AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016092.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016092.01.T01 MTR_3g083250 88.357 1254 67 5 1 1175 1 1254 0.0 2210
MsG0380016092.01.T01 MTR_0191s0030 68.402 826 141 9 256 1019 41 808 0.0 1074
MsG0380016092.01.T01 MTR_0191s0030 41.294 201 84 6 68 265 1 170 2.65e-26 117
MsG0380016092.01.T01 MTR_6g033115 70.295 643 97 7 545 1139 4 600 0.0 877
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016092.01.T01 AT5G01630 50.330 908 387 16 319 1175 258 1152 0.0 859
MsG0380016092.01.T01 AT4G00020 49.229 908 393 16 319 1175 258 1148 0.0 844
MsG0380016092.01.T01 AT4G00020 49.490 883 380 15 319 1152 258 1123 0.0 827
MsG0380016092.01.T01 AT4G00020 47.598 916 392 19 319 1173 258 1146 0.0 793
MsG0380016092.01.T01 AT4G00020 48.999 849 363 16 319 1114 258 1089 0.0 774
MsG0380016092.01.T01 AT4G00020 49.054 740 314 14 319 1009 258 983 0.0 677

Find 285 sgRNAs with CRISPR-Local

Find 551 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTATTGATTTCCGATTAT+TGG 0.177850 3:-79059833 None:intergenic
AATATAACTCACATTTAATT+TGG 0.178578 3:-79059033 None:intergenic
GAGAAAGCTTTGAAAGATTC+TGG 0.189705 3:+79059148 MsG0380016092.01.T01:CDS
GGGAGGTCGTTATCTATTTC+TGG 0.198566 3:+79054589 MsG0380016092.01.T01:CDS
GTTAGAGCAAAGACGTTATT+AGG 0.201204 3:+79053878 MsG0380016092.01.T01:CDS
CAATTATCCTCTGGTGCTTC+TGG 0.202376 3:+79055341 MsG0380016092.01.T01:CDS
CTGGCAGTTTGGAATTTAAT+TGG 0.207082 3:-79054565 None:intergenic
ATTGCCTCATTTGCAGCTTA+TGG 0.211304 3:+79054204 MsG0380016092.01.T01:CDS
ATTGCCTCATTTGCAGCTTA+TGG 0.211304 3:+79054426 MsG0380016092.01.T01:CDS
ACAACAGATTGGAACTTAAT+TGG 0.219435 3:-79054349 None:intergenic
AGTTTACTTCTTCACATAAA+TGG 0.223688 3:+79056873 MsG0380016092.01.T01:CDS
GATTTCCGATTATTGGAAAA+TGG 0.239451 3:-79059826 None:intergenic
GCTTCTTGGTGATCCTGATT+TGG 0.254490 3:+79054636 MsG0380016092.01.T01:CDS
CTTCTTGGTGATCCTGATTT+GGG 0.261549 3:+79054637 MsG0380016092.01.T01:CDS
TGCCTCCCTGCTCTGATTCC+CGG 0.270037 3:-79056408 None:intergenic
TCAAGACGAACCTCGTTTAC+AGG 0.275730 3:+79053970 MsG0380016092.01.T01:CDS
AACTCACCTGCTTCTGTGTT+GGG 0.289823 3:-79059276 None:intergenic
GATTTGGGAGATTTCTTTGA+TGG 0.299751 3:+79054652 MsG0380016092.01.T01:CDS
CATATCTGCCATTAGGAATT+CGG 0.300492 3:-79058973 None:intergenic
TGTAAAGAATGGGATATATT+CGG 0.302175 3:-79057110 None:intergenic
TGACAATGGAACATCTAAAA+TGG 0.304206 3:-79056560 None:intergenic
ACTACACGCAACCTCATAAA+TGG 0.309834 3:-79059193 None:intergenic
TCCTTTGCATTAGAAGATAA+TGG 0.317935 3:-79059676 None:intergenic
CAGGCTGCTTATTATTTGTA+TGG 0.322115 3:-79055107 None:intergenic
AGGACCATACAAACCATATA+TGG 0.322671 3:+79060441 MsG0380016092.01.T01:CDS
GGTTCGCATATTTATGATTA+CGG 0.330430 3:+79058900 MsG0380016092.01.T01:CDS
AATGCAATAGATGATAGTTT+TGG 0.331468 3:+79053791 MsG0380016092.01.T01:CDS
ATCATTACAAATGGATTGTA+TGG 0.332897 3:+79056044 MsG0380016092.01.T01:CDS
TTACCTTTCTTTGTAAAGAA+TGG 0.343658 3:-79057121 None:intergenic
TTAAAAGTTAACAGGTCTTA+AGG 0.344117 3:+79060820 MsG0380016092.01.T01:three_prime_UTR
TGATACCTTGAGGTTGAAAA+AGG 0.344369 3:-79053661 None:intergenic
GGAATCAAATTTCAAATAAT+AGG 0.344969 3:-79060489 None:intergenic
CCGTAGATCCGGCAAGGTTA+TGG 0.348151 3:-79060191 None:intergenic
TTCTTGTTATACAAGGGTTT+CGG 0.353305 3:-79054964 None:intergenic
GCAGGTTTATGCGGCTGGAA+TGG 0.353377 3:+79056727 MsG0380016092.01.T01:CDS
AAAACCTCAAGGGGTGAAAC+TGG 0.358217 3:-79056751 None:intergenic
TGTCACCTGTCTGGCTGTAT+TGG 0.358302 3:-79055576 None:intergenic
TCACGTAGTTAAAAGTTAAC+AGG 0.359307 3:+79060812 MsG0380016092.01.T01:three_prime_UTR
ATCCCATTCTTTACAAAGAA+AGG 0.360000 3:+79057118 MsG0380016092.01.T01:CDS
TAGCATCAGCAACCCATATA+TGG 0.360952 3:-79060454 None:intergenic
GTCACCAGAGGTAGAGATAT+TGG 0.362686 3:-79055193 None:intergenic
AAAATTGTGCAACCAGATAT+TGG 0.364051 3:+79054073 MsG0380016092.01.T01:CDS
CCACTACGACTACCAATATC+TGG 0.367849 3:-79054085 None:intergenic
