 | MsG0480018519.01 | 0.802721 | 4.905692e-49 | 2.420492e-46 |
MsG0380016117.01 | MsG0480018519.01 | 0.803395 | 3.558234e-49 | 1.786111e-46 |
MsG0380016182.01 | MsG0480018519.01 | 0.810313 | 1.226374e-50 | 7.368013e-48 |
MsG0380017229.01 | MsG0480018519.01 | 0.803546 | 3.310997e-49 | 1.668541e-46 |
MsG0380017322.01 | MsG0480018519.01 | 0.819444 | 1.157936e-52 | 8.912231e-50 |
MsG0380017941.01 | MsG0480018519.01 | 0.805750 | 1.148320e-49 | 6.124500e-47 |
MsG0480018251.01 | MsG0480018519.01 | 0.808790 | 2.604896e-50 | 1.503111e-47 |
MsG0280007547.01 | MsG0480018519.01 | 0.814595 | 1.422338e-51 | 9.584277e-49 |
MsG0280007691.01 | MsG0480018519.01 | 0.834446 | 2.982733e-56 | 3.540735e-53 |
MsG0280007714.01 | MsG0480018519.01 | 0.805531 | 1.276054e-49 | 6.767043e-47 |
MsG0280008295.01 | MsG0480018519.01 | 0.809256 | 2.070187e-50 | 1.209588e-47 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0480018512.01 | MsG0480018519.01 | PPI |
MsG0480021436.01 | MsG0480018519.01 | PPI |
MsG0480018518.01 | MsG0480018519.01 | PPI |
MsG0080048537.01 | MsG0480018519.01 | PPI |
MsG0080048838.01 | MsG0480018519.01 | PPI |
MsG0080048537.01 | MsG0480018519.01 | PPI |
MsG0080048537.01 | MsG0480018519.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018519.01.T01 | MTR_4g013350 | 95.455 | 198 | 8 | 1 | 1 | 198 | 1 | 197 | 1.68e-137 | 382 |
MsG0480018519.01.T01 | MTR_4g013345 | 89.617 | 183 | 18 | 1 | 16 | 198 | 15 | 196 | 7.64e-122 | 343 |
MsG0480018519.01.T01 | MTR_4g013330 | 83.152 | 184 | 29 | 1 | 17 | 198 | 16 | 199 | 6.46e-117 | 330 |
MsG0480018519.01.T01 | MTR_4g013335 | 79.293 | 198 | 39 | 1 | 1 | 198 | 1 | 196 | 5.14e-112 | 318 |
MsG0480018519.01.T01 | MTR_4g013320 | 78.261 | 184 | 38 | 1 | 17 | 198 | 16 | 199 | 1.88e-109 | 311 |
MsG0480018519.01.T01 | MTR_4g013310 | 67.000 | 200 | 61 | 3 | 1 | 198 | 1 | 197 | 3.32e-92 | 268 |
MsG0480018519.01.T01 | MTR_4g013325 | 75.622 | 201 | 44 | 3 | 1 | 198 | 1 | 199 | 5.88e-92 | 267 |
MsG0480018519.01.T01 | MTR_7g070390 | 66.495 | 194 | 61 | 3 | 6 | 198 | 2 | 192 | 2.53e-82 | 243 |
MsG0480018519.01.T01 | MTR_4g013385 | 60.317 | 189 | 69 | 3 | 10 | 198 | 8 | 190 | 4.79e-77 | 229 |
MsG0480018519.01.T01 | MTR_0433s0040 | 60.317 | 189 | 69 | 3 | 10 | 198 | 8 | 190 | 4.79e-77 | 229 |
MsG0480018519.01.T01 | MTR_4g013770 | 62.353 | 170 | 61 | 2 | 30 | 198 | 24 | 191 | 5.92e-70 | 211 |
MsG0480018519.01.T01 | MTR_1g054525 | 56.633 | 196 | 75 | 3 | 3 | 198 | 7 | 192 | 8.40e-70 | 211 |
MsG0480018519.01.T01 | MTR_4g013355 | 54.497 | 189 | 71 | 3 | 10 | 198 | 6 | 179 | 1.02e-64 | 197 |
MsG0480018519.01.T01 | MTR_4g073950 | 55.921 | 152 | 66 | 1 | 48 | 198 | 41 | 192 | 7.51e-61 | 188 |
