Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025526.01.T01 | XP_003612904.3 | 89.793 | 725 | 60 | 5 | 1 | 721 | 1 | 715 | 0 | 1228 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025526.01.T01 | Q9FPS7 | 52.078 | 361 | 155 | 4 | 135 | 486 | 155 | 506 | 2.26E-114 | 363 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025526.01.T01 | A0A396HND4 | 89.793 | 725 | 60 | 5 | 1 | 721 | 1 | 715 | 0.0 | 1228 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180001293.01 | MsG0580025526.01 | 0.808335 | 3.257597e-50 | 1.857682e-47 |
MsG0180002218.01 | MsG0580025526.01 | 0.806183 | 9.308603e-50 | 5.019922e-47 |
MsG0180002397.01 | MsG0580025526.01 | 0.847781 | 9.308591e-60 | 1.672566e-56 |
MsG0180003658.01 | MsG0580025526.01 | 0.808233 | 3.425140e-50 | 1.947922e-47 |
MsG0180003857.01 | MsG0580025526.01 | 0.831126 | 1.991973e-55 | 2.141706e-52 |
MsG0180004120.01 | MsG0580025526.01 | 0.807840 | 4.152561e-50 | 2.337199e-47 |
MsG0180004126.01 | MsG0580025526.01 | 0.829335 | 5.452025e-55 | 5.564000e-52 |
MsG0180004299.01 | MsG0580025526.01 | 0.816640 | 4.983623e-52 | 3.550793e-49 |
MsG0180004475.01 | MsG0580025526.01 | 0.845658 | 3.539269e-59 | 5.940779e-56 |
MsG0180004972.01 | MsG0580025526.01 | 0.834533 | 2.836250e-56 | 3.375691e-53 |
MsG0180005048.01 | MsG0580025526.01 | 0.808505 | 2.996672e-50 | 1.716449e-47 |
MsG0180006133.01 | MsG0580025526.01 | 0.804424 | 2.175077e-49 | 1.121012e-46 |
MsG0280006398.01 | MsG0580025526.01 | 0.809763 | 1.611534e-50 | 9.544254e-48 |
MsG0280011331.01 | MsG0580025526.01 | 0.822480 | 2.316623e-53 | 1.941359e-50 |
MsG0380014666.01 | MsG0580025526.01 | 0.828424 | 9.061924e-55 | 9.003697e-52 |
MsG0480020398.01 | MsG0580025526.01 | 0.817492 | 3.206688e-52 | 2.338779e-49 |
MsG0480020856.01 | MsG0580025526.01 | 0.817633 | 2.979843e-52 | 2.181689e-49 |
MsG0480021301.01 | MsG0580025526.01 | 0.801266 | 9.766788e-49 | 4.644045e-46 |
MsG0480022991.01 | MsG0580025526.01 | 0.808085 | 3.683665e-50 | 2.086726e-47 |
MsG0480023484.01 | MsG0580025526.01 | 0.855888 | 4.662709e-62 | 1.092633e-58 |
MsG0480023706.01 | MsG0580025526.01 | 0.818396 | 2.003626e-52 | 1.498156e-49 |
MsG0580024787.01 | MsG0580025526.01 | 0.807116 | 5.913826e-50 | 3.266361e-47 |
MsG0580025093.01 | MsG0580025526.01 | 0.800392 | 1.472321e-48 | 6.847647e-46 |
MsG0580025177.01 | MsG0580025526.01 | 0.806753 | 7.057126e-50 | 3.861454e-47 |
MsG0580025526.01 | MsG0580028927.01 | 0.825458 | 4.637657e-54 | 4.229224e-51 |
MsG0580025526.01 | MsG0580029044.01 | 0.806634 | 7.479840e-50 | 4.079963e-47 |
MsG0580025526.01 | MsG0580029591.01 | 0.815418 | 9.338309e-52 | 6.434768e-49 |
MsG0580025526.01 | MsG0580030179.01 | 0.800737 | 1.252512e-48 | 5.876424e-46 |
MsG0580025526.01 | MsG0680034764.01 | 0.831265 | 1.841056e-55 | 1.987523e-52 |
MsG0580025526.01 | MsG0680035776.01 | 0.851853 | 6.771360e-61 | 1.388699e-57 |
MsG0580025526.01 | MsG0780040364.01 | 0.808578 | 2.891047e-50 | 1.659064e-47 |
MsG0580025526.01 | MsG0780040641.01 | 0.803879 | 2.823064e-49 | 1.434906e-46 |
MsG0580025526.01 | MsG0780040899.01 | 0.801634 | 8.207076e-49 | 3.938844e-46 |
MsG0580025526.01 | MsG0880041930.01 | 0.829834 | 4.123376e-55 | 4.269977e-52 |
MsG0580025526.01 | MsG0880044103.01 | 0.853284 | 2.645292e-61 | 5.686189e-58 |
MsG0580025526.01 | MsG0880044437.01 | 0.809871 | 1.527298e-50 | 9.070699e-48 |
MsG0580025526.01 | MsG0880045439.01 | 0.804210 | 2.410009e-49 | 1.235302e-46 |
MsG0580025526.01 | MsG0880045584.01 | 0.809532 | 1.806328e-50 | 1.063215e-47 |
MsG0380015058.01 | MsG0580025526.01 | 0.802627 | 5.128619e-49 | 2.524375e-46 |
MsG0380015219.01 | MsG0580025526.01 | 0.824086 | 9.764109e-54 | 8.562249e-51 |
MsG0380015394.01 | MsG0580025526.01 | 0.821880 | 3.190484e-53 | 2.628405e-50 |
MsG0380016092.01 | MsG0580025526.01 | 0.831841 | 1.328109e-55 | 1.458724e-52 |
MsG0380016217.01 | MsG0580025526.01 | 0.858002 | 1.110831e-62 | 2.794092e-59 |
MsG0380016856.01 | MsG0580025526.01 | 0.807372 | 5.221356e-50 | 2.903139e-47 |
MsG0380017128.01 | MsG0580025526.01 | 0.818317 | 2.088317e-52 | 1.557948e-49 |
MsG0380017332.01 | MsG0580025526.01 | 0.834847 | 2.364733e-56 | 2.840773e-53 |
MsG0380017361.01 | MsG0580025526.01 | 0.801437 | 9.007618e-49 | 4.301623e-46 |
MsG0380017632.01 | MsG0580025526.01 | 0.808993 | 2.356537e-50 | 1.367224e-47 |
MsG0480018228.01 | MsG0580025526.01 | 0.809588 | 1.756684e-50 | 1.035584e-47 |
MsG0280006563.01 | MsG0580025526.01 | 0.808676 | 2.754923e-50 | 1.584970e-47 |
MsG0280007003.01 | MsG0580025526.01 | 0.830796 | 2.399822e-55 | 2.555225e-52 |
MsG0280007431.01 | MsG0580025526.01 | 0.802589 | 5.221833e-49 | 2.567799e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025526.01.T01 | MTR_5g030360 | 89.655 | 725 | 61 | 5 | 1 | 721 | 1 | 715 | 0.0 | 1221 |
MsG0580025526.01.T01 | MTR_5g430360 | 92.586 | 553 | 34 | 2 | 170 | 721 | 1 | 547 | 0.0 | 1009 |
MsG0580025526.01.T01 | MTR_6g022300 | 70.650 | 569 | 134 | 9 | 146 | 705 | 60 | 604 | 0.0 | 742 |
MsG0580025526.01.T01 | MTR_6g022310 | 58.104 | 728 | 193 | 14 | 18 | 705 | 1 | 656 | 0.0 | 716 |
MsG0580025526.01.T01 | MTR_6g022290 | 67.430 | 568 | 130 | 10 | 153 | 712 | 27 | 547 | 0.0 | 707 |
MsG0580025526.01.T01 | MTR_8g067060 | 52.198 | 364 | 155 | 5 | 105 | 466 | 162 | 508 | 5.84e-114 | 355 |
MsG0580025526.01.T01 | MTR_8g471100 | 52.198 | 364 | 155 | 5 | 105 | 466 | 171 | 517 | 8.71e-114 | 355 |
MsG0580025526.01.T01 | MTR_8g064910 | 47.988 | 323 | 152 | 6 | 152 | 466 | 51 | 365 | 1.66e-91 | 292 |
MsG0580025526.01.T01 | MTR_4g130940 | 42.902 | 317 | 156 | 7 | 153 | 455 | 90 | 395 | 2.07e-74 | 257 |
MsG0580025526.01.T01 | MTR_4g130940 | 42.902 | 317 | 156 | 7 | 153 | 455 | 90 | 395 | 4.10e-74 | 257 |
MsG0580025526.01.T01 | MTR_0279s0020 | 40.064 | 312 | 166 | 8 | 160 | 467 | 1 | 295 | 2.13e-62 | 211 |
MsG0580025526.01.T01 | MTR_0279s0020 | 39.032 | 310 | 168 | 8 | 151 | 456 | 1 | 293 | 1.02e-60 | 208 |
MsG0580025526.01.T01 | MTR_4g111860 | 34.516 | 310 | 192 | 5 | 155 | 457 | 87 | 392 | 6.62e-55 | 195 |
MsG0580025526.01.T01 | MTR_1g014680 | 34.700 | 317 | 180 | 9 | 155 | 455 | 181 | 486 | 7.31e-49 | 185 |
MsG0580025526.01.T01 | MTR_2g070390 | 33.439 | 314 | 187 | 6 | 156 | 455 | 23 | 328 | 3.72e-48 | 181 |
MsG0580025526.01.T01 | MTR_3g100480 | 34.286 | 315 | 181 | 9 | 156 | 455 | 585 | 888 | 3.33e-47 | 181 |
MsG0580025526.01.T01 | MTR_5g032380 | 34.395 | 314 | 182 | 9 | 156 | 456 | 425 | 727 | 1.08e-46 | 179 |
MsG0580025526.01.T01 | MTR_2g071620 | 35.443 | 316 | 177 | 9 | 156 | 455 | 465 | 769 | 8.44e-46 | 176 |
MsG0580025526.01.T01 | MTR_5g066000 | 33.968 | 315 | 181 | 10 | 156 | 455 | 543 | 845 | 1.26e-44 | 173 |
