AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019150.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019150.01.T02 MTR_4g024020 88.356 146 16 1 1 145 216 361 3.71e-86 261
MsG0480019150.01.T02 MTR_7g102490 82.051 156 26 2 1 154 215 370 5.30e-86 260
MsG0480019150.01.T02 MTR_7g102460 77.419 155 34 1 1 154 214 368 6.47e-82 250
MsG0480019150.01.T02 MTR_7g102560 62.838 148 51 3 1 145 210 356 5.44e-55 180
MsG0480019150.01.T02 MTR_7g102450 62.585 147 51 3 1 145 200 344 2.76e-54 178
MsG0480019150.01.T02 MTR_7g117405 62.585 147 47 4 1 145 214 354 1.59e-50 168
MsG0480019150.01.T02 MTR_1g062380 54.167 144 64 2 3 145 223 365 1.68e-47 160
MsG0480019150.01.T02 MTR_5g045970 54.167 144 63 2 3 145 223 364 2.01e-47 160
MsG0480019150.01.T02 MTR_5g045960 53.061 147 65 3 1 145 214 358 3.78e-43 149
MsG0480019150.01.T02 MTR_7g102520 57.333 150 53 4 3 145 217 362 1.99e-41 144
MsG0480019150.01.T02 MTR_7g102550 47.260 146 75 2 1 145 214 358 7.54e-34 124
MsG0480019150.01.T02 MTR_4g485630 44.898 147 74 5 3 145 209 352 1.57e-30 115
MsG0480019150.01.T02 MTR_4g485590 42.361 144 77 4 3 145 189 327 8.50e-29 109
MsG0480019150.01.T02 MTR_5g040030 46.622 148 71 6 3 145 219 363 3.47e-27 105
MsG0480019150.01.T02 MTR_8g066610 38.194 144 85 3 3 145 217 357 3.85e-26 102
MsG0480019150.01.T02 MTR_1g040310 42.466 146 77 4 3 145 218 359 3.37e-25 100
MsG0480019150.01.T02 MTR_4g117980 41.497 147 76 5 6 145 213 356 3.44e-25 100
MsG0480019150.01.T02 MTR_6g035265 40.268 149 77 5 6 145 204 349 1.11e-24 99.0
MsG0480019150.01.T02 MTR_5g016660 42.177 147 82 3 3 146 214 360 1.30e-24 98.6
MsG0480019150.01.T02 MTR_0536s0020 40.541 148 77 5 6 145 210 354 3.90e-24 97.4
MsG0480019150.01.T02 MTR_4g485640 39.161 143 81 4 6 145 403 542 1.97e-23 95.5
MsG0480019150.01.T02 MTR_7g055710 40.541 148 79 6 3 145 215 358 2.49e-23 95.1
MsG0480019150.01.T02 MTR_4g485620 36.111 144 85 3 3 145 197 334 2.57e-23 95.1
MsG0480019150.01.T02 MTR_4g117960 39.490 157 84 5 6 154 211 364 3.09e-23 94.7
MsG0480019150.01.T02 MTR_4g118000 39.474 152 80 6 1 145 195 341 3.28e-23 94.7
MsG0480019150.01.T02 MTR_4g117890 39.189 148 79 5 6 145 205 349 4.67e-23 94.4
MsG0480019150.01.T02 MTR_6g035295 41.722 151 71 5 3 145 218 359 6.37e-23 94.0
MsG0480019150.01.T02 MTR_7g070930 40.136 147 82 4 3 145 218 362 1.57e-22 92.8
MsG0480019150.01.T02 MTR_2g035040 38.356 146 82 3 6 145 118 261 1.60e-22 92.4
MsG0480019150.01.T02 MTR_5g039900 42.384 151 71 5 3 145 217 359 1.63e-22 92.8
MsG0480019150.01.T02 MTR_4g108250 40.136 147 82 4 3 145 218 362 2.37e-22 92.4
MsG0480019150.01.T02 MTR_7g071040 40.816 147 81 4 3 145 221 365 7.22e-22 90.9
MsG0480019150.01.T02 MTR_4g117950 36.986 146 81 5 6 145 197 337 1.01e-21 90.5
MsG0480019150.01.T02 MTR_7g070910 38.095 147 85 4 3 145 215 359 3.21e-21 89.4
MsG0480019150.01.T02 MTR_8g044140 42.177 147 79 5 3 145 180 324 4.11e-21 89.0
MsG0480019150.01.T02 MTR_6g035185 40.268 149 77 5 6 145 213 358 4.35e-21 89.0
MsG0480019150.01.T02 MTR_4g031800 35.616 146 89 4 3 145 204 347 3.93e-20 85.9
MsG0480019150.01.T02 MTR_7g039550 40.972 144 70 4 9 145 2 137 5.51e-20 84.0
MsG0480019150.01.T02 MTR_7g070780 39.333 150 78 6 3 145 215 358 1.28e-19 84.7
MsG0480019150.01.T02 MTR_7g070610 39.456 147 82 5 3 145 217 360 1.31e-19 84.7
MsG0480019150.01.T02 MTR_5g067170 39.456 147 79 5 6 145 211 354 1.41e-19 84.3
MsG0480019150.01.T02 MTR_7g070740 38.514 148 82 6 3 145 215 358 1.46e-19 84.3
MsG0480019150.01.T02 MTR_2g035020 40.136 147 78 5 6 145 213 356 1.70e-19 84.3
MsG0480019150.01.T02 MTR_0536s0010 35.526 152 86 6 1 145 205 351 2.20e-19 84.0
MsG0480019150.01.T02 MTR_7g470610 37.415 147 85 5 3 145 72 215 3.22e-19 82.0
MsG0480019150.01.T02 MTR_7g070583 37.415 147 85 5 3 145 72 215 3.22e-19 82.0
MsG0480019150.01.T02 MTR_2g034990 40.136 147 78 5 6 145 213 356 3.27e-19 83.6
MsG0480019150.01.T02 MTR_7g070810 39.073 151 69 6 3 145 213 348 3.28e-19 83.6
MsG0480019150.01.T02 MTR_5g029800 38.776 147 80 5 6 145 209 352 9.03e-19 82.0
MsG0480019150.01.T02 MTR_7g070870 36.111 144 83 3 3 145 220 355 1.23e-18 81.6
MsG0480019150.01.T02 MTR_7g070660 36.735 147 81 6 3 145 215 353 6.05e-18 79.7
MsG0480019150.01.T02 MTR_7g070940 35.616 146 80 5 3 145 213 347 7.73e-18 79.7
MsG0480019150.01.T02 MTR_7g070800 36.986 146 84 4 3 145 210 350 5.29e-17 77.0
MsG0480019150.01.T02 MTR_7g070860 37.500 144 72 3 3 145 211 337 6.28e-17 77.0
MsG0480019150.01.T02 MTR_8g077590 35.294 153 72 6 6 145 213 351 1.09e-16 76.3
MsG0480019150.01.T02 MTR_8g012745 28.931 159 86 5 6 148 211 358 1.61e-16 75.9
MsG0480019150.01.T02 MTR_7g012120 38.776 147 79 6 6 145 216 358 2.04e-16 75.5
MsG0480019150.01.T02 MTR_8g032950 35.135 148 85 5 6 145 211 355 7.28e-16 73.9
MsG0480019150.01.T02 MTR_8g090095 34.194 155 79 8 3 145 219 362 1.85e-15 72.8
MsG0480019150.01.T02 MTR_2g059240 36.552 145 82 4 3 145 219 355 2.97e-15 72.0
MsG0480019150.01.T02 MTR_8g466240 34.014 147 88 6 3 145 200 341 3.78e-15 71.6