AAACGCGCTAGGAGGCTTCT+TGG 0.367921 3:+79054622 MsG0380016092.01.T01:CDS
TAAAGTTGCTGGTCCACCTT+TGG 0.369700 3:+79057029 MsG0380016092.01.T01:CDS
TACCTTTCTTTGTAAAGAAT+GGG 0.373115 3:-79057120 None:intergenic
TTGGATAGTGAAATGGATAT+CGG 0.378756 3:-79055385 None:intergenic
ACGACCTCCCACTGGCAGTT+TGG 0.385339 3:-79054576 None:intergenic
CAAATGGATTGTATGGAAAC+TGG 0.386415 3:+79056051 MsG0380016092.01.T01:CDS
CACTTCATTCTTGTTATACA+AGG 0.388000 3:-79054971 None:intergenic
CTGCTCTGATTCCCGGTTTG+TGG 0.390136 3:-79056401 None:intergenic
GTCACCTGTCTGGCTGTATT+GGG 0.390519 3:-79055575 None:intergenic
CGGTAATTGTTATCGGCGTC+GGG 0.391361 3:-79053518 None:intergenic
TTGCCACCGGTAATTGTTAT+CGG 0.392866 3:-79053525 None:intergenic
GGAGAAGCATATGCAATTGC+AGG 0.393974 3:+79059583 MsG0380016092.01.T01:CDS
ATGGACTGTCTTAACGGTAT+TGG 0.396758 3:-79055088 None:intergenic
ATTTGTATGGACTGTCTTAA+CGG 0.397845 3:-79055094 None:intergenic
TGTTGTAGATAATATTGTTT+CGG 0.407964 3:+79058857 MsG0380016092.01.T01:CDS
CATGGAAGGAAGGGGAGGGG+TGG 0.408337 3:-79053606 None:intergenic
CCTATCAACCATAACCTTGC+CGG 0.410329 3:+79060183 MsG0380016092.01.T01:CDS
CTTGTGCAGATCTGGGGAGC+AGG 0.412599 3:+79056709 MsG0380016092.01.T01:intron
GAATATTACTAACAACAGAT+TGG 0.415489 3:-79054360 None:intergenic
TCAAAGAAATCTCCCAAATC+AGG 0.416428 3:-79054649 None:intergenic
AAACTCACCTGCTTCTGTGT+TGG 0.416935 3:-79059277 None:intergenic
AATTCCTTGATGTGCATCCT+TGG 0.419461 3:-79055404 None:intergenic
TGTTTGTAGGACAGAAGCTT+CGG 0.420765 3:+79056605 MsG0380016092.01.T01:CDS
GTAAAGAATGGGATATATTC+GGG 0.420871 3:-79057109 None:intergenic
CCGGAGTCATATCTGCCATT+AGG 0.422638 3:-79058980 None:intergenic
ATGAATCATGATCAAACAAT+GGG 0.424139 3:-79060155 None:intergenic
CTCCGTGCTGTGTCAATAGA+TGG 0.427383 3:-79055670 None:intergenic
TTATACAAGGGTTTCGGTCC+AGG 0.427521 3:-79054958 None:intergenic
TGGTGATTGTAAAGCCTAGA+TGG 0.429640 3:+79060701 MsG0380016092.01.T01:exon
AATAATAAGCAGCCTGCTAG+TGG 0.430845 3:+79055114 MsG0380016092.01.T01:CDS
CAGGTTTATGCGGCTGGAAT+GGG 0.431824 3:+79056728 MsG0380016092.01.T01:CDS
GGGTCTTGAATCATTACAAA+TGG 0.432801 3:+79056035 MsG0380016092.01.T01:CDS
AGCTTCGCAACGAAGGTAAT+GGG 0.433487 3:+79054866 MsG0380016092.01.T01:CDS
CAACCCATATATGGTTTGTA+TGG 0.434022 3:-79060445 None:intergenic
TAATCGACAGGTAAAGTTGC+TGG 0.434418 3:+79057018 MsG0380016092.01.T01:intron
AAGAAGGCATAGTAACAATC+TGG 0.435277 3:+79059251 MsG0380016092.01.T01:CDS
TTGTCAAAGCAACTGGCTGC+TGG 0.435548 3:+79056577 MsG0380016092.01.T01:CDS
CGGTTTAGTACCTCAAACTT+TGG 0.436809 3:+79057077 MsG0380016092.01.T01:CDS
CCGACGCCGATAACAATTAC+CGG 0.438369 3:+79053519 MsG0380016092.01.T01:CDS
GCTTTGAAAGATTCTGGCCT+GGG 0.439971 3:+79059154 MsG0380016092.01.T01:CDS
ACCATTGGGCAGGGCATTGG+TGG 0.442677 3:+79055059 MsG0380016092.01.T01:CDS
CACAAACCGGGAATCAGAGC+AGG 0.445691 3:+79056402 MsG0380016092.01.T01:CDS
TGCTATCCAGCTAGGTGTGC+TGG 0.450035 3:+79056088 MsG0380016092.01.T01:CDS
GCATTATCTGAGCCACAAAC+CGG 0.451413 3:+79056389 MsG0380016092.01.T01:CDS
TGTTCCATTGTCAAAGCAAC+TGG 0.452238 3:+79056570 MsG0380016092.01.T01:CDS
AAAACCATTGGGCAGGGCAT+TGG 0.452394 3:+79055056 MsG0380016092.01.T01:CDS
AAGCTTCGCAACGAAGGTAA+TGG 0.453729 3:+79054865 MsG0380016092.01.T01:CDS
TGGAACATATAGAGCTCATT+GGG 0.454267 3:+79056893 MsG0380016092.01.T01:CDS
CTGCCAGCTCCGTCAGAAGA+TGG 0.455648 3:+79060537 MsG0380016092.01.T01:CDS
GGCAAATAGACAGTCACAAA+TGG 0.456805 3:+79059114 MsG0380016092.01.T01:intron
ATGGAACATATAGAGCTCAT+TGG 0.457747 3:+79056892 MsG0380016092.01.T01:CDS
ATTGCAGGACTCATACCATT+TGG 0.457860 3:+79059598 MsG0380016092.01.T01:CDS
TTAGTACCTCAAACTTTGGC+AGG 0.459938 3:+79057081 MsG0380016092.01.T01:CDS
GCTCTGATAAAATTTCAAAC+TGG 0.460753 3:+79054124 MsG0380016092.01.T01:CDS
GGGGTGGGAATAGAAGTAGG+AGG 0.461215 3:-79053590 None:intergenic
TTTGCAGCCTTCGAAACAAA+TGG 0.462337 3:+79054831 MsG0380016092.01.T01:CDS
TTTATGAGGTTGCGTGTAGT+TGG 0.466003 3:+79059196 MsG0380016092.01.T01:CDS
GAGTATCAGAAGGAAATAAC+TGG 0.466519 3:+79058879 MsG0380016092.01.T01:CDS