MsG0480018519.01.T01 | MTR_7g093850 | 50.000 | 186 | 90 | 3 | 14 | 198 | 11 | 194 | 9.91e-59 | 183 |
MsG0480018519.01.T01 | MTR_7g093820 | 50.000 | 186 | 90 | 3 | 14 | 198 | 11 | 194 | 1.48e-58 | 182 |
MsG0480018519.01.T01 | MTR_7g093830 | 47.849 | 186 | 94 | 3 | 14 | 198 | 10 | 193 | 2.79e-57 | 179 |
MsG0480018519.01.T01 | MTR_7g093790 | 48.795 | 166 | 83 | 2 | 34 | 198 | 27 | 191 | 2.89e-57 | 179 |
MsG0480018519.01.T01 | MTR_7g093870 | 53.846 | 156 | 67 | 2 | 48 | 198 | 38 | 193 | 6.55e-55 | 174 |
MsG0480018519.01.T01 | MTR_3g105640 | 48.447 | 161 | 81 | 2 | 40 | 198 | 28 | 188 | 4.60e-48 | 155 |
MsG0480018519.01.T01 | MTR_1g056370 | 49.669 | 151 | 74 | 2 | 48 | 197 | 36 | 185 | 5.62e-48 | 155 |
MsG0480018519.01.T01 | MTR_3g105630 | 42.487 | 193 | 100 | 3 | 9 | 198 | 5 | 189 | 9.11e-47 | 152 |
MsG0480018519.01.T01 | MTR_4g078885 | 46.980 | 149 | 77 | 1 | 50 | 198 | 39 | 185 | 2.14e-44 | 146 |
MsG0480018519.01.T01 | MTR_3g034030 | 47.651 | 149 | 76 | 1 | 50 | 198 | 39 | 185 | 4.73e-44 | 145 |
MsG0480018519.01.T01 | MTR_5g096120 | 44.231 | 156 | 75 | 3 | 51 | 198 | 38 | 189 | 1.16e-40 | 137 |
MsG0480018519.01.T01 | MTR_4g122110 | 36.620 | 142 | 90 | 0 | 57 | 198 | 39 | 180 | 9.90e-28 | 103 |
MsG0480018519.01.T01 | MTR_4g122130 | 35.915 | 142 | 91 | 0 | 57 | 198 | 39 | 180 | 4.60e-25 | 96.7 |
MsG0480018519.01.T01 | MTR_4g049550 | 31.293 | 147 | 101 | 0 | 47 | 193 | 27 | 173 | 4.48e-18 | 78.2 |
MsG0480018519.01.T01 | MTR_4g049570 | 30.769 | 143 | 99 | 0 | 51 | 193 | 31 | 173 | 4.06e-17 | 75.9 |
MsG0480018519.01.T01 | MTR_8g099115 | 33.088 | 136 | 82 | 3 | 50 | 177 | 34 | 168 | 1.45e-15 | 72.0 |
MsG0480018519.01.T01 | MTR_8g099135 | 34.091 | 132 | 70 | 4 | 58 | 177 | 38 | 164 | 2.02e-13 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018519.01.T01 | AT1G55210 | 60.317 | 189 | 70 | 2 | 10 | 198 | 4 | 187 | 7.55e-80 | 236 |
MsG0480018519.01.T01 | AT1G55210 | 60.317 | 189 | 70 | 2 | 10 | 198 | 4 | 187 | 7.55e-80 | 236 |
MsG0480018519.01.T01 | AT1G58170 | 56.915 | 188 | 70 | 2 | 13 | 198 | 7 | 185 | 2.07e-74 | 222 |
MsG0480018519.01.T01 | AT5G49040 | 53.403 | 191 | 89 | 0 | 8 | 198 | 1 | 191 | 5.86e-74 | 221 |
MsG0480018519.01.T01 | AT3G13650 | 51.832 | 191 | 87 | 3 | 8 | 198 | 1 | 186 | 7.79e-67 | 203 |
MsG0480018519.01.T01 | AT5G49030 | 53.107 | 177 | 83 | 0 | 8 | 184 | 1 | 177 | 2.05e-58 | 197 |
MsG0480018519.01.T01 | AT1G65870 | 52.318 | 151 | 72 | 0 | 47 | 197 | 39 | 189 | 9.92e-56 | 175 |
MsG0480018519.01.T01 | AT2G21100 | 52.349 | 149 | 71 | 0 | 49 | 197 | 39 | 187 | 1.27e-54 | 172 |
MsG0480018519.01.T01 | AT2G21100 | 52.349 | 149 | 71 | 0 | 49 | 197 | 39 | 187 | 1.27e-54 | 172 |
MsG0480018519.01.T01 | AT3G13662 | 54.362 | 149 | 65 | 1 | 37 | 185 | 27 | 172 | 6.58e-53 | 167 |