MsG0580025526.01.T01 | MTR_3g100480 | 32.070 | 343 | 181 | 10 | 156 | 455 | 585 | 918 | 1.45e-43 | 170 |
MsG0580025526.01.T01 | MTR_1g014260 | 31.609 | 348 | 187 | 10 | 156 | 456 | 182 | 525 | 4.11e-40 | 157 |
MsG0580025526.01.T01 | MTR_8g090190 | 31.714 | 350 | 182 | 10 | 156 | 457 | 24 | 364 | 4.32e-38 | 146 |
MsG0580025526.01.T01 | MTR_3g087140 | 30.058 | 346 | 185 | 9 | 156 | 453 | 24 | 360 | 2.65e-36 | 140 |
MsG0580025526.01.T01 | MTR_4g115880 | 27.877 | 391 | 185 | 14 | 156 | 456 | 198 | 581 | 5.69e-36 | 144 |
MsG0580025526.01.T01 | MTR_1g010040 | 29.236 | 301 | 174 | 9 | 155 | 438 | 107 | 385 | 8.66e-24 | 107 |
MsG0580025526.01.T01 | MTR_1g010040 | 29.236 | 301 | 174 | 9 | 155 | 438 | 107 | 385 | 9.34e-24 | 107 |
MsG0580025526.01.T01 | MTR_2g060050 | 26.479 | 355 | 200 | 11 | 156 | 455 | 183 | 531 | 1.76e-23 | 105 |
MsG0580025526.01.T01 | MTR_3g108660 | 27.919 | 394 | 244 | 14 | 60 | 438 | 17 | 385 | 7.18e-23 | 105 |
MsG0580025526.01.T01 | MTR_3g108660 | 27.919 | 394 | 244 | 14 | 60 | 438 | 17 | 385 | 1.16e-22 | 104 |
MsG0580025526.01.T01 | MTR_5g086700 | 27.451 | 306 | 195 | 12 | 142 | 437 | 195 | 483 | 1.18e-21 | 101 |
MsG0580025526.01.T01 | MTR_5g086700 | 27.451 | 306 | 195 | 12 | 142 | 437 | 195 | 483 | 1.21e-21 | 101 |
MsG0580025526.01.T01 | MTR_3g079840 | 27.215 | 316 | 203 | 13 | 142 | 447 | 191 | 489 | 1.37e-21 | 100 |
MsG0580025526.01.T01 | MTR_3g079840 | 27.215 | 316 | 203 | 13 | 142 | 447 | 190 | 488 | 1.43e-21 | 100 |
MsG0580025526.01.T01 | MTR_1g041240 | 27.063 | 303 | 198 | 12 | 155 | 447 | 200 | 489 | 9.22e-21 | 98.2 |
MsG0580025526.01.T01 | MTR_1g041240 | 27.063 | 303 | 198 | 12 | 155 | 447 | 201 | 490 | 1.05e-20 | 98.2 |
MsG0580025526.01.T01 | MTR_1g041240 | 27.063 | 303 | 198 | 12 | 155 | 447 | 199 | 488 | 1.08e-20 | 98.2 |
MsG0580025526.01.T01 | MTR_2g087710 | 35.135 | 148 | 90 | 4 | 311 | 455 | 717 | 861 | 1.17e-16 | 85.1 |
MsG0580025526.01.T01 | MTR_1g077980 | 36.842 | 152 | 89 | 5 | 311 | 458 | 765 | 913 | 1.36e-16 | 84.7 |
MsG0580025526.01.T01 | MTR_7g088760 | 34.211 | 152 | 94 | 5 | 311 | 458 | 754 | 903 | 5.72e-16 | 82.8 |
MsG0580025526.01.T01 | MTR_7g088760 | 34.211 | 152 | 94 | 5 | 311 | 458 | 771 | 920 | 6.09e-16 | 82.8 |
MsG0580025526.01.T01 | MTR_3g083600 | 35.156 | 128 | 68 | 3 | 342 | 455 | 943 | 1069 | 1.12e-14 | 78.6 |
MsG0580025526.01.T01 | MTR_3g083600 | 29.231 | 195 | 102 | 5 | 136 | 306 | 202 | 384 | 3.93e-12 | 70.5 |
MsG0580025526.01.T01 | MTR_7g106570 | 33.108 | 148 | 94 | 4 | 311 | 455 | 742 | 887 | 1.53e-12 | 71.6 |
MsG0580025526.01.T01 | MTR_4g077490 | 24.691 | 324 | 208 | 12 | 155 | 456 | 234 | 543 | 1.93e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025526.01.T01 | AT4G17895 | 52.078 | 361 | 155 | 4 | 135 | 486 | 155 | 506 | 2.31e-115 | 363 |
MsG0580025526.01.T01 | AT5G46740 | 38.151 | 595 | 305 | 14 | 147 | 696 | 155 | 731 | 5.21e-104 | 334 |
MsG0580025526.01.T01 | AT5G46740 | 37.266 | 534 | 276 | 13 | 208 | 696 | 3 | 522 | 5.84e-85 | 278 |
MsG0580025526.01.T01 | AT5G57990 | 42.857 | 315 | 158 | 6 | 153 | 455 | 105 | 409 | 5.67e-76 | 262 |
MsG0580025526.01.T01 | AT5G65450 | 34.824 | 313 | 181 | 8 | 156 | 455 | 330 | 632 | 5.40e-48 | 181 |
MsG0580025526.01.T01 | AT4G31670 | 34.700 | 317 | 180 | 9 | 155 | 455 | 168 | 473 | 5.71e-48 | 180 |
MsG0580025526.01.T01 | AT3G14400 | 34.591 | 318 | 182 | 7 | 156 | 455 | 25 | 334 | 7.75e-48 | 180 |
MsG0580025526.01.T01 | AT5G65450 | 34.824 | 313 | 181 | 8 | 156 | 455 | 349 | 651 | 8.71e-48 | 181 |
MsG0580025526.01.T01 | AT2G24640 | 32.603 | 365 | 212 | 11 | 107 | 455 | 133 | 479 | 9.26e-48 | 180 |
MsG0580025526.01.T01 | AT2G24640 | 34.385 | 317 | 181 | 9 | 155 | 455 | 4 | 309 | 2.81e-47 | 175 |
MsG0580025526.01.T01 | AT1G17110 | 33.333 | 345 | 192 | 12 | 130 | 455 | 422 | 747 | 1.84e-43 | 169 |
MsG0580025526.01.T01 | AT1G17110 | 33.333 | 345 | 192 | 12 | 130 | 455 | 418 | 743 | 1.85e-43 | 169 |
MsG0580025526.01.T01 | AT1G17110 | 33.333 | 345 | 192 | 12 | 130 | 455 | 418 | 743 | 1.85e-43 | 169 |
MsG0580025526.01.T01 | AT4G24560 | 31.646 | 316 | 188 | 10 | 156 | 455 | 543 | 846 | 2.17e-39 | 157 |
MsG0580025526.01.T01 | AT2G22310 | 31.339 | 351 | 183 | 12 | 156 | 458 | 24 | 364 | 2.91e-34 | 135 |
MsG0580025526.01.T01 | AT4G39910 | 30.532 | 357 | 181 | 12 | 156 | 457 | 24 | 368 | 5.07e-34 | 134 |
MsG0580025526.01.T01 | AT5G10790 | 28.056 | 360 | 194 | 12 | 156 | 456 | 49 | 402 | 1.81e-29 | 122 |
MsG0580025526.01.T01 | AT2G22310 | 30.383 | 339 | 178 | 12 | 168 | 458 | 4 | 332 | 3.66e-28 | 116 |
MsG0580025526.01.T01 | AT5G10790 | 28.056 | 360 | 194 | 12 | 156 | 456 | 178 | 531 | 4.25e-28 | 120 |
MsG0580025526.01.T01 | AT2G22310 | 31.690 | 284 | 141 | 9 | 223 | 458 | 49 | 327 | 4.59e-28 | 116 |
MsG0580025526.01.T01 | AT4G30890 | 26.158 | 367 | 190 | 9 | 156 | 455 | 198 | 550 | 1.26e-25 | 112 |
MsG0580025526.01.T01 | AT4G30890 | 26.158 | 367 | 190 | 9 | 156 | 455 | 198 | 550 | 1.26e-25 | 112 |
MsG0580025526.01.T01 | AT4G30890 | 26.158 | 367 | 190 | 9 | 156 | 455 | 198 | 550 | 1.26e-25 | 112 |
MsG0580025526.01.T01 | AT3G11910 | 28.105 | 306 | 193 | 13 | 142 | 437 | 188 | 476 | 2.67e-23 | 106 |
MsG0580025526.01.T01 | AT3G11910 | 28.105 | 306 | 193 | 13 | 142 | 437 | 188 | 476 | 2.67e-23 | 106 |
MsG0580025526.01.T01 | AT3G11910 | 28.105 | 306 | 193 | 13 | 142 | 437 | 189 | 477 | 2.74e-23 | 106 |
MsG0580025526.01.T01 | AT3G11910 | 28.105 | 306 | 193 | 13 | 142 | 437 | 189 | 477 | 2.74e-23 | 106 |
MsG0580025526.01.T01 | AT5G06600 | 28.105 | 306 | 193 | 13 | 142 | 437 | 190 | 478 | 1.43e-22 | 104 |
MsG0580025526.01.T01 | AT5G06600 | 28.105 | 306 | 193 | 13 | 142 | 437 | 189 | 477 | 1.46e-22 | 103 |
MsG0580025526.01.T01 | AT5G06600 | 28.105 | 306 | 193 | 13 | 142 | 437 | 190 | 478 | 1.60e-22 | 103 |
MsG0580025526.01.T01 | AT3G49600 | 27.703 | 296 | 188 | 9 | 155 | 440 | 106 | 385 | 1.97e-20 | 97.4 |
MsG0580025526.01.T01 | AT3G49600 | 27.703 | 296 | 188 | 9 | 155 | 440 | 106 | 385 | 1.97e-20 | 97.4 |
MsG0580025526.01.T01 | AT3G49600 | 27.703 | 296 | 188 | 9 | 155 | 440 | 106 | 385 | 2.07e-20 | 97.1 |
MsG0580025526.01.T01 | AT5G22030 | 35.811 | 148 | 90 | 4 | 311 | 455 | 723 | 868 | 6.61e-18 | 89.0 |
MsG0580025526.01.T01 | AT5G22030 | 35.811 | 148 | 90 | 4 | 311 | 455 | 765 | 910 | 7.57e-18 | 89.0 |
MsG0580025526.01.T01 | AT2G40930 | 34.667 | 150 | 92 | 5 | 311 | 456 | 769 | 916 | 1.01e-16 | 85.1 |
MsG0580025526.01.T01 | AT2G40930 | 34.667 | 150 | 92 | 5 | 311 | 456 | 769 | 916 | 1.01e-16 | 85.1 |
MsG0580025526.01.T01 | AT4G10590 | 38.255 | 149 | 85 | 5 | 311 | 455 | 748 | 893 | 3.22e-16 | 83.6 |
MsG0580025526.01.T01 | AT4G10590 | 38.255 | 149 | 85 | 5 | 311 | 455 | 748 | 893 | 3.22e-16 | 83.6 |
