AlfalfaGEDB | MsG0480018513.01

M. sativa cultivar ZhongmuNo.1 / MsG0480018513.01

KEGG: -
GO: -
PFAM: PF03018

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018513.01.T01	XP_013454796.1	94.271	192	11	0	1	192	1	192	6.71E-118	353
MsG0480018513.01.T01	XP_013454796.1	71.875	160	41	1	308	467	41	196	5.01E-77	249

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018513.01.T01	Q9C523	65.584	154	51	1	314	467	34	185	7.10E-70	223

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018513.01.T01	A0A835LLU6	43.436	518	198	14	6	467	10	488	3.26e-115	357

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047797.01	MsG0480018513.01	0.823638	1.243706e-53	1.077001e-50
MsG0180000702.01	MsG0480018513.01	0.821457	3.997842e-53	3.254017e-50
MsG0180002952.01	MsG0480018513.01	0.800828	1.200041e-48	5.643200e-46
MsG0180005445.01	MsG0480018513.01	0.802517	5.404702e-49	2.652700e-46
MsG0280010698.01	MsG0480018513.01	0.822571	2.205809e-53	1.853462e-50
MsG0280011305.01	MsG0480018513.01	0.809432	1.897620e-50	1.113989e-47
MsG0380012034.01	MsG0480018513.01	0.811010	8.667989e-51	5.305962e-48
MsG0380012067.01	MsG0480018513.01	0.801881	7.302928e-49	3.527185e-46
MsG0380012460.01	MsG0480018513.01	0.802810	4.702228e-49	2.325457e-46
MsG0380013475.01	MsG0480018513.01	0.802429	5.634513e-49	2.759529e-46
MsG0380013549.01	MsG0480018513.01	0.820027	8.517761e-53	6.663937e-50
MsG0380014537.01	MsG0480018513.01	0.800996	1.108857e-48	5.237196e-46
MsG0480018512.01	MsG0480018513.01	0.822693	2.066140e-53	1.742007e-50
MsG0480018513.01	MsG0480018640.01	0.800137	1.659780e-48	7.669522e-46
MsG0480018513.01	MsG0480019603.01	0.803843	2.872929e-49	1.458874e-46
MsG0480018513.01	MsG0480020167.01	0.817566	3.085872e-52	2.255141e-49
MsG0480018513.01	MsG0480023488.01	0.820345	7.205114e-53	5.686385e-50
MsG0480018513.01	MsG0480023873.01	0.811901	5.552684e-51	3.479391e-48
MsG0480018513.01	MsG0580024157.01	0.802638	5.101652e-49	2.511780e-46
MsG0480018513.01	MsG0580024690.01	0.837737	4.357669e-57	5.713394e-54
MsG0480018513.01	MsG0580027261.01	0.812330	4.476886e-51	2.838346e-48
MsG0480018513.01	MsG0580029198.01	0.807434	5.064308e-50	2.820413e-47
MsG0480018513.01	MsG0580029926.01	0.806225	9.122348e-50	4.924765e-47
MsG0480018513.01	MsG0680030880.01	0.810236	1.274073e-50	7.639176e-48
MsG0480018513.01	MsG0680035123.01	0.810704	1.009559e-50	6.129039e-48
MsG0480018513.01	MsG0680035580.01	0.833563	4.963494e-56	5.737478e-53
MsG0480018513.01	MsG0680035692.01	0.802011	6.867608e-49	3.327669e-46
MsG0480018513.01	MsG0780036018.01	0.801753	7.761066e-49	3.735837e-46
MsG0480018513.01	MsG0780036201.01	0.818712	1.698941e-52	1.281338e-49
MsG0480018513.01	MsG0780037054.01	0.804474	2.122986e-49	1.095607e-46
MsG0480018513.01	MsG0780038401.01	0.804519	2.077865e-49	1.073538e-46
MsG0480018513.01	MsG0780038691.01	0.827614	1.419401e-54	1.377153e-51
MsG0480018513.01	MsG0780039243.01	0.837229	5.879360e-57	7.587701e-54
MsG0480018513.01	MsG0780039252.01	0.807887	4.058252e-50	2.286877e-47
MsG0480018513.01	MsG0780039443.01	0.806057	9.895933e-50	5.319444e-47
MsG0480018513.01	MsG0780040669.01	0.843187	1.635059e-58	2.537798e-55
MsG0480018513.01	MsG0780041764.01	0.837808	4.177394e-57	5.488815e-54
MsG0480018513.01	MsG0880042698.01	0.812734	3.652655e-51	2.340635e-48
MsG0480018513.01	MsG0880042939.01	0.803516	3.357914e-49	1.690874e-46
MsG0480018513.01	MsG0880043479.01	0.821181	4.628394e-53	3.738812e-50
MsG0480018513.01	MsG0880043480.01	0.822656	2.108031e-53	1.775491e-50
MsG0480018513.01	MsG0880043941.01	0.801898	7.243788e-49	3.500016e-46
MsG0480018513.01	MsG0880046027.01	0.813831	2.097634e-51	1.384476e-48
MsG0480018513.01	MsG0880046069.01	0.810350	1.203887e-50	7.240004e-48
MsG0380015039.01	MsG0480018513.01	0.808921	2.442021e-50	1.414051e-47
MsG0380015196.01	MsG0480018513.01	0.805214	1.487494e-49	7.824303e-47
MsG0380016236.01	MsG0480018513.01	0.807646	4.566068e-50	2.556934e-47
MsG0480018128.01	MsG0480018513.01	0.814974	1.172343e-51	7.980802e-49
MsG0480018251.01	MsG0480018513.01	0.801375	9.273627e-49	4.421767e-46
MsG0480018313.01	MsG0480018513.01	0.814574	1.437686e-51	9.682307e-49
MsG0280006707.01	MsG0480018513.01	0.821651	3.605865e-53	2.951131e-50
MsG0280006769.01	MsG0480018513.01	0.815071	1.115576e-51	7.614085e-49
MsG0280007529.01	MsG0480018513.01	0.829070	6.321416e-55	6.399933e-52
MsG0280007547.01	MsG0480018513.01	0.809343	1.982934e-50	1.161340e-47
MsG0280008615.01	MsG0480018513.01	0.806258	8.974935e-50	4.849307e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018513.01.T01	MTR_4g013335	94.271	192	11	0	1	192	1	192	8.12e-122	353
MsG0480018513.01.T01	MTR_4g013335	71.875	160	41	1	308	467	41	196	6.06e-81	249
MsG0480018513.01.T01	MTR_4g013330	93.750	160	10	0	308	467	40	199	1.43e-107	317
MsG0480018513.01.T01	MTR_4g013330	71.667	180	47	2	17	192	16	195	1.36e-90	274
MsG0480018513.01.T01	MTR_4g013350	76.289	194	43	2	1	192	1	193	2.41e-98	294
MsG0480018513.01.T01	MTR_4g013350	80.000	160	30	1	308	467	40	197	2.91e-91	276
MsG0480018513.01.T01	MTR_4g013345	77.095	179	38	2	16	192	15	192	1.22e-94	284
MsG0480018513.01.T01	MTR_4g013345	81.250	160	28	1	308	467	39	196	4.80e-92	278
MsG0480018513.01.T01	MTR_4g013325	81.218	197	30	4	1	192	1	195	8.90e-91	275