MsG0480018519.01.T01 | AT3G13660 | 63.559 | 118 | 43 | 0 | 81 | 198 | 8 | 125 | 7.57e-51 | 160 |
MsG0480018519.01.T01 | AT1G22900 | 50.993 | 151 | 72 | 1 | 47 | 197 | 45 | 193 | 3.17e-50 | 161 |
MsG0480018519.01.T01 | AT5G42500 | 48.344 | 151 | 74 | 2 | 48 | 197 | 38 | 185 | 3.91e-47 | 153 |
MsG0480018519.01.T01 | AT5G42510 | 47.020 | 151 | 76 | 2 | 48 | 197 | 35 | 182 | 4.36e-46 | 150 |
MsG0480018519.01.T01 | AT4G38700 | 44.872 | 156 | 80 | 3 | 49 | 198 | 35 | 190 | 1.54e-40 | 136 |
MsG0480018519.01.T01 | AT3G58090 | 51.818 | 110 | 53 | 0 | 88 | 197 | 162 | 271 | 1.78e-37 | 131 |
MsG0480018519.01.T01 | AT2G21110 | 38.235 | 170 | 95 | 2 | 33 | 198 | 23 | 186 | 2.11e-37 | 128 |
MsG0480018519.01.T01 | AT4G11210 | 28.729 | 181 | 114 | 4 | 1 | 181 | 1 | 166 | 3.26e-16 | 73.6 |
MsG0480018519.01.T01 | AT4G23690 | 36.364 | 132 | 77 | 3 | 46 | 173 | 34 | 162 | 4.97e-16 | 73.2 |
MsG0480018519.01.T01 | AT4G11180 | 29.703 | 202 | 118 | 7 | 1 | 197 | 1 | 183 | 1.11e-11 | 61.2 |
Find 36 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTTCTGGTCCTAAAGTTAA+AGG | 0.191161 | 4:+6078349 | None:intergenic |
CATTGGATTGATTTCAAAAC+TGG | 0.225984 | 4:-6078100 | MsG0480018519.01.T01:CDS |
ATTGACAACCCTTTAACTTT+AGG | 0.265955 | 4:-6078358 | MsG0480018519.01.T01:CDS |
TTCATTGAAGGAAAGTATAA+TGG | 0.275934 | 4:-6078238 | MsG0480018519.01.T01:CDS |
CCAATAGATCGCAAGTTGTT+AGG | 0.329140 | 4:-6078520 | MsG0480018519.01.T01:CDS |
CCTAACAACTTGCGATCTAT+TGG | 0.333660 | 4:+6078520 | None:intergenic |
GTAAACTCAACCACTGCTTT+TGG | 0.339769 | 4:-6078394 | MsG0480018519.01.T01:CDS |
TAAGTCATTTCAGATTCTAT+TGG | 0.351815 | 4:-6078477 | MsG0480018519.01.T01:CDS |
GAGGAATCCTGCTATTAATA+TGG | 0.364770 | 4:-6078194 | MsG0480018519.01.T01:CDS |
ATGCCTGTTGTTGGTGGTAG+TGG | 0.375988 | 4:-6078163 | MsG0480018519.01.T01:CDS |
GAACTGAGTTCTAAACTTGT+TGG | 0.385159 | 4:-6078331 | MsG0480018519.01.T01:CDS |
GGGAGTACTCTTACTATTGT+AGG | 0.399599 | 4:-6078217 | MsG0480018519.01.T01:CDS |
GTTCTGGTCCTAAAGTTAAA+GGG | 0.426776 | 4:+6078350 | None:intergenic |
ACAAGTTTAGAACTCAGTTC+TGG | 0.427865 | 4:+6078334 | None:intergenic |
GGAACAATTGCAACCGAAGT+TGG | 0.428664 | 4:+6078430 | None:intergenic |
TCATTGAAGGAAAGTATAAT+GGG | 0.435892 | 4:-6078237 | MsG0480018519.01.T01:CDS |
ACAAAGTCATGATGAAATGT+TGG | 0.438715 | 4:+6078623 | None:intergenic |
ATCCTGCTATTAATATGGTT+AGG | 0.453886 | 4:-6078189 | MsG0480018519.01.T01:CDS |
ATGCTCAAGCTAATACTCAT+TGG | 0.456460 | 4:-6078117 | MsG0480018519.01.T01:CDS |
CAAAGTCATGATGAAATGTT+GGG | 0.470092 | 4:+6078624 | None:intergenic |
AAACTTGTTGGAAGAGCTCA+AGG | 0.479877 | 4:-6078319 | MsG0480018519.01.T01:CDS |