CAATGTAATTACCGTAGATC+CGG 0.466584 3:-79060202 None:intergenic
CATACCATTTGGCTCTGATT+CGG 0.466881 3:+79059609 MsG0380016092.01.T01:CDS
GTAATTCCTGCCAAAGTTTG+AGG 0.467704 3:-79057087 None:intergenic
GAGAAGTAACGCCATTTATG+AGG 0.467933 3:+79059182 MsG0380016092.01.T01:CDS
TTTAGTTGGTAGGTTGAACA+TGG 0.468541 3:+79054267 MsG0380016092.01.T01:CDS
CCGGCAAGGTTATGGTTGAT+AGG 0.468571 3:-79060183 None:intergenic
GGTGGGAATAGAAGTAGGAG+GGG 0.468575 3:-79053588 None:intergenic
ATGGAAGGAAGGGGAGGGGT+GGG 0.469291 3:-79053605 None:intergenic
GGGGAGCAGGTTTATGCGGC+TGG 0.469394 3:+79056722 MsG0380016092.01.T01:CDS
TGCATCCTTGGATAGTGAAA+TGG 0.470058 3:-79055392 None:intergenic
ATTGTTACTATGCCTTCTTT+AGG 0.470118 3:-79059247 None:intergenic
ATTACCTGATGTCACCTGTC+TGG 0.470613 3:-79055585 None:intergenic
GCTGCTGGAAGATTGTTTGT+AGG 0.471023 3:+79056592 MsG0380016092.01.T01:CDS
ATATCTGCCATTAGGAATTC+GGG 0.471026 3:-79058972 None:intergenic
GAAAAGGTGTTGGGTATAGT+TGG 0.472509 3:+79060681 MsG0380016092.01.T01:CDS
CTTGATAGTGGTAGTGTTAG+TGG 0.474341 3:+79054313 MsG0380016092.01.T01:CDS
GAGGATGGAGAGTAAAATGA+TGG 0.477162 3:+79057281 MsG0380016092.01.T01:CDS
ATTAAATTCCAAACTGCCAG+TGG 0.479529 3:+79054568 MsG0380016092.01.T01:CDS
CCGGTAATTGTTATCGGCGT+CGG 0.480036 3:-79053519 None:intergenic
AATAGAGAAACTCAAGGAAA+AGG 0.481279 3:+79060665 MsG0380016092.01.T01:CDS
TTAGTTGGTACGTTGAAGAA+TGG 0.482066 3:+79054490 MsG0380016092.01.T01:CDS
CGGAAATCAATACCATTGTC+AGG 0.483234 3:+79059841 MsG0380016092.01.T01:CDS
GTTTGTAGGACAGAAGCTTC+GGG 0.483618 3:+79056606 MsG0380016092.01.T01:CDS
AGCCCATCTTCTGACGGAGC+TGG 0.484532 3:-79060540 None:intergenic
GATTTGGCTCAATTATCCTC+TGG 0.484666 3:+79055332 MsG0380016092.01.T01:intron
CACGTGGAAAACCATTGGGC+AGG 0.486395 3:+79055049 MsG0380016092.01.T01:CDS
TCATTTCAAAGTCCTTTAGT+TGG 0.487907 3:+79054475 MsG0380016092.01.T01:CDS
TGCAGAACCCGAATTCCTAA+TGG 0.487970 3:+79058965 MsG0380016092.01.T01:CDS
AGCAGCCTGCTAGTGGGAAA+AGG 0.487997 3:+79055121 MsG0380016092.01.T01:CDS
AGCTTTGAAAGATTCTGGCC+TGG 0.488036 3:+79059153 MsG0380016092.01.T01:CDS
AAACTCAAGGAAAAGGTGTT+GGG 0.490315 3:+79060672 MsG0380016092.01.T01:CDS
GCTCATTGGGCAGATCGGTT+AGG 0.491199 3:+79056906 MsG0380016092.01.T01:CDS
AAAGTTACTATTTCTTCTAA+CGG 0.491582 3:+79053851 MsG0380016092.01.T01:CDS
ATCATGAATGGGTTACAGTC+AGG 0.496675 3:+79060093 MsG0380016092.01.T01:CDS
GCCATTATCTTCTAATGCAA+AGG 0.497976 3:+79059675 MsG0380016092.01.T01:CDS
CCATAACCTTGCCGGATCTA+CGG 0.498113 3:+79060191 MsG0380016092.01.T01:CDS
GGAGGGGTGGGAATAGAAGT+AGG 0.501265 3:-79053593 None:intergenic
CAATGGGGAGCAAAAGCAAA+TGG 0.502054 3:-79060139 None:intergenic
TTCTGAGGTGAGAACACTGT+GGG 0.503240 3:-79060511 None:intergenic
GAAAATTCCATTTGTTTCGA+AGG 0.503805 3:-79054838 None:intergenic
GGATTCACGTGGAAAACCAT+TGG 0.504425 3:+79055044 MsG0380016092.01.T01:CDS
GAAACTCAAGGAAAAGGTGT+TGG 0.504991 3:+79060671 MsG0380016092.01.T01:CDS
ATTTGTTGTGCATGTGGGAA+AGG 0.506609 3:+79060017 MsG0380016092.01.T01:CDS
GAATTTCTTACTTGGAAAGT+GGG 0.507846 3:-79059876 None:intergenic
TGCTTCTGGACTCAAAAGAA+AGG 0.512413 3:+79055355 MsG0380016092.01.T01:CDS
TTAAATTTCTTAGCATTCTG+AGG 0.512782 3:-79053938 None:intergenic
GGAATTTCTTACTTGGAAAG+TGG 0.513998 3:-79059877 None:intergenic
TTAAAAGTTGAATTAACTGA+TGG 0.514214 3:+79056431 MsG0380016092.01.T01:CDS
CTGGAACCCAACACAGAAGC+AGG 0.516002 3:+79059270 MsG0380016092.01.T01:CDS
TTCTCCCAATACAGCCAGAC+AGG 0.517074 3:+79055571 MsG0380016092.01.T01:CDS
TTGGGAGATTTCTTTGATGG+TGG 0.517505 3:+79054655 MsG0380016092.01.T01:CDS
ACAGCCAGACAGGTGACATC+AGG 0.518455 3:+79055581 MsG0380016092.01.T01:CDS
GCTAGTGGGAAAAGGAGAAT+AGG 0.518525 3:+79055129 MsG0380016092.01.T01:CDS
GGCTAAGATATATAAGATGC+TGG 0.518921 3:+79058935 MsG0380016092.01.T01:CDS
CAGGTGACATCAGGTAATGC+AGG 0.519570 3:+79055590 MsG0380016092.01.T01:CDS
ACTTTGAAACGACGCAGCAC+TGG 0.520218 3:-79054014 None:intergenic
ATGATTACGGCAACAGCGAA+GGG 0.520224 3:+79058913 MsG0380016092.01.T01:CDS