MsG0580025526.01.T01 | AT4G10590 | 38.255 | 149 | 85 | 5 | 311 | 455 | 748 | 893 | 3.22e-16 | 83.6 |
MsG0580025526.01.T01 | AT4G10590 | 38.255 | 149 | 85 | 5 | 311 | 455 | 748 | 893 | 3.22e-16 | 83.6 |
MsG0580025526.01.T01 | AT4G10570 | 38.255 | 149 | 85 | 6 | 311 | 455 | 749 | 894 | 1.45e-15 | 81.6 |
MsG0580025526.01.T01 | AT4G10570 | 29.630 | 216 | 113 | 6 | 138 | 319 | 285 | 495 | 1.33e-11 | 68.6 |
MsG0580025526.01.T01 | AT1G32850 | 36.913 | 149 | 87 | 6 | 311 | 455 | 734 | 879 | 1.76e-15 | 81.3 |
MsG0580025526.01.T01 | AT1G04860 | 33.951 | 162 | 84 | 4 | 156 | 304 | 232 | 383 | 2.50e-13 | 74.3 |
MsG0580025526.01.T01 | AT1G04860 | 31.452 | 124 | 74 | 3 | 342 | 455 | 834 | 956 | 1.03e-11 | 68.9 |
MsG0580025526.01.T01 | AT2G32780 | 29.518 | 166 | 94 | 4 | 156 | 306 | 203 | 360 | 1.36e-11 | 68.9 |
MsG0580025526.01.T01 | AT4G22350 | 24.149 | 323 | 210 | 11 | 155 | 456 | 229 | 537 | 3.42e-11 | 67.0 |
MsG0580025526.01.T01 | AT4G22350 | 24.149 | 323 | 210 | 11 | 155 | 456 | 200 | 508 | 3.56e-11 | 66.6 |
Find 159 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCATAAACTTCATCCTTTA+AGG | 0.041402 | 5:+19999120 | None:intergenic |
ACCTTTAGATTGGGAATTTC+AGG | 0.151939 | 5:-19998328 | MsG0580025526.01.T01:intron |
CTGTCTTAAACCTCTTTAAA+TGG | 0.207305 | 5:+19997547 | None:intergenic |
AGTTAATTCTACTCGGATTT+TGG | 0.210552 | 5:-19999218 | MsG0580025526.01.T01:CDS |
TGCTCAATTGGGTATTTCTT+TGG | 0.217652 | 5:-19999428 | MsG0580025526.01.T01:CDS |
AAACAGTCCTTGCAGTTTAC+TGG | 0.245751 | 5:-19998262 | MsG0580025526.01.T01:CDS |
AGACTTCTCAGAAAATTCTT+TGG | 0.249608 | 5:+19996712 | None:intergenic |
ATTGAGAGAAAGAGAAGTTT+AGG | 0.251577 | 5:+19999585 | None:intergenic |
ATGGTGATTTGTCAGATATT+TGG | 0.280681 | 5:-19999279 | MsG0580025526.01.T01:CDS |
AGTTTCTGAGCCTGAGGATA+TGG | 0.283386 | 5:-19999362 | MsG0580025526.01.T01:CDS |
AATATTGTGAAGAAAGTCTT+TGG | 0.320644 | 5:-19997904 | MsG0580025526.01.T01:CDS |
AACCGTAGATCCTGCTCAAT+TGG | 0.346549 | 5:-19999440 | MsG0580025526.01.T01:CDS |
TATGATTCTGATTCTAAAGT+TGG | 0.348463 | 5:-19999103 | MsG0580025526.01.T01:CDS |
TTGGGAATTTCAGGTCATAA+TGG | 0.374228 | 5:-19998319 | MsG0580025526.01.T01:CDS |
TGAAATGATGAAACAAATAG+AGG | 0.376376 | 5:+19999652 | None:intergenic |
AAAATCCGAGTAGAATTAAC+TGG | 0.376969 | 5:+19999220 | None:intergenic |
TCAAATGATCGCGTGAGATC+TGG | 0.390392 | 5:+19996278 | None:intergenic |
TGGGAATTTCAGGTCATAAT+GGG | 0.391890 | 5:-19998318 | MsG0580025526.01.T01:CDS |
TGCCGCAAACAAGTTCCTGC+TGG | 0.392129 | 5:-19996626 | MsG0580025526.01.T01:CDS |
GAAAGTCTTTGGAGGCAGTT+TGG | 0.392748 | 5:-19997893 | MsG0580025526.01.T01:CDS |
TATGCAGTTGTTGTGCATAA+TGG | 0.393951 | 5:-19997335 | MsG0580025526.01.T01:CDS |
GGCAGCTACCCTGTGGCAGC+TGG | 0.397430 | 5:-19996025 | MsG0580025526.01.T01:CDS |
AGCAGTGCTCGCAAGAAATC+AGG | 0.399732 | 5:-19996061 | MsG0580025526.01.T01:CDS |
CTGCAATGAAGAAGTGTCTA+TGG | 0.405794 | 5:-19997613 | MsG0580025526.01.T01:CDS |
TTCTGATTTGATGGCCCAGC+AGG | 0.410077 | 5:+19996611 | None:intergenic |
TCCGGTGGATACCAAGCTTC+CGG | 0.412997 | 5:+19999187 | None:intergenic |
AAAACCAAGGTGTGCCTTGT+CGG | 0.413813 | 5:+19996879 | None:intergenic |
GTGAATTATGCCAGCCCGAC+TGG | 0.419613 | 5:-19996539 | MsG0580025526.01.T01:CDS |
CGAGTAGAATTAACTGGAAC+CGG | 0.424615 | 5:+19999226 | None:intergenic |
ATGATTCTGATTCTAAAGTT+GGG | 0.433621 | 5:-19999102 | MsG0580025526.01.T01:CDS |
TACAACCAGTTCTCATCATC+AGG | 0.433784 | 5:+19999157 | None:intergenic |
GACGTTTATGTTGATGTTGT+CGG | 0.434418 | 5:-19999385 | MsG0580025526.01.T01:CDS |
TGGCTGTGCCGCCGGAAGCT+TGG | 0.438381 | 5:-19999198 | MsG0580025526.01.T01:CDS |
TCCTCTTACTCACCATCATT+AGG | 0.442960 | 5:+19998469 | None:intergenic |
AAATAGAAAATGATTTATCC+TGG | 0.443696 | 5:+19996771 | None:intergenic |
CTTTGCAATGCCAGTCGGGC+TGG | 0.444918 | 5:+19996529 | None:intergenic |
CGGTTCCAGTTAATTCTACT+CGG | 0.445652 | 5:-19999225 | MsG0580025526.01.T01:CDS |
GATTTGTCAGATATTTGGCC+GGG | 0.446194 | 5:-19999274 | MsG0580025526.01.T01:CDS |
GCTGCTGTCTTTGTCCGACT+TGG | 0.449405 | 5:+19996081 | None:intergenic |
AGATATTTGGCCGGGGCCGA+TGG | 0.453647 | 5:-19999266 | MsG0580025526.01.T01:CDS |
AAATGGAATGCAGCAATTGA+AGG | 0.458769 | 5:+19997564 | None:intergenic |
CAGGCTTTGCAATGCCAGTC+GGG | 0.460520 | 5:+19996525 | None:intergenic |
AAGCTGCCAGGGCATATGTT+AGG | 0.462405 | 5:-19996186 | MsG0580025526.01.T01:CDS |
GGTAATTATTCAGGTAACTA+AGG | 0.467491 | 5:-19996951 | MsG0580025526.01.T01:intron |
TGAAGGGACTGTGCTGTCTC+AGG | 0.467824 | 5:-19996924 | MsG0580025526.01.T01:CDS |
TATCAATTTCCCACTGGAGT+TGG | 0.469397 | 5:-19997493 | MsG0580025526.01.T01:CDS |
AATGGAACTTCATCTGACTC+TGG | 0.470300 | 5:-19997317 | MsG0580025526.01.T01:CDS |
AAACCAAGGTGTGCCTTGTC+GGG | 0.471326 | 5:+19996880 | None:intergenic |
GTTTCTGAGCCTGAGGATAT+GGG | 0.471454 | 5:-19999361 | MsG0580025526.01.T01:CDS |
CATAATTCACAGGTAGCACT+TGG | 0.473153 | 5:+19996552 | None:intergenic |
ACCGTAGATCCTGCTCAATT+GGG | 0.475265 | 5:-19999439 | MsG0580025526.01.T01:CDS |
AGCTGCCATTCTCCTAATGA+TGG | 0.476167 | 5:-19998481 | MsG0580025526.01.T01:CDS |
GCAAAAGTTGGATGATTCAA+TGG | 0.479441 | 5:-19997255 | MsG0580025526.01.T01:intron |
AATATTGAAAAGAGTGGGGC+TGG | 0.480181 | 5:-19996740 | MsG0580025526.01.T01:CDS |
TTGCTGCATTCCATTTAAAG+AGG | 0.480468 | 5:-19997557 | MsG0580025526.01.T01:CDS |
AATGAAAATATTGAAAAGAG+TGG | 0.488221 | 5:-19996746 | MsG0580025526.01.T01:CDS |
ATGAAAATATTGAAAAGAGT+GGG | 0.488375 | 5:-19996745 | MsG0580025526.01.T01:CDS |
TTTAGACATCACTGATGGCC+AGG | 0.488436 | 5:-19996789 | MsG0580025526.01.T01:CDS |
GAAGAAATGAAATTCTTGGT+TGG | 0.491050 | 5:+19999613 | None:intergenic |
ATCTCGCTGCGGAACATCAC+CGG | 0.496487 | 5:+19999303 | None:intergenic |
CAAAAGAAGACCCTCGACTA+GGG | 0.498254 | 5:+19998504 | None:intergenic |
TCTAGACTTAGGTCAATCAA+TGG | 0.498501 | 5:+19997720 | None:intergenic |
CTCTCTATTATCTTCTCTCG+TGG | 0.500752 | 5:+19999794 | None:intergenic |
GCCCAGCAGGAACTTGTTTG+CGG | 0.500874 | 5:+19996624 | None:intergenic |
AGATACTATTTCAAGTGCAT+TGG | 0.502024 | 5:-19997685 | MsG0580025526.01.T01:CDS |
ATCCTCAAAATAAAGCTGCC+AGG | 0.504847 | 5:-19996198 | MsG0580025526.01.T01:CDS |
ACAGCAAGATCCATCGGCCC+CGG | 0.506375 | 5:+19999256 | None:intergenic |
GATGTTCCGCAGCGAGATCA+TGG | 0.509643 | 5:-19999298 | MsG0580025526.01.T01:CDS |
AAATCTTCATTTGAATGGAT+CGG | 0.510400 | 5:-19996588 | MsG0580025526.01.T01:CDS |
CCGACTGGCATTGCAAAGCC+TGG | 0.513078 | 5:-19996524 | MsG0580025526.01.T01:CDS |
ATCATCATCAGGCAAGTCTT+CGG | 0.514591 | 5:-19996224 | MsG0580025526.01.T01:CDS |
ATGCTCCTGATGATGAGAAC+TGG | 0.515150 | 5:-19999162 | MsG0580025526.01.T01:CDS |