MsG0480019150.01.T02 MTR_1g029540 30.935 139 82 3 13 145 212 342 2.29e-14 69.7
MsG0480019150.01.T02 MTR_8g056740 34.028 144 87 5 3 145 111 247 3.40e-14 68.9
MsG0480019150.01.T02 MTR_8g071070 34.146 123 67 4 26 145 244 355 8.11e-14 68.2
MsG0480019150.01.T02 MTR_5g087620 35.065 154 88 7 1 145 223 373 8.60e-14 67.8
MsG0480019150.01.T02 MTR_7g070760 36.301 146 62 5 3 145 30 147 8.85e-14 66.2
MsG0480019150.01.T02 MTR_4g079270 35.821 134 74 4 12 145 220 341 1.04e-13 67.8
MsG0480019150.01.T02 MTR_3g069690 31.250 144 89 5 2 142 198 334 1.24e-13 67.4
MsG0480019150.01.T02 MTR_3g008010 34.532 139 84 5 6 142 230 363 1.42e-13 67.4
MsG0480019150.01.T02 MTR_0288s0020 43.023 86 46 2 57 142 264 346 1.46e-13 67.4
MsG0480019150.01.T02 MTR_6g013440 33.803 142 88 5 2 142 230 366 2.22e-13 66.6
MsG0480019150.01.T02 MTR_7g117170 31.579 152 80 5 5 142 216 357 3.92e-13 66.2
MsG0480019150.01.T02 MTR_4g008630 31.206 141 78 5 13 145 216 345 5.32e-13 65.5
MsG0480019150.01.T02 MTR_6g014050 31.915 141 84 5 6 142 234 366 6.35e-13 65.5
MsG0480019150.01.T02 MTR_7g047030 31.818 154 82 6 5 145 207 350 7.64e-13 65.1
MsG0480019150.01.T02 MTR_7g047270 31.818 154 82 6 5 145 207 350 7.64e-13 65.1
MsG0480019150.01.T02 MTR_6g013900 34.507 142 87 5 2 142 228 364 8.80e-13 65.1
MsG0480019150.01.T02 MTR_0078s0060 30.921 152 82 4 6 145 209 349 1.02e-12 64.7
MsG0480019150.01.T02 MTR_7g011470 34.507 142 87 5 2 142 215 351 1.08e-12 64.7
MsG0480019150.01.T02 MTR_7g011470 34.507 142 87 5 2 142 211 347 1.13e-12 64.7
MsG0480019150.01.T02 MTR_8g006270 29.299 157 83 5 5 145 204 348 1.13e-12 64.7
MsG0480019150.01.T02 MTR_4g094220 32.653 147 91 5 1 142 221 364 1.15e-12 64.7
MsG0480019150.01.T02 MTR_4g079250 34.559 136 73 4 12 145 220 341 1.17e-12 64.7
MsG0480019150.01.T02 MTR_0184s0030 29.605 152 84 4 6 145 212 352 1.43e-12 64.3
MsG0480019150.01.T02 MTR_8g027885 33.758 157 79 7 5 148 217 361 2.66e-12 63.5
MsG0480019150.01.T02 MTR_0477s0010 41.860 86 47 2 57 142 120 202 2.75e-12 63.2
MsG0480019150.01.T02 MTR_8g006710 28.188 149 87 2 6 145 212 349 2.85e-12 63.5
MsG0480019150.01.T02 MTR_8g068330 28.369 141 90 2 6 145 219 349 3.59e-12 63.2
MsG0480019150.01.T02 MTR_3g069710 29.371 143 89 5 3 142 204 337 3.72e-12 63.2
MsG0480019150.01.T02 MTR_5g464760 30.986 142 94 3 2 142 227 365 3.73e-12 63.2
MsG0480019150.01.T02 MTR_6g033660 28.767 146 82 5 5 142 214 345 3.87e-12 63.2
MsG0480019150.01.T02 MTR_2g008210 30.822 146 90 5 2 142 222 361 4.10e-12 63.2
MsG0480019150.01.T02 MTR_6g014310 36.207 116 69 4 28 142 255 366 4.89e-12 62.8
MsG0480019150.01.T02 MTR_2g008226 40.404 99 50 4 48 142 259 352 5.88e-12 62.8
MsG0480019150.01.T02 MTR_6g013990 32.000 150 80 6 2 142 227 363 6.26e-12 62.8
MsG0480019150.01.T02 MTR_6g033615 34.483 116 59 4 29 142 232 332 6.75e-12 62.4
MsG0480019150.01.T02 MTR_0078s0010 30.323 155 83 6 5 145 207 350 7.70e-12 62.4
MsG0480019150.01.T02 MTR_5g035580 33.108 148 81 7 6 147 206 341 9.13e-12 62.0
MsG0480019150.01.T02 MTR_5g464810 31.915 141 92 3 2 142 227 363 9.56e-12 62.0
MsG0480019150.01.T02 MTR_5g064240 31.915 141 92 3 2 142 227 363 9.56e-12 62.0
MsG0480019150.01.T02 MTR_6g033625 40.909 88 49 2 57 142 260 346 1.13e-11 62.0
MsG0480019150.01.T02 MTR_0184s0040 30.968 155 82 6 5 145 222 365 1.27e-11 61.6
MsG0480019150.01.T02 MTR_0078s0190 30.968 155 82 6 5 145 222 365 1.27e-11 61.6
MsG0480019150.01.T02 MTR_8g008990 29.677 155 84 4 6 145 209 353 1.29e-11 61.6
MsG0480019150.01.T02 MTR_6g014290 33.094 139 86 5 6 142 230 363 1.80e-11 61.2
MsG0480019150.01.T02 MTR_8g012650 31.013 158 80 6 3 142 207 353 1.94e-11 61.2
MsG0480019150.01.T02 MTR_5g027210 26.415 159 97 3 6 145 214 371 1.95e-11 61.2
MsG0480019150.01.T02 MTR_8g009073 30.464 151 84 4 6 145 80 220 2.03e-11 60.8
MsG0480019150.01.T02 MTR_6g005600 28.289 152 88 4 6 145 210 352 2.10e-11 61.2
MsG0480019150.01.T02 MTR_6g033675 28.571 147 87 4 6 145 214 349 2.25e-11 60.8
MsG0480019150.01.T02 MTR_2g098430 32.026 153 87 7 1 145 213 356 2.33e-11 60.8
MsG0480019150.01.T02 MTR_7g071050 39.535 86 48 2 62 145 231 314 2.50e-11 60.8
MsG0480019150.01.T02 MTR_8g009073 30.464 151 84 4 6 145 209 349 2.56e-11 60.8
MsG0480019150.01.T02 MTR_6g033725 28.477 151 80 5 3 142 210 343 2.57e-11 60.8
MsG0480019150.01.T02 MTR_8g027870 33.121 157 80 7 5 148 217 361 2.78e-11 60.8
MsG0480019150.01.T02 MTR_6g023665 29.139 151 85 4 5 145 217 355 3.05e-11 60.5
MsG0480019150.01.T02 MTR_6g036650 43.529 85 40 2 63 145 278 356 3.36e-11 60.5
MsG0480019150.01.T02 MTR_5g035560 33.784 148 80 7 6 147 204 339 4.04e-11 60.1
MsG0480019150.01.T02 MTR_5g033000 61.538 39 15 0 66 104 30 68 4.22e-11 56.2
MsG0480019150.01.T02 MTR_3g435310 36.283 113 58 5 37 145 203 305 4.35e-11 60.1
MsG0480019150.01.T02 MTR_0036s0220 31.776 107 72 1 2 108 227 332 4.45e-11 60.1
MsG0480019150.01.T02 MTR_8g006730 27.517 149 88 2 6 145 213 350 7.51e-11 59.3
MsG0480019150.01.T02 MTR_8g012635 29.747 158 82 5 3 142 207 353 8.79e-11 59.3