GGGTGGGAATAGAAGTAGGA+GGG 0.522833 3:-79053589 None:intergenic
GCAAAAGAACTAAGTTGCTC+CGG 0.523062 3:-79058999 None:intergenic
ATTTCCAATATCTCTACCTC+TGG 0.523225 3:+79055189 MsG0380016092.01.T01:CDS
CTATCCATAAGCTGCAAATG+AGG 0.526428 3:-79054208 None:intergenic
CTATCCATAAGCTGCAAATG+AGG 0.526428 3:-79054430 None:intergenic
TGGATAGTGAAATGGATATC+GGG 0.526457 3:-79055384 None:intergenic
GCAGCCAGTTGCTTTGACAA+TGG 0.526991 3:-79056574 None:intergenic
GTACATGGAAGGAAGGGGAG+GGG 0.527310 3:-79053609 None:intergenic
TTTATGCATTTGAAAGCCAA+AGG 0.530660 3:-79057045 None:intergenic
GATTCACGTGGAAAACCATT+GGG 0.530690 3:+79055045 MsG0380016092.01.T01:CDS
AACAGAGGAAGTGATTGTGC+TGG 0.533610 3:-79054713 None:intergenic
AAGTTGAATTAACTGATGGA+TGG 0.535731 3:+79056435 MsG0380016092.01.T01:CDS
TTCAAAGTCCTTTAGTTGGT+AGG 0.535790 3:+79054257 MsG0380016092.01.T01:CDS
TGGCTCTGATAGTAATGGTA+TGG 0.536135 3:+79055631 MsG0380016092.01.T01:CDS
GTGGGAATAGAAGTAGGAGG+GGG 0.536151 3:-79053587 None:intergenic
TTTGTTTCGAAGGCTGCAAA+GGG 0.537403 3:-79054828 None:intergenic
TGGGCCAGTTTCACCCCTTG+AGG 0.537797 3:+79056747 MsG0380016092.01.T01:CDS
ATCCTCTAGTTTGCAAGTGA+AGG 0.537800 3:-79059636 None:intergenic
CATTACTATCAGAGCCATCA+TGG 0.538675 3:-79055625 None:intergenic
CATGATGGCTCTGATAGTAA+TGG 0.539102 3:+79055626 MsG0380016092.01.T01:CDS
CTTGTATGGCGCTAGACGCT+CGG 0.539469 3:+79058833 MsG0380016092.01.T01:intron
CAAGTCAGCAAAAGAAGCAA+TGG 0.541240 3:+79060049 MsG0380016092.01.T01:CDS
ACTGATGGATCCATCATGAA+TGG 0.542358 3:+79060081 MsG0380016092.01.T01:CDS
TGATGGAGCTGCACAATCAA+AGG 0.543075 3:+79057298 MsG0380016092.01.T01:CDS
TATGATTACGGCAACAGCGA+AGG 0.543619 3:+79058912 MsG0380016092.01.T01:CDS
TGTTGCATTTGTTGTGCATG+TGG 0.544406 3:+79060011 MsG0380016092.01.T01:CDS
TCAAATAAGCTTCGCAACGA+AGG 0.544748 3:+79054859 MsG0380016092.01.T01:CDS
ATTTGTTTCGAAGGCTGCAA+AGG 0.544759 3:-79054829 None:intergenic
GGACCATACAAACCATATAT+GGG 0.545077 3:+79060442 MsG0380016092.01.T01:CDS
TTCTTCAACGTACCAACTAA+AGG 0.545451 3:-79054487 None:intergenic
TGTTGTAATATCAGAGAGGA+TGG 0.546484 3:+79057266 MsG0380016092.01.T01:CDS
TTAGCACCACCACCACTACC+TGG 0.547242 3:-79054535 None:intergenic
GTGCAACCAGGTAGTGGTGG+TGG 0.549195 3:+79054529 MsG0380016092.01.T01:CDS
AAATTTGTGCAACCAGGTAG+TGG 0.550143 3:+79054523 MsG0380016092.01.T01:CDS
AATGAATCATGATCAAACAA+TGG 0.551098 3:-79060156 None:intergenic
GAAGATCGTACATGGAAGGA+AGG 0.551575 3:-79053616 None:intergenic
ATGTTCAACCTACCAACTAA+AGG 0.553197 3:-79054265 None:intergenic
ATGGGCTAGCAATTCGAGCT+TGG 0.554921 3:+79060556 MsG0380016092.01.T01:CDS
AAGATCGTACATGGAAGGAA+GGG 0.555599 3:-79053615 None:intergenic
GTAGAGATATTGGAAATTCG+AGG 0.556021 3:-79055183 None:intergenic
TAACTACGTGAATGTTGTCA+TGG 0.557349 3:-79060800 None:intergenic
CAACGACATAAGCCTAAAGA+AGG 0.561695 3:+79059235 MsG0380016092.01.T01:CDS
TCGTTTCAAAGTCCTTTAGT+TGG 0.562899 3:+79054253 MsG0380016092.01.T01:CDS
AAAGTTGTACAACTTGATAG+TGG 0.562966 3:+79054301 MsG0380016092.01.T01:CDS
ATCTGGGGAGCAGGTTTATG+CGG 0.563462 3:+79056718 MsG0380016092.01.T01:CDS
TGGTAGTGTTAGTGGTGCTA+AGG 0.563632 3:+79054321 MsG0380016092.01.T01:CDS
GATATCCATTTCACTATCCA+AGG 0.565174 3:+79055387 MsG0380016092.01.T01:CDS
GCGTTACTTCTCTGTCTCCC+AGG 0.565373 3:-79059171 None:intergenic
CTGATGGATCCATCATGAAT+GGG 0.565485 3:+79060082 MsG0380016092.01.T01:CDS
TGCCAGCTCCGTCAGAAGAT+GGG 0.565816 3:+79060538 MsG0380016092.01.T01:CDS
CGTACATGGAAGGAAGGGGA+GGG 0.566520 3:-79053610 None:intergenic
TAAATGTAAATTTCATCGAA+AGG 0.567698 3:+79060891 MsG0380016092.01.T01:three_prime_UTR
TCCACCAATGCCCTGCCCAA+TGG 0.570333 3:-79055060 None:intergenic
GTTGCATTTGTTGTGCATGT+GGG 0.571683 3:+79060012 MsG0380016092.01.T01:CDS
CATAAAAGTAGCAAAGCTCC+TGG 0.572073 3:+79054940 MsG0380016092.01.T01:CDS
TGCTTGAGGAACTGAAGTAC+AGG 0.575597 3:+79056134 MsG0380016092.01.T01:CDS
CATTATCTGAGCCACAAACC+GGG 0.576494 3:+79056390 MsG0380016092.01.T01:CDS