AGTGGTAAAAGATCATCATC+AGG | 0.517890 | 5:-19996235 | MsG0580025526.01.T01:CDS |
TATCTCCCCTGTGGTATTCG+TGG | 0.519071 | 5:-19998233 | MsG0580025526.01.T01:CDS |
TCATCATCAGGAGCATAATC+CGG | 0.519460 | 5:+19999169 | None:intergenic |
CCAGGCTTTGCAATGCCAGT+CGG | 0.519525 | 5:+19996524 | None:intergenic |
AAAGCATGTGTTACCAAGGT+TGG | 0.521069 | 5:+19998564 | None:intergenic |
TGTGAAACTCCAGCTGCCAC+AGG | 0.523773 | 5:+19996016 | None:intergenic |
ACTCACCATCATTAGGAGAA+TGG | 0.528124 | 5:+19998476 | None:intergenic |
GCCGCAAACAAGTTCCTGCT+GGG | 0.528262 | 5:-19996625 | MsG0580025526.01.T01:CDS |
TGGAGGCAGTTTGGTTAGCA+AGG | 0.528538 | 5:-19997884 | MsG0580025526.01.T01:intron |
TGAGTTTATGCAGTGTGCAT+TGG | 0.528922 | 5:-19997965 | MsG0580025526.01.T01:CDS |
CAATCACCTGGAGTCTGAGA+AGG | 0.530275 | 5:+19996389 | None:intergenic |
TTAGGAATATGCCTGGTTCA+AGG | 0.531245 | 5:-19996168 | MsG0580025526.01.T01:CDS |
GTCGGGCTGGCATAATTCAC+AGG | 0.532843 | 5:+19996542 | None:intergenic |
TCAAAAGAAGACCCTCGACT+AGG | 0.540121 | 5:+19998503 | None:intergenic |
CTGGCATTGCAAAGCCTGGT+GGG | 0.544914 | 5:-19996520 | MsG0580025526.01.T01:CDS |
AATCACCTGGAGTCTGAGAA+GGG | 0.545095 | 5:+19996390 | None:intergenic |
ACCCAATTGAGCAGGATCTA+CGG | 0.547215 | 5:+19999438 | None:intergenic |
GGTAGCTGCCGACGGAAGCA+TGG | 0.550788 | 5:+19996038 | None:intergenic |
TGATTTGTCAGATATTTGGC+CGG | 0.551375 | 5:-19999275 | MsG0580025526.01.T01:CDS |
TTGGTTAAGCCCATATCCTC+AGG | 0.551945 | 5:+19999352 | None:intergenic |
GCCGGAAGCTTGGTATCCAC+CGG | 0.552170 | 5:-19999188 | MsG0580025526.01.T01:CDS |
CAGGTAACTAAGGTATCTGA+AGG | 0.552413 | 5:-19996941 | MsG0580025526.01.T01:CDS |
TATGGAGAAGCAGCTTATGT+TGG | 0.552768 | 5:-19997595 | MsG0580025526.01.T01:CDS |
AGTGATGTCTAAAACAGACT+TGG | 0.553424 | 5:+19996799 | None:intergenic |
AAAACGCTTACAATCGTCAA+TGG | 0.553452 | 5:+19999079 | None:intergenic |
GGAGCTGGGCTTGCCAACCT+TGG | 0.555047 | 5:-19998577 | MsG0580025526.01.T01:CDS |
ATGGAACTTCATCTGACTCT+GGG | 0.557189 | 5:-19997316 | MsG0580025526.01.T01:CDS |
TCCAGACACATGGCAAAAGT+TGG | 0.557241 | 5:-19997267 | MsG0580025526.01.T01:CDS |
ACAGAGAAGCAAGGAAGTAG+TGG | 0.558974 | 5:-19996253 | MsG0580025526.01.T01:CDS |
ACCTGGAGTCTGAGAAGGGG+GGG | 0.559134 | 5:+19996394 | None:intergenic |
TGCCACAGGGTAGCTGCCGA+CGG | 0.563195 | 5:+19996030 | None:intergenic |
GCATACTGTGCCCCTAGTCG+AGG | 0.564517 | 5:-19998515 | MsG0580025526.01.T01:CDS |
AAATTATCCACGAATACCAC+AGG | 0.565734 | 5:+19998226 | None:intergenic |
TCAGCATATGAACTCCCACC+AGG | 0.567820 | 5:+19996506 | None:intergenic |
GCAGGAACTTGTTTGCGGCA+AGG | 0.568113 | 5:+19996629 | None:intergenic |
TCACCTGGAGTCTGAGAAGG+GGG | 0.569077 | 5:+19996392 | None:intergenic |
TCCTCAAAATAAAGCTGCCA+GGG | 0.569220 | 5:-19996197 | MsG0580025526.01.T01:CDS |
AAAGAAATACCCAATTGAGC+AGG | 0.570044 | 5:+19999430 | None:intergenic |
GAAATGATGAAACAAATAGA+GGG | 0.571804 | 5:+19999653 | None:intergenic |
CACAGACATAAACTCATCGT+TGG | 0.578678 | 5:+19999333 | None:intergenic |
CATATTCCTAACATATGCCC+TGG | 0.580915 | 5:+19996180 | None:intergenic |
GCATATGTTAGGAATATGCC+TGG | 0.584399 | 5:-19996175 | MsG0580025526.01.T01:CDS |
CAAGCATATCAATTTCCCAC+TGG | 0.585157 | 5:-19997499 | MsG0580025526.01.T01:CDS |
ATTGTGAAGAAAGTCTTTGG+AGG | 0.585535 | 5:-19997901 | MsG0580025526.01.T01:CDS |
TGCATTGGAGTCTTTCACAA+TGG | 0.585606 | 5:-19997670 | MsG0580025526.01.T01:CDS |
AATGCACCTCTCCTTGAACC+AGG | 0.588351 | 5:+19996157 | None:intergenic |
TTCGCACTGCTCCAGACACA+TGG | 0.588758 | 5:-19997277 | MsG0580025526.01.T01:CDS |
GCATACACAGCAAGATCCAT+CGG | 0.590600 | 5:+19999250 | None:intergenic |
TGAAAATATTGAAAAGAGTG+GGG | 0.594431 | 5:-19996744 | MsG0580025526.01.T01:CDS |
GGATCTTGCTGTGTATGCTC+CGG | 0.600782 | 5:-19999245 | MsG0580025526.01.T01:CDS |
ATTTGTCAGATATTTGGCCG+GGG | 0.604300 | 5:-19999273 | MsG0580025526.01.T01:CDS |
GTGATGTCTAAAACAGACTT+GGG | 0.604740 | 5:+19996800 | None:intergenic |
ATGCCCGACAAGGCACACCT+TGG | 0.606806 | 5:-19996883 | MsG0580025526.01.T01:CDS |
TGATGCTAAGATTAAATGTG+AGG | 0.612633 | 5:-19997637 | MsG0580025526.01.T01:CDS |
ATCACCTGGAGTCTGAGAAG+GGG | 0.616978 | 5:+19996391 | None:intergenic |
TGAGAAAGCATGTGTTACCA+AGG | 0.617381 | 5:+19998560 | None:intergenic |
AACTCTTCCAGTAAACTGCA+AGG | 0.624220 | 5:+19998255 | None:intergenic |
AAAGACTGATTCATCCAAGT+CGG | 0.626726 | 5:-19996095 | MsG0580025526.01.T01:CDS |
GCTCATTAGTGTCAGAAGAG+TGG | 0.628120 | 5:+19997742 | None:intergenic |
AAATCAGGCCATGCTTCCGT+CGG | 0.629660 | 5:-19996046 | MsG0580025526.01.T01:CDS |
GTGAAACTCCAGCTGCCACA+GGG | 0.630296 | 5:+19996017 | None:intergenic |
ATCCTACTCAGATTCAAGCA+TGG | 0.632686 | 5:+19996833 | None:intergenic |
CATACTGTGCCCCTAGTCGA+GGG | 0.636860 | 5:-19998514 | MsG0580025526.01.T01:CDS |
AATATGCCTGGTTCAAGGAG+AGG | 0.638632 | 5:-19996163 | MsG0580025526.01.T01:CDS |
GGTTGCAAATCCAACTCCAG+TGG | 0.642634 | 5:+19997483 | None:intergenic |
TTCCATGCTTGAATCTGAGT+AGG | 0.644297 | 5:-19996835 | MsG0580025526.01.T01:CDS |
ATAATTCACAGGTAGCACTT+GGG | 0.648379 | 5:+19996553 | None:intergenic |
TGTCGGAGTTTCTGAGCCTG+AGG | 0.652877 | 5:-19999368 | MsG0580025526.01.T01:CDS |
AAAAGAAGACCCTCGACTAG+GGG | 0.658717 | 5:+19998505 | None:intergenic |
TTCCGTCGGCAGCTACCCTG+TGG | 0.662854 | 5:-19996032 | MsG0580025526.01.T01:CDS |
ACTGGCATTGCAAAGCCTGG+TGG | 0.663624 | 5:-19996521 | MsG0580025526.01.T01:CDS |
GTTGCAAATCCAACTCCAGT+GGG | 0.671853 | 5:+19997484 | None:intergenic |
AGGTAACTAAGGTATCTGAA+GGG | 0.674479 | 5:-19996940 | MsG0580025526.01.T01:CDS |
TGTTGTTCTTGTTCACCACG+TGG | 0.675934 | 5:+19999508 | None:intergenic |
CACCTGGAGTCTGAGAAGGG+GGG | 0.678451 | 5:+19996393 | None:intergenic |
AGGACTGTTTCATCTGATAG+CGG | 0.680625 | 5:+19998275 | None:intergenic |
TCCGCAAAACTTGAAAACCA+AGG | 0.687758 | 5:+19996866 | None:intergenic |
TCATCAGGAGCATAATCCGG+TGG | 0.690832 | 5:+19999172 | None:intergenic |
GATGCTAAGATTAAATGTGA+GGG | 0.695012 | 5:-19997636 | MsG0580025526.01.T01:CDS |
GGTGGATACCAAGCTTCCGG+CGG | 0.695616 | 5:+19999190 | None:intergenic |
TTTATGTCTGTGATGTACAC+CGG | 0.696550 | 5:-19999322 | MsG0580025526.01.T01:CDS |
TGGAAGAGTTATCTCCCCTG+TGG | 0.704661 | 5:-19998242 | MsG0580025526.01.T01:CDS |
AATTATCCACGAATACCACA+GGG | 0.705529 | 5:+19998227 | None:intergenic |
CATTTGAAGACAGAGAAGCA+AGG | 0.707732 | 5:-19996262 | MsG0580025526.01.T01:CDS |
AAATCACCATGATCTCGCTG+CGG | 0.737924 | 5:+19999292 | None:intergenic |
TCTGATTCAAATTCACCACG+TGG | 0.785823 | 5:-19999523 | MsG0580025526.01.T01:CDS |
ATTATCCACGAATACCACAG+GGG | 0.824419 | 5:+19998228 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTAACCTTATATTAATTAA+AGG | + | Chr5:19997749-19997768 | None:intergenic | 15.0% |
