AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014909.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014909.01.T01 MTR_3g031360 97.087 309 8 1 1 308 1 309 0.0 620
MsG0380014909.01.T01 MTR_1g022030 35.789 285 163 6 30 308 235 505 2.13e-45 161
MsG0380014909.01.T01 MTR_5g019790 38.672 256 135 7 61 308 206 447 1.49e-44 157
MsG0380014909.01.T01 MTR_2g008590 32.836 268 146 9 51 305 1007 1253 1.07e-26 110
MsG0380014909.01.T01 MTR_2g095720 91.892 37 3 0 173 209 4 40 3.02e-17 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014909.01.T01 AT2G30170 64.014 289 99 3 23 308 12 298 2.45e-131 375
MsG0380014909.01.T01 AT2G30170 67.873 221 70 1 89 308 1 221 1.46e-110 320
MsG0380014909.01.T01 AT2G30170 63.319 229 79 3 23 248 12 238 1.62e-96 286
MsG0380014909.01.T01 AT2G30170 69.744 195 58 1 55 248 9 203 8.90e-96 283
MsG0380014909.01.T01 AT2G30170 63.684 190 65 2 23 210 12 199 1.17e-79 241
MsG0380014909.01.T01 AT2G30170 67.089 158 51 1 152 308 1 158 5.92e-77 232
MsG0380014909.01.T01 AT2G30170 68.323 161 50 1 89 248 1 161 8.70e-76 230
MsG0380014909.01.T01 AT4G16580 40.945 254 131 5 61 308 221 461 8.93e-52 177
MsG0380014909.01.T01 AT5G66720 33.013 312 176 6 4 308 126 411 3.69e-49 169
MsG0380014909.01.T01 AT5G66720 33.758 314 174 7 4 308 126 414 1.70e-48 167
MsG0380014909.01.T01 AT4G33500 34.000 250 142 9 61 303 484 717 1.04e-31 125

Find 129 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGATGTTGTACATAATATT+TGG 0.167472 3:+62309117 MsG0380014909.01.T01:three_prime_UTR
GAAATTTATGATTGATATTT+AGG 0.196120 3:+62309373 MsG0380014909.01.T01:three_prime_UTR
ATAATTACTATTACCTTCTT+TGG 0.201227 3:-62305537 None:intergenic
CCTTCTTTGGATGTGGAATA+AGG 0.216708 3:-62305524 None:intergenic
TAGTCCTCATCATTTATATC+TGG 0.219980 3:-62309595 None:intergenic
ATTGCATGCTAATCCTTTCT+TGG 0.253197 3:-62309479 None:intergenic
CAGAACTTAACCCTGTAATT+AGG 0.255765 3:+62305378 MsG0380014909.01.T01:CDS
GAGTTTACTAACCTAATTAC+AGG 0.316589 3:-62305389 None:intergenic
TTTACATTGTTGTACCTTGC+TGG 0.320462 3:+62309752 MsG0380014909.01.T01:three_prime_UTR
GCTGTCGCTGATGGTGTCTC+TGG 0.320949 3:+62305685 MsG0380014909.01.T01:CDS
ATTATTCCCACGTGAATTGA+TGG 0.323223 3:+62306442 MsG0380014909.01.T01:CDS
CCAAATGCCTTGTTCGAGAT+TGG 0.343447 3:-62309529 None:intergenic
CCATGGTGGAAGAAAGTTCT+TGG 0.345245 3:+62308720 MsG0380014909.01.T01:CDS
CCAATCTCGAACAAGGCATT+TGG 0.352763 3:+62309529 MsG0380014909.01.T01:three_prime_UTR
TTCTTTGTGAGTAACTATAA+TGG 0.353613 3:+62305652 MsG0380014909.01.T01:CDS
CCATTGCATCAAGGTATGTT+TGG 0.361695 3:-62307174 None:intergenic
CTATTGATGAAAATGCTAAA+AGG 0.368498 3:+62305324 MsG0380014909.01.T01:CDS
ATGATCCGCAGATTCTTATA+AGG 0.378510 3:+62306717 MsG0380014909.01.T01:CDS
TTCAATATTGAGAGCTGTAA+TGG 0.381901 3:+62305253 MsG0380014909.01.T01:CDS
TATTACTGTAATTGTTGGTC+AGG 0.384653 3:+62308851 MsG0380014909.01.T01:CDS
CTCTCAGAGCTCAGTTGGTA+TGG 0.396619 3:-62307145 None:intergenic
GGTAAGTAATGTGGAGTTGA+TGG 0.402055 3:+62308091 MsG0380014909.01.T01:intron
AACATGAGATATTACCATTA+CGG 0.404411 3:-62306983 None:intergenic
CAACGGTTAGAGCAATTTCA+TGG 0.406391 3:-62308166 None:intergenic
GATGATATTACTGTAATTGT+TGG 0.415329 3:+62308846 MsG0380014909.01.T01:CDS
TTACATTGTTGTACCTTGCT+GGG 0.421673 3:+62309753 MsG0380014909.01.T01:three_prime_UTR
AGCAAAGGCATTAGCTAACT+TGG 0.423045 3:+62308298 MsG0380014909.01.T01:intron
CTCTGGTGATCTTAACAATC+AGG 0.429033 3:-62308934 None:intergenic
AGTCCTCATCATTTATATCT+GGG 0.449732 3:-62309594 None:intergenic
GGCCACAGGCAGGAAAACTA+TGG 0.456617 3:-62309458 None:intergenic
TTCCTGCCTGTGGCCAAGAA+AGG 0.459337 3:+62309466 MsG0380014909.01.T01:three_prime_UTR
ACTATTACCTTCTTTGGATG+TGG 0.460067 3:-62305531 None:intergenic
AACAAAGATGTTTCTGAGGC+TGG 0.460161 3:+62308191 MsG0380014909.01.T01:CDS
TTTATGATTGATATTTAGGC+GGG 0.466720 3:+62309377 MsG0380014909.01.T01:three_prime_UTR
ATTGCCAATGTTGGTGATTG+TGG 0.466988 3:+62306948 MsG0380014909.01.T01:CDS
ACTTAAGGCAACTCCTTCTC+TGG 0.471321 3:-62308951 None:intergenic
CCTTATTCCACATCCAAAGA+AGG 0.477864 3:+62305524 MsG0380014909.01.T01:CDS
GCCCTTGCCTCCAATGAATA+CGG 0.481855 3:-62308356 None:intergenic
GTGAAGCATCATTGCTATGC+TGG 0.481916 3:+62306905 MsG0380014909.01.T01:intron
TTGCTATGCTGGAAAAGAAT+GGG 0.485820 3:+62306916 MsG0380014909.01.T01:CDS
AGAGGGAGTTGAAGTTAAAG+TGG 0.490977 3:+62305216 MsG0380014909.01.T01:five_prime_UTR
CATGGTGGAAGAAAGTTCTT+GGG 0.496365 3:+62308721 MsG0380014909.01.T01:CDS
ACAATTGTCATGGGATCTGA+TGG 0.498716 3:+62308122 MsG0380014909.01.T01:CDS
TTAGTGCCACGGTATACTTA+AGG 0.503627 3:-62308966 None:intergenic
ATTGCTATGCTGGAAAAGAA+TGG 0.507571 3:+62306915 MsG0380014909.01.T01:CDS
GCTAATCCTTTCTTGGCCAC+AGG 0.507617 3:-62309472 None:intergenic