TGACTGTAACCCATTCATGA+TGG 0.578512 3:-79060091 None:intergenic
AATTGTTATCGGCGTCGGGG+AGG 0.578824 3:-79053514 None:intergenic
CTTGTATAACAAGAATGAAG+TGG 0.581521 3:+79054972 MsG0380016092.01.T01:CDS
ATATTCCTTGTGCAGATCTG+GGG 0.583597 3:+79056703 MsG0380016092.01.T01:intron
AGAAGATAATGGCAACCACT+TGG 0.584421 3:-79059665 None:intergenic
ATTGGTAGTCGTAGTGGTGT+TGG 0.584800 3:+79054091 MsG0380016092.01.T01:CDS
TATTGTTTCGGAGTATCAGA+AGG 0.586541 3:+79058869 MsG0380016092.01.T01:CDS
AGATCGTACATGGAAGGAAG+GGG 0.587741 3:-79053614 None:intergenic
TCGTACATGGAAGGAAGGGG+AGG 0.589194 3:-79053611 None:intergenic
CTATCCAAGGATGCACATCA+AGG 0.589712 3:+79055400 MsG0380016092.01.T01:CDS
CCAGATATTGGTAGTCGTAG+TGG 0.590325 3:+79054085 MsG0380016092.01.T01:CDS
CGGAGCTGGCAGCATTTCTG+AGG 0.590348 3:-79060526 None:intergenic
GACTGTATCAAACGTGCTTG+AGG 0.593902 3:+79056120 MsG0380016092.01.T01:CDS
GTCCTTCACTTGCAAACTAG+AGG 0.594853 3:+79059634 MsG0380016092.01.T01:CDS
AATAGATAACGACCTCCCAC+TGG 0.595561 3:-79054584 None:intergenic
ATAATAAGCAGCCTGCTAGT+GGG 0.598295 3:+79055115 MsG0380016092.01.T01:CDS
GAGAGTAAATTTGTGCAACC+AGG 0.600163 3:+79054517 MsG0380016092.01.T01:CDS
CGTCGGAGTTGATTTGCCAC+CGG 0.600580 3:-79053538 None:intergenic
ATGAGAGATGCTATCCAGCT+AGG 0.600663 3:+79056080 MsG0380016092.01.T01:CDS
ACGTGGAAAACCATTGGGCA+GGG 0.603971 3:+79055050 MsG0380016092.01.T01:CDS
GTGTCATTTGATGTACCAGA+GGG 0.605432 3:-79054765 None:intergenic
GCCTAGATGGAGAAAAGAGG+AGG 0.605534 3:+79060714 MsG0380016092.01.T01:exon
TTAGTTGGTAGGTTGAACAT+GGG 0.606230 3:+79054268 MsG0380016092.01.T01:CDS
AGGAGAAGATCGTACATGGA+AGG 0.606968 3:-79053620 None:intergenic
ATAGAGCTCATTGGGCAGAT+CGG 0.606980 3:+79056901 MsG0380016092.01.T01:CDS
ACATCCGAATCAGAGCCAAA+TGG 0.607036 3:-79059613 None:intergenic
ATCCATCTATTGACACAGCA+CGG 0.609149 3:+79055668 MsG0380016092.01.T01:CDS
ATGCATTTGAAAGCCAAAGG+TGG 0.609685 3:-79057042 None:intergenic
GTGATGCGTTGAAACGCGCT+AGG 0.611592 3:+79054611 MsG0380016092.01.T01:CDS
CCTTATATTAGGTTAAGCAG+TGG 0.612044 3:+79057237 MsG0380016092.01.T01:intron
ACTTCATTCTTGTTATACAA+GGG 0.612276 3:-79054970 None:intergenic
ATGAAGGAGAAGATCGTACA+TGG 0.614402 3:-79053624 None:intergenic
GGCTCTGATAGTAATGGTAT+GGG 0.615727 3:+79055632 MsG0380016092.01.T01:CDS
GCAGATAATAGAGAAACTCA+AGG 0.622491 3:+79060659 MsG0380016092.01.T01:intron
AAAGCCTAGATGGAGAAAAG+AGG 0.623072 3:+79060711 MsG0380016092.01.T01:exon
TTTGAGTCCAGAAGCACCAG+AGG 0.625357 3:-79055348 None:intergenic
ATGCGTTGAAACGCGCTAGG+AGG 0.627260 3:+79054614 MsG0380016092.01.T01:CDS
GGTGTGAGGCGGAAGCATGA+AGG 0.627960 3:-79053640 None:intergenic
AATAACATTTGAAGTGTCGT+CGG 0.629896 3:-79053555 None:intergenic
GGAGCGTACATATTCCATGA+TGG 0.630123 3:+79055611 MsG0380016092.01.T01:CDS
CTATCTATTACCTGTAAACG+AGG 0.635769 3:-79053980 None:intergenic
ATTGCTAGCCCATCTTCTGA+CGG 0.636898 3:-79060546 None:intergenic
CCTAATGGCAGATATGACTC+CGG 0.636920 3:+79058980 MsG0380016092.01.T01:CDS
ATAGCGTCAGGAACTGTCAG+AGG 0.638897 3:+79059561 MsG0380016092.01.T01:intron
GCAAGGTTATGGTTGATAGG+TGG 0.641168 3:-79060180 None:intergenic
ACAAACCGGGAATCAGAGCA+GGG 0.642447 3:+79056403 MsG0380016092.01.T01:CDS
TAATTACCGTAGATCCGGCA+AGG 0.642794 3:-79060197 None:intergenic
TCTTCAAGAATGGATTCACG+TGG 0.644634 3:+79055033 MsG0380016092.01.T01:CDS
ACTCTCACTTCTTTCAACAG+AGG 0.651704 3:-79054728 None:intergenic
TTGAACATCTTGGTCACCAG+AGG 0.654410 3:-79055205 None:intergenic
TAGCGTCAGGAACTGTCAGA+GGG 0.654518 3:+79059562 MsG0380016092.01.T01:intron
AATTCCAAACTGCCAGTGGG+AGG 0.664894 3:+79054572 MsG0380016092.01.T01:CDS
TTAAATTCCAAACTGCCAGT+GGG 0.666155 3:+79054569 MsG0380016092.01.T01:CDS
TGATTACGGCAACAGCGAAG+GGG 0.678038 3:+79058914 MsG0380016092.01.T01:CDS
GTTGTGAATGAAAGTGATTG+TGG 0.680825 3:+79054916 MsG0380016092.01.T01:CDS
AGTGTCATTTGATGTACCAG+AGG 0.682145 3:-79054766 None:intergenic
GGTAATTGTTATCGGCGTCG+GGG 0.682486 3:-79053517 None:intergenic
ATGTCGCTCAGACCTGACAA+TGG 0.685855 3:-79059853 None:intergenic