MsG0480018513.01.T01	MTR_4g013325	72.789	147	38	1	321	467	55	199	5.45e-75	234
MsG0480018513.01.T01	MTR_4g013320	70.000	180	50	2	17	192	16	195	7.32e-88	267
MsG0480018513.01.T01	MTR_4g013320	78.750	160	32	1	308	467	42	199	1.18e-87	266
MsG0480018513.01.T01	MTR_4g013310	64.641	181	58	3	17	193	16	194	3.04e-78	242
MsG0480018513.01.T01	MTR_4g013310	68.553	159	46	2	309	467	43	197	7.52e-72	226
MsG0480018513.01.T01	MTR_7g070390	72.078	154	40	1	314	467	42	192	1.47e-69	220
MsG0480018513.01.T01	MTR_7g070390	63.784	185	65	2	11	193	5	189	5.51e-69	218
MsG0480018513.01.T01	MTR_4g013770	61.935	155	58	1	313	467	38	191	5.44e-62	200
MsG0480018513.01.T01	MTR_4g013770	57.229	166	66	2	30	192	24	187	2.63e-56	185
MsG0480018513.01.T01	MTR_4g013385	60.131	153	58	1	315	467	41	190	7.34e-62	200
MsG0480018513.01.T01	MTR_4g013385	52.973	185	81	3	10	193	8	187	7.66e-62	200
MsG0480018513.01.T01	MTR_0433s0040	60.131	153	58	1	315	467	41	190	7.34e-62	200
MsG0480018513.01.T01	MTR_0433s0040	52.973	185	81	3	10	193	8	187	7.66e-62	200
MsG0480018513.01.T01	MTR_1g054525	52.604	192	79	3	3	192	7	188	2.72e-59	193
MsG0480018513.01.T01	MTR_1g054525	59.873	157	59	2	311	467	40	192	6.39e-59	192
MsG0480018513.01.T01	MTR_4g073950	52.941	153	71	1	315	467	41	192	9.75e-52	173
MsG0480018513.01.T01	MTR_4g073950	48.299	147	73	1	48	191	41	187	3.93e-43	151
MsG0480018513.01.T01	MTR_7g093870	52.564	156	71	1	315	467	38	193	6.56e-51	172
MsG0480018513.01.T01	MTR_7g093870	51.316	152	67	2	48	192	38	189	3.77e-47	162
MsG0480018513.01.T01	MTR_4g013355	53.548	155	60	2	313	467	37	179	1.24e-50	170
MsG0480018513.01.T01	MTR_4g013355	47.027	185	81	4	10	192	6	175	4.79e-50	169
MsG0480018513.01.T01	MTR_7g093850	50.847	177	75	5	298	467	23	194	3.95e-50	169
MsG0480018513.01.T01	MTR_7g093850	44.199	181	96	4	14	191	11	189	3.39e-45	156
MsG0480018513.01.T01	MTR_7g093820	52.795	161	68	4	310	467	39	194	5.78e-50	169
MsG0480018513.01.T01	MTR_7g093820	45.304	181	94	4	14	191	11	189	2.13e-45	157
MsG0480018513.01.T01	MTR_7g093830	51.553	161	70	4	310	467	38	193	8.20e-49	166
MsG0480018513.01.T01	MTR_7g093830	43.646	181	97	4	14	191	10	188	2.32e-44	154
MsG0480018513.01.T01	MTR_7g093790	49.686	159	76	3	310	467	36	191	9.53e-49	166
MsG0480018513.01.T01	MTR_7g093790	44.172	163	87	3	34	193	27	188	5.69e-45	155
MsG0480018513.01.T01	MTR_1g056370	49.020	153	74	2	315	466	36	185	1.01e-44	155
MsG0480018513.01.T01	MTR_1g056370	45.205	146	78	2	48	191	36	181	5.89e-36	131
MsG0480018513.01.T01	MTR_3g105640	43.275	171	95	2	298	467	19	188	4.38e-42	148
MsG0480018513.01.T01	MTR_3g105640	42.308	156	86	2	40	191	28	183	4.11e-35	129
MsG0480018513.01.T01	MTR_3g105630	43.529	170	92	2	302	467	20	189	1.38e-41	147
MsG0480018513.01.T01	MTR_3g105630	37.563	197	104	5	1	191	1	184	2.69e-34	127
MsG0480018513.01.T01	MTR_4g078885	45.395	152	79	1	316	467	38	185	9.17e-41	144
MsG0480018513.01.T01	MTR_4g078885	42.657	143	82	0	49	191	38	180	1.12e-35	130
MsG0480018513.01.T01	MTR_3g034030	45.395	152	79	1	316	467	38	185	2.91e-40	143
MsG0480018513.01.T01	MTR_3g034030	42.657	143	82	0	49	191	38	180	3.96e-35	129
MsG0480018513.01.T01	MTR_5g096120	41.667	156	81	3	318	467	38	189	5.72e-36	132
MsG0480018513.01.T01	MTR_5g096120	41.497	147	80	2	51	191	38	184	6.72e-31	118
MsG0480018513.01.T01	MTR_8g099270	65.060	83	6	2	193	275	70	129	4.29e-26	105
MsG0480018513.01.T01	MTR_1g015900	65.000	80	13	1	196	275	59	123	5.17e-26	103
MsG0480018513.01.T01	MTR_4g122130	37.681	138	82	2	57	191	39	175	1.11e-22	95.5
MsG0480018513.01.T01	MTR_4g122130	34.247	146	90	2	324	467	39	180	4.15e-21	90.9
MsG0480018513.01.T01	MTR_4g122110	37.226	137	84	1	57	191	39	175	2.66e-22	94.4
MsG0480018513.01.T01	MTR_4g122110	34.211	152	90	2	320	467	35	180	6.34e-22	93.2
MsG0480018513.01.T01	MTR_6g016695	64.179	67	9	1	209	275	10	61	6.69e-20	84.3
MsG0480018513.01.T01	MTR_8g040390	57.143	70	8	1	206	275	68	115	6.95e-18	80.5
MsG0480018513.01.T01	MTR_8g020680	52.055	73	20	1	203	275	23	80	1.08e-17	78.2
MsG0480018513.01.T01	MTR_0048s0210	79.070	43	9	0	233	275	72	114	1.31e-16	76.6
MsG0480018513.01.T01	MTR_4g049570	32.117	137	91	1	57	191	37	173	8.19e-16	75.9
MsG0480018513.01.T01	MTR_4g049570	28.966	145	101	1	318	462	31	173	2.38e-14	71.6
MsG0480018513.01.T01	MTR_4g049550	31.298	131	84	2	314	442	27	153	3.11e-15	73.9
MsG0480018513.01.T01	MTR_4g049550	28.571	147	103	1	47	191	27	173	1.39e-14	72.4
MsG0480018513.01.T01	MTR_8g099115	33.083	133	78	3	57	179	41	172	1.66e-14	72.4
MsG0480018513.01.T01	MTR_8g099115	35.659	129	76	4	324	446	41	168	1.38e-12	66.6
MsG0480018513.01.T01	MTR_8g099135	29.252	147	98	2	38	179	23	168	3.70e-12	65.5
MsG0480018513.01.T01	MTR_1g046490	36.667	90	56	1	83	172	121	209	1.07e-11	65.1
MsG0480018513.01.T01	MTR_1g046800	36.667	90	56	1	83	172	135	223	5.69e-11	63.2
MsG0480018513.01.T01	MTR_1g046500	36.667	90	56	1	83	172	135	223	6.42e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018513.01.T01	AT1G58170	65.584	154	51	1	314	467	34	185	7.24e-71	223
MsG0480018513.01.T01	AT1G58170	53.804	184	72	3	13	192	7	181	5.94e-62	200
MsG0480018513.01.T01	AT1G55210	58.470	183	73	2	10	192	4	183	1.34e-67	214
MsG0480018513.01.T01	AT1G55210	63.750	160	53	2	308	467	33	187	2.71e-67	214
MsG0480018513.01.T01	AT1G55210	58.470	183	73	2	10	192	4	183	1.34e-67	214