GCTTCACAGTTGGGCTGAAG+AGG 0.508097 3:+62306406 MsG0380014909.01.T01:intron
AGAAGCATATTGTATAGTAA+AGG 0.508758 3:-62309238 None:intergenic
GGATTACGAGTTATCCGTAA+TGG 0.510558 3:+62306969 MsG0380014909.01.T01:CDS
ATGAAGCTCTACATACTTCA+CGG 0.511085 3:-62309040 None:intergenic
ATCCTTTCTTGGCCACAGGC+AGG 0.512845 3:-62309468 None:intergenic
TTTCACTGCAATTTATATGC+GGG 0.516940 3:-62309726 None:intergenic
TGATTCTCCGTATTCATTGG+AGG 0.517203 3:+62308349 MsG0380014909.01.T01:CDS
AATTCACGTGGGAATAATGA+AGG 0.517953 3:-62306437 None:intergenic
CTCCGTATTCATTGGAGGCA+AGG 0.518397 3:+62308354 MsG0380014909.01.T01:CDS
TTGTGAAGGTTGAGAAAGGT+GGG 0.518923 3:+62305620 MsG0380014909.01.T01:intron
CTGTCGCTGATGGTGTCTCT+GGG 0.523230 3:+62305686 MsG0380014909.01.T01:CDS
AGGCAAGTCATCGATTCAAA+AGG 0.524628 3:+62309690 MsG0380014909.01.T01:three_prime_UTR
GGAGTTATTGCTGTCGCTGA+TGG 0.528845 3:+62305676 MsG0380014909.01.T01:CDS
TTTGTGAAGGTTGAGAAAGG+TGG 0.532355 3:+62305619 MsG0380014909.01.T01:intron
TCCGTATTCATTGGAGGCAA+GGG 0.535770 3:+62308355 MsG0380014909.01.T01:CDS
TATACCGTGGCACTAAACTT+TGG 0.536254 3:+62308973 MsG0380014909.01.T01:three_prime_UTR
ATCTCGAACAAGGCATTTGG+TGG 0.540751 3:+62309532 MsG0380014909.01.T01:three_prime_UTR
GTAATGTTCTTGTGGAGAAG+TGG 0.542397 3:-62307113 None:intergenic
TATGATTGATATTTAGGCGG+GGG 0.542401 3:+62309379 MsG0380014909.01.T01:three_prime_UTR
CAACCCTCTCAGAGCTCAGT+TGG 0.543171 3:-62307150 None:intergenic
GAGTTGAAGTTAAAGTGGTA+AGG 0.543527 3:+62305221 MsG0380014909.01.T01:five_prime_UTR
GAAGTTAAAGTGGTAAGGAA+TGG 0.545965 3:+62305226 MsG0380014909.01.T01:exon
GTTCTTGGGATGAAGTTGAC+AGG 0.546334 3:+62308735 MsG0380014909.01.T01:CDS
GGAAGGAGACACAATTGTCA+TGG 0.550201 3:+62308112 MsG0380014909.01.T01:CDS
TGTGTGAATGTGAAGGATAG+AGG 0.551598 3:+62305198 None:intergenic
TTGTTTGCCAATCTCGAACA+AGG 0.551614 3:+62309522 MsG0380014909.01.T01:three_prime_UTR
TAAAGGCATTCAGCTTACAT+TGG 0.551771 3:-62309221 None:intergenic
AGAAACATCTTTGTTTGCAA+CGG 0.553090 3:-62308183 None:intergenic
CATGCTGCTACATTCTCTAC+AGG 0.556023 3:+62306746 MsG0380014909.01.T01:CDS
GTGTTTGTGAAGGTTGAGAA+AGG 0.557244 3:+62305616 MsG0380014909.01.T01:intron
TTTGTGAGTAACTATAATGG+TGG 0.557472 3:+62305655 MsG0380014909.01.T01:CDS
CAGTCAAAGTAATGTTCTTG+TGG 0.563107 3:-62307121 None:intergenic
TCTCAGAGCTCAGTTGGTAT+GGG 0.569458 3:-62307144 None:intergenic
GCAAAGCAAGAGAACTTCCA+TGG 0.570066 3:-62309018 None:intergenic
TAAATGTTACCATTGCATCA+AGG 0.570236 3:-62307183 None:intergenic
AATCTAAAGATTGCCAATGT+TGG 0.572338 3:+62306939 MsG0380014909.01.T01:CDS
TACATAATATTTGGAACCAG+TGG 0.574189 3:+62309126 MsG0380014909.01.T01:three_prime_UTR
ATTTCACTGCAATTTATATG+CGG 0.574645 3:-62309727 None:intergenic
TTAGCATGCAATGAATCCTC+CGG 0.579159 3:+62309490 MsG0380014909.01.T01:three_prime_UTR
AGTAATGTGGAGTTGATGGA+AGG 0.579559 3:+62308095 MsG0380014909.01.T01:CDS
ATTTATGATTGATATTTAGG+CGG 0.582269 3:+62309376 MsG0380014909.01.T01:three_prime_UTR
TTTACTTTATAGGTCATCAG+AGG 0.586977 3:+62305479 MsG0380014909.01.T01:intron
ATGATATGAAGAATCCGTGA+TGG 0.589363 3:+62309402 MsG0380014909.01.T01:three_prime_UTR
TGGCAAACAATTGCAACCAC+CGG 0.589544 3:-62309509 None:intergenic
CCAAACATACCTTGATGCAA+TGG 0.590788 3:+62307174 MsG0380014909.01.T01:CDS
TTCATTGGAGGCAAGGGCCA+AGG 0.591316 3:+62308361 MsG0380014909.01.T01:CDS
CTTGGCAAACAGTCATGCAA+TGG 0.591819 3:+62308316 MsG0380014909.01.T01:CDS
ACTATGTCACGTGCTTCAGA+TGG 0.594497 3:+62309614 MsG0380014909.01.T01:three_prime_UTR
CCAAGAACTTTCTTCCACCA+TGG 0.595236 3:-62308720 None:intergenic
GAAGGAGACACAATTGTCAT+GGG 0.599986 3:+62308113 MsG0380014909.01.T01:CDS
ATTGTTAAGATCACCAGAGA+AGG 0.600071 3:+62308938 MsG0380014909.01.T01:three_prime_UTR
TAATCCACAATCACCAACAT+TGG 0.602187 3:-62306952 None:intergenic
GTGTGAATGTGAAGGATAGA+GGG 0.603159 3:+62305199 None:intergenic
AAGGTTACTTGACAGCCGAC+AGG 0.603644 3:+62309425 MsG0380014909.01.T01:three_prime_UTR
TACATTGTTGTACCTTGCTG+GGG 0.603977 3:+62309754 MsG0380014909.01.T01:three_prime_UTR
AAACAAAAGTTTCCCCAGCA+AGG 0.608692 3:-62309766 None:intergenic
ACACACACAATTACACAACA+TGG 0.609612 3:+62309283 MsG0380014909.01.T01:three_prime_UTR
AAGTTAAACATCATCTCAGA+AGG 0.614605 3:-62309645 None:intergenic
CAACTGAGCTCTGAGAGGGT+TGG 0.619782 3:+62307151 MsG0380014909.01.T01:CDS
TGCAAACAAAGATGTTTCTG+AGG 0.619881 3:+62308187 MsG0380014909.01.T01:CDS
TATGAAGAATCCGTGATGGA+AGG 0.622255 3:+62309406 MsG0380014909.01.T01:three_prime_UTR
AGTTTACTAACCTAATTACA+GGG 0.624096 3:-62305388 None:intergenic
TTATGATTGATATTTAGGCG+GGG 0.627535 3:+62309378 MsG0380014909.01.T01:three_prime_UTR
GAACAAGGCATTTGGTGGCA+CGG 0.628071 3:+62309537 MsG0380014909.01.T01:three_prime_UTR