ATTCTATGCATCTGCATCAC+AGG | 0.484694 | 4:-6078296 | MsG0480018519.01.T01:CDS |
TCCTGCTATTAATATGGTTA+GGG | 0.491633 | 4:-6078188 | MsG0480018519.01.T01:CDS |
GTTAGGGAGATGCCTGTTGT+TGG | 0.492441 | 4:-6078172 | MsG0480018519.01.T01:CDS |
AGTCCACTACCACCAACAAC+AGG | 0.512977 | 4:+6078160 | None:intergenic |
AGGGAGATGCCTGTTGTTGG+TGG | 0.521357 | 4:-6078169 | MsG0480018519.01.T01:CDS |
GGAGTACTCTTACTATTGTA+GGG | 0.530187 | 4:-6078216 | MsG0480018519.01.T01:CDS |
TCCCTAACCATATTAATAGC+AGG | 0.536411 | 4:+6078187 | None:intergenic |
TATTGGCATGACATCTTGAG+TGG | 0.547551 | 4:-6078460 | MsG0480018519.01.T01:CDS |
TCTGCATCACAGGAAGAACT+AGG | 0.571860 | 4:-6078286 | MsG0480018519.01.T01:CDS |
GTCATGATGAAATGTTGGGA+AGG | 0.583236 | 4:+6078628 | None:intergenic |
ATTGGATTGATTTCAAAACT+GGG | 0.602248 | 4:-6078099 | MsG0480018519.01.T01:CDS |
TTGGATTGATTTCAAAACTG+GGG | 0.621102 | 4:-6078098 | MsG0480018519.01.T01:CDS |
GTGTGTTGCAAGATATGAGA+AGG | 0.624292 | 4:+6078593 | None:intergenic |
GTTGACTAAACCAAAAGCAG+TGG | 0.670239 | 4:+6078384 | None:intergenic |
GTACTCTTACTATTGTAGGG+AGG | 0.687219 | 4:-6078213 | MsG0480018519.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TAAGTCATTTCAGATTCTAT+TGG | - | Chr4:6078211-6078230 | MsG0480018519.01.T01:CDS | 25.0% |
!! | ATGAATTTTGCTTTCATTGA+AGG | - | Chr4:6078438-6078457 | MsG0480018519.01.T01:CDS | 25.0% |
!! | ATTGGATTGATTTCAAAACT+GGG | - | Chr4:6078589-6078608 | MsG0480018519.01.T01:CDS | 25.0% |
!! | TCATTGAAGGAAAGTATAAT+GGG | - | Chr4:6078451-6078470 | MsG0480018519.01.T01:CDS | 25.0% |
!! | TTCATTGAAGGAAAGTATAA+TGG | - | Chr4:6078450-6078469 | MsG0480018519.01.T01:CDS | 25.0% |
ACAAAGTCATGATGAAATGT+TGG | + | Chr4:6078068-6078087 | None:intergenic | 30.0% | |
ATCCTGCTATTAATATGGTT+AGG | - | Chr4:6078499-6078518 | MsG0480018519.01.T01:CDS | 30.0% | |
CAAAGTCATGATGAAATGTT+GGG | + | Chr4:6078067-6078086 | None:intergenic | 30.0% | |
TCCTGCTATTAATATGGTTA+GGG | - | Chr4:6078500-6078519 | MsG0480018519.01.T01:CDS | 30.0% | |
! | ATTGACAACCCTTTAACTTT+AGG | - | Chr4:6078330-6078349 | MsG0480018519.01.T01:CDS | 30.0% |
! | CATTGGATTGATTTCAAAAC+TGG | - | Chr4:6078588-6078607 | MsG0480018519.01.T01:CDS | 30.0% |
! | TTGGATTGATTTCAAAACTG+GGG | - | Chr4:6078590-6078609 | MsG0480018519.01.T01:CDS | 30.0% |
!! | GTTGAGTTTACTTTTGATGA+TGG | + | Chr4:6078285-6078304 | None:intergenic | 30.0% |
ATGCTCAAGCTAATACTCAT+TGG | - | Chr4:6078571-6078590 | MsG0480018519.01.T01:CDS | 35.0% | |
GAGGAATCCTGCTATTAATA+TGG | - | Chr4:6078494-6078513 | MsG0480018519.01.T01:CDS | 35.0% | |
GAGTGGAAAAAATCCAACTT+CGG | - | Chr4:6078245-6078264 | MsG0480018519.01.T01:CDS | 35.0% | |
GTTCTGGTCCTAAAGTTAAA+GGG | + | Chr4:6078341-6078360 | None:intergenic | 35.0% | |