MsG0480019150.01.T01 MTR_4g024020 88.506 174 19 1 1 173 188 361 5.24e-105 310
MsG0480019150.01.T01 MTR_7g102490 79.891 184 34 3 1 182 188 370 1.43e-98 294
MsG0480019150.01.T01 MTR_7g102460 73.770 183 45 2 1 182 188 368 6.12e-91 274
MsG0480019150.01.T01 MTR_7g102450 61.491 161 58 3 15 173 186 344 6.19e-59 191
MsG0480019150.01.T01 MTR_7g102560 61.006 159 58 3 18 173 199 356 1.60e-57 187
MsG0480019150.01.T01 MTR_7g117405 61.635 159 53 4 17 173 202 354 5.89e-55 181
MsG0480019150.01.T01 MTR_5g045970 51.266 158 74 2 17 173 209 364 1.83e-49 167
MsG0480019150.01.T01 MTR_1g062380 51.899 158 74 2 17 173 209 365 9.42e-49 165
MsG0480019150.01.T01 MTR_5g045960 49.701 167 80 3 9 173 194 358 7.30e-46 157
MsG0480019150.01.T01 MTR_7g102520 55.152 165 62 5 17 173 202 362 1.51e-42 149
MsG0480019150.01.T01 MTR_7g102550 46.541 159 79 3 16 173 205 358 1.77e-35 129
MsG0480019150.01.T01 MTR_4g485630 44.231 156 80 5 22 173 200 352 8.18e-32 119
MsG0480019150.01.T01 MTR_4g485590 39.634 164 93 4 11 173 169 327 3.22e-31 117
MsG0480019150.01.T01 MTR_8g066610 34.483 174 110 3 1 173 187 357 1.82e-28 110
MsG0480019150.01.T01 MTR_4g118000 40.361 166 87 6 15 173 181 341 1.58e-27 107
MsG0480019150.01.T01 MTR_4g117980 39.535 172 93 6 10 173 188 356 2.43e-27 107
MsG0480019150.01.T01 MTR_5g040030 46.622 148 71 6 31 173 219 363 4.94e-27 106
MsG0480019150.01.T01 MTR_6g035265 39.306 173 92 6 11 173 180 349 9.91e-27 105
MsG0480019150.01.T01 MTR_4g485640 37.853 177 99 6 1 173 373 542 3.55e-26 104
MsG0480019150.01.T01 MTR_1g040310 41.830 153 82 4 24 173 211 359 8.31e-26 103
MsG0480019150.01.T01 MTR_5g016660 42.208 154 86 3 24 174 207 360 1.44e-25 102
MsG0480019150.01.T01 MTR_7g055710 37.725 167 95 6 12 173 196 358 2.35e-25 102
MsG0480019150.01.T01 MTR_4g108250 38.554 166 96 4 12 173 199 362 4.38e-25 101
MsG0480019150.01.T01 MTR_0536s0020 40.994 161 83 6 22 173 197 354 6.35e-25 100
MsG0480019150.01.T01 MTR_4g117960 40.116 172 91 6 11 173 187 355 7.26e-25 100
MsG0480019150.01.T01 MTR_4g485620 33.333 162 101 3 13 173 179 334 1.07e-24 99.8
MsG0480019150.01.T01 MTR_4g117890 39.157 166 89 6 17 173 187 349 2.34e-24 99.0
MsG0480019150.01.T01 MTR_7g070930 38.889 162 93 4 16 173 203 362 6.08e-24 97.8
MsG0480019150.01.T01 MTR_4g117950 35.838 173 98 7 8 173 171 337 3.19e-23 95.9
MsG0480019150.01.T01 MTR_6g035295 41.722 151 71 5 31 173 218 359 7.88e-23 94.7
MsG0480019150.01.T01 MTR_5g039900 40.361 166 83 5 16 173 202 359 8.36e-23 94.7
MsG0480019150.01.T01 MTR_7g071040 38.889 162 93 4 16 173 206 365 9.29e-23 94.7
MsG0480019150.01.T01 MTR_2g035040 37.888 161 91 4 20 173 103 261 1.07e-22 94.0
MsG0480019150.01.T01 MTR_4g031800 34.545 165 103 4 12 173 185 347 1.27e-22 94.4
MsG0480019150.01.T01 MTR_7g070910 37.725 167 95 6 11 173 198 359 3.49e-22 92.8
MsG0480019150.01.T01 MTR_8g044140 41.558 154 84 5 24 173 173 324 1.04e-21 91.7
MsG0480019150.01.T01 MTR_7g070780 39.130 161 85 6 20 173 204 358 1.87e-21 90.9
MsG0480019150.01.T01 MTR_6g035185 39.306 173 92 6 11 173 189 358 2.18e-21 90.9
MsG0480019150.01.T01 MTR_7g070740 37.736 159 90 6 20 173 204 358 4.27e-21 89.7
MsG0480019150.01.T01 MTR_7g070610 38.608 158 90 5 20 173 206 360 6.17e-21 89.4
MsG0480019150.01.T01 MTR_0536s0010 34.969 163 94 6 18 173 194 351 1.31e-20 88.6
MsG0480019150.01.T01 MTR_5g067170 37.427 171 96 6 11 173 187 354 2.54e-20 87.8
MsG0480019150.01.T01 MTR_7g070810 36.970 165 81 6 17 173 199 348 4.20e-20 87.0
MsG0480019150.01.T01 MTR_7g039550 40.972 144 70 4 37 173 2 137 7.02e-20 84.7
MsG0480019150.01.T01 MTR_7g070870 35.758 165 83 6 17 173 206 355 7.97e-20 86.3
MsG0480019150.01.T01 MTR_2g035020 40.136 147 78 5 34 173 213 356 1.82e-19 85.1
MsG0480019150.01.T01 MTR_5g029800 36.842 171 97 6 11 173 185 352 2.39e-19 84.7
MsG0480019150.01.T01 MTR_7g070660 36.076 158 89 6 20 173 204 353 3.24e-19 84.3
MsG0480019150.01.T01 MTR_7g070940 35.294 153 85 5 24 173 206 347 3.81e-19 84.3
MsG0480019150.01.T01 MTR_2g034990 40.136 147 78 5 34 173 213 356 4.02e-19 84.3
MsG0480019150.01.T01 MTR_7g470610 37.415 147 85 5 31 173 72 215 6.28e-19 82.4
MsG0480019150.01.T01 MTR_7g070583 37.415 147 85 5 31 173 72 215 6.28e-19 82.4
MsG0480019150.01.T01 MTR_7g070800 36.601 153 89 4 24 173 203 350 4.74e-18 81.3
MsG0480019150.01.T01 MTR_7g070860 37.086 151 77 3 24 173 204 337 5.17e-18 80.9
MsG0480019150.01.T01 MTR_8g032950 36.196 163 92 6 20 173 196 355 1.69e-17 79.7
MsG0480019150.01.T01 MTR_7g012120 36.842 171 96 7 11 173 192 358 6.01e-17 78.2
MsG0480019150.01.T01 MTR_8g056740 33.775 151 92 5 24 173 104 247 6.59e-16 74.7
MsG0480019150.01.T01 MTR_7g070760 34.568 162 75 5 15 173 14 147 8.92e-16 72.4
MsG0480019150.01.T01 MTR_8g012745 29.448 163 87 6 31 176 207 358 1.41e-15 73.9
MsG0480019150.01.T01 MTR_8g077590 35.294 153 72 6 34 173 213 351 2.13e-15 73.6
MsG0480019150.01.T01 MTR_2g059240 35.484 155 88 5 22 173 210 355 2.97e-15 73.2
MsG0480019150.01.T01 MTR_8g466240 34.014 147 88 6 31 173 200 341 9.58e-15 71.6