MsG0480018513.01.T01	AT1G55210	63.750	160	53	2	308	467	33	187	2.71e-67	214
MsG0480018513.01.T01	AT5G49040	53.646	192	81	2	3	192	2	187	3.21e-63	203
MsG0480018513.01.T01	AT5G49040	58.750	160	64	1	308	467	34	191	7.33e-61	197
MsG0480018513.01.T01	AT3G13650	52.632	190	81	4	3	192	2	182	4.24e-57	187
MsG0480018513.01.T01	AT3G13650	57.500	160	62	3	308	467	33	186	1.73e-56	186
MsG0480018513.01.T01	AT5G49030	51.256	199	87	3	3	199	2	192	4.38e-54	196
MsG0480018513.01.T01	AT5G49030	57.419	155	62	2	308	462	34	184	2.13e-47	176
MsG0480018513.01.T01	AT3G13662	57.534	146	61	1	37	182	27	171	2.58e-53	177
MsG0480018513.01.T01	AT3G13662	57.534	146	57	1	309	454	32	172	5.09e-50	168
MsG0480018513.01.T01	AT1G65870	47.712	153	78	1	314	466	39	189	8.88e-48	163
MsG0480018513.01.T01	AT1G65870	50.676	148	71	1	47	192	39	186	1.22e-44	155
MsG0480018513.01.T01	AT3G13660	61.345	119	46	0	349	467	7	125	1.99e-45	154
MsG0480018513.01.T01	AT3G13660	62.281	114	43	0	79	192	8	121	9.23e-43	147
MsG0480018513.01.T01	AT2G21100	48.344	151	76	1	316	466	39	187	5.81e-45	155
MsG0480018513.01.T01	AT2G21100	47.586	145	74	1	49	191	39	183	3.11e-41	145
MsG0480018513.01.T01	AT2G21100	48.344	151	76	1	316	466	39	187	5.81e-45	155
MsG0480018513.01.T01	AT2G21100	47.586	145	74	1	49	191	39	183	3.11e-41	145
MsG0480018513.01.T01	AT1G22900	49.020	153	74	2	314	466	45	193	8.01e-44	153
MsG0480018513.01.T01	AT1G22900	48.980	147	71	2	47	191	45	189	3.52e-40	143
MsG0480018513.01.T01	AT5G42500	47.368	152	76	3	315	466	38	185	4.71e-43	150
MsG0480018513.01.T01	AT5G42500	45.890	146	75	2	48	191	38	181	1.84e-38	138
MsG0480018513.01.T01	AT5G42510	46.405	153	76	3	315	466	35	182	1.69e-41	146
MsG0480018513.01.T01	AT5G42510	46.575	146	74	2	48	191	35	178	2.00e-39	140
MsG0480018513.01.T01	AT4G38700	41.667	156	87	2	316	467	35	190	9.71e-36	131
MsG0480018513.01.T01	AT4G38700	42.667	150	78	3	49	190	35	184	3.34e-35	130
MsG0480018513.01.T01	AT2G21110	40.506	158	86	2	315	467	32	186	2.96e-34	127
MsG0480018513.01.T01	AT2G21110	38.788	165	89	2	33	191	23	181	3.30e-32	121
MsG0480018513.01.T01	AT3G58090	50.000	110	55	0	357	466	162	271	2.00e-33	127
MsG0480018513.01.T01	AT3G58090	49.057	106	54	0	87	192	163	268	5.46e-31	120
MsG0480018513.01.T01	AT4G23690	33.333	153	88	6	306	454	29	171	1.01e-13	70.1
MsG0480018513.01.T01	AT4G23690	33.588	131	80	4	46	171	34	162	1.35e-13	69.7
MsG0480018513.01.T01	AT4G11210	27.841	176	109	3	8	179	5	166	1.21e-13	69.7
MsG0480018513.01.T01	AT4G11210	28.659	164	110	3	289	450	8	166	1.02e-11	64.3
MsG0480018513.01.T01	AT4G11190	26.230	183	114	4	1	179	1	166	2.82e-13	68.6
MsG0480018513.01.T01	AT4G11180	31.183	186	106	6	12	191	10	179	8.82e-13	67.4
MsG0480018513.01.T01	AT1G64160	30.000	130	86	2	54	179	37	165	2.34e-12	65.9

Find 119 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGGAAGTACACTTACTATTT+TGG	0.090168	4:-6015868	MsG0480018513.01.T01:CDS
AACTGTGGTCCTAAAGTTAA+AGG	0.173169	4:+6015999	None:intergenic
CCGATAGACCGCAAGTTATT+AGG	0.219308	4:-6013894	MsG0480018513.01.T01:intron
ATGGACAGCCCTTTGACTTT+AGG	0.270088	4:-6013726	MsG0480018513.01.T01:CDS
CCCTCGCGACCAACACTATT+GGG	0.273481	4:+6014757	None:intergenic
CCCCTCGCGACCAACACTAT+TGG	0.285237	4:+6014756	None:intergenic
CCATTGGGCCACCTGTTATA+AGG	0.286147	4:-6014868	MsG0480018513.01.T01:CDS
ATCAACAACCCTTTAACTTT+AGG	0.295206	4:-6016008	MsG0480018513.01.T01:CDS
CTTAGGTTCGTGGACATAAA+TGG	0.304660	4:+6014824	None:intergenic
TCAACCGGCCTTAATGCTTT+TGG	0.320368	4:-6013762	MsG0480018513.01.T01:CDS
TTTACTGAAGGAAAGTATAA+TGG	0.333494	4:-6015888	MsG0480018513.01.T01:CDS
CATTGGGTTGATCTCAAATC+TGG	0.338134	4:-6013468	MsG0480018513.01.T01:CDS
CCTAACAACTTGCGATCTAT+TGG	0.340385	4:+6016164	None:intergenic
GGTAGTACTATTACTATCTT+GGG	0.346488	4:-6013585	MsG0480018513.01.T01:CDS
TTCATTGAAGGAAAGTATAA+TGG	0.359474	4:-6013606	MsG0480018513.01.T01:CDS
TGGTAGTACTATTACTATCT+TGG	0.363892	4:-6013586	MsG0480018513.01.T01:CDS
TCTGCATCACAGGAAGAAAT+AGG	0.369275	4:-6013654	MsG0480018513.01.T01:CDS
AGATGAAGTTGATTTGCTTA+TGG	0.369472	4:-6015925	MsG0480018513.01.T01:CDS
CAATTGAGTTCCAAACTTGT+TGG	0.370040	4:-6013699	MsG0480018513.01.T01:CDS
CAAAGTGATGAGGAAATGTT+TGG	0.371335	4:+6016268	None:intergenic
GTTTGGTTCGTGGACATAAA+TGG	0.373453	4:+6014779	None:intergenic
ATGCCTGTTGTTGGTGGTAG+TGG	0.375988	4:-6013531	MsG0480018513.01.T01:CDS
GGACTAAACCAAAAGCATTA+AGG	0.382332	4:+6013754	None:intergenic
CCAATAGATCGCAAGTTGTT+AGG	0.388446	4:-6016164	MsG0480018513.01.T01:CDS
TTAAACTCTACCACTGCCTT+TGG	0.391230	4:-6016044	MsG0480018513.01.T01:CDS
TGAACAATTGTAATTGTTGT+AGG	0.399219	4:+6013804	None:intergenic
GCGACCAACACTATTGGGTT+TGG	0.412302	4:+6014762	None:intergenic
GGAATAACTATGATAGAAGT+AGG	0.416983	4:+6016074	None:intergenic
ACACTATTGGGTTTGGTTCG+TGG	0.421960	4:+6014769	None:intergenic
ATACCTGTTGTTGGTGGTAG+TGG	0.427470	4:-6015813	MsG0480018513.01.T01:CDS
ACTGTGGTCCTAAAGTTAAA+GGG	0.432091	4:+6016000	None:intergenic
TGTGTGGGAGGGTGCGAAAT+CGG	0.434423	4:+6014622	None:intergenic
ATGCTCAAGCTAGTACTCAT+TGG	0.446414	4:-6013485	MsG0480018513.01.T01:CDS
GAACCTAAGGTTTCCACTAT+CGG	0.457763	4:-6014810	MsG0480018513.01.T01:CDS
CCCAATAGTGTTGGTCGCGA+GGG	0.459397	4:-6014757	MsG0480018513.01.T01:CDS
ATCATGCTCTTGATAAGGTT+AGG	0.460618	4:-6013557	MsG0480018513.01.T01:CDS