!! | TAGAACCTTTAATTAATATA+AGG | - | Chr5:19997741-19997760 | MsG0580025526.01.T01:CDS | 15.0% |
!!! | TTTTGTGATTTAAATGTATA+TGG | - | Chr5:19997377-19997396 | MsG0580025526.01.T01:intron | 15.0% |
!! | AAATAGAAAATGATTTATCC+TGG | + | Chr5:19999050-19999069 | None:intergenic | 20.0% |
!! | AATGAAAATATTGAAAAGAG+TGG | - | Chr5:19999072-19999091 | MsG0580025526.01.T01:intron | 20.0% |
!! | ACATGTTTAATGATAAAAGT+TGG | - | Chr5:19998639-19998658 | MsG0580025526.01.T01:intron | 20.0% |
!! | ATGAAAATATTGAAAAGAGT+GGG | - | Chr5:19999073-19999092 | MsG0580025526.01.T01:intron | 20.0% |
!! | GCACAAACAATTAATATTAA+AGG | + | Chr5:19997164-19997183 | None:intergenic | 20.0% |
!! | TTTATTTAACACGTAATATC+TGG | - | Chr5:19998846-19998865 | MsG0580025526.01.T01:intron | 20.0% |
!!! | ACATTGAAATTTTGAAAGTT+AGG | + | Chr5:19996276-19996295 | None:intergenic | 20.0% |
!!! | CATTGAAATTTTGAAAGTTA+GGG | + | Chr5:19996275-19996294 | None:intergenic | 20.0% |
!!! | TTTTCATTCAAAATAGTGTA+AGG | + | Chr5:19998359-19998378 | None:intergenic | 20.0% |
!!! | TTTTGAAGAAATGAAATTCT+TGG | + | Chr5:19996212-19996231 | None:intergenic | 20.0% |
! | AAAAGTTTCAAAAAGTGAAG+AGG | + | Chr5:19996138-19996157 | None:intergenic | 25.0% |
! | AAAGTTTCAAAAAGTGAAGA+GGG | + | Chr5:19996137-19996156 | None:intergenic | 25.0% |
! | AAATCTTCATTTGAATGGAT+CGG | - | Chr5:19999230-19999249 | MsG0580025526.01.T01:CDS | 25.0% |
! | AATATTGTGAAGAAAGTCTT+TGG | - | Chr5:19997914-19997933 | MsG0580025526.01.T01:CDS | 25.0% |
! | AGTAGTGAGTGTTATATTAT+TGG | - | Chr5:19997707-19997726 | MsG0580025526.01.T01:CDS | 25.0% |
! | AGTTTGCAAAAACAGTAAAA+TGG | + | Chr5:19998747-19998766 | None:intergenic | 25.0% |
! | ATCATAAACTTCATCCTTTA+AGG | + | Chr5:19996701-19996720 | None:intergenic | 25.0% |
! | ATTAATTGTTTGTGCTACAT+AGG | - | Chr5:19997169-19997188 | MsG0580025526.01.T01:intron | 25.0% |
! | ATTTAGATCAAATATGTGTC+TGG | + | Chr5:19996988-19997007 | None:intergenic | 25.0% |
! | CAGAAAAATCTTCATTTGAA+TGG | - | Chr5:19999225-19999244 | MsG0580025526.01.T01:CDS | 25.0% |
! | GAAATGATGAAACAAATAGA+GGG | + | Chr5:19996168-19996187 | None:intergenic | 25.0% |
! | GAAGCTGAAAAATAAATACA+AGG | + | Chr5:19998040-19998059 | None:intergenic | 25.0% |
! | GGCTTATTTAATAATTGCAT+TGG | - | Chr5:19998805-19998824 | MsG0580025526.01.T01:intron | 25.0% |
! | GTAATATCTGGTAATTATTC+AGG | - | Chr5:19998858-19998877 | MsG0580025526.01.T01:intron | 25.0% |
! | TAGAATTGTCTGTCATTAAT+TGG | - | Chr5:19997678-19997697 | MsG0580025526.01.T01:CDS | 25.0% |
! | TATCCTTAATACCATATTCA+TGG | - | Chr5:19997621-19997640 | MsG0580025526.01.T01:CDS | 25.0% |
! | TCAGTATAAAGAATTCACAA+GGG | + | Chr5:19998422-19998441 | None:intergenic | 25.0% |
! | TGAAAATATTGAAAAGAGTG+GGG | - | Chr5:19999074-19999093 | MsG0580025526.01.T01:intron | 25.0% |
! | TGAAATGATGAAACAAATAG+AGG | + | Chr5:19996169-19996188 | None:intergenic | 25.0% |
! | TTTCCATGAATATGGTATTA+AGG | + | Chr5:19997627-19997646 | None:intergenic | 25.0% |
!! | AAAAAGTATATTCAATCACC+TGG | + | Chr5:19999444-19999463 | None:intergenic | 25.0% |
!! | ATTAATATTAAAGGTGTGTC+TGG | + | Chr5:19997155-19997174 | None:intergenic | 25.0% |
!! | GTTTTCTTTGCATATAGTTA+GGG | - | Chr5:19998784-19998803 | MsG0580025526.01.T01:intron | 25.0% |
!! | TCAATAACATCATCATTTTC+AGG | + | Chr5:19999162-19999181 | None:intergenic | 25.0% |
!! | TGTTTTCTTTGCATATAGTT+AGG | - | Chr5:19998783-19998802 | MsG0580025526.01.T01:intron | 25.0% |
!! | TTAAAGGTTCTATATTTTGC+AGG | + | Chr5:19997733-19997752 | None:intergenic | 25.0% |
!! | TTAATATTAAAGGTGTGTCT+GGG | + | Chr5:19997154-19997173 | None:intergenic | 25.0% |
!! | TTGCATATCTTTTCAATGAA+AGG | - | Chr5:19997652-19997671 | MsG0580025526.01.T01:CDS | 25.0% |
!!! | AAGATTTTGACCTTTAGATT+GGG | - | Chr5:19997481-19997500 | MsG0580025526.01.T01:CDS | 25.0% |
!!! | AGGTTAGTTTCTTTTACTTT+TGG | - | Chr5:19997761-19997780 | MsG0580025526.01.T01:CDS | 25.0% |
!!! | ATGATTCTGATTCTAAAGTT+GGG | - | Chr5:19996716-19996735 | MsG0580025526.01.T01:CDS | 25.0% |
!!! | ATGTTTTTCAAATTTTGAGG+AGG | - | Chr5:19997889-19997908 | MsG0580025526.01.T01:CDS | 25.0% |
!!! | CATTTTCTATTTCTAGACTT+AGG | + | Chr5:19998112-19998131 | None:intergenic | 25.0% |
!!! | GACATGTTTTTCAAATTTTG+AGG | - | Chr5:19997886-19997905 | MsG0580025526.01.T01:CDS | 25.0% |
!!! | GGTGATTGAATATACTTTTT+TGG | - | Chr5:19999444-19999463 | MsG0580025526.01.T01:CDS | 25.0% |
!!! | TATGATTCTGATTCTAAAGT+TGG | - | Chr5:19996715-19996734 | MsG0580025526.01.T01:CDS | 25.0% |
!!! | TCTTGGTTGGTTTTAAATTA+GGG | + | Chr5:19996195-19996214 | None:intergenic | 25.0% |
!!! | TCTTTTTTCTCTTGTTTTCT+GGG | + | Chr5:19999708-19999727 | None:intergenic | 25.0% |
!!! | TGAAGATTTTTCTGATTTGA+TGG | + | Chr5:19999219-19999238 | None:intergenic | 25.0% |
!!! | TGATTTTAAGGAATCCTTAA+AGG | - | Chr5:19996684-19996703 | MsG0580025526.01.T01:CDS | 25.0% |
!!! | TTAGTTTCTTTTACTTTTGG+TGG | - | Chr5:19997764-19997783 | MsG0580025526.01.T01:CDS | 25.0% |
!!! | TTCCTGAGACATTTTTATTT+TGG | - | Chr5:19996075-19996094 | MsG0580025526.01.T01:CDS | 25.0% |
!!! | TTCTTGGTTGGTTTTAAATT+AGG | + | Chr5:19996196-19996215 | None:intergenic | 25.0% |
AAAAGTTGGCTGTAACTTTA+TGG | - | Chr5:19998653-19998672 | MsG0580025526.01.T01:intron | 30.0% | |
AAAATCCGAGTAGAATTAAC+TGG | + | Chr5:19996601-19996620 | None:intergenic | 30.0% | |
AATCACTGATACAAAATCAC+AGG | + | Chr5:19997088-19997107 | None:intergenic | 30.0% | |
AATTCAGATCAATTGTGTGT+CGG | + | Chr5:19996900-19996919 | None:intergenic | 30.0% | |
AGACTTCTCAGAAAATTCTT+TGG | + | Chr5:19999109-19999128 | None:intergenic | 30.0% | |
AGAGGGAAAAGCTAAAAAAT+TGG | + | Chr5:19996103-19996122 | None:intergenic | 30.0% | |
ATCCAGATTAAATGTGTGTT+TGG | + | Chr5:19997063-19997082 | None:intergenic | 30.0% | |
ATGCCTGTCAACATAAAAAA+TGG | + | Chr5:19998446-19998465 | None:intergenic | 30.0% | |
ATTGAGAGAAAGAGAAGTTT+AGG | + | Chr5:19996236-19996255 | None:intergenic | 30.0% | |
CAAGAAAGTTTCCATGAATA+TGG | + | Chr5:19997635-19997654 | None:intergenic | 30.0% | |
CACCAAAATAAAAATGTCTC+AGG | + | Chr5:19996080-19996099 | None:intergenic | 30.0% | |
CATACCATTCTGAATCAAAA+AGG | + | Chr5:19997997-19998016 | None:intergenic | 30.0% | |
CTGTCTTAAACCTCTTTAAA+TGG | + | Chr5:19998274-19998293 | None:intergenic | 30.0% | |
GAAAATTCTGATACAAGTCA+TGG | + | Chr5:19997797-19997816 | None:intergenic | 30.0% | |
GAAGAAATGAAATTCTTGGT+TGG | + | Chr5:19996208-19996227 | None:intergenic | 30.0% | |
GATGCTAAGATTAAATGTGA+GGG | - | Chr5:19998182-19998201 | MsG0580025526.01.T01:intron | 30.0% | |
GGTAATTATTCAGGTAACTA+AGG | - | Chr5:19998867-19998886 | MsG0580025526.01.T01:intron | 30.0% | |
GTCAGTATAAAGAATTCACA+AGG | + | Chr5:19998423-19998442 | None:intergenic | 30.0% | |