ATACCAACTGAGCTCTGAGA+GGG 0.631786 3:+62307147 MsG0380014909.01.T01:CDS
TTGATGAAAATGCTAAAAGG+AGG 0.632849 3:+62305327 MsG0380014909.01.T01:CDS
TATGGATGAATAGTACCTGT+CGG 0.633236 3:-62309440 None:intergenic
ATGACCAAAGTTTAGTGCCA+CGG 0.636017 3:-62308977 None:intergenic
AAACCCAGATATAAATGATG+AGG 0.636236 3:+62309591 MsG0380014909.01.T01:three_prime_UTR
CTGTTGCAATTTGTATGCAG+AGG 0.639305 3:+62309670 MsG0380014909.01.T01:three_prime_UTR
ATCAATCATAAATTTCACAA+TGG 0.640851 3:-62309366 None:intergenic
CAATTGTCATGGGATCTGAT+GGG 0.648322 3:+62308123 MsG0380014909.01.T01:CDS
GCATTAGCCATCAATTCACG+TGG 0.652412 3:-62306449 None:intergenic
CAAACAATTGCAACCACCGG+AGG 0.652456 3:-62309506 None:intergenic
ATTATGCTGTAAAGAAAACA+AGG 0.653479 3:+62308910 MsG0380014909.01.T01:three_prime_UTR
CATACCAACTGAGCTCTGAG+AGG 0.655681 3:+62307146 MsG0380014909.01.T01:CDS
GAAGATATGTTATGAATGTG+TGG 0.660697 3:-62305302 None:intergenic
TGTGAAGGTTGAGAAAGGTG+GGG 0.664939 3:+62305621 MsG0380014909.01.T01:intron
GCTTTCCTTATAAGAATCTG+CGG 0.664957 3:-62306722 None:intergenic
TGTCAAGTAACCTTCCATCA+CGG 0.667403 3:-62309416 None:intergenic
GCATGCAATGAATCCTCCGG+TGG 0.679832 3:+62309493 MsG0380014909.01.T01:three_prime_UTR
CATTAGCCATCAATTCACGT+GGG 0.738708 3:-62306448 None:intergenic
GAGTTGCCTTAAGTATACCG+TGG 0.746869 3:+62308960 MsG0380014909.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTTGTTTATCATATA+AGG - Chr3:62306001-62306020 None:intergenic 10.0%
!! TAGCAAATATAATATTATTT+CGG - Chr3:62306537-62306556 None:intergenic 10.0%
!! TATATTTGTTTATCATATAA+GGG - Chr3:62306000-62306019 None:intergenic 10.0%
!! CATACACAAATTTAAATATA+AGG - Chr3:62307303-62307322 None:intergenic 15.0%
!! GAAATTTATGATTGATATTT+AGG + Chr3:62309373-62309392 MsG0380014909.01.T01:three_prime_UTR 15.0%
!!! CTATTTTATCAAATTATTAC+CGG - Chr3:62307694-62307713 None:intergenic 15.0%
!!! TAATGCTTAATACTTTTTTT+AGG + Chr3:62305432-62305451 MsG0380014909.01.T01:intron 15.0%
!! AATATGATAACACATAACTT+GGG - Chr3:62307958-62307977 None:intergenic 20.0%
!! ATAATTACTATTACCTTCTT+TGG - Chr3:62305540-62305559 None:intergenic 20.0%
!! ATCAATCATAAATTTCACAA+TGG - Chr3:62309369-62309388 None:intergenic 20.0%
!! ATTTATGATTGATATTTAGG+CGG + Chr3:62309376-62309395 MsG0380014909.01.T01:three_prime_UTR 20.0%
!! GAAAATAATAACAAAGAAAC+TGG - Chr3:62307855-62307874 None:intergenic 20.0%
!! GTAATATCTCATGTTATAAA+AGG + Chr3:62306991-62307010 MsG0380014909.01.T01:intron 20.0%
!!! AAGTTTATCCTCTTTTATTT+AGG + Chr3:62306783-62306802 MsG0380014909.01.T01:intron 20.0%
!!! CTCTTAAATTTATTTTTCCA+TGG + Chr3:62309001-62309020 MsG0380014909.01.T01:three_prime_UTR 20.0%
!!! TATTTTATGATTGTCAGTTT+TGG + Chr3:62308452-62308471 MsG0380014909.01.T01:intron 20.0%
!!! TTACTTTTTCTATTGTTAAC+AGG + Chr3:62308813-62308832 MsG0380014909.01.T01:intron 20.0%
!!! TTATAATTTTGTACAAGATG+AGG + Chr3:62306472-62306491 MsG0380014909.01.T01:CDS 20.0%
!!! TTTTATTTAGGTTGCTAATT+TGG + Chr3:62306795-62306814 MsG0380014909.01.T01:intron 20.0%
! AAATAGTCAATGATGAGAAA+AGG + Chr3:62307325-62307344 MsG0380014909.01.T01:intron 25.0%
! AACAGAAATACAAGAGTTTA+GGG - Chr3:62307904-62307923 None:intergenic 25.0%
! AACAGAAATACATTTGTATC+AGG - Chr3:62308038-62308057 None:intergenic 25.0%
! AACATGAGATATTACCATTA+CGG - Chr3:62306986-62307005 None:intergenic 25.0%
! AATAGCTTAGTTTCTTGATT+TGG + Chr3:62307926-62307945 MsG0380014909.01.T01:intron 25.0%
! AATAGTCAATGATGAGAAAA+GGG + Chr3:62307326-62307345 MsG0380014909.01.T01:intron 25.0%
! AGAAAACTGAAAACAATTTG+AGG + Chr3:62305851-62305870 MsG0380014909.01.T01:intron 25.0%
! AGTTTACTAACCTAATTACA+GGG - Chr3:62305391-62305410 None:intergenic 25.0%
! ATAGCTTAGTTTCTTGATTT+GGG + Chr3:62307927-62307946 MsG0380014909.01.T01:intron 25.0%
! ATCTAAACGTGAAAACAAAT+AGG + Chr3:62306178-62306197 MsG0380014909.01.T01:intron 25.0%
! ATTAGCAACCTAAATAAAAG+AGG - Chr3:62306794-62306813 None:intergenic 25.0%
! ATTATGCTGTAAAGAAAACA+AGG + Chr3:62308910-62308929 MsG0380014909.01.T01:three_prime_UTR 25.0%
! ATTTCACTGCAATTTATATG+CGG - Chr3:62309730-62309749 None:intergenic 25.0%
! CAATATGATAACACATAACT+TGG - Chr3:62307959-62307978 None:intergenic 25.0%
! CACAAATTTAAATATAAGGC+AGG - Chr3:62307299-62307318 None:intergenic 25.0%
! CTAAATTGTTTATGCAAACA+AGG + Chr3:62306203-62306222 MsG0380014909.01.T01:intron 25.0%
! CTAATGTACAACAATAACTA+TGG - Chr3:62307877-62307896 None:intergenic 25.0%
! CTATTGATGAAAATGCTAAA+AGG + Chr3:62305324-62305343 MsG0380014909.01.T01:CDS 25.0%
! GAGATGTTGTACATAATATT+TGG + Chr3:62309117-62309136 MsG0380014909.01.T01:three_prime_UTR 25.0%
! GATGATATTACTGTAATTGT+TGG + Chr3:62308846-62308865 MsG0380014909.01.T01:CDS 25.0%