TCCCTAACCATATTAATAGC+AGG | + | Chr4:6078504-6078523 | None:intergenic | 35.0% | |
! | ACAAGTTTAGAACTCAGTTC+TGG | + | Chr4:6078357-6078376 | None:intergenic | 35.0% |
! | AGTTCTGGTCCTAAAGTTAA+AGG | + | Chr4:6078342-6078361 | None:intergenic | 35.0% |
! | GGAGTACTCTTACTATTGTA+GGG | - | Chr4:6078472-6078491 | MsG0480018519.01.T01:CDS | 35.0% |
!! | GAACTGAGTTCTAAACTTGT+TGG | - | Chr4:6078357-6078376 | MsG0480018519.01.T01:CDS | 35.0% |
!!! | GAGTTTACTTTTGATGATGG+TGG | + | Chr4:6078282-6078301 | None:intergenic | 35.0% |
ATTCTATGCATCTGCATCAC+AGG | - | Chr4:6078392-6078411 | MsG0480018519.01.T01:CDS | 40.0% | |
CCAATAGATCGCAAGTTGTT+AGG | - | Chr4:6078168-6078187 | MsG0480018519.01.T01:CDS | 40.0% | |
CCTAACAACTTGCGATCTAT+TGG | + | Chr4:6078171-6078190 | None:intergenic | 40.0% | |
GTACTCTTACTATTGTAGGG+AGG | - | Chr4:6078475-6078494 | MsG0480018519.01.T01:CDS | 40.0% | |
GTCATGATGAAATGTTGGGA+AGG | + | Chr4:6078063-6078082 | None:intergenic | 40.0% | |
GTGTGTTGCAAGATATGAGA+AGG | + | Chr4:6078098-6078117 | None:intergenic | 40.0% | |
GTTGACTAAACCAAAAGCAG+TGG | + | Chr4:6078307-6078326 | None:intergenic | 40.0% | |
TATTGGCATGACATCTTGAG+TGG | - | Chr4:6078228-6078247 | MsG0480018519.01.T01:CDS | 40.0% | |
! | GTAAACTCAACCACTGCTTT+TGG | - | Chr4:6078294-6078313 | MsG0480018519.01.T01:CDS | 40.0% |
!! | AAACTTGTTGGAAGAGCTCA+AGG | - | Chr4:6078369-6078388 | MsG0480018519.01.T01:CDS | 40.0% |
!! | GGGAGTACTCTTACTATTGT+AGG | - | Chr4:6078471-6078490 | MsG0480018519.01.T01:CDS | 40.0% |
!!! | GGACTTTTCAGATTTGCTAG+AGG | - | Chr4:6078546-6078565 | MsG0480018519.01.T01:CDS | 40.0% |
GGAACAATTGCAACCGAAGT+TGG | + | Chr4:6078261-6078280 | None:intergenic | 45.0% | |
TCTGCATCACAGGAAGAACT+AGG | - | Chr4:6078402-6078421 | MsG0480018519.01.T01:CDS | 45.0% | |
AGTCCACTACCACCAACAAC+AGG | + | Chr4:6078531-6078550 | None:intergenic | 50.0% | |
GTTAGGGAGATGCCTGTTGT+TGG | - | Chr4:6078516-6078535 | MsG0480018519.01.T01:CDS | 50.0% | |
!! | ATGCCTGTTGTTGGTGGTAG+TGG | - | Chr4:6078525-6078544 | MsG0480018519.01.T01:CDS | 50.0% |
AGGGAGATGCCTGTTGTTGG+TGG | - | Chr4:6078519-6078538 | MsG0480018519.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 6078057 | 6078653 | 6078057 | ID=MsG0480018519.01;Name=MsG0480018519.01 |
Chr4 | mRNA | 6078057 | 6078653 | 6078057 | ID=MsG0480018519.01.T01;Parent=MsG0480018519.01;Name=MsG0480018519.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|198 |
Chr4 | exon | 6078057 | 6078653 | 6078057 | ID=MsG0480018519.01.T01:exon:2154;Parent=MsG0480018519.01.T01 |
Chr4 | CDS | 6078057 | 6078653 | 6078057 | ID=MsG0480018519.01.T01:cds;Parent=MsG0480018519.01.T01 |
Gene Sequence |
Protein sequence |