CTAGAGGATCTACTACCAAG+TGG 0.692702 3:+79059650 MsG0380016092.01.T01:CDS
GGATTGCATGAAGAAACTGT+TGG 0.692759 3:+79053899 MsG0380016092.01.T01:CDS
TTTGTGCAACCAGGTAGTGG+TGG 0.698341 3:+79054526 MsG0380016092.01.T01:CDS
TAAAGGACTTTGAAATGACG+CGG 0.698771 3:-79054470 None:intergenic
GAATCGAAGAAATGTCAACA+TGG 0.699408 3:+79053486 None:intergenic
TTTCTGAGGTGAGAACACTG+TGG 0.717998 3:-79060512 None:intergenic
TGAATCATGATCAAACAATG+GGG 0.725399 3:-79060154 None:intergenic
ACGCCGATAACAATTACCGG+TGG 0.728353 3:+79053522 MsG0380016092.01.T01:CDS
AATCTGTTGTAATATCAGAG+AGG 0.730566 3:+79057262 MsG0380016092.01.T01:CDS
AACCGGGAATCAGAGCAGGG+AGG 0.760357 3:+79056406 MsG0380016092.01.T01:CDS
TCTGAGGTGAGAACACTGTG+GGG 0.762439 3:-79060510 None:intergenic
TGTCATTTGATGTACCAGAG+GGG 0.784049 3:-79054764 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAAAAATGAAATAATA+AGG - Chr3:79053701-79053720 None:intergenic 10.0%
!! AAATATAGAAGAAAAAAAAA+TGG - Chr3:79058381-79058400 None:intergenic 10.0%
!! AATTTATATGAGATAAAAAT+AGG + Chr3:79058505-79058524 MsG0380016092.01.T01:intron 10.0%
!! ATAATTATTCAATATTAATG+AGG - Chr3:79058537-79058556 None:intergenic 10.0%
!! TTGAATAATTATATAATTGA+TGG + Chr3:79058545-79058564 MsG0380016092.01.T01:intron 10.0%
!!! AATTATTTTAATTCTTCAAA+AGG - Chr3:79060860-79060879 None:intergenic 10.0%
!!! ATTTTTATCTCATATAAATT+CGG - Chr3:79058505-79058524 None:intergenic 10.0%
!!! TGAAGAATTAAAATAATTTT+TGG + Chr3:79060862-79060881 MsG0380016092.01.T01:three_prime_UTR 10.0%
!!! TTTGAAATTTATTTTTAGTT+TGG - Chr3:79058075-79058094 None:intergenic 10.0%
!! AATATAACTCACATTTAATT+TGG - Chr3:79059036-79059055 None:intergenic 15.0%
!! ACAAACAAAATTCATATTAA+CGG - Chr3:79058798-79058817 None:intergenic 15.0%
!! TAATCTTATAAAAAAAGAGA+AGG + Chr3:79060421-79060440 MsG0380016092.01.T01:CDS 15.0%
!! TGTGGTTAAATTTAATAATT+TGG + Chr3:79055900-79055919 MsG0380016092.01.T01:intron 15.0%
!!! AAAAGCCAATTAAATATTTT+AGG + Chr3:79056204-79056223 MsG0380016092.01.T01:intron 15.0%
!!! AAGAAAAAACATTTAAGATA+AGG - Chr3:79059452-79059471 None:intergenic 15.0%
!!! AATATCATTGTTAGTTTAAA+AGG - Chr3:79056230-79056249 None:intergenic 15.0%
!!! ATAAATTTTCAGCATTTTTA+TGG + Chr3:79059341-79059360 MsG0380016092.01.T01:intron 15.0%
!!! TTTTTATCTCATATAAATTC+GGG - Chr3:79058504-79058523 None:intergenic 15.0%
!! AAACATTTAAGAAAAGGAAT+TGG - Chr3:79059480-79059499 None:intergenic 20.0%
!! AAAGATAATTTCTATCTACT+TGG + Chr3:79059750-79059769 MsG0380016092.01.T01:intron 20.0%
!! AAAGGCCTAAAATATTTAAT+TGG - Chr3:79056212-79056231 None:intergenic 20.0%
!! ACTTAATAAGTCATTTAGTT+AGG + Chr3:79058243-79058262 MsG0380016092.01.T01:intron 20.0%
!! ATAAAAAGTTCTTCATTGAA+TGG + Chr3:79055006-79055025 MsG0380016092.01.T01:CDS 20.0%
!! ATATGAGATAAAAATAGGAA+AGG + Chr3:79058510-79058529 MsG0380016092.01.T01:intron 20.0%
!! ATTATTAAATTTAACCACAG+AGG - Chr3:79055899-79055918 None:intergenic 20.0%
!! CTATGATTTCAAAATATAAG+AGG + Chr3:79056488-79056507 MsG0380016092.01.T01:intron 20.0%
!! CTTAATAAGTCATTTAGTTA+GGG + Chr3:79058244-79058263 MsG0380016092.01.T01:intron 20.0%
!! GAAAAAAAAATGGTGTTTAT+TGG - Chr3:79058371-79058390 None:intergenic 20.0%
!! GGAATCAAATTTCAAATAAT+AGG - Chr3:79060492-79060511 None:intergenic 20.0%
!! GGTTAAATTTAATAATTTGG+CGG + Chr3:79055903-79055922 MsG0380016092.01.T01:intron 20.0%
!! GTATTAACATTAAAATAAGC+AGG - Chr3:79057804-79057823 None:intergenic 20.0%
!! TAAATGTAAATTTCATCGAA+AGG + Chr3:79060891-79060910 MsG0380016092.01.T01:three_prime_UTR 20.0%
!! TAGAAAAATATTGAACATCT+TGG - Chr3:79055218-79055237 None:intergenic 20.0%
!! TATCTGAATTAATGCAAAAT+AGG - Chr3:79060358-79060377 None:intergenic 20.0%
!! TGTGATAAACATTTAAGAAA+AGG - Chr3:79059486-79059505 None:intergenic 20.0%
!! TGTTGTAGATAATATTGTTT+CGG + Chr3:79058857-79058876 MsG0380016092.01.T01:CDS 20.0%
!! TTAAAAGTTGAATTAACTGA+TGG + Chr3:79056431-79056450 MsG0380016092.01.T01:CDS 20.0%
!! TTATAAATATTCCAGAAGAA+AGG + Chr3:79058026-79058045 MsG0380016092.01.T01:intron 20.0%