! TAACAGAAATACAAGAGTTT+AGG - Chr3:62307905-62307924 None:intergenic 25.0%
! TGGAAAATGACTTCTTAATA+GGG + Chr3:62308472-62308491 MsG0380014909.01.T01:intron 25.0%
! TTCTTTGTGAGTAACTATAA+TGG + Chr3:62305652-62305671 MsG0380014909.01.T01:CDS 25.0%
! TTGGAAAATGACTTCTTAAT+AGG + Chr3:62308471-62308490 MsG0380014909.01.T01:intron 25.0%
! TTTAGGTCTATGTTAGAATT+GGG + Chr3:62305449-62305468 MsG0380014909.01.T01:intron 25.0%
! TTTATGATTGATATTTAGGC+GGG + Chr3:62309377-62309396 MsG0380014909.01.T01:three_prime_UTR 25.0%
! TTTCACGGAAAAAATACATT+GGG - Chr3:62306109-62306128 None:intergenic 25.0%
!! ACAAACTTATTTCTTTACCT+TGG - Chr3:62308381-62308400 None:intergenic 25.0%
!! AGAAGCATATTGTATAGTAA+AGG - Chr3:62309241-62309260 None:intergenic 25.0%
!! ATTAGTTGTGGTGATTTTAA+TGG - Chr3:62307547-62307566 None:intergenic 25.0%
!! CGATTTTGCATAGAATTTTT+GGG + Chr3:62307789-62307808 MsG0380014909.01.T01:intron 25.0%
!! TCGATTTTGCATAGAATTTT+TGG + Chr3:62307788-62307807 MsG0380014909.01.T01:intron 25.0%
!! TTTGTTACTTGTTAAAGTTG+TGG + Chr3:62305594-62305613 MsG0380014909.01.T01:intron 25.0%
!! TTTTCACGGAAAAAATACAT+TGG - Chr3:62306110-62306129 None:intergenic 25.0%
!!! GTATTTTTTCCGTGAAAATA+TGG + Chr3:62306112-62306131 MsG0380014909.01.T01:intron 25.0%
!!! TATTTGTTTTCACGTTTAGA+TGG - Chr3:62306179-62306198 None:intergenic 25.0%
!!! TTTTAGGTCTATGTTAGAAT+TGG + Chr3:62305448-62305467 MsG0380014909.01.T01:intron 25.0%
AAAAGATTACTTGACCTGAA+AGG - Chr3:62307093-62307112 None:intergenic 30.0%
AAACAGATCAACAAAGAAGA+AGG - Chr3:62308223-62308242 None:intergenic 30.0%
AAACCCAGATATAAATGATG+AGG + Chr3:62309591-62309610 MsG0380014909.01.T01:three_prime_UTR 30.0%
AAATGAGATTATATCCCCTT+TGG - Chr3:62308011-62308030 None:intergenic 30.0%
AAATTGTTGAGGCTATATTG+TGG - Chr3:62306870-62306889 None:intergenic 30.0%
AAGTGACACTTATTATGAGA+CGG - Chr3:62307466-62307485 None:intergenic 30.0%
AAGTTAAACATCATCTCAGA+AGG - Chr3:62309648-62309667 None:intergenic 30.0%
AATCTAAAGATTGCCAATGT+TGG + Chr3:62306939-62306958 MsG0380014909.01.T01:CDS 30.0%
AATGAGATTATATCCCCTTT+GGG - Chr3:62308010-62308029 None:intergenic 30.0%
ACAAAGTCAAGTGTTTATTG+TGG - Chr3:62306262-62306281 None:intergenic 30.0%
ACAGAAATACAAGAGTTTAG+GGG - Chr3:62307903-62307922 None:intergenic 30.0%
AGAAAAACAGGTAAGTAATG+TGG + Chr3:62308082-62308101 MsG0380014909.01.T01:intron 30.0%
AGTCCTCATCATTTATATCT+GGG - Chr3:62309597-62309616 None:intergenic 30.0%
ATGGTTATATGCATGTTGTT+TGG + Chr3:62306637-62306656 MsG0380014909.01.T01:intron 30.0%
CAAAGTCAAGTGTTTATTGT+GGG - Chr3:62306261-62306280 None:intergenic 30.0%
CGATGAGGAAAAAACATATA+GGG - Chr3:62307028-62307047 None:intergenic 30.0%
GAAGATATGTTATGAATGTG+TGG - Chr3:62305305-62305324 None:intergenic 30.0%
GAGTTTACTAACCTAATTAC+AGG - Chr3:62305392-62305411 None:intergenic 30.0%
TAAATGTTACCATTGCATCA+AGG - Chr3:62307186-62307205 None:intergenic 30.0%
TAGTCCTCATCATTTATATC+TGG - Chr3:62309598-62309617 None:intergenic 30.0%
TATTACTGTAATTGTTGGTC+AGG + Chr3:62308851-62308870 MsG0380014909.01.T01:CDS 30.0%
TCGATGAGGAAAAAACATAT+AGG - Chr3:62307029-62307048 None:intergenic 30.0%
TGTTGAGAACTTGAATTTCT+CGG + Chr3:62307061-62307080 MsG0380014909.01.T01:intron 30.0%
TTATGATTGATATTTAGGCG+GGG + Chr3:62309378-62309397 MsG0380014909.01.T01:three_prime_UTR 30.0%
TTCAATATTGAGAGCTGTAA+TGG + Chr3:62305253-62305272 MsG0380014909.01.T01:CDS 30.0%
TTGATGAAAATGCTAAAAGG+AGG + Chr3:62305327-62305346 MsG0380014909.01.T01:CDS 30.0%
TTGCAAGTGCTTAATTAAGT+GGG + Chr3:62306048-62306067 MsG0380014909.01.T01:intron 30.0%
TTTACATTAGACGTACGTTT+GGG + Chr3:62306152-62306171 MsG0380014909.01.T01:intron 30.0%
TTTACTTTATAGGTCATCAG+AGG + Chr3:62305479-62305498 MsG0380014909.01.T01:intron 30.0%
TTTCACTGCAATTTATATGC+GGG - Chr3:62309729-62309748 None:intergenic 30.0%
TTTGTGAGTAACTATAATGG+TGG + Chr3:62305655-62305674 MsG0380014909.01.T01:CDS 30.0%
! AGAAACATCTTTGTTTGCAA+CGG - Chr3:62308186-62308205 None:intergenic 30.0%
! CTTAAGGAAATGATTAGTTG+TGG - Chr3:62307559-62307578 None:intergenic 30.0%
! CTTTTTCTATTGTTAACAGG+TGG + Chr3:62308816-62308835 MsG0380014909.01.T01:intron 30.0%
! GAATGTGTTTCAACTTCTTT+TGG - Chr3:62308588-62308607 None:intergenic 30.0%
! GCATTGTCAACAATTTTACA+GGG + Chr3:62308687-62308706 MsG0380014909.01.T01:intron 30.0%
! TAATTTTGTACAAGATGAGG+AGG + Chr3:62306475-62306494 MsG0380014909.01.T01:CDS 30.0%
! TACATAATATTTGGAACCAG+TGG + Chr3:62309126-62309145 MsG0380014909.01.T01:three_prime_UTR 30.0%
! TCTATGTTAGAATTGGGTTT+TGG + Chr3:62305455-62305474 MsG0380014909.01.T01:intron 30.0%
! TGCATTGTCAACAATTTTAC+AGG + Chr3:62308686-62308705 MsG0380014909.01.T01:intron 30.0%
! TTAACCCAAAGCCAATATTT+TGG - Chr3:62307827-62307846 None:intergenic 30.0%