MsG0480019150.01.T01 MTR_8g071070 30.864 162 95 6 18 173 205 355 2.04e-14 70.9
MsG0480019150.01.T01 MTR_1g029540 30.935 139 82 3 41 173 212 342 5.25e-14 69.3
MsG0480019150.01.T01 MTR_4g094220 30.000 170 111 5 6 170 198 364 5.55e-14 69.3
MsG0480019150.01.T01 MTR_8g090095 34.194 155 79 8 31 173 219 362 7.47e-14 68.9
MsG0480019150.01.T01 MTR_3g069690 29.268 164 106 5 10 170 178 334 1.11e-13 68.6
MsG0480019150.01.T01 MTR_5g087620 35.065 154 88 7 29 173 223 373 1.29e-13 68.6
MsG0480019150.01.T01 MTR_4g079270 35.821 134 74 4 40 173 220 341 1.67e-13 68.2
MsG0480019150.01.T01 MTR_0288s0020 43.023 86 46 2 85 170 264 346 2.26e-13 67.8
MsG0480019150.01.T01 MTR_3g008010 34.532 139 84 5 34 170 230 363 2.72e-13 67.4
MsG0480019150.01.T01 MTR_6g013440 34.058 138 85 5 34 170 234 366 3.74e-13 67.0
MsG0480019150.01.T01 MTR_7g117170 30.921 152 81 4 33 170 216 357 7.36e-13 66.2
MsG0480019150.01.T01 MTR_2g008210 31.169 154 95 5 22 170 214 361 1.09e-12 65.9
MsG0480019150.01.T01 MTR_4g008630 31.206 141 78 5 41 173 216 345 1.13e-12 65.5
MsG0480019150.01.T01 MTR_7g047030 31.818 154 82 6 33 173 207 350 1.26e-12 65.5
MsG0480019150.01.T01 MTR_7g047270 31.818 154 82 6 33 173 207 350 1.26e-12 65.5
MsG0480019150.01.T01 MTR_6g014050 31.915 141 84 5 34 170 234 366 1.36e-12 65.5
MsG0480019150.01.T01 MTR_0184s0030 27.419 186 95 6 5 173 190 352 1.41e-12 65.5
MsG0480019150.01.T01 MTR_0078s0060 30.921 152 82 4 34 173 209 349 1.74e-12 65.1
MsG0480019150.01.T01 MTR_6g013900 33.562 146 91 5 26 170 224 364 1.97e-12 65.1
MsG0480019150.01.T01 MTR_4g079250 34.559 136 73 4 40 173 220 341 2.03e-12 65.1
MsG0480019150.01.T01 MTR_7g011470 34.783 138 84 5 34 170 219 351 2.43e-12 64.7
MsG0480019150.01.T01 MTR_7g011470 34.783 138 84 5 34 170 215 347 2.47e-12 64.7
MsG0480019150.01.T01 MTR_8g027885 32.571 175 92 8 15 176 200 361 2.85e-12 64.3
MsG0480019150.01.T01 MTR_8g006710 28.188 149 87 2 34 173 212 349 3.59e-12 64.3
MsG0480019150.01.T01 MTR_8g006270 28.662 157 84 4 33 173 204 348 3.74e-12 64.3
MsG0480019150.01.T01 MTR_0477s0010 41.860 86 47 2 85 170 120 202 3.96e-12 63.5
MsG0480019150.01.T01 MTR_5g464810 31.944 144 94 3 27 170 224 363 4.18e-12 63.9
MsG0480019150.01.T01 MTR_5g064240 31.944 144 94 3 27 170 224 363 4.18e-12 63.9
MsG0480019150.01.T01 MTR_6g013990 31.013 158 87 6 22 170 219 363 4.27e-12 63.9
MsG0480019150.01.T01 MTR_3g069710 29.371 143 89 5 31 170 204 337 4.81e-12 63.9
MsG0480019150.01.T01 MTR_6g014310 36.207 116 69 4 56 170 255 366 6.63e-12 63.5
MsG0480019150.01.T01 MTR_6g033660 28.767 146 82 5 33 170 214 345 6.87e-12 63.5
MsG0480019150.01.T01 MTR_8g068330 28.369 141 90 2 34 173 219 349 7.62e-12 63.2
MsG0480019150.01.T01 MTR_2g008226 40.404 99 50 4 76 170 259 352 8.42e-12 63.2
MsG0480019150.01.T01 MTR_5g464760 30.986 142 94 3 30 170 227 365 9.25e-12 63.2
MsG0480019150.01.T01 MTR_0078s0010 30.968 155 82 6 33 173 207 350 1.57e-11 62.4
MsG0480019150.01.T01 MTR_8g027870 32.000 175 93 8 15 176 200 361 1.62e-11 62.4
MsG0480019150.01.T01 MTR_6g033615 34.483 116 59 4 57 170 232 332 1.74e-11 62.0
MsG0480019150.01.T01 MTR_0036s0220 31.818 110 74 1 27 136 224 332 2.11e-11 62.0
MsG0480019150.01.T01 MTR_5g035580 33.108 148 81 7 34 175 206 341 2.18e-11 62.0
MsG0480019150.01.T01 MTR_6g033625 40.909 88 49 2 85 170 260 346 2.49e-11 61.6
MsG0480019150.01.T01 MTR_8g008990 29.677 155 84 4 34 173 209 353 2.75e-11 61.6
MsG0480019150.01.T01 MTR_7g071050 39.535 86 48 2 90 173 231 314 2.77e-11 61.6
MsG0480019150.01.T01 MTR_6g014290 33.094 139 86 5 34 170 230 363 3.10e-11 61.6
MsG0480019150.01.T01 MTR_2g098430 32.026 153 87 7 29 173 213 356 3.27e-11 61.2
MsG0480019150.01.T01 MTR_5g027210 26.415 159 97 3 34 173 214 371 3.32e-11 61.2
MsG0480019150.01.T01 MTR_0184s0040 30.968 155 82 6 33 173 222 365 3.32e-11 61.2
MsG0480019150.01.T01 MTR_0078s0190 30.968 155 82 6 33 173 222 365 3.32e-11 61.2
MsG0480019150.01.T01 MTR_6g013920 29.114 158 100 5 17 170 215 364 3.48e-11 61.2
MsG0480019150.01.T01 MTR_8g009073 30.464 151 84 4 34 173 80 220 3.86e-11 60.8
MsG0480019150.01.T01 MTR_8g012650 31.013 158 80 6 31 170 207 353 4.11e-11 61.2
MsG0480019150.01.T01 MTR_6g005600 27.632 152 89 3 34 173 210 352 4.35e-11 61.2
MsG0480019150.01.T01 MTR_8g009063 27.586 174 99 5 15 173 197 358 4.76e-11 60.8
MsG0480019150.01.T01 MTR_6g033675 28.571 147 87 4 34 173 214 349 4.81e-11 60.8
MsG0480019150.01.T01 MTR_6g033725 28.477 151 80 5 31 170 210 343 5.70e-11 60.8
MsG0480019150.01.T01 MTR_8g009073 30.464 151 84 4 34 173 209 349 5.82e-11 60.8
MsG0480019150.01.T01 MTR_5g033000 61.538 39 15 0 94 132 30 68 6.31e-11 56.2
MsG0480019150.01.T01 MTR_6g036650 43.529 85 40 2 91 173 278 356 6.31e-11 60.5
MsG0480019150.01.T01 MTR_8g068360 29.605 152 92 6 25 173 213 352 6.34e-11 60.5
MsG0480019150.01.T01 MTR_6g023665 29.139 151 85 4 33 173 217 355 6.43e-11 60.5
MsG0480019150.01.T01 MTR_5g035560 33.784 148 80 7 34 175 204 339 8.45e-11 60.1
MsG0480019150.01.T01 MTR_3g435310 36.283 113 58 5 65 173 203 305 8.88e-11 60.1