CAGTTGAATTCTAAGATTGT+TGG	0.460772	4:-6015981	MsG0480018513.01.T01:CDS
CCACTTATAAACACATTGTC+AGG	0.461508	4:+6014699	None:intergenic
AATGGTGAGTGGCCCGATAG+TGG	0.462072	4:+6014797	None:intergenic
CCATTGAAACTACACTCAAC+CGG	0.462163	4:-6013777	MsG0480018513.01.T01:CDS
TGCTCAAGCTAGTACTCATT+GGG	0.464742	4:-6013484	MsG0480018513.01.T01:CDS
CCGGTTGAGTGTAGTTTCAA+TGG	0.466931	4:+6013777	None:intergenic
GATAGCGGAAACCTTATAAC+AGG	0.469488	4:+6014857	None:intergenic
AACCTAAGGTTTCCACTATC+GGG	0.472491	4:-6014809	MsG0480018513.01.T01:CDS
CTAACACAACCCCACAAAAC+CGG	0.476330	4:+6014660	None:intergenic
CGTACCAGTAGAATCTGAAA+TGG	0.477796	4:+6013847	None:intergenic
TTTCTATGCATCTGCATCAC+AGG	0.485104	4:-6013664	MsG0480018513.01.T01:CDS
AGAGCATCTTCAAGATCCAT+TGG	0.497824	4:-6014884	MsG0480018513.01.T01:CDS
CATTTATGTCCACGAACCTA+AGG	0.499601	4:-6014823	MsG0480018513.01.T01:CDS
AAGATTGTTGGAAAAGCTCA+AGG	0.501113	4:-6015969	MsG0480018513.01.T01:CDS
GAACAATTGTAATTGTTGTA+GGG	0.501870	4:+6013805	None:intergenic
ATTGGGTTGATCTCAAATCT+GGG	0.503082	4:-6013467	MsG0480018513.01.T01:CDS
GTTAGGGAGATGCCTGTTGT+TGG	0.505285	4:-6013540	MsG0480018513.01.T01:CDS
AGTCCACTACCACCAACAAC+AGG	0.512977	4:+6013528	None:intergenic
TCATGCTCTTGATAAGGTTA+GGG	0.514769	4:-6013556	MsG0480018513.01.T01:CDS
AAACTTGTTGGAAAAGCTCA+AGG	0.519817	4:-6013687	MsG0480018513.01.T01:CDS
AGGGAGATGCCTGTTGTTGG+TGG	0.521357	4:-6013537	MsG0480018513.01.T01:CDS
AGTCCACTACCACCAACAAC+AGG	0.521446	4:+6015810	None:intergenic
GAGGAATCATGCTCTTGATA+AGG	0.521522	4:-6013562	MsG0480018513.01.T01:CDS
CCCCACAAAACCGGCTTGTG+AGG	0.524062	4:+6014669	None:intergenic
CGAAATCGGAAATCGTGGTT+GGG	0.526223	4:+6014636	None:intergenic
AATTGCGGTCCTAAAGTCAA+AGG	0.528813	4:+6013717	None:intergenic
TAAGCCATTTCAGATTCTAC+TGG	0.530763	4:-6013851	MsG0480018513.01.T01:CDS
GTTAGAGAGATACCTGTTGT+TGG	0.532991	4:-6015822	MsG0480018513.01.T01:CDS
AGAGTGTGTTGCAAGATATG+AGG	0.539071	4:+6016234	None:intergenic
CCTTATAACAGGTGGCCCAA+TGG	0.540694	4:+6014868	None:intergenic
GTGGTAGAGTTTAATGATGG+TGG	0.541569	4:+6016053	None:intergenic
GCGAAATCGGAAATCGTGGT+TGG	0.543436	4:+6014635	None:intergenic
CTGCTCAATCTTGTGTGGGA+GGG	0.544161	4:+6014611	None:intergenic
TAGTGGAAACCTTAGGTTCG+TGG	0.548497	4:+6014814	None:intergenic
GGCGTCTGCTCAATCTTGTG+TGG	0.548733	4:+6014606	None:intergenic
GTTATTAGGCCTAAACAAGA+AGG	0.549483	4:-6013880	MsG0480018513.01.T01:CDS
GCGTCTGCTCAATCTTGTGT+GGG	0.549501	4:+6014607	None:intergenic
CCTGACAATGTGTTTATAAG+TGG	0.550236	4:-6014699	MsG0480018513.01.T01:CDS
TGTTTAGGCCTAATAACTTG+CGG	0.555867	4:+6013886	None:intergenic
GAGCATCTTCAAGATCCATT+GGG	0.557589	4:-6014883	MsG0480018513.01.T01:CDS
TATTGGCATGGCATAGTGAG+TGG	0.558746	4:-6016104	MsG0480018513.01.T01:CDS
ACCCAATAGTGTTGGTCGCG+AGG	0.559242	4:-6014758	MsG0480018513.01.T01:CDS
GGCCCGATAGTGGAAACCTT+AGG	0.561793	4:+6014807	None:intergenic
ATTGCGGTCCTAAAGTCAAA+GGG	0.563989	4:+6013718	None:intergenic
AGAGAGATACCTGTTGTTGG+TGG	0.564352	4:-6015819	MsG0480018513.01.T01:CDS
TCTGCTCAATCTTGTGTGGG+AGG	0.570357	4:+6014610	None:intergenic
GGAAGAAGAACAAAGTGATG+AGG	0.576295	4:+6016258	None:intergenic
GGCCATCTCCTATCCGATGT+GGG	0.577900	4:+6014720	None:intergenic
TACTGGTACGACATACTAAG+TGG	0.577986	4:-6013834	MsG0480018513.01.T01:CDS
GTCCCACATCGGATAGGAGA+TGG	0.579039	4:-6014722	MsG0480018513.01.T01:CDS
AGGCCATCTCCTATCCGATG+TGG	0.581821	4:+6014719	None:intergenic
TTCGATTGATCTCAAATCTG+AGG	0.584967	4:-6015748	MsG0480018513.01.T01:CDS
GAATAACTATGATAGAAGTA+GGG	0.585056	4:+6016075	None:intergenic
GTGTGTTGCAAGATATGAGG+AGG	0.585643	4:+6016237	None:intergenic
GTGATGAGGAAATGTTTGGA+AGG	0.586936	4:+6016272	None:intergenic
GTTGTTAGGCCTAAACAAGA+AGG	0.591926	4:-6016150	MsG0480018513.01.T01:CDS
AGGTTCGTGGACATAAATGG+TGG	0.592746	4:+6014827	None:intergenic
TTAAGAGTCCCACATCGGAT+AGG	0.603528	4:-6014728	MsG0480018513.01.T01:CDS
GCGGACTGAACCAAAGGCAG+TGG	0.603551	4:+6016034	None:intergenic
GCAGTGGTAGAGTTTAATGA+TGG	0.613743	4:+6016050	None:intergenic
AATGGTGGGTGGCTCGATAG+CGG	0.616891	4:+6014842	None:intergenic
TAAACCAAAAGCATTAAGGC+CGG	0.621311	4:+6013758	None:intergenic
TTAAAGGGTTGTTGATCATG+CGG	0.621737	4:+6016015	None:intergenic
GATCATGCGGACTGAACCAA+AGG	0.627284	4:+6016028	None:intergenic
AGCGGAAACCTTATAACAGG+TGG	0.628509	4:+6014860	None:intergenic
GACAATGTGTTTATAAGTGG+GGG	0.629313	4:-6014696	MsG0480018513.01.T01:CDS
GGGTGCGAAATCGGAAATCG+TGG	0.632044	4:+6014631	None:intergenic
CTGACAATGTGTTTATAAGT+GGG	0.635125	4:-6014698	MsG0480018513.01.T01:CDS
CCAATAGTGTTGGTCGCGAG+GGG	0.636602	4:-6014756	MsG0480018513.01.T01:CDS
TGACAATGTGTTTATAAGTG+GGG	0.637639	4:-6014697	MsG0480018513.01.T01:CDS
ACAAGTTTGGAACTCAATTG+CGG	0.641411	4:+6013702	None:intergenic
CGAACCAAACCCAATAGTGT+TGG	0.643660	4:-6014766	MsG0480018513.01.T01:CDS
AGATTGTTGGAAAAGCTCAA+GGG	0.648311	4:-6015968	MsG0480018513.01.T01:CDS
GTTGAGTGTAGTTTCAATGG+TGG	0.649150	4:+6013780	None:intergenic
TTGGGTTGATCTCAAATCTG+GGG	0.653245	4:-6013466	MsG0480018513.01.T01:CDS
GGTTCGTGGACATAAATGGT+GGG	0.660466	4:+6014828	None:intergenic
TCAAAGGGCTGTCCATCATG+CGG	0.670156	4:+6013733	None:intergenic
TCGTGGACATAAATGGTGGG+TGG	0.671242	4:+6014831	None:intergenic
GTACTATTACTATCTTGGGG+AGG	0.673978	4:-6013581	MsG0480018513.01.T01:CDS
GTAGTACTATTACTATCTTG+GGG	0.684734	4:-6013584	MsG0480018513.01.T01:CDS