! TTGTAGCTTCCATATTTTCA+CGG - Chr3:62306124-62306143 None:intergenic 30.0%
!! AAAATATTGGCTTTGGGTTA+AGG + Chr3:62307826-62307845 MsG0380014909.01.T01:intron 30.0%
!! AAATATTGGCTTTGGGTTAA+GGG + Chr3:62307827-62307846 MsG0380014909.01.T01:intron 30.0%
!! ATTAGTTTGCGTAAGATAGA+TGG + Chr3:62308614-62308633 MsG0380014909.01.T01:intron 30.0%
!! CATGTTGTTTCGTTGAATAT+TGG + Chr3:62306675-62306694 MsG0380014909.01.T01:intron 30.0%
!! TTTTGATTCTCCGTATTCAT+TGG + Chr3:62308346-62308365 MsG0380014909.01.T01:CDS 30.0%
!!! CGACTCTTTTAAAACTTAGA+AGG - Chr3:62308504-62308523 None:intergenic 30.0%
!!! GGGTTTTGGTTTTACTTTAT+AGG + Chr3:62305469-62305488 MsG0380014909.01.T01:intron 30.0%
AATTCACGTGGGAATAATGA+AGG - Chr3:62306440-62306459 None:intergenic 35.0%
ACAAATAGAGGAGTAGGAAA+AGG - Chr3:62307245-62307264 None:intergenic 35.0%
ACACACACAATTACACAACA+TGG + Chr3:62309283-62309302 MsG0380014909.01.T01:three_prime_UTR 35.0%
ACTAACCTTGACAGAAAAAC+AGG + Chr3:62308070-62308089 MsG0380014909.01.T01:intron 35.0%
ACTATTACCTTCTTTGGATG+TGG - Chr3:62305534-62305553 None:intergenic 35.0%
AGTGAAGTGAAGACAAATAG+AGG - Chr3:62307257-62307276 None:intergenic 35.0%
ATGAAGCTCTACATACTTCA+CGG - Chr3:62309043-62309062 None:intergenic 35.0%
ATGATATGAAGAATCCGTGA+TGG + Chr3:62309402-62309421 MsG0380014909.01.T01:three_prime_UTR 35.0%
ATGATCCGCAGATTCTTATA+AGG + Chr3:62306717-62306736 MsG0380014909.01.T01:CDS 35.0%
ATTATTCCCACGTGAATTGA+TGG + Chr3:62306442-62306461 MsG0380014909.01.T01:CDS 35.0%
ATTGCATGCTAATCCTTTCT+TGG - Chr3:62309482-62309501 None:intergenic 35.0%
ATTGCTATGCTGGAAAAGAA+TGG + Chr3:62306915-62306934 MsG0380014909.01.T01:CDS 35.0%
ATTGTTAAGATCACCAGAGA+AGG + Chr3:62308938-62308957 MsG0380014909.01.T01:three_prime_UTR 35.0%
CAATCTGAGCAAGAAAGTTT+AGG - Chr3:62307375-62307394 None:intergenic 35.0%
CAGAAATACAAGAGTTTAGG+GGG - Chr3:62307902-62307921 None:intergenic 35.0%
CAGAACTTAACCCTGTAATT+AGG + Chr3:62305378-62305397 MsG0380014909.01.T01:CDS 35.0%
CAGTCAAAGTAATGTTCTTG+TGG - Chr3:62307124-62307143 None:intergenic 35.0%
CTTCTTTGTTGATCTGTTTG+AGG + Chr3:62308224-62308243 MsG0380014909.01.T01:intron 35.0%
CTTTACATTAGACGTACGTT+TGG + Chr3:62306151-62306170 MsG0380014909.01.T01:intron 35.0%
GAAGTTAAAGTGGTAAGGAA+TGG + Chr3:62305226-62305245 MsG0380014909.01.T01:exon 35.0%
GAGCTGTCATTCAAAAAGAA+TGG + Chr3:62306618-62306637 MsG0380014909.01.T01:intron 35.0%
GAGTTGAAGTTAAAGTGGTA+AGG + Chr3:62305221-62305240 MsG0380014909.01.T01:five_prime_UTR 35.0%
GCTTTCCTTATAAGAATCTG+CGG - Chr3:62306725-62306744 None:intergenic 35.0%
GTTGCAAGTGCTTAATTAAG+TGG + Chr3:62306047-62306066 MsG0380014909.01.T01:intron 35.0%
TAAAGTTGTGGTGTTTGTGA+AGG + Chr3:62305606-62305625 MsG0380014909.01.T01:intron 35.0%
TAATCCACAATCACCAACAT+TGG - Chr3:62306955-62306974 None:intergenic 35.0%
TAATTAAGCACTTGCAACAG+AGG - Chr3:62306045-62306064 None:intergenic 35.0%
TATGATTGATATTTAGGCGG+GGG + Chr3:62309379-62309398 MsG0380014909.01.T01:three_prime_UTR 35.0%
TATGGATGAATAGTACCTGT+CGG - Chr3:62309443-62309462 None:intergenic 35.0%
TCACAGACAAGAAATTGTTG+AGG - Chr3:62306881-62306900 None:intergenic 35.0%
TCACTTTCATTCTTTCCTAG+TGG + Chr3:62305721-62305740 MsG0380014909.01.T01:intron 35.0%
TCAGTATCTGCGTTTAGTTA+CGG - Chr3:62306503-62306522 None:intergenic 35.0%
TGCTTAATTAAGTGGGTGTT+TGG + Chr3:62306055-62306074 MsG0380014909.01.T01:intron 35.0%
TTACATTAGACGTACGTTTG+GGG + Chr3:62306153-62306172 MsG0380014909.01.T01:intron 35.0%
TTACATTGTTGTACCTTGCT+GGG + Chr3:62309753-62309772 MsG0380014909.01.T01:three_prime_UTR 35.0%
TTGCTATGCTGGAAAAGAAT+GGG + Chr3:62306916-62306935 MsG0380014909.01.T01:CDS 35.0%
TTTACATTGTTGTACCTTGC+TGG + Chr3:62309752-62309771 MsG0380014909.01.T01:three_prime_UTR 35.0%
TTTCAGATTGAAGTTGTGTC+TGG - Chr3:62307766-62307785 None:intergenic 35.0%
TTTCCATAAGTTCTTCCACT+AGG - Chr3:62305739-62305758 None:intergenic 35.0%
TTTCCTAGTGGAAGAACTTA+TGG + Chr3:62305733-62305752 MsG0380014909.01.T01:intron 35.0%
! CAGAGGTTTCATTTTCTGTT+GGG + Chr3:62305496-62305515 MsG0380014909.01.T01:CDS 35.0%
! GTTCATTTTGTTGCTAGCAA+AGG + Chr3:62308283-62308302 MsG0380014909.01.T01:intron 35.0%
! GTTGTTTCGTTGAATATTGG+TGG + Chr3:62306678-62306697 MsG0380014909.01.T01:intron 35.0%
! TCAGAGGTTTCATTTTCTGT+TGG + Chr3:62305495-62305514 MsG0380014909.01.T01:CDS 35.0%
! TGAAAACAATTTGAGGTCTC+AGG + Chr3:62305858-62305877 MsG0380014909.01.T01:intron 35.0%
! TGCAAACAAAGATGTTTCTG+AGG + Chr3:62308187-62308206 MsG0380014909.01.T01:CDS 35.0%
!! AATATTGGCTTTGGGTTAAG+GGG + Chr3:62307828-62307847 MsG0380014909.01.T01:intron 35.0%
!! ACTTACCTGTTTTTCTGTCA+AGG - Chr3:62308078-62308097 None:intergenic 35.0%
!! CATTCAAAGTGTTTTCGATG+AGG - Chr3:62307043-62307062 None:intergenic 35.0%