TCTGTTATACTTGTTCTACT+TGG | - | Chr5:19998591-19998610 | MsG0580025526.01.T01:intron | 30.0% | |
TGATAAAAACAAATGCAGTC+TGG | - | Chr5:19999347-19999366 | MsG0580025526.01.T01:CDS | 30.0% | |
TGATGCTAAGATTAAATGTG+AGG | - | Chr5:19998181-19998200 | MsG0580025526.01.T01:intron | 30.0% | |
TGCCTGTCAACATAAAAAAT+GGG | + | Chr5:19998445-19998464 | None:intergenic | 30.0% | |
TTGTTCAATAACCATTGAGA+TGG | - | Chr5:19999498-19999517 | MsG0580025526.01.T01:CDS | 30.0% | |
! | AGATACTATTTCAAGTGCAT+TGG | - | Chr5:19998133-19998152 | MsG0580025526.01.T01:intron | 30.0% |
! | AGTTAATTCTACTCGGATTT+TGG | - | Chr5:19996600-19996619 | MsG0580025526.01.T01:CDS | 30.0% |
! | ATGGTGATTTGTCAGATATT+TGG | - | Chr5:19996539-19996558 | MsG0580025526.01.T01:CDS | 30.0% |
! | GAACTGGTTGTATGATTTTA+AGG | - | Chr5:19996672-19996691 | MsG0580025526.01.T01:CDS | 30.0% |
! | TAATATTAAAGGTGTGTCTG+GGG | + | Chr5:19997153-19997172 | None:intergenic | 30.0% |
!! | CTACATAGGTTTTGTCTTTT+TGG | - | Chr5:19997183-19997202 | MsG0580025526.01.T01:intron | 30.0% |
!! | GAAGATTTTGACCTTTAGAT+TGG | - | Chr5:19997480-19997499 | MsG0580025526.01.T01:CDS | 30.0% |
!! | TTTTAGAAGACATATGCAAG+AGG | - | Chr5:19997823-19997842 | MsG0580025526.01.T01:intron | 30.0% |
!!! | AGACTGCATTTGTTTTTATC+AGG | + | Chr5:19999348-19999367 | None:intergenic | 30.0% |
!!! | CTTTTTTCTCTTGTTTTCTG+GGG | + | Chr5:19999707-19999726 | None:intergenic | 30.0% |
!!! | GTCTTTTTTCTCTTGTTTTC+TGG | + | Chr5:19999709-19999728 | None:intergenic | 30.0% |
!!! | TTTCCTCAAGATTTTTTCCT+AGG | - | Chr5:19998694-19998713 | MsG0580025526.01.T01:intron | 30.0% |
AAAACGCTTACAATCGTCAA+TGG | + | Chr5:19996742-19996761 | None:intergenic | 35.0% | |
AAAGAAATACCCAATTGAGC+AGG | + | Chr5:19996391-19996410 | None:intergenic | 35.0% | |
AAATGGAATGCAGCAATTGA+AGG | + | Chr5:19998257-19998276 | None:intergenic | 35.0% | |
AAATTATCCACGAATACCAC+AGG | + | Chr5:19997595-19997614 | None:intergenic | 35.0% | |
AATTATCCACGAATACCACA+GGG | + | Chr5:19997594-19997613 | None:intergenic | 35.0% | |
ACCTGAAATTCCCAATCTAA+AGG | + | Chr5:19997494-19997513 | None:intergenic | 35.0% | |
ACCTTTAGATTGGGAATTTC+AGG | - | Chr5:19997490-19997509 | MsG0580025526.01.T01:CDS | 35.0% | |
AGTGGTAAAAGATCATCATC+AGG | - | Chr5:19999583-19999602 | MsG0580025526.01.T01:five_prime_UTR | 35.0% | |
AGTTTCAAGCTATGAAGACT+GGG | + | Chr5:19998722-19998741 | None:intergenic | 35.0% | |
ATAATTCACAGGTAGCACTT+GGG | + | Chr5:19999268-19999287 | None:intergenic | 35.0% | |
ATTCAGATCAATTGTGTGTC+GGG | + | Chr5:19996899-19996918 | None:intergenic | 35.0% | |
ATTGTGAAGAAAGTCTTTGG+AGG | - | Chr5:19997917-19997936 | MsG0580025526.01.T01:CDS | 35.0% | |
CACCAAACACACATTTAATC+TGG | - | Chr5:19997058-19997077 | MsG0580025526.01.T01:intron | 35.0% | |
CTGAATTGTATGTGCTACAT+AGG | - | Chr5:19996913-19996932 | MsG0580025526.01.T01:CDS | 35.0% | |
GACGTTTATGTTGATGTTGT+CGG | - | Chr5:19996433-19996452 | MsG0580025526.01.T01:CDS | 35.0% | |
GCAAAAGTTGGATGATTCAA+TGG | - | Chr5:19998563-19998582 | MsG0580025526.01.T01:CDS | 35.0% | |
TAGTTTCAAGCTATGAAGAC+TGG | + | Chr5:19998723-19998742 | None:intergenic | 35.0% | |
TATGCAGTTGTTGTGCATAA+TGG | - | Chr5:19998483-19998502 | MsG0580025526.01.T01:CDS | 35.0% | |
TCTAGACTTAGGTCAATCAA+TGG | + | Chr5:19998101-19998120 | None:intergenic | 35.0% | |
TGCTCAATTGGGTATTTCTT+TGG | - | Chr5:19996390-19996409 | MsG0580025526.01.T01:intron | 35.0% | |
TTGCTGCATTCCATTTAAAG+AGG | - | Chr5:19998261-19998280 | MsG0580025526.01.T01:CDS | 35.0% | |
TTTATGTCTGTGATGTACAC+CGG | - | Chr5:19996496-19996515 | MsG0580025526.01.T01:CDS | 35.0% | |
! | AAAGACTGATTCATCCAAGT+CGG | - | Chr5:19999723-19999742 | MsG0580025526.01.T01:five_prime_UTR | 35.0% |
! | AGGTAACTAAGGTATCTGAA+GGG | - | Chr5:19998878-19998897 | MsG0580025526.01.T01:intron | 35.0% |
! | AGTGATGTCTAAAACAGACT+TGG | + | Chr5:19999022-19999041 | None:intergenic | 35.0% |
! | GTGATGTCTAAAACAGACTT+GGG | + | Chr5:19999021-19999040 | None:intergenic | 35.0% |
! | TGACGATCTTTTGTTCAACA+GGG | - | Chr5:19997220-19997239 | MsG0580025526.01.T01:intron | 35.0% |
! | TGATTTGTCAGATATTTGGC+CGG | - | Chr5:19996543-19996562 | MsG0580025526.01.T01:CDS | 35.0% |
! | TGGGAATTTCAGGTCATAAT+GGG | - | Chr5:19997500-19997519 | MsG0580025526.01.T01:CDS | 35.0% |
! | TTGACGATCTTTTGTTCAAC+AGG | - | Chr5:19997219-19997238 | MsG0580025526.01.T01:intron | 35.0% |
! | TTGGGAATTTCAGGTCATAA+TGG | - | Chr5:19997499-19997518 | MsG0580025526.01.T01:CDS | 35.0% |
!! | AAGAGGGATTTTGAAAGAAG+AGG | + | Chr5:19996121-19996140 | None:intergenic | 35.0% |
!! | AGAGGGATTTTGAAAGAAGA+GGG | + | Chr5:19996120-19996139 | None:intergenic | 35.0% |
!! | ATATTGTTTTATGCCCGACA+AGG | - | Chr5:19998925-19998944 | MsG0580025526.01.T01:intron | 35.0% |
!! | GTCTCCTTTTTGATTCAGAA+TGG | - | Chr5:19997990-19998009 | MsG0580025526.01.T01:CDS | 35.0% |
!! | TCTGTTTTAGACATCACTGA+TGG | - | Chr5:19999024-19999043 | MsG0580025526.01.T01:intron | 35.0% |
!!! | ACCTTGGTTTTCAAGTTTTG+CGG | - | Chr5:19998951-19998970 | MsG0580025526.01.T01:intron | 35.0% |
!!! | GACCCATTTTTTATGTTGAC+AGG | - | Chr5:19998440-19998459 | MsG0580025526.01.T01:intron | 35.0% |
AAACAGTCCTTGCAGTTTAC+TGG | - | Chr5:19997556-19997575 | MsG0580025526.01.T01:CDS | 40.0% | |
AAAGCATGTGTTACCAAGGT+TGG | + | Chr5:19997257-19997276 | None:intergenic | 40.0% | |
AACTCTTCCAGTAAACTGCA+AGG | + | Chr5:19997566-19997585 | None:intergenic | 40.0% | |
AATATTGAAAAGAGTGGGGC+TGG | - | Chr5:19999078-19999097 | MsG0580025526.01.T01:intron | 40.0% | |
AATGGAACTTCATCTGACTC+TGG | - | Chr5:19998501-19998520 | MsG0580025526.01.T01:CDS | 40.0% | |
ACCTGACAAATCCATCTCAA+TGG | + | Chr5:19999512-19999531 | None:intergenic | 40.0% | |
ACTCACCATCATTAGGAGAA+TGG | + | Chr5:19997345-19997364 | None:intergenic | 40.0% | |
AGGACTGTTTCATCTGATAG+CGG | + | Chr5:19997546-19997565 | None:intergenic | 40.0% | |
ATCATCATCAGGCAAGTCTT+CGG | - | Chr5:19999594-19999613 | MsG0580025526.01.T01:five_prime_UTR | 40.0% | |
ATCCTACTCAGATTCAAGCA+TGG | + | Chr5:19998988-19999007 | None:intergenic | 40.0% | |
ATCCTCAAAATAAAGCTGCC+AGG | - | Chr5:19999620-19999639 | MsG0580025526.01.T01:five_prime_UTR | 40.0% | |
ATGGAACTTCATCTGACTCT+GGG | - | Chr5:19998502-19998521 | MsG0580025526.01.T01:CDS | 40.0% | |
ATTATCCACGAATACCACAG+GGG | + | Chr5:19997593-19997612 | None:intergenic | 40.0% | |
ATTTGTCAGATATTTGGCCG+GGG | - | Chr5:19996545-19996564 | MsG0580025526.01.T01:CDS | 40.0% | |
CAAGCATATCAATTTCCCAC+TGG | - | Chr5:19998319-19998338 | MsG0580025526.01.T01:CDS | 40.0% | |
CACAGACATAAACTCATCGT+TGG | + | Chr5:19996488-19996507 | None:intergenic | 40.0% | |