TTGTGTTAAGAGTCCCACAT+CGG	0.694093	4:-6014733	MsG0480018513.01.T01:CDS
TCGTGGACATAAATGGTGAG+TGG	0.697899	4:+6014786	None:intergenic
ACAATCTTAGAATTCAACTG+TGG	0.718096	4:+6015984	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAAATCATTTCAAATTTTAT+TGG	-	Chr4:6013579-6013598	MsG0480018513.01.T01:CDS	10.0%
!!	AAAATGTATAAATGATATAC+CGG	-	Chr4:6015341-6015360	MsG0480018513.01.T01:intron	15.0%
!!!	GATGTAATTTATTAGTTTAA+TGG	-	Chr4:6014151-6014170	MsG0480018513.01.T01:intron	15.0%
!!	AAATTGTTTAGAAGGTAAAA+TGG	-	Chr4:6014180-6014199	MsG0480018513.01.T01:intron	20.0%
!!	AATAGGAATAGTATATCATT+TGG	+	Chr4:6015208-6015227	None:intergenic	20.0%
!!	ACAGAGAGAATATTTATTAT+TGG	+	Chr4:6015276-6015295	None:intergenic	20.0%
!!	ATATAATAAAACTATACTGC+CGG	+	Chr4:6015468-6015487	None:intergenic	20.0%
!!!	ACAACAACAAACTTATTTTT+TGG	+	Chr4:6014043-6014062	None:intergenic	20.0%
!!!	AGTTTTCTTAATCATAACAA+CGG	+	Chr4:6015248-6015267	None:intergenic	20.0%
!!!	TATATTTTTGATCCATAATC+TGG	-	Chr4:6015430-6015449	MsG0480018513.01.T01:intron	20.0%
!!!	TTTTTTTAATCTGTGTGAAA+TGG	+	Chr4:6015322-6015341	None:intergenic	20.0%
!	AATGTTTGGAAGACATAATT+TGG	+	Chr4:6015685-6015704	None:intergenic	25.0%
!	AGTGAAAGAAAAAAGACAAA+TGG	+	Chr4:6015583-6015602	None:intergenic	25.0%
!	GAACAATTGTAATTGTTGTA+GGG	+	Chr4:6015898-6015917	None:intergenic	25.0%
!	GAATAACTATGATAGAAGTA+GGG	+	Chr4:6013628-6013647	None:intergenic	25.0%
!	GGTGAAAAAAATTGTTTAGA+AGG	-	Chr4:6014172-6014191	MsG0480018513.01.T01:intron	25.0%
!	TGAACAATTGTAATTGTTGT+AGG	+	Chr4:6015899-6015918	None:intergenic	25.0%
!!	AAGACCAAATTAATTTGGTA+AGG	-	Chr4:6014504-6014523	MsG0480018513.01.T01:intron	25.0%
!!	ATGAATTTTGCTTTCATTGA+AGG	-	Chr4:6016082-6016101	MsG0480018513.01.T01:CDS	25.0%
!!	CAAATTAATTTGGTCTTCAA+CGG	+	Chr4:6014501-6014520	None:intergenic	25.0%
!!	CATTTCAAATTTTATTGGCA+TGG	-	Chr4:6013584-6013603	MsG0480018513.01.T01:CDS	25.0%
!!	GTTTTCTTAATCATAACAAC+GGG	+	Chr4:6015247-6015266	None:intergenic	25.0%
!!	TTCATTGAAGGAAAGTATAA+TGG	-	Chr4:6016094-6016113	MsG0480018513.01.T01:CDS	25.0%
!!	TTTACTGAAGGAAAGTATAA+TGG	-	Chr4:6013812-6013831	MsG0480018513.01.T01:CDS	25.0%
!!!	ATGAATTTTGCTTTTACTGA+AGG	-	Chr4:6013800-6013819	MsG0480018513.01.T01:CDS	25.0%
!!!	CAACAAACTTATTTTTTGGA+CGG	+	Chr4:6014039-6014058	None:intergenic	25.0%
!!!	TTAGTTTTTCCTTCTTGTTT+AGG	+	Chr4:6015832-6015851	None:intergenic	25.0%
	AAGAAAAAAGACAAATGGAG+TGG	+	Chr4:6015578-6015597	None:intergenic	30.0%
	AAGGCCTTACCAAATTAATT+TGG	+	Chr4:6014511-6014530	None:intergenic	30.0%
	AAGTGAACTGAAATATGGTA+AGG	-	Chr4:6014566-6014585	MsG0480018513.01.T01:intron	30.0%
	ACAATCTTAGAATTCAACTG+TGG	+	Chr4:6013719-6013738	None:intergenic	30.0%
	AGAAAAAAGACAAATGGAGT+GGG	+	Chr4:6015577-6015596	None:intergenic	30.0%
	AGTGAACGGAATATTAAAAG+AGG	+	Chr4:6015608-6015627	None:intergenic	30.0%
	ATTTACAATGGACCAGATTA+TGG	+	Chr4:6015445-6015464	None:intergenic	30.0%
	CCATTTGCTTGACAAAATTA+AGG	+	Chr4:6014417-6014436	None:intergenic	30.0%
	CGTTGAAGACCAAATTAATT+TGG	-	Chr4:6014499-6014518	MsG0480018513.01.T01:intron	30.0%
	CTGACAATGTGTTTATAAGT+GGG	-	Chr4:6014722-6014741	MsG0480018513.01.T01:CDS	30.0%
	GACATCTCTAAATACAAACA+AGG	+	Chr4:6014530-6014549	None:intergenic	30.0%
	GAGTTAAGTGAACTGAAATA+TGG	-	Chr4:6014561-6014580	MsG0480018513.01.T01:intron	30.0%
	GGAATAACTATGATAGAAGT+AGG	+	Chr4:6013629-6013648	None:intergenic	30.0%
	GGTAGTACTATTACTATCTT+GGG	-	Chr4:6016115-6016134	MsG0480018513.01.T01:CDS	30.0%
	GTAGTACTATTACTATCTTG+GGG	-	Chr4:6016116-6016135	MsG0480018513.01.T01:CDS	30.0%
	TGACAATGTGTTTATAAGTG+GGG	-	Chr4:6014723-6014742	MsG0480018513.01.T01:CDS	30.0%
	TGATACCATCTTAAAAATCG+TGG	+	Chr4:6014797-6014816	None:intergenic	30.0%
	TGGTAGTACTATTACTATCT+TGG	-	Chr4:6016114-6016133	MsG0480018513.01.T01:CDS	30.0%
	TGTATAAATGATATACCGGA+TGG	-	Chr4:6015345-6015364	MsG0480018513.01.T01:intron	30.0%
!	ATCAACAACCCTTTAACTTT+AGG	-	Chr4:6013692-6013711	MsG0480018513.01.T01:CDS	30.0%
!	CCTTAATTTTGTCAAGCAAA+TGG	-	Chr4:6014414-6014433	MsG0480018513.01.T01:intron	30.0%
!	GAAAAAGCATATAGAGGAAT+AGG	+	Chr4:6015225-6015244	None:intergenic	30.0%
!	TAATTTTGTCAAGCAAATGG+TGG	-	Chr4:6014417-6014436	MsG0480018513.01.T01:intron	30.0%
!	TCAATTGACTCAGTTAAACT+GGG	+	Chr4:6015299-6015318	None:intergenic	30.0%
!	TTTTCATCAAGTTTGGATTG+TGG	+	Chr4:6014624-6014643	None:intergenic	30.0%
!!	AGATGAAGTTGATTTGCTTA+TGG	-	Chr4:6013775-6013794	MsG0480018513.01.T01:CDS	30.0%
!!	CAGTTGAATTCTAAGATTGT+TGG	-	Chr4:6013719-6013738	MsG0480018513.01.T01:CDS	30.0%
!!	GGAAGTACACTTACTATTTT+GGG	-	Chr4:6013833-6013852	MsG0480018513.01.T01:CDS	30.0%
!!	TGGAAGTACACTTACTATTT+TGG	-	Chr4:6013832-6013851	MsG0480018513.01.T01:CDS	30.0%
!!	TTAGCTTTTCCTTCTTGTTT+AGG	+	Chr4:6013562-6013581	None:intergenic	30.0%
	AACTGTGGTCCTAAAGTTAA+AGG	+	Chr4:6013704-6013723	None:intergenic	35.0%
	AACTTTACTTTCTCCGCATA+AGG	-	Chr4:6014221-6014240	MsG0480018513.01.T01:intron	35.0%
	AAGATTGTTGGAAAAGCTCA+AGG	-	Chr4:6013731-6013750	MsG0480018513.01.T01:CDS	35.0%
	AATCTGGTCCATTGTAAATC+CGG	-	Chr4:6015446-6015465	MsG0480018513.01.T01:intron	35.0%
	ACCATCTTAAAAATCGTGGT+TGG	+	Chr4:6014793-6014812	None:intergenic	35.0%
	ACTGTGGTCCTAAAGTTAAA+GGG	+	Chr4:6013703-6013722	None:intergenic	35.0%