!! TAAAGGCATTCAGCTTACAT+TGG - Chr3:62309224-62309243 None:intergenic 35.0%
!! TACATGTTTTTGCTTACCAC+TGG - Chr3:62309145-62309164 None:intergenic 35.0%
!!! TACCTGTGTCATTTTCATGT+CGG + Chr3:62307731-62307750 MsG0380014909.01.T01:intron 35.0%
!!! TGAATATTGGTGGATTTTGC+AGG + Chr3:62306688-62306707 MsG0380014909.01.T01:intron 35.0%
AAACAAAAGTTTCCCCAGCA+AGG - Chr3:62309769-62309788 None:intergenic 40.0%
AATGCTACACTTGTCTGAGA+CGG + Chr3:62307595-62307614 MsG0380014909.01.T01:intron 40.0%
ACAATTGTCATGGGATCTGA+TGG + Chr3:62308122-62308141 MsG0380014909.01.T01:CDS 40.0%
ACACAACACAACTTCCCAAA+GGG + Chr3:62307993-62308012 MsG0380014909.01.T01:intron 40.0%
ACACTTATTATGAGACGGAG+GGG - Chr3:62307461-62307480 None:intergenic 40.0%
AGAGGGAGTTGAAGTTAAAG+TGG + Chr3:62305216-62305235 MsG0380014909.01.T01:five_prime_UTR 40.0%
ATGACCAAAGTTTAGTGCCA+CGG - Chr3:62308980-62308999 None:intergenic 40.0%
CAACGGTTAGAGCAATTTCA+TGG - Chr3:62308169-62308188 None:intergenic 40.0%
CAATTGTCATGGGATCTGAT+GGG + Chr3:62308123-62308142 MsG0380014909.01.T01:CDS 40.0%
CATTAGCCATCAATTCACGT+GGG - Chr3:62306451-62306470 None:intergenic 40.0%
CCAAACATACCTTGATGCAA+TGG + Chr3:62307174-62307193 MsG0380014909.01.T01:CDS 40.0%
CCATTGCATCAAGGTATGTT+TGG - Chr3:62307177-62307196 None:intergenic 40.0%
CCTTATTCCACATCCAAAGA+AGG + Chr3:62305524-62305543 MsG0380014909.01.T01:CDS 40.0%
CCTTCTTTGGATGTGGAATA+AGG - Chr3:62305527-62305546 None:intergenic 40.0%
CTCAGACAAGTGTAGCATTT+GGG - Chr3:62307594-62307613 None:intergenic 40.0%
CTCTGGTGATCTTAACAATC+AGG - Chr3:62308937-62308956 None:intergenic 40.0%
CTGTTGCAATTTGTATGCAG+AGG + Chr3:62309670-62309689 MsG0380014909.01.T01:three_prime_UTR 40.0%
GAAGGAGACACAATTGTCAT+GGG + Chr3:62308113-62308132 MsG0380014909.01.T01:CDS 40.0%
GACACTTATTATGAGACGGA+GGG - Chr3:62307462-62307481 None:intergenic 40.0%
GGATTACGAGTTATCCGTAA+TGG + Chr3:62306969-62306988 MsG0380014909.01.T01:CDS 40.0%
GGTAAGTAATGTGGAGTTGA+TGG + Chr3:62308091-62308110 MsG0380014909.01.T01:intron 40.0%
GTAATGTTCTTGTGGAGAAG+TGG - Chr3:62307116-62307135 None:intergenic 40.0%
GTGAAGACAAATAGAGGAGT+AGG - Chr3:62307251-62307270 None:intergenic 40.0%
GTGTTTGTGAAGGTTGAGAA+AGG + Chr3:62305616-62305635 MsG0380014909.01.T01:intron 40.0%
TACACAACACAACTTCCCAA+AGG + Chr3:62307992-62308011 MsG0380014909.01.T01:intron 40.0%
TACATTGTTGTACCTTGCTG+GGG + Chr3:62309754-62309773 MsG0380014909.01.T01:three_prime_UTR 40.0%
TATACCGTGGCACTAAACTT+TGG + Chr3:62308973-62308992 MsG0380014909.01.T01:three_prime_UTR 40.0%
TCTCAGACAAGTGTAGCATT+TGG - Chr3:62307595-62307614 None:intergenic 40.0%
TCTGAGCAAGAAAGTTTAGG+TGG - Chr3:62307372-62307391 None:intergenic 40.0%
TGACACTTATTATGAGACGG+AGG - Chr3:62307463-62307482 None:intergenic 40.0%
TGATTCTCCGTATTCATTGG+AGG + Chr3:62308349-62308368 MsG0380014909.01.T01:CDS 40.0%
TGTCAAGTAACCTTCCATCA+CGG - Chr3:62309419-62309438 None:intergenic 40.0%
TTAGCATGCAATGAATCCTC+CGG + Chr3:62309490-62309509 MsG0380014909.01.T01:three_prime_UTR 40.0%
TTAGTGCCACGGTATACTTA+AGG - Chr3:62308969-62308988 None:intergenic 40.0%
TTATGTGTCAACGTCGTCTT+TGG - Chr3:62307668-62307687 None:intergenic 40.0%
TTGTGAAGGTTGAGAAAGGT+GGG + Chr3:62305620-62305639 MsG0380014909.01.T01:intron 40.0%
TTGTGTCTTGCTTCACAGTT+GGG + Chr3:62306397-62306416 MsG0380014909.01.T01:intron 40.0%
TTGTTTGCCAATCTCGAACA+AGG + Chr3:62309522-62309541 MsG0380014909.01.T01:three_prime_UTR 40.0%
TTTGTGAAGGTTGAGAAAGG+TGG + Chr3:62305619-62305638 MsG0380014909.01.T01:intron 40.0%
TTTGTGTCTTGCTTCACAGT+TGG + Chr3:62306396-62306415 MsG0380014909.01.T01:intron 40.0%
! ACAATTTGAGGTCTCAGGAT+TGG + Chr3:62305863-62305882 MsG0380014909.01.T01:intron 40.0%
! CATGGTGGAAGAAAGTTCTT+GGG + Chr3:62308721-62308740 MsG0380014909.01.T01:CDS 40.0%
! TATGAAGAATCCGTGATGGA+AGG + Chr3:62309406-62309425 MsG0380014909.01.T01:three_prime_UTR 40.0%
!! AACAAAGATGTTTCTGAGGC+TGG + Chr3:62308191-62308210 MsG0380014909.01.T01:CDS 40.0%
!! AGCAAAGGCATTAGCTAACT+TGG + Chr3:62308298-62308317 MsG0380014909.01.T01:intron 40.0%
!! AGGCAAGTCATCGATTCAAA+AGG + Chr3:62309690-62309709 MsG0380014909.01.T01:three_prime_UTR 40.0%
!! AGTAATGTGGAGTTGATGGA+AGG + Chr3:62308095-62308114 MsG0380014909.01.T01:CDS 40.0%
!! ATTGCCAATGTTGGTGATTG+TGG + Chr3:62306948-62306967 MsG0380014909.01.T01:CDS 40.0%
!! CCAGCCAAAATATTGGCTTT+GGG + Chr3:62307820-62307839 MsG0380014909.01.T01:intron 40.0%
ACTATGTCACGTGCTTCAGA+TGG + Chr3:62309614-62309633 MsG0380014909.01.T01:three_prime_UTR 45.0%
ACTTAAGGCAACTCCTTCTC+TGG - Chr3:62308954-62308973 None:intergenic 45.0%
CACAACACAACTTCCCAAAG+GGG + Chr3:62307994-62308013 MsG0380014909.01.T01:intron 45.0%
CACCGACATGAAAATGACAC+AGG - Chr3:62307736-62307755 None:intergenic 45.0%