MsG0480019150.01.T01 MTR_8g006730 28.571 154 80 3 34 173 213 350 9.20e-11 60.1
MsG0480019150.01.T01 MTR_6g014250 30.818 159 96 6 14 170 217 363 9.73e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019150.01.T02 AT3G53160 56.944 144 59 2 3 145 215 356 1.86e-47 160
MsG0480019150.01.T02 AT2G36800 56.944 144 59 2 3 145 220 361 1.01e-46 158
MsG0480019150.01.T02 AT2G36760 56.944 144 59 2 3 145 221 362 7.41e-46 156
MsG0480019150.01.T02 AT2G36770 56.250 144 60 2 3 145 221 362 1.82e-45 155
MsG0480019150.01.T02 AT2G36750 55.556 144 61 2 3 145 216 357 2.94e-45 154
MsG0480019150.01.T02 AT2G36780 55.556 144 61 2 3 145 221 362 7.03e-45 153
MsG0480019150.01.T02 AT2G36790 55.556 144 61 2 3 145 220 361 2.38e-40 141
MsG0480019150.01.T02 AT3G53150 47.586 145 74 2 3 145 229 373 1.03e-39 140
MsG0480019150.01.T02 AT2G15480 41.667 144 80 3 3 145 221 361 5.30e-30 113
MsG0480019150.01.T02 AT2G15480 41.667 144 80 3 3 145 221 361 5.83e-30 113
MsG0480019150.01.T02 AT4G34138 42.069 145 78 5 3 145 221 361 8.26e-30 113
MsG0480019150.01.T02 AT4G34135 41.667 144 78 4 3 145 222 360 8.72e-30 113
MsG0480019150.01.T02 AT4G34131 42.361 144 78 4 3 145 221 360 1.64e-29 112
MsG0480019150.01.T02 AT2G15490 41.667 144 80 3 3 145 218 358 5.47e-28 108
MsG0480019150.01.T02 AT2G15490 42.177 147 78 5 3 145 218 361 1.49e-26 103
MsG0480019150.01.T02 AT1G73880 34.694 147 86 5 1 145 215 353 1.02e-20 87.8
MsG0480019150.01.T02 AT4G34135 39.823 113 65 2 3 114 222 332 2.37e-18 80.5
MsG0480019150.01.T02 AT1G51210 34.899 149 78 5 3 148 215 347 1.21e-16 76.3
MsG0480019150.01.T02 AT1G07250 36.364 143 77 6 5 143 221 353 8.17e-16 73.9
MsG0480019150.01.T02 AT1G01420 33.117 154 80 4 5 145 212 355 2.72e-15 72.4
MsG0480019150.01.T02 AT1G01420 33.117 154 80 4 5 145 209 352 2.74e-15 72.4
MsG0480019150.01.T02 AT5G12890 30.872 149 83 5 4 145 228 363 2.59e-14 69.3
MsG0480019150.01.T02 AT3G16520 31.788 151 83 7 3 145 209 347 3.43e-14 68.9
MsG0480019150.01.T02 AT3G16520 31.788 151 83 7 3 145 209 347 4.02e-14 68.9
MsG0480019150.01.T02 AT1G10400 32.639 144 77 7 3 142 216 343 4.17e-14 68.9
MsG0480019150.01.T02 AT3G16520 31.788 151 83 7 3 145 209 347 4.20e-14 68.9
MsG0480019150.01.T02 AT1G06000 34.868 152 84 7 3 145 175 320 4.59e-14 68.6
MsG0480019150.01.T02 AT5G03490 34.839 155 80 6 3 154 220 356 5.84e-14 68.6
MsG0480019150.01.T02 AT5G05860 32.374 139 81 4 6 142 206 333 9.81e-14 67.8
MsG0480019150.01.T02 AT5G49690 31.387 137 71 4 12 145 224 340 1.53e-13 67.4
MsG0480019150.01.T02 AT3G50740 30.000 160 76 6 5 142 208 353 1.90e-13 67.0
MsG0480019150.01.T02 AT3G46670 33.566 143 81 4 2 142 204 334 1.95e-13 67.0
MsG0480019150.01.T02 AT1G01390 32.468 154 81 4 5 145 209 352 2.43e-13 66.6
MsG0480019150.01.T02 AT1G01390 32.468 154 81 4 5 145 226 369 2.73e-13 66.6
MsG0480019150.01.T02 AT4G01070 33.775 151 77 4 5 142 209 349 2.95e-13 66.6
MsG0480019150.01.T02 AT5G66690 30.061 163 72 7 5 142 203 348 4.06e-13 66.2
MsG0480019150.01.T02 AT5G05870 27.857 140 89 4 6 143 212 341 5.47e-13 65.9
MsG0480019150.01.T02 AT5G26310 29.375 160 77 6 5 142 203 348 1.05e-12 64.7
MsG0480019150.01.T02 AT3G11340 33.333 144 82 5 2 142 198 330 1.12e-12 64.7
MsG0480019150.01.T02 AT1G78270 28.966 145 94 4 2 142 226 365 1.19e-12 64.7
MsG0480019150.01.T02 AT2G16890 32.414 145 75 9 3 142 219 345 3.00e-12 63.5
MsG0480019150.01.T02 AT2G26480 28.671 143 92 4 2 142 197 331 3.32e-12 63.5
MsG0480019150.01.T02 AT5G17030 28.261 138 84 4 6 143 219 341 3.78e-12 63.2
MsG0480019150.01.T02 AT1G22370 33.333 111 67 3 2 108 52 159 6.07e-12 62.4
MsG0480019150.01.T02 AT1G30530 28.873 142 84 4 2 143 212 336 6.58e-12 62.4
MsG0480019150.01.T02 AT1G22370 33.333 111 67 3 2 108 222 329 1.37e-11 61.6
MsG0480019150.01.T02 AT4G27570 31.655 139 82 3 7 145 205 330 1.42e-11 61.6
MsG0480019150.01.T02 AT4G15550 33.654 104 54 3 6 109 228 316 1.49e-11 61.6
MsG0480019150.01.T02 AT2G16890 32.414 145 75 9 3 142 219 345 2.76e-11 60.8
MsG0480019150.01.T02 AT5G17050 30.435 138 79 5 6 143 222 342 2.82e-11 60.8
MsG0480019150.01.T02 AT2G18570 29.747 158 82 7 3 145 205 348 3.28e-11 60.5
MsG0480019150.01.T02 AT5G59590 28.472 144 89 4 2 143 205 336 3.78e-11 60.5
MsG0480019150.01.T02 AT3G46680 27.778 144 90 4 2 143 205 336 4.72e-11 60.1
MsG0480019150.01.T02 AT1G64910 30.282 142 85 4 7 147 199 327 4.94e-11 60.1
MsG0480019150.01.T02 AT5G05880 28.777 139 86 5 6 142 207 334 5.00e-11 60.1
MsG0480019150.01.T02 AT2G31750 34.228 149 77 7 4 145 203 337 6.20e-11 59.7
MsG0480019150.01.T02 AT2G31750 34.228 149 77 7 4 145 203 337 7.50e-11 59.7
MsG0480019150.01.T02 AT1G22360 34.545 110 67 3 2 108 224 331 8.97e-11 59.3
MsG0480019150.01.T02 AT1G22360 34.545 110 67 3 2 108 224 331 9.08e-11 59.3
MsG0480019150.01.T02 AT5G53990 30.935 139 83 3 7 145 199 324 9.23e-11 59.3
MsG0480019150.01.T02 AT3G29630 35.652 115 69 3 31 145 217 326 9.24e-11 59.3
MsG0480019150.01.T02 AT5G59580 30.556 144 86 4 2 143 203 334 9.27e-11 59.3