CATAATTCACAGGTAGCACT+TGG | + | Chr5:19999269-19999288 | None:intergenic | 40.0% | |
CATATTCCTAACATATGCCC+TGG | + | Chr5:19999641-19999660 | None:intergenic | 40.0% | |
CATTTGAAGACAGAGAAGCA+AGG | - | Chr5:19999556-19999575 | MsG0580025526.01.T01:five_prime_UTR | 40.0% | |
CGAGTAGAATTAACTGGAAC+CGG | + | Chr5:19996595-19996614 | None:intergenic | 40.0% | |
CGGTTCCAGTTAATTCTACT+CGG | - | Chr5:19996593-19996612 | MsG0580025526.01.T01:CDS | 40.0% | |
CTAAATTGTCTGTGCTACAG+AGG | - | Chr5:19997002-19997021 | MsG0580025526.01.T01:intron | 40.0% | |
CTCTCTATTATCTTCTCTCG+TGG | + | Chr5:19996027-19996046 | None:intergenic | 40.0% | |
GATTTGTCAGATATTTGGCC+GGG | - | Chr5:19996544-19996563 | MsG0580025526.01.T01:CDS | 40.0% | |
GCATATGTTAGGAATATGCC+TGG | - | Chr5:19999643-19999662 | MsG0580025526.01.T01:five_prime_UTR | 40.0% | |
GCTCCTAGGAAAAAATCTTG+AGG | + | Chr5:19998700-19998719 | None:intergenic | 40.0% | |
TACAACCAGTTCTCATCATC+AGG | + | Chr5:19996664-19996683 | None:intergenic | 40.0% | |
TATCAATTTCCCACTGGAGT+TGG | - | Chr5:19998325-19998344 | MsG0580025526.01.T01:intron | 40.0% | |
TATGGAGAAGCAGCTTATGT+TGG | - | Chr5:19998223-19998242 | MsG0580025526.01.T01:CDS | 40.0% | |
TCCGCAAAACTTGAAAACCA+AGG | + | Chr5:19998955-19998974 | None:intergenic | 40.0% | |
TCCTCAAAATAAAGCTGCCA+GGG | - | Chr5:19999621-19999640 | MsG0580025526.01.T01:five_prime_UTR | 40.0% | |
TCCTCTTACTCACCATCATT+AGG | + | Chr5:19997352-19997371 | None:intergenic | 40.0% | |
TCTGATTCAAATTCACCACG+TGG | - | Chr5:19996295-19996314 | MsG0580025526.01.T01:intron | 40.0% | |
TGAGTTTATGCAGTGTGCAT+TGG | - | Chr5:19997853-19997872 | MsG0580025526.01.T01:intron | 40.0% | |
TGCATTGGAGTCTTTCACAA+TGG | - | Chr5:19998148-19998167 | MsG0580025526.01.T01:intron | 40.0% | |
TTAGGAATATGCCTGGTTCA+AGG | - | Chr5:19999650-19999669 | MsG0580025526.01.T01:five_prime_UTR | 40.0% | |
TTCCATGCTTGAATCTGAGT+AGG | - | Chr5:19998983-19999002 | MsG0580025526.01.T01:intron | 40.0% | |
! | ACCATTGAGATGGATTTGTC+AGG | - | Chr5:19999508-19999527 | MsG0580025526.01.T01:CDS | 40.0% |
! | CAGGTAACTAAGGTATCTGA+AGG | - | Chr5:19998877-19998896 | MsG0580025526.01.T01:intron | 40.0% |
! | TCATCATCAGGAGCATAATC+CGG | + | Chr5:19996652-19996671 | None:intergenic | 40.0% |
! | TCCTAATGATGGTGAGTAAG+AGG | - | Chr5:19997348-19997367 | MsG0580025526.01.T01:CDS | 40.0% |
! | TGAGAAAGCATGTGTTACCA+AGG | + | Chr5:19997261-19997280 | None:intergenic | 40.0% |
!! | CTGCAATGAAGAAGTGTCTA+TGG | - | Chr5:19998205-19998224 | MsG0580025526.01.T01:intron | 40.0% |
!! | GCATTTTTGGACTTACTTGG+TGG | - | Chr5:19999679-19999698 | MsG0580025526.01.T01:five_prime_UTR | 40.0% |
!! | GGTGCATTTTTGGACTTACT+TGG | - | Chr5:19999676-19999695 | MsG0580025526.01.T01:five_prime_UTR | 40.0% |
!! | TTCAAGGAGAGGTGCATTTT+TGG | - | Chr5:19999666-19999685 | MsG0580025526.01.T01:five_prime_UTR | 40.0% |
AAAACCAAGGTGTGCCTTGT+CGG | + | Chr5:19998942-19998961 | None:intergenic | 45.0% | |
AAAAGAAGACCCTCGACTAG+GGG | + | Chr5:19997316-19997335 | None:intergenic | 45.0% | |
AAATCACCATGATCTCGCTG+CGG | + | Chr5:19996529-19996548 | None:intergenic | 45.0% | |
AACCGTAGATCCTGCTCAAT+TGG | - | Chr5:19996378-19996397 | MsG0580025526.01.T01:intron | 45.0% | |
AATATGCCTGGTTCAAGGAG+AGG | - | Chr5:19999655-19999674 | MsG0580025526.01.T01:five_prime_UTR | 45.0% | |
AATCACCTGGAGTCTGAGAA+GGG | + | Chr5:19999431-19999450 | None:intergenic | 45.0% | |
ACAGAGAAGCAAGGAAGTAG+TGG | - | Chr5:19999565-19999584 | MsG0580025526.01.T01:five_prime_UTR | 45.0% | |
ACCCAATTGAGCAGGATCTA+CGG | + | Chr5:19996383-19996402 | None:intergenic | 45.0% | |
ACCGTAGATCCTGCTCAATT+GGG | - | Chr5:19996379-19996398 | MsG0580025526.01.T01:intron | 45.0% | |
AGCTGCCATTCTCCTAATGA+TGG | - | Chr5:19997337-19997356 | MsG0580025526.01.T01:CDS | 45.0% | |
AGTTTCTGAGCCTGAGGATA+TGG | - | Chr5:19996456-19996475 | MsG0580025526.01.T01:CDS | 45.0% | |
ATTGTCCACCGACACATGTT+AGG | - | Chr5:19997035-19997054 | MsG0580025526.01.T01:intron | 45.0% | |
CAAAAGAAGACCCTCGACTA+GGG | + | Chr5:19997317-19997336 | None:intergenic | 45.0% | |
GCATACACAGCAAGATCCAT+CGG | + | Chr5:19996571-19996590 | None:intergenic | 45.0% | |
GCTCATTAGTGTCAGAAGAG+TGG | + | Chr5:19998079-19998098 | None:intergenic | 45.0% | |
GTTGCAAATCCAACTCCAGT+GGG | + | Chr5:19998337-19998356 | None:intergenic | 45.0% | |
GTTTCTGAGCCTGAGGATAT+GGG | - | Chr5:19996457-19996476 | MsG0580025526.01.T01:CDS | 45.0% | |
TCAAAAGAAGACCCTCGACT+AGG | + | Chr5:19997318-19997337 | None:intergenic | 45.0% | |
TCAAATGATCGCGTGAGATC+TGG | + | Chr5:19999543-19999562 | None:intergenic | 45.0% | |
TCCAGACACATGGCAAAAGT+TGG | - | Chr5:19998551-19998570 | MsG0580025526.01.T01:CDS | 45.0% | |
TGTTGTTCTTGTTCACCACG+TGG | + | Chr5:19996313-19996332 | None:intergenic | 45.0% | |
TTGGTTAAGCCCATATCCTC+AGG | + | Chr5:19996469-19996488 | None:intergenic | 45.0% | |
TTTAGACATCACTGATGGCC+AGG | - | Chr5:19999029-19999048 | MsG0580025526.01.T01:intron | 45.0% | |
! | ATGCTCCTGATGATGAGAAC+TGG | - | Chr5:19996656-19996675 | MsG0580025526.01.T01:CDS | 45.0% |
! | CTTTTGTTCAACAGGGAGCT+GGG | - | Chr5:19997227-19997246 | MsG0580025526.01.T01:intron | 45.0% |
! | GAAAGTCTTTGGAGGCAGTT+TGG | - | Chr5:19997925-19997944 | MsG0580025526.01.T01:CDS | 45.0% |
! | TCCAACTTTTGCCATGTGTC+TGG | + | Chr5:19998555-19998574 | None:intergenic | 45.0% |
! | TCTTTTGTTCAACAGGGAGC+TGG | - | Chr5:19997226-19997245 | MsG0580025526.01.T01:intron | 45.0% |
!! | GTTTGGTGCCTAACATGTGT+CGG | + | Chr5:19997046-19997065 | None:intergenic | 45.0% |
AAACCAAGGTGTGCCTTGTC+GGG | + | Chr5:19998941-19998960 | None:intergenic | 50.0% | |
AAATCAGGCCATGCTTCCGT+CGG | - | Chr5:19999772-19999791 | MsG0580025526.01.T01:five_prime_UTR | 50.0% | |
AAGCTGCCAGGGCATATGTT+AGG | - | Chr5:19999632-19999651 | MsG0580025526.01.T01:five_prime_UTR | 50.0% | |
AATGCACCTCTCCTTGAACC+AGG | + | Chr5:19999664-19999683 | None:intergenic | 50.0% | |
AGCAGTGCTCGCAAGAAATC+AGG | - | Chr5:19999757-19999776 | MsG0580025526.01.T01:five_prime_UTR | 50.0% | |
ATCACCTGGAGTCTGAGAAG+GGG | + | Chr5:19999430-19999449 | None:intergenic | 50.0% | |
CAATCACCTGGAGTCTGAGA+AGG | + | Chr5:19999432-19999451 | None:intergenic | 50.0% | |
GGTTGCAAATCCAACTCCAG+TGG | + | Chr5:19998338-19998357 | None:intergenic | 50.0% | |
TATCTCCCCTGTGGTATTCG+TGG | - | Chr5:19997585-19997604 | MsG0580025526.01.T01:CDS | 50.0% | |
TCAGCATATGAACTCCCACC+AGG | + | Chr5:19999315-19999334 | None:intergenic | 50.0% | |
TGGAAGAGTTATCTCCCCTG+TGG | - | Chr5:19997576-19997595 | MsG0580025526.01.T01:CDS | 50.0% | |
TGGAGGCAGTTTGGTTAGCA+AGG | - | Chr5:19997934-19997953 | MsG0580025526.01.T01:CDS | 50.0% | |
! | GGATCTTGCTGTGTATGCTC+CGG | - | Chr5:19996573-19996592 | MsG0580025526.01.T01:CDS | 50.0% |