CACTTATTATGAGACGGAGG+GGG - Chr3:62307460-62307479 None:intergenic 45.0%
CATGCTGCTACATTCTCTAC+AGG + Chr3:62306746-62306765 MsG0380014909.01.T01:CDS 45.0%
CCAAGAACTTTCTTCCACCA+TGG - Chr3:62308723-62308742 None:intergenic 45.0%
CGACGTTGACACATAAACAC+CGG + Chr3:62307672-62307691 MsG0380014909.01.T01:intron 45.0%
CTTGGCAAACAGTCATGCAA+TGG + Chr3:62308316-62308335 MsG0380014909.01.T01:CDS 45.0%
GAGGAATTGCGATCAACTGT+AGG + Chr3:62308243-62308262 MsG0380014909.01.T01:intron 45.0%
GAGTTGCCTTAAGTATACCG+TGG + Chr3:62308960-62308979 MsG0380014909.01.T01:three_prime_UTR 45.0%
GCAAAGCAAGAGAACTTCCA+TGG - Chr3:62309021-62309040 None:intergenic 45.0%
GCATTAGCCATCAATTCACG+TGG - Chr3:62306452-62306471 None:intergenic 45.0%
GGAAGGAGACACAATTGTCA+TGG + Chr3:62308112-62308131 MsG0380014909.01.T01:CDS 45.0%
GTTCTTGGGATGAAGTTGAC+AGG + Chr3:62308735-62308754 MsG0380014909.01.T01:CDS 45.0%
TCACGTGCCAGCCAAAATAT+TGG + Chr3:62307813-62307832 MsG0380014909.01.T01:intron 45.0%
TCCGTATTCATTGGAGGCAA+GGG + Chr3:62308355-62308374 MsG0380014909.01.T01:CDS 45.0%
TGGCAAACAATTGCAACCAC+CGG - Chr3:62309512-62309531 None:intergenic 45.0%
TGGGATGAAGTTGACAGGTA+TGG + Chr3:62308740-62308759 MsG0380014909.01.T01:intron 45.0%
TGGGTTGTGCACAGTTCTTA+AGG - Chr3:62307575-62307594 None:intergenic 45.0%
TGTGAAGGTTGAGAAAGGTG+GGG + Chr3:62305621-62305640 MsG0380014909.01.T01:intron 45.0%
! ATCCATAGTTTTCCTGCCTG+TGG + Chr3:62309456-62309475 MsG0380014909.01.T01:three_prime_UTR 45.0%
! ATCTCGAACAAGGCATTTGG+TGG + Chr3:62309532-62309551 MsG0380014909.01.T01:three_prime_UTR 45.0%
! CCAAATGCCTTGTTCGAGAT+TGG - Chr3:62309532-62309551 None:intergenic 45.0%
! CCAATCTCGAACAAGGCATT+TGG + Chr3:62309529-62309548 MsG0380014909.01.T01:three_prime_UTR 45.0%
! CCATGGTGGAAGAAAGTTCT+TGG + Chr3:62308720-62308739 MsG0380014909.01.T01:CDS 45.0%
! GTGAAGCATCATTGCTATGC+TGG + Chr3:62306905-62306924 MsG0380014909.01.T01:intron 45.0%
! GTGTAGCATCGGATTATGCT+GGG - Chr3:62307430-62307449 None:intergenic 45.0%
! TAAGTGGGTGTTTGGAACTG+CGG + Chr3:62306063-62306082 MsG0380014909.01.T01:intron 45.0%
! TCTCAGAGCTCAGTTGGTAT+GGG - Chr3:62307147-62307166 None:intergenic 45.0%
! TGTGTAGCATCGGATTATGC+TGG - Chr3:62307431-62307450 None:intergenic 45.0%
!! AGATGTTTCTGAGGCTGGTA+TGG + Chr3:62308196-62308215 MsG0380014909.01.T01:intron 45.0%
!! ATACCAACTGAGCTCTGAGA+GGG + Chr3:62307147-62307166 MsG0380014909.01.T01:CDS 45.0%
!! GCCAGCCAAAATATTGGCTT+TGG + Chr3:62307819-62307838 MsG0380014909.01.T01:intron 45.0%
!! GGGGTATTGTTGTGTAGCAT+CGG - Chr3:62307441-62307460 None:intergenic 45.0%
!! TTTCTCGGTGTTCTCCTTTC+AGG + Chr3:62307076-62307095 MsG0380014909.01.T01:intron 45.0%
!!! CCCAAAGCCAATATTTTGGC+TGG - Chr3:62307823-62307842 None:intergenic 45.0%
!!! CTGTGTCATTTTCATGTCGG+TGG + Chr3:62307734-62307753 MsG0380014909.01.T01:intron 45.0%
!!! TACAGGGTTTTGAAGCTCCA+TGG + Chr3:62308703-62308722 MsG0380014909.01.T01:intron 45.0%
!!! TGTCATTTTCATGTCGGTGG+CGG + Chr3:62307737-62307756 MsG0380014909.01.T01:intron 45.0%
AAGGTTACTTGACAGCCGAC+AGG + Chr3:62309425-62309444 MsG0380014909.01.T01:three_prime_UTR 50.0%
CAAACAATTGCAACCACCGG+AGG - Chr3:62309509-62309528 None:intergenic 50.0%
CTCCGTATTCATTGGAGGCA+AGG + Chr3:62308354-62308373 MsG0380014909.01.T01:CDS 50.0%
GCCCTTGCCTCCAATGAATA+CGG - Chr3:62308359-62308378 None:intergenic 50.0%
GCTAATCCTTTCTTGGCCAC+AGG - Chr3:62309475-62309494 None:intergenic 50.0%
GGAGTTATTGCTGTCGCTGA+TGG + Chr3:62305676-62305695 MsG0380014909.01.T01:CDS 50.0%
TGTCCAAAGACCGACTACTC+CGG - Chr3:62305892-62305911 None:intergenic 50.0%
! CTACACTTGTCTGAGACGGA+AGG + Chr3:62307599-62307618 MsG0380014909.01.T01:intron 50.0%
! CTCTCAGAGCTCAGTTGGTA+TGG - Chr3:62307148-62307167 None:intergenic 50.0%
! GAACAAGGCATTTGGTGGCA+CGG + Chr3:62309537-62309556 MsG0380014909.01.T01:three_prime_UTR 50.0%
!! CATACCAACTGAGCTCTGAG+AGG + Chr3:62307146-62307165 MsG0380014909.01.T01:CDS 50.0%
!!! AGGGTTTTGAAGCTCCATGG+TGG + Chr3:62308706-62308725 MsG0380014909.01.T01:intron 50.0%
ATCCTTTCTTGGCCACAGGC+AGG - Chr3:62309471-62309490 None:intergenic 55.0%
CAACCCTCTCAGAGCTCAGT+TGG - Chr3:62307153-62307172 None:intergenic 55.0%
GCATGCAATGAATCCTCCGG+TGG + Chr3:62309493-62309512 MsG0380014909.01.T01:three_prime_UTR 55.0%
GCTTCACAGTTGGGCTGAAG+AGG + Chr3:62306406-62306425 MsG0380014909.01.T01:intron 55.0%
GGAGTAGTCGGTCTTTGGAC+AGG + Chr3:62305891-62305910 MsG0380014909.01.T01:intron 55.0%
GGCCACAGGCAGGAAAACTA+TGG - Chr3:62309461-62309480 None:intergenic 55.0%
TCTCCGGAGTAGTCGGTCTT+TGG + Chr3:62305886-62305905 MsG0380014909.01.T01:intron 55.0%
TTCATTGGAGGCAAGGGCCA+AGG + Chr3:62308361-62308380 MsG0380014909.01.T01:CDS 55.0%