MsG0480019150.01.T01 AT3G53160 54.430 158 69 2 17 173 201 356 4.80e-50 168
MsG0480019150.01.T01 AT2G36770 54.777 157 68 2 18 173 208 362 7.24e-49 165
MsG0480019150.01.T01 AT2G36800 54.140 157 69 2 18 173 207 361 5.35e-48 163
MsG0480019150.01.T01 AT2G36780 52.866 157 71 2 18 173 208 362 4.87e-47 160
MsG0480019150.01.T01 AT2G36760 53.503 157 70 2 18 173 208 362 8.22e-47 160
MsG0480019150.01.T01 AT2G36750 52.866 157 71 2 18 173 203 357 9.45e-47 159
MsG0480019150.01.T01 AT2G36790 53.049 164 74 2 11 173 200 361 7.53e-44 152
MsG0480019150.01.T01 AT3G53150 43.713 167 92 2 9 173 207 373 2.44e-41 145
MsG0480019150.01.T01 AT2G15480 39.873 158 91 3 17 173 207 361 2.06e-32 121
MsG0480019150.01.T01 AT2G15480 39.873 158 91 3 17 173 207 361 2.14e-32 121
MsG0480019150.01.T01 AT4G34138 40.252 159 89 5 17 173 207 361 2.43e-31 118
MsG0480019150.01.T01 AT4G34135 39.873 158 89 4 17 173 208 360 5.04e-31 117
MsG0480019150.01.T01 AT4G34131 39.873 158 90 4 17 173 207 360 6.31e-31 117
MsG0480019150.01.T01 AT2G15490 40.385 156 89 3 19 173 206 358 7.23e-30 114
MsG0480019150.01.T01 AT2G15490 40.881 159 87 5 19 173 206 361 1.58e-28 110
MsG0480019150.01.T01 AT1G73880 33.758 157 94 5 19 173 205 353 4.24e-21 89.7
MsG0480019150.01.T01 AT4G34135 37.795 127 76 2 17 142 208 332 1.89e-20 87.0
MsG0480019150.01.T01 AT1G51210 33.533 167 90 6 15 176 197 347 1.13e-16 77.0
MsG0480019150.01.T01 AT1G07250 33.728 169 94 7 7 171 199 353 1.43e-15 73.9
MsG0480019150.01.T01 AT5G05860 32.075 159 94 5 15 170 186 333 2.19e-15 73.6
MsG0480019150.01.T01 AT1G06000 33.939 165 94 7 18 173 162 320 2.57e-15 73.2
MsG0480019150.01.T01 AT5G03490 33.721 172 88 7 14 182 208 356 3.10e-15 73.2
MsG0480019150.01.T01 AT1G01420 33.117 154 80 4 33 173 212 355 4.59e-15 72.8
MsG0480019150.01.T01 AT1G01420 33.117 154 80 4 33 173 209 352 4.80e-15 72.4
MsG0480019150.01.T01 AT5G05870 27.545 167 108 5 8 171 185 341 1.57e-14 71.2
MsG0480019150.01.T01 AT3G46670 30.818 159 96 4 14 170 188 334 1.97e-14 70.9
MsG0480019150.01.T01 AT5G12890 30.872 149 83 5 32 173 228 363 3.58e-14 70.1
MsG0480019150.01.T01 AT3G16520 31.788 151 83 7 31 173 209 347 4.62e-14 69.7
MsG0480019150.01.T01 AT1G10400 32.639 144 77 7 31 170 216 343 5.47e-14 69.3
MsG0480019150.01.T01 AT3G16520 31.788 151 83 7 31 173 209 347 5.57e-14 69.3
MsG0480019150.01.T01 AT3G16520 31.788 151 83 7 31 173 209 347 6.11e-14 69.3
MsG0480019150.01.T01 AT5G49690 30.070 143 77 4 34 173 218 340 1.87e-13 67.8
MsG0480019150.01.T01 AT1G01390 32.468 154 81 4 33 173 209 352 3.51e-13 67.0
MsG0480019150.01.T01 AT1G01390 32.468 154 81 4 33 173 226 369 3.99e-13 67.0
MsG0480019150.01.T01 AT3G11340 32.000 150 88 5 24 170 192 330 9.69e-13 65.9
MsG0480019150.01.T01 AT4G01070 33.775 151 77 4 33 170 209 349 1.55e-12 65.5
MsG0480019150.01.T01 AT3G50740 28.931 159 79 5 33 170 208 353 1.81e-12 65.1
MsG0480019150.01.T01 AT5G05880 29.221 154 95 6 20 170 192 334 2.46e-12 64.7
MsG0480019150.01.T01 AT1G22370 32.258 124 77 3 17 136 39 159 2.57e-12 64.3
MsG0480019150.01.T01 AT1G78270 28.966 145 94 4 30 170 226 365 3.54e-12 64.3
MsG0480019150.01.T01 AT5G05900 27.848 158 96 5 15 170 192 333 3.57e-12 64.3
MsG0480019150.01.T01 AT2G29740 34.118 170 95 6 7 173 202 357 3.67e-12 64.3
MsG0480019150.01.T01 AT3G46680 26.316 171 109 5 3 171 181 336 4.57e-12 63.9
MsG0480019150.01.T01 AT2G26480 28.824 170 107 6 3 170 174 331 4.72e-12 63.9
MsG0480019150.01.T01 AT5G17030 28.261 138 84 4 34 171 219 341 4.88e-12 63.9
MsG0480019150.01.T01 AT2G16890 30.625 160 88 9 16 170 204 345 5.09e-12 63.9
MsG0480019150.01.T01 AT1G22370 32.258 124 77 3 17 136 209 329 5.45e-12 63.5
MsG0480019150.01.T01 AT5G66690 28.750 160 78 6 33 170 203 348 6.30e-12 63.5
MsG0480019150.01.T01 AT2G16890 30.625 160 88 9 16 170 204 345 6.48e-12 63.5
MsG0480019150.01.T01 AT2G18570 27.660 188 100 8 8 173 175 348 7.01e-12 63.5
MsG0480019150.01.T01 AT4G15550 33.333 123 65 4 17 137 209 316 7.58e-12 63.2
MsG0480019150.01.T01 AT5G26310 29.375 160 77 6 33 170 203 348 1.02e-11 62.8
MsG0480019150.01.T01 AT1G30530 28.873 142 84 4 30 171 212 336 1.16e-11 62.8
MsG0480019150.01.T01 AT3G55700 30.625 160 95 6 15 171 191 337 1.28e-11 62.8
MsG0480019150.01.T01 AT5G59590 27.848 158 99 5 16 171 192 336 1.82e-11 62.0
MsG0480019150.01.T01 AT4G27570 31.655 139 82 3 35 173 205 330 2.07e-11 62.0
MsG0480019150.01.T01 AT5G59580 28.125 160 101 4 14 171 187 334 3.53e-11 61.2
MsG0480019150.01.T01 AT5G17050 30.435 138 79 5 34 171 222 342 3.83e-11 61.2
MsG0480019150.01.T01 AT1G64910 29.375 160 98 5 18 175 181 327 4.77e-11 60.8
MsG0480019150.01.T01 AT1G22360 34.513 113 69 3 27 136 221 331 6.04e-11 60.8
MsG0480019150.01.T01 AT1G22360 34.513 113 69 3 27 136 221 331 6.63e-11 60.5
MsG0480019150.01.T01 AT3G46700 25.150 167 98 3 14 171 183 331 7.98e-11 60.5
MsG0480019150.01.T01 AT3G55710 30.120 166 102 6 11 171 185 341 8.40e-11 60.1

Find 46 sgRNAs with CRISPR-Local

Find 53 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTAGAGGCCTAGTAATTA+AGG 0.254407 4:-15072417 MsG0480019150.01.T01:CDS