	AGATTGTTGGAAAAGCTCAA+GGG	-	Chr4:6013732-6013751	MsG0480018513.01.T01:CDS	35.0%
	AGTAGAAGGAAGAAGAACAA+AGG	+	Chr4:6015713-6015732	None:intergenic	35.0%
	ATAAATGATATACCGGATGG+AGG	-	Chr4:6015348-6015367	MsG0480018513.01.T01:intron	35.0%
	ATCATGCTCTTGATAAGGTT+AGG	-	Chr4:6016143-6016162	MsG0480018513.01.T01:CDS	35.0%
	ATTGTGGTTTCTTCTTAGCT+AGG	+	Chr4:6014608-6014627	None:intergenic	35.0%
	CAAAGTGATGAGGAAATGTT+TGG	+	Chr4:6013435-6013454	None:intergenic	35.0%
	CAATTGAGTTCCAAACTTGT+TGG	-	Chr4:6016001-6016020	MsG0480018513.01.T01:CDS	35.0%
	CACTATTAAGAATCCCACAT+CGG	-	Chr4:6014687-6014706	MsG0480018513.01.T01:CDS	35.0%
	CCACTTATAAACACATTGTC+AGG	+	Chr4:6014724-6014743	None:intergenic	35.0%
	CCATCTTAAAAATCGTGGTT+GGG	+	Chr4:6014792-6014811	None:intergenic	35.0%
	CCTGACAATGTGTTTATAAG+TGG	-	Chr4:6014721-6014740	MsG0480018513.01.T01:CDS	35.0%
	GACAATGTGTTTATAAGTGG+GGG	-	Chr4:6014724-6014743	MsG0480018513.01.T01:CDS	35.0%
	GTAGAAGGAAGAAGAACAAA+GGG	+	Chr4:6015712-6015731	None:intergenic	35.0%
	GTTATTAGGCCTAAACAAGA+AGG	-	Chr4:6015820-6015839	MsG0480018513.01.T01:CDS	35.0%
	GTTTGGAAGACATAATTTGG+TGG	+	Chr4:6015682-6015701	None:intergenic	35.0%
	TAAATGATATACCGGATGGA+GGG	-	Chr4:6015349-6015368	MsG0480018513.01.T01:intron	35.0%
	TAAGCCATTTCAGATTCTAC+TGG	-	Chr4:6015849-6015868	MsG0480018513.01.T01:CDS	35.0%
	TCAGTTCACTTAACTCAGTT+TGG	+	Chr4:6014557-6014576	None:intergenic	35.0%
	TCATGCTCTTGATAAGGTTA+GGG	-	Chr4:6016144-6016163	MsG0480018513.01.T01:CDS	35.0%
	TGTTTAGGCCTAATAACTTG+CGG	+	Chr4:6015817-6015836	None:intergenic	35.0%
	TTAAAGGGTTGTTGATCATG+CGG	+	Chr4:6013688-6013707	None:intergenic	35.0%
	TTAAGGTGCAATCCTATGAT+TGG	+	Chr4:6014400-6014419	None:intergenic	35.0%
	TTCGATTGATCTCAAATCTG+AGG	-	Chr4:6013952-6013971	MsG0480018513.01.T01:intron	35.0%
!	ACAAGTTTGGAACTCAATTG+CGG	+	Chr4:6016001-6016020	None:intergenic	35.0%
!	GACTTTTCAGATTTGCAAGA+GGG	-	Chr4:6013909-6013928	MsG0480018513.01.T01:intron	35.0%
!	GCGACTATTTTCATCAAGTT+TGG	+	Chr4:6014631-6014650	None:intergenic	35.0%
!	GTCAATTGACTCAGTTAAAC+TGG	+	Chr4:6015300-6015319	None:intergenic	35.0%
!	TATCATTTGGTTCCATTCCA+TGG	+	Chr4:6015195-6015214	None:intergenic	35.0%
!	TTGAGCTTTTCCAACAAGTT+TGG	+	Chr4:6016014-6016033	None:intergenic	35.0%
!!	AAACTTGTTGGAAAAGCTCA+AGG	-	Chr4:6016013-6016032	MsG0480018513.01.T01:CDS	35.0%
!!	ATGATGATGAAGTTGATGTG+AGG	+	Chr4:6015748-6015767	None:intergenic	35.0%
!!	ATTGGGTTGATCTCAAATCT+GGG	-	Chr4:6016233-6016252	MsG0480018513.01.T01:CDS	35.0%
!!	CTTCAACGGTTTGAGTTTTA+TGG	+	Chr4:6014487-6014506	None:intergenic	35.0%
!!	GGACTAAACCAAAAGCATTA+AGG	+	Chr4:6015949-6015968	None:intergenic	35.0%
!!	GTACACTTACTATTTTGGGA+AGG	-	Chr4:6013837-6013856	MsG0480018513.01.T01:CDS	35.0%
!!	TAAACCAAAAGCATTAAGGC+CGG	+	Chr4:6015945-6015964	None:intergenic	35.0%
!!	TGATGATGAAGTTGATGTGA+GGG	+	Chr4:6015747-6015766	None:intergenic	35.0%
!!!	GACTTTTCAGATTTGCTAGA+GGG	-	Chr4:6016191-6016210	MsG0480018513.01.T01:CDS	35.0%
!!!	TTGTTTTTAACCACCACATG+TGG	+	Chr4:6014355-6014374	None:intergenic	35.0%
	AACCTAAGGTTTCCACTATC+GGG	-	Chr4:6014891-6014910	MsG0480018513.01.T01:CDS	40.0%
	AATTGCGGTCCTAAAGTCAA+AGG	+	Chr4:6015986-6016005	None:intergenic	40.0%
	AGAGTGTGTTGCAAGATATG+AGG	+	Chr4:6013469-6013488	None:intergenic	40.0%
	ATGCTCAAGCTAGTACTCAT+TGG	-	Chr4:6016215-6016234	MsG0480018513.01.T01:CDS	40.0%
	ATTGCGGTCCTAAAGTCAAA+GGG	+	Chr4:6015985-6016004	None:intergenic	40.0%
	CATTTATGTCCACGAACCTA+AGG	-	Chr4:6014877-6014896	MsG0480018513.01.T01:CDS	40.0%
	CCAATAGATCGCAAGTTGTT+AGG	-	Chr4:6013536-6013555	MsG0480018513.01.T01:CDS	40.0%
	CCATTGAAACTACACTCAAC+CGG	-	Chr4:6015923-6015942	MsG0480018513.01.T01:CDS	40.0%
	CCTAACAACTTGCGATCTAT+TGG	+	Chr4:6013539-6013558	None:intergenic	40.0%
	CGATGTGGGATTCTTAATAG+TGG	+	Chr4:6014689-6014708	None:intergenic	40.0%
	CGTACCAGTAGAATCTGAAA+TGG	+	Chr4:6015856-6015875	None:intergenic	40.0%
	CTATACTGCCGGATTTACAA+TGG	+	Chr4:6015457-6015476	None:intergenic	40.0%
	CTTAGGTTCGTGGACATAAA+TGG	+	Chr4:6014879-6014898	None:intergenic	40.0%
	CTTCGCTTTCAACCAATCAT+AGG	-	Chr4:6014385-6014404	MsG0480018513.01.T01:intron	40.0%
	GAACAAAGGGAGGAAATGTT+TGG	+	Chr4:6015699-6015718	None:intergenic	40.0%
	GAACCTAAGGTTTCCACTAT+CGG	-	Chr4:6014890-6014909	MsG0480018513.01.T01:CDS	40.0%
	GAGCATCTTCAAGATCCATT+GGG	-	Chr4:6014817-6014836	MsG0480018513.01.T01:CDS	40.0%
	GAGGAATCATGCTCTTGATA+AGG	-	Chr4:6016138-6016157	MsG0480018513.01.T01:CDS	40.0%
	GCAGTGGTAGAGTTTAATGA+TGG	+	Chr4:6013653-6013672	None:intergenic	40.0%
	GCGGAGAAAGTAAAGTTGTT+TGG	+	Chr4:6014218-6014237	None:intergenic	40.0%
	GGAAGAAGAACAAAGTGATG+AGG	+	Chr4:6013445-6013464	None:intergenic	40.0%
	GTACTATTACTATCTTGGGG+AGG	-	Chr4:6016119-6016138	MsG0480018513.01.T01:CDS	40.0%
	GTGATGAGGAAATGTTTGGA+AGG	+	Chr4:6013431-6013450	None:intergenic	40.0%
	GTGGTAGAGTTTAATGATGG+TGG	+	Chr4:6013650-6013669	None:intergenic	40.0%
	GTTAGAGAGATACCTGTTGT+TGG	-	Chr4:6013878-6013897	MsG0480018513.01.T01:CDS	40.0%
	GTTCACTTAACTCAGTTTGG+CGG	+	Chr4:6014554-6014573	None:intergenic	40.0%
	GTTGAGTGTAGTTTCAATGG+TGG	+	Chr4:6015923-6015942	None:intergenic	40.0%
	GTTGTTAGGCCTAAACAAGA+AGG	-	Chr4:6013550-6013569	MsG0480018513.01.T01:CDS	40.0%
	TACTGGTACGACATACTAAG+TGG	-	Chr4:6015866-6015885	MsG0480018513.01.T01:CDS	40.0%