! | TCATCAGGAGCATAATCCGG+TGG | + | Chr5:19996649-19996668 | None:intergenic | 50.0% |
! | TTCTGATTTGATGGCCCAGC+AGG | + | Chr5:19999210-19999229 | None:intergenic | 50.0% |
!! | CGGGTATTGACACGTGTAAG+TGG | + | Chr5:19996880-19996899 | None:intergenic | 50.0% |
!!! | GCCCTGGCAGCTTTATTTTG+AGG | + | Chr5:19999625-19999644 | None:intergenic | 50.0% |
ACTGGCATTGCAAAGCCTGG+TGG | - | Chr5:19999297-19999316 | MsG0580025526.01.T01:CDS | 55.0% | |
ATCTCGCTGCGGAACATCAC+CGG | + | Chr5:19996518-19996537 | None:intergenic | 55.0% | |
CAGGCTTTGCAATGCCAGTC+GGG | + | Chr5:19999296-19999315 | None:intergenic | 55.0% | |
CATACTGTGCCCCTAGTCGA+GGG | - | Chr5:19997304-19997323 | MsG0580025526.01.T01:CDS | 55.0% | |
CCAGGCTTTGCAATGCCAGT+CGG | + | Chr5:19999297-19999316 | None:intergenic | 55.0% | |
CTGGCATTGCAAAGCCTGGT+GGG | - | Chr5:19999298-19999317 | MsG0580025526.01.T01:CDS | 55.0% | |
GATGTTCCGCAGCGAGATCA+TGG | - | Chr5:19996520-19996539 | MsG0580025526.01.T01:CDS | 55.0% | |
GCCGCAAACAAGTTCCTGCT+GGG | - | Chr5:19999193-19999212 | MsG0580025526.01.T01:CDS | 55.0% | |
GCTATGAAGACTGGGCTCCT+AGG | + | Chr5:19998714-19998733 | None:intergenic | 55.0% | |
GCTGCTGTCTTTGTCCGACT+TGG | + | Chr5:19999740-19999759 | None:intergenic | 55.0% | |
GTGAAACTCCAGCTGCCACA+GGG | + | Chr5:19999804-19999823 | None:intergenic | 55.0% | |
GTGAATTATGCCAGCCCGAC+TGG | - | Chr5:19999279-19999298 | MsG0580025526.01.T01:CDS | 55.0% | |
TCACCTGGAGTCTGAGAAGG+GGG | + | Chr5:19999429-19999448 | None:intergenic | 55.0% | |
TCCGGTGGATACCAAGCTTC+CGG | + | Chr5:19996634-19996653 | None:intergenic | 55.0% | |
TGAAGGGACTGTGCTGTCTC+AGG | - | Chr5:19998894-19998913 | MsG0580025526.01.T01:intron | 55.0% | |
TGCCGCAAACAAGTTCCTGC+TGG | - | Chr5:19999192-19999211 | MsG0580025526.01.T01:CDS | 55.0% | |
TGGTGCCTAACATGTGTCGG+TGG | + | Chr5:19997043-19997062 | None:intergenic | 55.0% | |
TGTCGGAGTTTCTGAGCCTG+AGG | - | Chr5:19996450-19996469 | MsG0580025526.01.T01:CDS | 55.0% | |
TGTGAAACTCCAGCTGCCAC+AGG | + | Chr5:19999805-19999824 | None:intergenic | 55.0% | |
TTCGCACTGCTCCAGACACA+TGG | - | Chr5:19998541-19998560 | MsG0580025526.01.T01:CDS | 55.0% | |
! | GCAGGAACTTGTTTGCGGCA+AGG | + | Chr5:19999192-19999211 | None:intergenic | 55.0% |
! | GCCCAGCAGGAACTTGTTTG+CGG | + | Chr5:19999197-19999216 | None:intergenic | 55.0% |
!! | GTCGGGCTGGCATAATTCAC+AGG | + | Chr5:19999279-19999298 | None:intergenic | 55.0% |
ACAGCAAGATCCATCGGCCC+CGG | + | Chr5:19996565-19996584 | None:intergenic | 60.0% | |
ACCTGGAGTCTGAGAAGGGG+GGG | + | Chr5:19999427-19999446 | None:intergenic | 60.0% | |
AGATATTTGGCCGGGGCCGA+TGG | - | Chr5:19996552-19996571 | MsG0580025526.01.T01:CDS | 60.0% | |
AGTCTGAGAAGGGGGGGAGT+TGG | + | Chr5:19999421-19999440 | None:intergenic | 60.0% | |
ATGCCCGACAAGGCACACCT+TGG | - | Chr5:19998935-19998954 | MsG0580025526.01.T01:intron | 60.0% | |
CACCTGGAGTCTGAGAAGGG+GGG | + | Chr5:19999428-19999447 | None:intergenic | 60.0% | |
CCGACTGGCATTGCAAAGCC+TGG | - | Chr5:19999294-19999313 | MsG0580025526.01.T01:CDS | 60.0% | |
CTTTGCAATGCCAGTCGGGC+TGG | + | Chr5:19999292-19999311 | None:intergenic | 60.0% | |
GCATACTGTGCCCCTAGTCG+AGG | - | Chr5:19997303-19997322 | MsG0580025526.01.T01:CDS | 60.0% | |
GCCGGAAGCTTGGTATCCAC+CGG | - | Chr5:19996630-19996649 | MsG0580025526.01.T01:CDS | 60.0% | |
GGGGGAGTTGGGAGGAGTTA+AGG | + | Chr5:19999409-19999428 | None:intergenic | 60.0% | |
GGTGGATACCAAGCTTCCGG+CGG | + | Chr5:19996631-19996650 | None:intergenic | 60.0% | |
GTCTGAGAAGGGGGGGAGTT+GGG | + | Chr5:19999420-19999439 | None:intergenic | 60.0% | |
!!! | TCGGATTTTGGCTGTGCCGC+CGG | - | Chr5:19996612-19996631 | MsG0580025526.01.T01:CDS | 60.0% |
GGAGCTGGGCTTGCCAACCT+TGG | - | Chr5:19997241-19997260 | MsG0580025526.01.T01:intron | 65.0% | |
GGTAGCTGCCGACGGAAGCA+TGG | + | Chr5:19999783-19999802 | None:intergenic | 65.0% | |
TCCCCCCCTTCTCAGACTCC+AGG | - | Chr5:19999423-19999442 | MsG0580025526.01.T01:CDS | 65.0% | |
TGAGAAGGGGGGGAGTTGGG+AGG | + | Chr5:19999417-19999436 | None:intergenic | 65.0% | |
TGCCACAGGGTAGCTGCCGA+CGG | + | Chr5:19999791-19999810 | None:intergenic | 65.0% | |
TTCCGTCGGCAGCTACCCTG+TGG | - | Chr5:19999786-19999805 | MsG0580025526.01.T01:five_prime_UTR | 65.0% | |
GGCAGCTACCCTGTGGCAGC+TGG | - | Chr5:19999793-19999812 | MsG0580025526.01.T01:five_prime_UTR | 70.0% | |
TGGCTGTGCCGCCGGAAGCT+TGG | - | Chr5:19996620-19996639 | MsG0580025526.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 19996012 | 19999828 | 19996012 | ID=MsG0580025526.01;Name=MsG0580025526.01 |
Chr5 | mRNA | 19996012 | 19999828 | 19996012 | ID=MsG0580025526.01.T01;Parent=MsG0580025526.01;Name=MsG0580025526.01.T01;_AED=0.26;_eAED=0.26;_QI=280|0.85|0.62|1|1|1|8|0|721 |
Chr5 | exon | 19996012 | 19996310 | 19996012 | ID=MsG0580025526.01.T01:exon:8413;Parent=MsG0580025526.01.T01 |
Chr5 | exon | 19996396 | 19996960 | 19996396 | ID=MsG0580025526.01.T01:exon:8412;Parent=MsG0580025526.01.T01 |
Chr5 | exon | 19997256 | 19997378 | 19997256 | ID=MsG0580025526.01.T01:exon:8411;Parent=MsG0580025526.01.T01 |
Chr5 | exon | 19997455 | 19997784 | 19997455 | ID=MsG0580025526.01.T01:exon:8410;Parent=MsG0580025526.01.T01 |
Chr5 | exon | 19997885 | 19998030 | 19997885 | ID=MsG0580025526.01.T01:exon:8409;Parent=MsG0580025526.01.T01 |
Chr5 | exon | 19998221 | 19998342 | 19998221 | ID=MsG0580025526.01.T01:exon:8408;Parent=MsG0580025526.01.T01 |
Chr5 | exon | 19998478 | 19998599 | 19998478 | ID=MsG0580025526.01.T01:exon:8407;Parent=MsG0580025526.01.T01 |
Chr5 | exon | 19999090 | 19999828 | 19999090 | ID=MsG0580025526.01.T01:exon:8406;Parent=MsG0580025526.01.T01 |
Chr5 | five_prime_UTR | 19999549 | 19999828 | 19999549 | ID=MsG0580025526.01.T01:five_prime_utr;Parent=MsG0580025526.01.T01 |
Chr5 | CDS | 19999090 | 19999548 | 19999090 | ID=MsG0580025526.01.T01:cds;Parent=MsG0580025526.01.T01 |
Chr5 | CDS | 19998478 | 19998599 | 19998478 | ID=MsG0580025526.01.T01:cds;Parent=MsG0580025526.01.T01 |
Chr5 | CDS | 19998221 | 19998342 | 19998221 | ID=MsG0580025526.01.T01:cds;Parent=MsG0580025526.01.T01 |
Chr5 | CDS | 19997885 | 19998030 | 19997885 | ID=MsG0580025526.01.T01:cds;Parent=MsG0580025526.01.T01 |
Chr5 | CDS | 19997455 | 19997784 | 19997455 | ID=MsG0580025526.01.T01:cds;Parent=MsG0580025526.01.T01 |
Chr5 | CDS | 19997256 | 19997378 | 19997256 | ID=MsG0580025526.01.T01:cds;Parent=MsG0580025526.01.T01 |
Chr5 | CDS | 19996396 | 19996960 | 19996396 | ID=MsG0580025526.01.T01:cds;Parent=MsG0580025526.01.T01 |
Chr5 | CDS | 19996012 | 19996310 | 19996012 | ID=MsG0580025526.01.T01:cds;Parent=MsG0580025526.01.T01 |
Gene Sequence |
Protein sequence |