!! TTCAAATGCATAAAAAGAAA+TGG + Chr3:79057054-79057073 MsG0380016092.01.T01:CDS 20.0%
!!! AAAGTTACTATTTCTTCTAA+CGG + Chr3:79053851-79053870 MsG0380016092.01.T01:CDS 20.0%
!!! AAGTGTATTTATTTTTGTAG+AGG + Chr3:79053763-79053782 MsG0380016092.01.T01:intron 20.0%
!!! AGAACTATTTTCCTTATATT+AGG + Chr3:79057226-79057245 MsG0380016092.01.T01:intron 20.0%
!!! ATATAATTGATGGCTATATA+GGG + Chr3:79058555-79058574 MsG0380016092.01.T01:intron 20.0%
!!! GAAAATAGTTCTTAATTTTC+TGG - Chr3:79057218-79057237 None:intergenic 20.0%
!!! GATGTTCAATATTTTTCTAA+TGG + Chr3:79055219-79055238 MsG0380016092.01.T01:CDS 20.0%
!!! TACATTTCTTTCACTTTTAT+TGG + Chr3:79055266-79055285 MsG0380016092.01.T01:intron 20.0%
!!! TATATAATTGATGGCTATAT+AGG + Chr3:79058554-79058573 MsG0380016092.01.T01:intron 20.0%
!!! TCAAATTCTGCTATATTTTT+AGG + Chr3:79056836-79056855 MsG0380016092.01.T01:intron 20.0%
!!! TGATTCAATTATGTTGTTTT+AGG + Chr3:79060310-79060329 MsG0380016092.01.T01:intron 20.0%
!!! TGGTTTTGTATATTTATGAT+AGG + Chr3:79058187-79058206 MsG0380016092.01.T01:intron 20.0%
!!! TTGCTTAAACATCATATTTT+AGG + Chr3:79056164-79056183 MsG0380016092.01.T01:intron 20.0%
!!! TTTATTCTGAAAACCATTTT+TGG - Chr3:79054056-79054075 None:intergenic 20.0%
!!! TTTTTAATGTATATGATGCA+AGG + Chr3:79055792-79055811 MsG0380016092.01.T01:intron 20.0%
! AAAAGTTAAGATTGTTAAGC+TGG - Chr3:79058597-79058616 None:intergenic 25.0%
! AAAATTTGACCAAAGTCAAA+AGG + Chr3:79057977-79057996 MsG0380016092.01.T01:intron 25.0%
! AAATGCATAAAAAGAAATGG+CGG + Chr3:79057057-79057076 MsG0380016092.01.T01:CDS 25.0%
! AAATTTGACCAAAGTCAAAA+GGG + Chr3:79057978-79057997 MsG0380016092.01.T01:intron 25.0%
! AATATACAAAACCATCTGTA+AGG - Chr3:79058181-79058200 None:intergenic 25.0%
! AATATTCACATCAGACAAAA+AGG - Chr3:79057380-79057399 None:intergenic 25.0%
! AATGAATCATGATCAAACAA+TGG - Chr3:79060159-79060178 None:intergenic 25.0%
! AATTAGCTAACAATAAGAAC+AGG + Chr3:79057917-79057936 MsG0380016092.01.T01:intron 25.0%
! ACTTCTTATATTCATAAGCT+GGG + Chr3:79057323-79057342 MsG0380016092.01.T01:intron 25.0%
! AGACTATATTGCAAATTATC+TGG + Chr3:79057465-79057484 MsG0380016092.01.T01:intron 25.0%
! AGGATTATGATACTATTCAT+TGG + Chr3:79057870-79057889 MsG0380016092.01.T01:intron 25.0%
! AGTACTTGTTCATAGAAATA+AGG - Chr3:79057684-79057703 None:intergenic 25.0%
! AGTTTACTTCTTCACATAAA+TGG + Chr3:79056873-79056892 MsG0380016092.01.T01:CDS 25.0%
! ATGAATAGTATCATAATCCT+TGG - Chr3:79057870-79057889 None:intergenic 25.0%
! ATGAATCATGATCAAACAAT+GGG - Chr3:79060158-79060177 None:intergenic 25.0%
! ATTATGATTGAGTATTTGTG+TGG + Chr3:79056787-79056806 MsG0380016092.01.T01:intron 25.0%
! ATTGTCTATCTTACTTAGTA+CGG + Chr3:79056649-79056668 MsG0380016092.01.T01:intron 25.0%
! CAGAAACTATAAATAGGATT+TGG - Chr3:79058154-79058173 None:intergenic 25.0%
! GAATATTACTAACAACAGAT+TGG - Chr3:79054363-79054382 None:intergenic 25.0%
! GCTGTATAAGAATAATAACA+AGG - Chr3:79059980-79059999 None:intergenic 25.0%
! GGATTATGATACTATTCATT+GGG + Chr3:79057871-79057890 MsG0380016092.01.T01:intron 25.0%
! GTAAGATAGACAATAAAAAC+AGG - Chr3:79056643-79056662 None:intergenic 25.0%
! TACCTTTCTTTGTAAAGAAT+GGG - Chr3:79057123-79057142 None:intergenic 25.0%
! TATACGTAGAAAGATACTTA+TGG + Chr3:79059074-79059093 MsG0380016092.01.T01:intron 25.0%
! TATGTGTGATTCTTAAGATT+TGG + Chr3:79055316-79055335 MsG0380016092.01.T01:intron 25.0%
! TCAACATCATCATCTTTATA+AGG + Chr3:79057761-79057780 MsG0380016092.01.T01:intron 25.0%
! TCATCATCTTTATAAGGTAT+TGG + Chr3:79057767-79057786 MsG0380016092.01.T01:intron 25.0%
! TGAATCATGATCAATCAATA+GGG - Chr3:79060297-79060316 None:intergenic 25.0%
! TGTAAAGAATGGGATATATT+CGG - Chr3:79057113-79057132 None:intergenic 25.0%
! TTAAAAGTTAACAGGTCTTA+AGG + Chr3:79060820-79060839 MsG0380016092.01.T01:three_prime_UTR 25.0%
! TTAAATTTCTTAGCATTCTG+AGG - Chr3:79053941-79053960 None:intergenic 25.0%
! TTACCTTTCTTTGTAAAGAA+TGG - Chr3:79057124-79057143 None:intergenic 25.0%