	TAGTGAAGTGACGAAGTGAA+CGG	+	Chr4:6015622-6015641	None:intergenic	40.0%
	TAGTGGTAAGTTAGAAGACG+CGG	+	Chr4:6014672-6014691	None:intergenic	40.0%
	TCACTAAAATGACGCAACCA+TGG	-	Chr4:6015136-6015155	MsG0480018513.01.T01:intron	40.0%
	TCTCTTAAGCACTCCTTATG+CGG	+	Chr4:6014237-6014256	None:intergenic	40.0%
	TCTGCATCACAGGAAGAAAT+AGG	-	Chr4:6016046-6016065	MsG0480018513.01.T01:CDS	40.0%
	TGCTCAAGCTAGTACTCATT+GGG	-	Chr4:6016216-6016235	MsG0480018513.01.T01:CDS	40.0%
	TTAAACTCTACCACTGCCTT+TGG	-	Chr4:6013656-6013675	MsG0480018513.01.T01:CDS	40.0%
	TTAAGAATCCCACATCGGAT+AGG	-	Chr4:6014692-6014711	MsG0480018513.01.T01:CDS	40.0%
	TTGTGTTAAGAGTCCCACAT+CGG	-	Chr4:6014967-6014986	MsG0480018513.01.T01:intron	40.0%
	TTTCTATGCATCTGCATCAC+AGG	-	Chr4:6016036-6016055	MsG0480018513.01.T01:CDS	40.0%
!	AGAGCATCTTCAAGATCCAT+TGG	-	Chr4:6014816-6014835	MsG0480018513.01.T01:CDS	40.0%
!	ATTTTTGTACTCCCTCCATC+CGG	+	Chr4:6015363-6015382	None:intergenic	40.0%
!	CAACGGGAAAAAGCATATAG+AGG	+	Chr4:6015231-6015250	None:intergenic	40.0%
!	CCTAATAACTTGCGGTCTAT+CGG	+	Chr4:6015809-6015828	None:intergenic	40.0%
!	GACTCACATGCATCATTTTG+TGG	+	Chr4:6015118-6015137	None:intergenic	40.0%
!	GGACTTTTCAGATTTGCAAG+AGG	-	Chr4:6013908-6013927	MsG0480018513.01.T01:intron	40.0%
!	GTTTGGTTCGTGGACATAAA+TGG	+	Chr4:6014924-6014943	None:intergenic	40.0%
!	TTTTTAACCACCACATGTGG+TGG	+	Chr4:6014352-6014371	None:intergenic	40.0%
!!	CATTGGGTTGATCTCAAATC+TGG	-	Chr4:6016232-6016251	MsG0480018513.01.T01:CDS	40.0%
!!	CCCAACCACGATTTTTAAGA+TGG	-	Chr4:6014789-6014808	MsG0480018513.01.T01:CDS	40.0%
!!	GATAGCGGAAACCTTATAAC+AGG	+	Chr4:6014846-6014865	None:intergenic	40.0%
!!	TTGGGTTGATCTCAAATCTG+GGG	-	Chr4:6016234-6016253	MsG0480018513.01.T01:CDS	40.0%
!!!	GGACTTTTCAGATTTGCTAG+AGG	-	Chr4:6016190-6016209	MsG0480018513.01.T01:CDS	40.0%
!!!	TTTTGGTTTAGTCCGCATGA+TGG	-	Chr4:6015955-6015974	MsG0480018513.01.T01:CDS	40.0%
	AGACAAATGGAGTGGGATGT+AGG	+	Chr4:6015570-6015589	None:intergenic	45.0%
	AGAGAGATACCTGTTGTTGG+TGG	-	Chr4:6013881-6013900	MsG0480018513.01.T01:CDS	45.0%
	AGCGGAAACCTTATAACAGG+TGG	+	Chr4:6014843-6014862	None:intergenic	45.0%
	AGGTTCGTGGACATAAATGG+TGG	+	Chr4:6014876-6014895	None:intergenic	45.0%
	CCGATAGACCGCAAGTTATT+AGG	-	Chr4:6015806-6015825	MsG0480018513.01.T01:CDS	45.0%
	CCGGTTGAGTGTAGTTTCAA+TGG	+	Chr4:6015926-6015945	None:intergenic	45.0%
	CGAAATCGGAAATCGTGGTT+GGG	+	Chr4:6015067-6015086	None:intergenic	45.0%
	CGAACCAAACCCAATAGTGT+TGG	-	Chr4:6014934-6014953	MsG0480018513.01.T01:intron	45.0%
	CTAACACAACCCCACAAAAC+CGG	+	Chr4:6014768-6014787	None:intergenic	45.0%
	GAAGATTTAGCCACCACATG+TGG	-	Chr4:6014339-6014358	MsG0480018513.01.T01:intron	45.0%
	GAAGGAAGAAGAACAAAGGG+AGG	+	Chr4:6015709-6015728	None:intergenic	45.0%
	GACAAATGGAGTGGGATGTA+GGG	+	Chr4:6015569-6015588	None:intergenic	45.0%
	GGTTCGTGGACATAAATGGT+GGG	+	Chr4:6014875-6014894	None:intergenic	45.0%
	GTGTGTTGCAAGATATGAGG+AGG	+	Chr4:6013466-6013485	None:intergenic	45.0%
	GTTCCATTCCATGGCTGAAT+GGG	+	Chr4:6015186-6015205	None:intergenic	45.0%
	TAGTGGAAACCTTAGGTTCG+TGG	+	Chr4:6014889-6014908	None:intergenic	45.0%
	TATTGGCATGGCATAGTGAG+TGG	-	Chr4:6013596-6013615	MsG0480018513.01.T01:CDS	45.0%
	TCGTGGACATAAATGGTGAG+TGG	+	Chr4:6014917-6014936	None:intergenic	45.0%
	TTAAGAGTCCCACATCGGAT+AGG	-	Chr4:6014972-6014991	MsG0480018513.01.T01:intron	45.0%
	TTCTTAGCTAGGCTTCGTCA+TGG	+	Chr4:6014597-6014616	None:intergenic	45.0%
!	ACACTATTGGGTTTGGTTCG+TGG	+	Chr4:6014934-6014953	None:intergenic	45.0%
!	ATGGACAGCCCTTTGACTTT+AGG	-	Chr4:6015974-6015993	MsG0480018513.01.T01:CDS	45.0%
!	TCAACCGGCCTTAATGCTTT+TGG	-	Chr4:6015938-6015957	MsG0480018513.01.T01:CDS	45.0%
!!	ACTTCACAAGGCGGTTTTGT+GGG	-	Chr4:6014755-6014774	MsG0480018513.01.T01:CDS	45.0%
!!	ATACCTGTTGTTGGTGGTAG+TGG	-	Chr4:6013887-6013906	MsG0480018513.01.T01:CDS	45.0%
!!	TAGTTGTTGGCTCATGACCA+TGG	+	Chr4:6015156-6015175	None:intergenic	45.0%
!!!	TAATATTTAAATATTTTGTT+TGG	-	Chr4:6015488-6015507	MsG0480018513.01.T01:intron	5.0%
	AATGGGTGTGGCGTAGTTGT+TGG	+	Chr4:6015169-6015188	None:intergenic	50.0%
	ACACCCATTCAGCCATGGAA+TGG	-	Chr4:6015180-6015199	MsG0480018513.01.T01:intron	50.0%
	AGTCCACTACCACCAACAAC+AGG	+	Chr4:6013893-6013912	None:intergenic	50.0%
	ATCCCACATCGGATAGGAGA+TGG	-	Chr4:6014698-6014717	MsG0480018513.01.T01:CDS	50.0%
	ATTCCATGGCTGAATGGGTG+TGG	+	Chr4:6015181-6015200	None:intergenic	50.0%
	CAAAACCGCCTTGTGAAGTG+AGG	+	Chr4:6014754-6014773	None:intergenic	50.0%
	CCATTGGGCCACCTGTTATA+AGG	-	Chr4:6014832-6014851	MsG0480018513.01.T01:CDS	50.0%
	CCTTATAACAGGTGGCCCAA+TGG	+	Chr4:6014835-6014854	None:intergenic	50.0%
	CTGCTCAATCTTGTGTGGGA+GGG	+	Chr4:6015092-6015111	None:intergenic	50.0%
	GATTTAGCCACCACATGTGG+TGG	-	Chr4:6014342-6014361	MsG0480018513.01.T01:intron	50.0%
	GCAATCCTCACTTCACAAGG+CGG	-	Chr4:6014746-6014765	MsG0480018513.01.T01:CDS	50.0%
	GCGAAATCGGAAATCGTGGT+TGG	+	Chr4:6015068-6015087	None:intergenic	50.0%
	GCGACCAACACTATTGGGTT+TGG	+	Chr4:6014941-6014960	None:intergenic	50.0%
	GCGTCTGCTCAATCTTGTGT+GGG	+	Chr4:6015096-6015115	None:intergenic	50.0%
	GGTTCCATTCCATGGCTGAA+TGG	+	Chr4:6015187-6015206	None:intergenic	50.0%
	GTTAGGGAGATGCCTGTTGT+TGG	-	Chr4:6016160-6016179	MsG0480018513.01.T01:CDS	50.0%
	TCAAAGGGCTGTCCATCATG+CGG	+	Chr4:6015970-6015989	None:intergenic	50.0%