AGATTAGAAATGACAAAGTT+TGG 0.331276 4:-15072739 MsG0480019150.01.T01:CDS
TCTCTAATAACCCAAATAAA+AGG 0.343882 4:+15072503 None:intergenic
GGATATACTTGAAGCTGAAA+TGG 0.374963 4:-15072825 MsG0480019150.01.T01:CDS
ATCCTCATTAAATTGTTTCA+AGG 0.376454 4:+15072844 None:intergenic
ACTTAGTAACACTGATTACT+TGG 0.379817 4:-15072699 MsG0480019150.01.T01:CDS
GAAGCTGAAATGGGTAGTTA+TGG 0.395187 4:-15072815 MsG0480019150.01.T01:CDS
AATGACAAAGTTTGGTGTAT+AGG 0.398133 4:-15072731 MsG0480019150.01.T01:CDS
TTCAAGTCCCTTACATATGT+TGG 0.399868 4:+15072764 None:intergenic
ATTGAGGAGAGTGGATTTGA+GGG 0.399917 4:-15072449 MsG0480019150.01.T01:CDS
TAACACTGATTACTTGGATA+AGG 0.404487 4:-15072693 MsG0480019150.01.T01:CDS
ACCCTAGTCCTGTTTGTGCT+AGG 0.406283 4:+15072885 None:intergenic
GATTTGTCACATCCTGCAAT+TGG 0.413883 4:-15072375 MsG0480019150.01.T01:CDS
ACTAGGGTCAACAAAGGTTA+TGG 0.429662 4:-15072870 MsG0480019150.01.T01:CDS
AAGCTGAAATGGGTAGTTAT+GGG 0.442213 4:-15072814 MsG0480019150.01.T01:CDS
CCCTAGTCCTGTTTGTGCTA+GGG 0.460150 4:+15072886 None:intergenic
AGTTAGAGCCAACATATGTA+AGG 0.466189 4:-15072772 MsG0480019150.01.T01:CDS
AGGCCTAGTAATTAAGGGTT+GGG 0.471377 4:-15072411 MsG0480019150.01.T01:CDS
GGATTTGAGGGAAGAATCAA+TGG 0.478326 4:-15072437 MsG0480019150.01.T01:CDS
GATTGAGGAGAGTGGATTTG+AGG 0.479965 4:-15072450 MsG0480019150.01.T01:CDS
GATATACTTGAAGCTGAAAT+GGG 0.488641 4:-15072824 MsG0480019150.01.T01:CDS
GGGCCCAACCCTTAATTACT+AGG 0.488851 4:+15072408 None:intergenic
GAAATGACCCTAGCACAAAC+AGG 0.490631 4:-15072893 MsG0480019150.01.T01:CDS
GAAGTGGCTAAATTCTCATA+AGG 0.494972 4:-15072621 MsG0480019150.01.T01:CDS
GGTAGAGGCCTAGTAATTAA+GGG 0.495542 4:-15072416 MsG0480019150.01.T01:CDS
TCAGTGTTACTAAGTGATAC+AGG 0.497841 4:+15072707 None:intergenic
AGCCTTGAAACAATTTAATG+AGG 0.509352 4:-15072846 MsG0480019150.01.T01:CDS
TTGTCACATCCTGCAATTGG+AGG 0.521043 4:-15072372 MsG0480019150.01.T01:CDS
TTTATTTGGGTTATTAGAGA+GGG 0.535220 4:-15072500 MsG0480019150.01.T01:CDS
CCACCACAGTTGATAGAGCT+AGG 0.542078 4:-15072551 MsG0480019150.01.T01:CDS
TTAGATTACATAAACTTCCA+AGG 0.551921 4:+15072576 None:intergenic
ACCCTAGCACAAACAGGACT+AGG 0.553952 4:-15072887 MsG0480019150.01.T01:CDS
GAGGCCTAGTAATTAAGGGT+TGG 0.554653 4:-15072412 MsG0480019150.01.T01:CDS
AGTGTTATATATGCAAACCT+TGG 0.557256 4:-15072593 MsG0480019150.01.T01:CDS
GAGGGAAGAATCAATGGTAG+AGG 0.568339 4:-15072431 MsG0480019150.01.T01:CDS
CCCTAGCACAAACAGGACTA+GGG 0.604808 4:-15072886 MsG0480019150.01.T01:CDS
TACTTGGATAAGGTTCAAAG+AGG 0.615880 4:-15072683 MsG0480019150.01.T01:CDS
TGTGACAAATCAATAACTGA+GGG 0.618105 4:+15072387 None:intergenic
GTTAGAGCCAACATATGTAA+GGG 0.620691 4:-15072771 MsG0480019150.01.T01:CDS
CACCACAGTTGATAGAGCTA+GGG 0.621125 4:-15072550 MsG0480019150.01.T01:CDS
CCTAGCTCTATCAACTGTGG+TGG 0.636929 4:+15072551 None:intergenic
ATGAATGGAAGCACTTGAAG+TGG 0.663535 4:-15072637 MsG0480019150.01.T01:CDS
ATGTGACAAATCAATAACTG+AGG 0.672939 4:+15072386 None:intergenic
AACCCTAGCTCTATCAACTG+TGG 0.685229 4:+15072548 None:intergenic
AACAGGACTAGGGTCAACAA+AGG 0.692624 4:-15072876 MsG0480019150.01.T01:CDS
GTGACAAATCAATAACTGAG+GGG 0.751772 4:+15072388 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACAAAAAGACCTTTTATTT+GGG - Chr4:15072741-15072760 MsG0480019150.01.T01:CDS 20.0%
! AGATTAGAAATGACAAAGTT+TGG - Chr4:15072515-15072534 MsG0480019150.01.T01:CDS 25.0%
! AGTTAGAAGAGTTGAAAAAA+TGG - Chr4:15072782-15072801 MsG0480019150.01.T01:CDS 25.0%
! ATCCTCATTAAATTGTTTCA+AGG + Chr4:15072413-15072432 None:intergenic 25.0%
! TCTCTAATAACCCAAATAAA+AGG + Chr4:15072754-15072773 None:intergenic 25.0%
! TTAGATTACATAAACTTCCA+AGG + Chr4:15072681-15072700 None:intergenic 25.0%
!! CAACAAAAAGACCTTTTATT+TGG - Chr4:15072740-15072759 MsG0480019150.01.T01:CDS 25.0%
!! TTTATTTGGGTTATTAGAGA+GGG - Chr4:15072754-15072773 MsG0480019150.01.T01:CDS 25.0%
!!! ACAAAGTTTTAGTTGATGAA+TGG - Chr4:15072602-15072621 MsG0480019150.01.T01:CDS 25.0%
!!! TTTTATTTGGGTTATTAGAG+AGG - Chr4:15072753-15072772 MsG0480019150.01.T01:CDS 25.0%
AGCCTTGAAACAATTTAATG+AGG - Chr4:15072408-15072427 MsG0480019150.01.T01:CDS 30.0%
AGTGTTATATATGCAAACCT+TGG - Chr4:15072661-15072680 MsG0480019150.01.T01:CDS 30.0%
ATGTGACAAATCAATAACTG+AGG + Chr4:15072871-15072890 None:intergenic 30.0%
GATATACTTGAAGCTGAAAT+GGG - Chr4:15072430-15072449 MsG0480019150.01.T01:CDS 30.0%
TGTGACAAATCAATAACTGA+GGG + Chr4:15072870-15072889 None:intergenic 30.0%
! ACTTAGTAACACTGATTACT+TGG - Chr4:15072555-15072574 MsG0480019150.01.T01:CDS 30.0%
! TAACACTGATTACTTGGATA+AGG - Chr4:15072561-15072580 MsG0480019150.01.T01:CDS 30.0%
! TGGGATAATCACAAATTTTG+AGG - Chr4:15072459-15072478 MsG0480019150.01.T01:CDS 30.0%
!! AATGACAAAGTTTGGTGTAT+AGG - Chr4:15072523-15072542 MsG0480019150.01.T01:CDS 30.0%
!! AGAGTTGAAAAAATGGATTG+AGG - Chr4:15072789-15072808 MsG0480019150.01.T01:CDS 30.0%
AAGCTGAAATGGGTAGTTAT+GGG - Chr4:15072440-15072459 MsG0480019150.01.T01:CDS 35.0%