TTCCTGCCTGTGGCCAAGAA+AGG + Chr3:62309466-62309485 MsG0380014909.01.T01:three_prime_UTR 55.0%
! CTGTCGCTGATGGTGTCTCT+GGG + Chr3:62305686-62305705 MsG0380014909.01.T01:CDS 55.0%
! GGGTGTTTGGAACTGCGGTA+GGG + Chr3:62306068-62306087 MsG0380014909.01.T01:intron 55.0%
! TGGGTGTTTGGAACTGCGGT+AGG + Chr3:62306067-62306086 MsG0380014909.01.T01:intron 55.0%
!! CAACTGAGCTCTGAGAGGGT+TGG + Chr3:62307151-62307170 MsG0380014909.01.T01:CDS 55.0%
!! GAGGTCTCAGGATTGGTCTC+CGG + Chr3:62305870-62305889 MsG0380014909.01.T01:intron 55.0%
!! GGATTGGTCTCCGGAGTAGT+CGG + Chr3:62305879-62305898 MsG0380014909.01.T01:intron 55.0%
! GCTGTCGCTGATGGTGTCTC+TGG + Chr3:62305685-62305704 MsG0380014909.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 62305207 62309828 62305207 ID=MsG0380014909.01;Name=MsG0380014909.01
Chr3 mRNA 62305207 62309828 62305207 ID=MsG0380014909.01.T01;Parent=MsG0380014909.01;Name=MsG0380014909.01.T01;_AED=0.46;_eAED=0.46;_QI=38|1|1|1|1|1|11|941|308
Chr3 exon 62305207 62305399 62305207 ID=MsG0380014909.01.T01:exon:29458;Parent=MsG0380014909.01.T01
Chr3 exon 62305491 62305545 62305491 ID=MsG0380014909.01.T01:exon:29459;Parent=MsG0380014909.01.T01
Chr3 exon 62305628 62305707 62305628 ID=MsG0380014909.01.T01:exon:29460;Parent=MsG0380014909.01.T01
Chr3 exon 62306415 62306496 62306415 ID=MsG0380014909.01.T01:exon:29461;Parent=MsG0380014909.01.T01
Chr3 exon 62306710 62306780 62306710 ID=MsG0380014909.01.T01:exon:29462;Parent=MsG0380014909.01.T01
Chr3 exon 62306911 62306990 62306911 ID=MsG0380014909.01.T01:exon:29463;Parent=MsG0380014909.01.T01
Chr3 exon 62307098 62307195 62307098 ID=MsG0380014909.01.T01:exon:29464;Parent=MsG0380014909.01.T01
Chr3 exon 62308092 62308212 62308092 ID=MsG0380014909.01.T01:exon:29465;Parent=MsG0380014909.01.T01
Chr3 exon 62308300 62308382 62308300 ID=MsG0380014909.01.T01:exon:29466;Parent=MsG0380014909.01.T01
Chr3 exon 62308708 62308756 62308708 ID=MsG0380014909.01.T01:exon:29467;Parent=MsG0380014909.01.T01
Chr3 exon 62308835 62309828 62308835 ID=MsG0380014909.01.T01:exon:29468;Parent=MsG0380014909.01.T01
Chr3 five_prime_UTR 62305207 62305244 62305207 ID=MsG0380014909.01.T01:five_prime_utr;Parent=MsG0380014909.01.T01
Chr3 CDS 62305245 62305399 62305245 ID=MsG0380014909.01.T01:cds;Parent=MsG0380014909.01.T01
Chr3 CDS 62305491 62305545 62305491 ID=MsG0380014909.01.T01:cds;Parent=MsG0380014909.01.T01
Chr3 CDS 62305628 62305707 62305628 ID=MsG0380014909.01.T01:cds;Parent=MsG0380014909.01.T01
Chr3 CDS 62306415 62306496 62306415 ID=MsG0380014909.01.T01:cds;Parent=MsG0380014909.01.T01
Chr3 CDS 62306710 62306780 62306710 ID=MsG0380014909.01.T01:cds;Parent=MsG0380014909.01.T01
Chr3 CDS 62306911 62306990 62306911 ID=MsG0380014909.01.T01:cds;Parent=MsG0380014909.01.T01
Chr3 CDS 62307098 62307195 62307098 ID=MsG0380014909.01.T01:cds;Parent=MsG0380014909.01.T01
Chr3 CDS 62308092 62308212 62308092 ID=MsG0380014909.01.T01:cds;Parent=MsG0380014909.01.T01
Chr3 CDS 62308300 62308382 62308300 ID=MsG0380014909.01.T01:cds;Parent=MsG0380014909.01.T01
Chr3 CDS 62308708 62308756 62308708 ID=MsG0380014909.01.T01:cds;Parent=MsG0380014909.01.T01
Chr3 CDS 62308835 62308887 62308835 ID=MsG0380014909.01.T01:cds;Parent=MsG0380014909.01.T01
Chr3 three_prime_UTR 62308888 62309828 62308888 ID=MsG0380014909.01.T01:three_prime_utr;Parent=MsG0380014909.01.T01
Gene Sequence

>MsG0380014909.01.T01

ATGGCTATTTCAATATTGAGAGCTGTAATGGTGTCTAATTCTCATTGTCAATCTCAACCACACATTCATAACATATCTTCTATTGATGAAAATGCTAAAAGGAGGAAAAGAGTAGTTTTCTCTTCTCATTCTTCAGAACTTAACCCTGTAATTAGGTCATCAGAGGTTTCATTTTCTGTTGGGACTTGCCTTATTCCACATCCAAAGAAGGTTGAGAAAGGTGGGGAAGATGCTTTCTTTGTGAGTAACTATAATGGTGGAGTTATTGCTGTCGCTGATGGTGTCTCTGGTTGGGCTGAAGAGGATGTAGATCCTTCATTATTCCCACGTGAATTGATGGCTAATGCTTATAATTTTGTACAAGATGAGGAGGTGAACAATGATCCGCAGATTCTTATAAGGAAAGCACATGCTGCTACATTCTCTACAGGCTCAGCAACTGTCATCATTGCTATGCTGGAAAAGAATGGGAATCTAAAGATTGCCAATGTTGGTGATTGTGGATTACGAGTTATCCGTAATGGTCAAGTAATCTTTTCCACTTCTCCACAAGAACATTACTTTGACTGCCCATACCAACTGAGCTCTGAGAGGGTTGGCCAAACATACCTTGATGCAATGGTAAGTAATGTGGAGTTGATGGAAGGAGACACAATTGTCATGGGATCTGATGGGCTTTTTGATAATGTTTTTGACCATGAAATTGCTCTAACCGTTGCAAACAAAGATGTTTCTGAGGCTGCAAAGGCATTAGCTAACTTGGCAAACAGTCATGCAATGGATTCAAATTTTGATTCTCCGTATTCATTGGAGGCAAGGGCCAAGGGTTTTGAAGCTCCATGGTGGAAGAAAGTTCTTGGGATGAAGTTGACAGGTGGAAAGCTTGATGATATTACTGTAATTGTTGGTCAGGTTATAAATTCATGA

Protein sequence

>MsG0380014909.01.T01

MAISILRAVMVSNSHCQSQPHIHNISSIDENAKRRKRVVFSSHSSELNPVIRSSEVSFSVGTCLIPHPKKVEKGGEDAFFVSNYNGGVIAVADGVSGWAEEDVDPSLFPRELMANAYNFVQDEEVNNDPQILIRKAHAATFSTGSATVIIAMLEKNGNLKIANVGDCGLRVIRNGQVIFSTSPQEHYFDCPYQLSSERVGQTYLDAMVSNVELMEGDTIVMGSDGLFDNVFDHEIALTVANKDVSEAAKALANLANSHAMDSNFDSPYSLEARAKGFEAPWWKKVLGMKLTGGKLDDITVIVGQVINS*