	TCTGCTCAATCTTGTGTGGG+AGG	+	Chr4:6015093-6015112	None:intergenic	50.0%
!	CACTTCACAAGGCGGTTTTG+TGG	-	Chr4:6014754-6014773	MsG0480018513.01.T01:CDS	50.0%
!	GATCATGCGGACTGAACCAA+AGG	+	Chr4:6013675-6013694	None:intergenic	50.0%
!	GGGTGTTGCAAGAGAGTAGA+AGG	+	Chr4:6015727-6015746	None:intergenic	50.0%
!	TCGTGGACATAAATGGTGGG+TGG	+	Chr4:6014872-6014891	None:intergenic	50.0%
!!	ATCCTCACAAGCCGGTTTTG+TGG	-	Chr4:6015029-6015048	MsG0480018513.01.T01:intron	50.0%
!!	ATGCCTGTTGTTGGTGGTAG+TGG	-	Chr4:6016169-6016188	MsG0480018513.01.T01:CDS	50.0%
!!	CGGTTTTGTGGGGTTGTGTT+AGG	-	Chr4:6014766-6014785	MsG0480018513.01.T01:CDS	50.0%
!!	CTTCACAAGGCGGTTTTGTG+GGG	-	Chr4:6014756-6014775	MsG0480018513.01.T01:CDS	50.0%
!!	TCCTCACAAGCCGGTTTTGT+GGG	-	Chr4:6015030-6015049	MsG0480018513.01.T01:intron	50.0%
	AATGGTGAGTGGCCCGATAG+TGG	+	Chr4:6014906-6014925	None:intergenic	55.0%
	AGGCCATCTCCTATCCGATG+TGG	+	Chr4:6014704-6014723	None:intergenic	55.0%
	AGGGAGATGCCTGTTGTTGG+TGG	-	Chr4:6016163-6016182	MsG0480018513.01.T01:CDS	55.0%
	CCCTCGCGACCAACACTATT+GGG	+	Chr4:6014946-6014965	None:intergenic	55.0%
	GGCCATCTCCTATCCGATGT+GGG	+	Chr4:6014703-6014722	None:intergenic	55.0%
	GGCGTCTGCTCAATCTTGTG+TGG	+	Chr4:6015097-6015116	None:intergenic	55.0%
	GGGGCAATCCTCACTTCACA+AGG	-	Chr4:6014743-6014762	MsG0480018513.01.T01:CDS	55.0%
	GGGTGCGAAATCGGAAATCG+TGG	+	Chr4:6015072-6015091	None:intergenic	55.0%
	GTCCCACATCGGATAGGAGA+TGG	-	Chr4:6014978-6014997	MsG0480018513.01.T01:intron	55.0%
	TGGGGGAAATCCTCACAAGC+CGG	-	Chr4:6015021-6015040	MsG0480018513.01.T01:intron	55.0%
!	TGTGTGGGAGGGTGCGAAAT+CGG	+	Chr4:6015081-6015100	None:intergenic	55.0%
!!	AATGGTGGGTGGCTCGATAG+CGG	+	Chr4:6014861-6014880	None:intergenic	55.0%
!!	ACCCAATAGTGTTGGTCGCG+AGG	-	Chr4:6014942-6014961	MsG0480018513.01.T01:intron	55.0%
!!	CCAATAGTGTTGGTCGCGAG+GGG	-	Chr4:6014944-6014963	MsG0480018513.01.T01:intron	55.0%
!!	CCCAATAGTGTTGGTCGCGA+GGG	-	Chr4:6014943-6014962	MsG0480018513.01.T01:intron	55.0%
!!	CCTCACAAGCCGGTTTTGTG+GGG	-	Chr4:6015031-6015050	MsG0480018513.01.T01:intron	55.0%
!!	GGCCCGATAGTGGAAACCTT+AGG	+	Chr4:6014896-6014915	None:intergenic	55.0%
	ACGCCACACCCATTCAGCCA+TGG	-	Chr4:6015175-6015194	MsG0480018513.01.T01:intron	60.0%
	CCCCTCGCGACCAACACTAT+TGG	+	Chr4:6014947-6014966	None:intergenic	60.0%
!	GCGGACTGAACCAAAGGCAG+TGG	+	Chr4:6013669-6013688	None:intergenic	60.0%
!!	CCCCACAAAACCGGCTTGTG+AGG	+	Chr4:6015034-6015053	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	6013425	6016297	6013425	ID=MsG0480018513.01;Name=MsG0480018513.01
Chr4	mRNA	6013425	6016297	6013425	ID=MsG0480018513.01.T01;Parent=MsG0480018513.01;Name=MsG0480018513.01.T01;_AED=0.49;_eAED=0.62;_QI=0\|0\|0\|1\|1\|1\|3\|0\|467
Chr4	exon	6015722	6016297	6015722	ID=MsG0480018513.01.T01:exon:2136;Parent=MsG0480018513.01.T01
Chr4	exon	6014592	6014934	6014592	ID=MsG0480018513.01.T01:exon:2135;Parent=MsG0480018513.01.T01
Chr4	exon	6013425	6013909	6013425	ID=MsG0480018513.01.T01:exon:2134;Parent=MsG0480018513.01.T01
Chr4	CDS	6015722	6016297	6015722	ID=MsG0480018513.01.T01:cds;Parent=MsG0480018513.01.T01
Chr4	CDS	6014592	6014934	6014592	ID=MsG0480018513.01.T01:cds;Parent=MsG0480018513.01.T01
Chr4	CDS	6013425	6013909	6013425	ID=MsG0480018513.01.T01:cds;Parent=MsG0480018513.01.T01

Gene Sequence

>MsG0480018513.01.T01

ATGCCTTCCAAACATTTCCTCATCACTTTGTTCTTCTTCCTCCTCATATCTTGCAACACACTCTCTGCTTCAACTTCATCAGAAAAAGAAGACACTTTTGATTTTGTTCGTCCAATAGATCGCAAGTTGTTAGGCCTAAACAAGAAGGAAAAGCTAAATCATTTCAAATTTTATTGGCATGGCATAGTGAGTGGAAAAAACCCTACTTCTATCATAGTTATTCCACCATCATTAAACTCTACCACTGCCTTTGGTTCAGTCCGCATGATCAACAACCCTTTAACTTTAGGACCACAGTTGAATTCTAAGATTGTTGGAAAAGCTCAAGGGTTCTATGCATCTGCATGCAAAGATGAAGTTGATTTGCTTATGGCTATGAATTTTGCTTTTACTGAAGGAAAGTATAATGGAAGTACACTTACTATTTTGGGAAGGAATGCTGTTTTTCATAAAGTTAGAGAGATACCTGTTGTTGGTGGTAGTGGACTTTTCAGATTTGCAAGAGGGTATGCTGAAGCTAATACTCATTCGATTGATCTCAAATCTGAGGATGCTTGTGTAGAGTACAATGTTCATGCCCAACCACGATTTTTAAGATGGTATCAGAGCATCTTCAAGATCCATTGGGCCACCTGTTATAAGGTTTCCGCTATCGAGCCACCCACCATTTATGTCCACGAACCTAAGGTTTCCACTATCGGGCCACTCACCATTTATGTCCACGAACCAAACCCAATAGTGTTGGTCGCGAGGGGTTGTGTTAAGAGTCCCACATCGGATAGGAGATGGCCTGACAATGTGTTTATAAGTGGGGGAAATCCTCACAAGCCGGTTTTGTGGGGTTGTGTTAGACCCAACCACGATTTCCGATTTCGCACCCTCCCACACAAGATTGAGCAGACGCCACAAAATGATGCATACCGCAAGTTATTAGGCCTAAACAAGAAGGAAAAACTAAGCCATTTCAGATTCTACTGGTACGACATACTAAGTGGAAATAACCCTACAACAATTACAATTGTTCAGCCACCATTGAAACTACACTCAACCGGCCTTAATGCTTTTGGTTTAGTCCGCATGATGGACAGCCCTTTGACTTTAGGACCGCAATTGAGTTCCAAACTTGTTGGAAAAGCTCAAGGTTTCTATGCATCTGCATCACAGGAAGAAATAGGTTTTCTTATGACAATGAATTTTGCTTTCATTGAAGGAAAGTATAATGGTAGTACTATTACTATCTTGGGGAGGAATCATGCTCTTGATAAGGTTAGGGAGATGCCTGTTGTTGGTGGTAGTGGACTTTTCAGATTTGCTAGAGGGTATGCTCAAGCTAGTACTCATTGGGTTGATCTCAAATCTGGGGATGCATGTGTTGAGTACAATCTTCATGTTTTTCACTATTGA

Protein sequence

>MsG0480018513.01.T01

MPSKHFLITLFFFLLISCNTLSASTSSEKEDTFDFVRPIDRKLLGLNKKEKLNHFKFYWHGIVSGKNPTSIIVIPPSLNSTTAFGSVRMINNPLTLGPQLNSKIVGKAQGFYASACKDEVDLLMAMNFAFTEGKYNGSTLTILGRNAVFHKVREIPVVGGSGLFRFARGYAEANTHSIDLKSEDACVEYNVHAQPRFLRWYQSIFKIHWATCYKVSAIEPPTIYVHEPKVSTIGPLTIYVHEPNPIVLVARGCVKSPTSDRRWPDNVFISGGNPHKPVLWGCVRPNHDFRFRTLPHKIEQTPQNDAYRKLLGLNKKEKLSHFRFYWYDILSGNNPTTITIVQPPLKLHSTGLNAFGLVRMMDSPLTLGPQLSSKLVGKAQGFYASASQEEIGFLMTMNFAFIEGKYNGSTITILGRNHALDKVREMPVVGGSGLFRFARGYAQASTHWVDLKSGDACVEYNLHVFHY*