AGTTAGAGCCAACATATGTA+AGG - Chr4:15072482-15072501 MsG0480019150.01.T01:CDS 35.0%
GAAGTGGCTAAATTCTCATA+AGG - Chr4:15072633-15072652 MsG0480019150.01.T01:CDS 35.0%
GGATATACTTGAAGCTGAAA+TGG - Chr4:15072429-15072448 MsG0480019150.01.T01:CDS 35.0%
GTGACAAATCAATAACTGAG+GGG + Chr4:15072869-15072888 None:intergenic 35.0%
GTTAGAGCCAACATATGTAA+GGG - Chr4:15072483-15072502 MsG0480019150.01.T01:CDS 35.0%
TACTTGGATAAGGTTCAAAG+AGG - Chr4:15072571-15072590 MsG0480019150.01.T01:CDS 35.0%
TTCAAGTCCCTTACATATGT+TGG + Chr4:15072493-15072512 None:intergenic 35.0%
! TCAGTGTTACTAAGTGATAC+AGG + Chr4:15072550-15072569 None:intergenic 35.0%
!! AAAAAATGGATTGAGGAGAG+TGG - Chr4:15072796-15072815 MsG0480019150.01.T01:CDS 35.0%
ACTAGGGTCAACAAAGGTTA+TGG - Chr4:15072384-15072403 MsG0480019150.01.T01:CDS 40.0%
AGGCCTAGTAATTAAGGGTT+GGG - Chr4:15072843-15072862 MsG0480019150.01.T01:CDS 40.0%
GAAGCTGAAATGGGTAGTTA+TGG - Chr4:15072439-15072458 MsG0480019150.01.T01:CDS 40.0%
GATTTGTCACATCCTGCAAT+TGG - Chr4:15072879-15072898 MsG0480019150.01.T01:CDS 40.0%
GGATTTGAGGGAAGAATCAA+TGG - Chr4:15072817-15072836 MsG0480019150.01.T01:CDS 40.0%
GGTAGAGGCCTAGTAATTAA+GGG - Chr4:15072838-15072857 MsG0480019150.01.T01:CDS 40.0%
TGGTAGAGGCCTAGTAATTA+AGG - Chr4:15072837-15072856 MsG0480019150.01.T01:CDS 40.0%
! ATTGAGGAGAGTGGATTTGA+GGG - Chr4:15072805-15072824 MsG0480019150.01.T01:CDS 40.0%
!! ATGAATGGAAGCACTTGAAG+TGG - Chr4:15072617-15072636 MsG0480019150.01.T01:CDS 40.0%
AACAGGACTAGGGTCAACAA+AGG - Chr4:15072378-15072397 MsG0480019150.01.T01:CDS 45.0%
GAGGCCTAGTAATTAAGGGT+TGG - Chr4:15072842-15072861 MsG0480019150.01.T01:CDS 45.0%
GAGGGAAGAATCAATGGTAG+AGG - Chr4:15072823-15072842 MsG0480019150.01.T01:CDS 45.0%
TTGTCACATCCTGCAATTGG+AGG - Chr4:15072882-15072901 MsG0480019150.01.T01:CDS 45.0%
! GATTGAGGAGAGTGGATTTG+AGG - Chr4:15072804-15072823 MsG0480019150.01.T01:CDS 45.0%
!! AACCCTAGCTCTATCAACTG+TGG + Chr4:15072709-15072728 None:intergenic 45.0%
!! CACCACAGTTGATAGAGCTA+GGG - Chr4:15072704-15072723 MsG0480019150.01.T01:CDS 45.0%
ACCCTAGCACAAACAGGACT+AGG - Chr4:15072367-15072386 MsG0480019150.01.T01:CDS 50.0%
ACCCTAGTCCTGTTTGTGCT+AGG + Chr4:15072372-15072391 None:intergenic 50.0%
CCCTAGCACAAACAGGACTA+GGG - Chr4:15072368-15072387 MsG0480019150.01.T01:CDS 50.0%
CCCTAGTCCTGTTTGTGCTA+GGG + Chr4:15072371-15072390 None:intergenic 50.0%
GGGCCCAACCCTTAATTACT+AGG + Chr4:15072849-15072868 None:intergenic 50.0%
!! CCACCACAGTTGATAGAGCT+AGG - Chr4:15072703-15072722 MsG0480019150.01.T01:CDS 50.0%
!! CCTAGCTCTATCAACTGTGG+TGG + Chr4:15072706-15072725 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
Chr4 gene 15072364 15072912 15072364 ID=MsG0480019150.01;Name=MsG0480019150.01
Chr4 mRNA 15072364 15072912 15072364 ID=MsG0480019150.01.T01;Parent=MsG0480019150.01;Name=MsG0480019150.01.T01;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|0|1|0|182
Chr4 exon 15072364 15072912 15072364 ID=MsG0480019150.01.T01:exon:4043;Parent=MsG0480019150.01.T01
Chr4 CDS 15072364 15072912 15072364 ID=MsG0480019150.01.T01:cds;Parent=MsG0480019150.01.T01
Chr4 mRNA 15072364 15072828 15072364 ID=MsG0480019150.01.T02;Parent=MsG0480019150.01;Name=MsG0480019150.01.T02;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|0|1|0|154
Chr4 exon 15072364 15072828 15072364 ID=MsG0480019150.01.T02:exon:4044;Parent=MsG0480019150.01.T02
Chr4 CDS 15072364 15072828 15072364 ID=MsG0480019150.01.T02:cds;Parent=MsG0480019150.01.T02
Gene Sequence

>MsG0480019150.01.T02

ATGGGTAGTTATGGGATAATCACAAATTTTGAGGAGTTAGAGCCAACATATGTAAGGGACTTGAAAAAGATTAGAAATGACAAAGTTTGGTGTATAGGACCTGTATCACTTAGTAACACTGATTACTTGGATAAGGTTCAAAGAGGTGATAGTAACAAAGTTTTAGTTGATGAATGGAAGCACTTGAAGTGGCTAAATTCTCATAAGGATGAGAGTGTTATATATGCAAACCTTGGAAGTTTATGTAATCTAACACCACCACAGTTGATAGAGCTAGGGTTAGCATTAGAAGCAACAAAAAGACCTTTTATTTGGGTTATTAGAGAGGGAAATCAGTTAGAAGAGTTGAAAAAATGGATTGAGGAGAGTGGATTTGAGGGAAGAATCAATGGTAGAGGCCTAGTAATTAAGGGTTGGGCCCCTCAGTTATTGATTTGTCACATCCTGCAATTGGAGGATTTTTGA

>MsG0480019150.01.T01

ATGACCCTAGCACAAACAGGACTAGGGTCAACAAAGGTTATGGAAGCCTTGAAACAATTTAATGAGGATATACTTGAAGCTGAAATGGGTAGTTATGGGATAATCACAAATTTTGAGGAGTTAGAGCCAACATATGTAAGGGACTTGAAAAAGATTAGAAATGACAAAGTTTGGTGTATAGGACCTGTATCACTTAGTAACACTGATTACTTGGATAAGGTTCAAAGAGGTGATAGTAACAAAGTTTTAGTTGATGAATGGAAGCACTTGAAGTGGCTAAATTCTCATAAGGATGAGAGTGTTATATATGCAAACCTTGGAAGTTTATGTAATCTAACACCACCACAGTTGATAGAGCTAGGGTTAGCATTAGAAGCAACAAAAAGACCTTTTATTTGGGTTATTAGAGAGGGAAATCAGTTAGAAGAGTTGAAAAAATGGATTGAGGAGAGTGGATTTGAGGGAAGAATCAATGGTAGAGGCCTAGTAATTAAGGGTTGGGCCCCTCAGTTATTGATTTGTCACATCCTGCAATTGGAGGATTTTTGA

Protein sequence

>MsG0480019150.01.T02

MGSYGIITNFEELEPTYVRDLKKIRNDKVWCIGPVSLSNTDYLDKVQRGDSNKVLVDEWKHLKWLNSHKDESVIYANLGSLCNLTPPQLIELGLALEATKRPFIWVIREGNQLEELKKWIEESGFEGRINGRGLVIKGWAPQLLICHILQLEDF*

>MsG0480019150.01.T01

MTLAQTGLGSTKVMEALKQFNEDILEAEMGSYGIITNFEELEPTYVRDLKKIRNDKVWCIGPVSLSNTDYLDKVQRGDSNKVLVDEWKHLKWLNSHKDESVIYANLGSLCNLTPPQLIELGLALEATKRPFIWVIREGNQLEELKKWIEESGFEGRINGRGLVIKGWAPQLLICHILQLEDF*