! TTAGATTCTGCAGAAAATTA+TGG + Chr3:79057537-79057556 MsG0380016092.01.T01:intron 25.0%
! TTAGTTAGTAGATCCAAAAA+TGG + Chr3:79054040-79054059 MsG0380016092.01.T01:CDS 25.0%
! TTGAATCATGATCAATCAAT+AGG - Chr3:79060298-79060317 None:intergenic 25.0%
!! AAACATTTAAGATAAGGTAC+TGG - Chr3:79059446-79059465 None:intergenic 25.0%
!! AAACTTTTTGTCATGTGATT+GGG - Chr3:79054802-79054821 None:intergenic 25.0%
!! AATGCAATAGATGATAGTTT+TGG + Chr3:79053791-79053810 MsG0380016092.01.T01:CDS 25.0%
!! ACTTCATTCTTGTTATACAA+GGG - Chr3:79054973-79054992 None:intergenic 25.0%
!! CATCATCTTTATAAGGTATT+GGG + Chr3:79057768-79057787 MsG0380016092.01.T01:intron 25.0%
!! TATTTCTATGAACAAGTACT+TGG + Chr3:79057684-79057703 MsG0380016092.01.T01:intron 25.0%
!! TATTTTTCTAATGGTATGCA+TGG + Chr3:79055228-79055247 MsG0380016092.01.T01:intron 25.0%
!! TTTTTGGATCTACTAACTAA+AGG - Chr3:79054040-79054059 None:intergenic 25.0%
!!! ATCATTACAAATGGATTGTA+TGG + Chr3:79056044-79056063 MsG0380016092.01.T01:CDS 25.0%
!!! ATTGTTTTGTGAATGATAAG+AGG + Chr3:79055872-79055891 MsG0380016092.01.T01:intron 25.0%
!!! ATTTTGTTGTATTTCCTATC+AGG + Chr3:79058397-79058416 MsG0380016092.01.T01:intron 25.0%
!!! GTAAAAACCTGATCATTTTT+CGG - Chr3:79058749-79058768 None:intergenic 25.0%
!!! TAAAAACCTGATCATTTTTC+GGG - Chr3:79058748-79058767 None:intergenic 25.0%
AAAAAAACTAGCATTCTGAG+GGG - Chr3:79054167-79054186 None:intergenic 30.0%
AAAATTGTGCAACCAGATAT+TGG + Chr3:79054073-79054092 MsG0380016092.01.T01:CDS 30.0%
AAAGTTGTACAACTTGATAG+TGG + Chr3:79054301-79054320 MsG0380016092.01.T01:CDS 30.0%
AAGGAAAATACTTTATGTCC+AGG - Chr3:79056517-79056536 None:intergenic 30.0%
AAGTTGAATTAACTGATGGA+TGG + Chr3:79056435-79056454 MsG0380016092.01.T01:CDS 30.0%
AATAGAGAAACTCAAGGAAA+AGG + Chr3:79060665-79060684 MsG0380016092.01.T01:CDS 30.0%
AATCTGTTGTAATATCAGAG+AGG + Chr3:79057262-79057281 MsG0380016092.01.T01:CDS 30.0%
AATTTGACCAAAGTCAAAAG+GGG + Chr3:79057979-79057998 MsG0380016092.01.T01:intron 30.0%
ACAAAGATATGTAAGAACGA+TGG + Chr3:79057825-79057844 MsG0380016092.01.T01:intron 30.0%
ACAACAGATTGGAACTTAAT+TGG - Chr3:79054352-79054371 None:intergenic 30.0%
ACCATCAAGAAAATTCTTGA+GGG + Chr3:79056294-79056313 MsG0380016092.01.T01:intron 30.0%
AGAATCTAATACATTCTAGC+AGG - Chr3:79057526-79057545 None:intergenic 30.0%
AGGAAAATACTTTATGTCCA+GGG - Chr3:79056516-79056535 None:intergenic 30.0%
ATACATTCTAGCAGGTATAT+TGG - Chr3:79057518-79057537 None:intergenic 30.0%
ATCCCATTCTTTACAAAGAA+AGG + Chr3:79057118-79057137 MsG0380016092.01.T01:CDS 30.0%
ATTGTTACTATGCCTTCTTT+AGG - Chr3:79059250-79059269 None:intergenic 30.0%
CAAAAAAACTAGCATTCTGA+GGG - Chr3:79054168-79054187 None:intergenic 30.0%
CTGTGACTAATTGTACATAT+GGG + Chr3:79058718-79058737 MsG0380016092.01.T01:intron 30.0%
CTTGTATAACAAGAATGAAG+TGG + Chr3:79054972-79054991 MsG0380016092.01.T01:CDS 30.0%
GAAAATTCCATTTGTTTCGA+AGG - Chr3:79054841-79054860 None:intergenic 30.0%
GAATTTCTTACTTGGAAAGT+GGG - Chr3:79059879-79059898 None:intergenic 30.0%
GACTTCTTATATTCATAAGC+TGG + Chr3:79057322-79057341 MsG0380016092.01.T01:intron 30.0%
GATTTCCGATTATTGGAAAA+TGG - Chr3:79059829-79059848 None:intergenic 30.0%
GCTCTGATAAAATTTCAAAC+TGG + Chr3:79054124-79054143 MsG0380016092.01.T01:CDS 30.0%
GGATAGCAGAAACTATAAAT+AGG - Chr3:79058160-79058179 None:intergenic 30.0%
GGTTCGCATATTTATGATTA+CGG + Chr3:79058900-79058919 MsG0380016092.01.T01:CDS 30.0%
GTAAAGAATGGGATATATTC+GGG - Chr3:79057112-79057131 None:intergenic 30.0%
TACCATCAAGAAAATTCTTG+AGG + Chr3:79056293-79056312 MsG0380016092.01.T01:intron 30.0%
TACGGTAATTACATTGTTCT+AGG + Chr3:79060209-79060228 MsG0380016092.01.T01:intron 30.0%
TATAGAATACCTGCAGAAAA+AGG - Chr3:79056536-79056555 None:intergenic 30.0%
TATGAAAGAGAAGTGAATCA+TGG + Chr3:79056261-79056280 MsG0380016092.01.T01:intron 30.0%
TCAAAAAAACTAGCATTCTG+AGG - Chr3:79054169-79054188 None:intergenic 30.0%
TCACGTAGTTAAAAGTTAAC+AGG + Chr3:79060812-79060831 MsG0380016092.01.T01:three_prime_UTR 30.0%
TCATTTCAAAGTCCTTTAGT+TGG + Chr3:79054475-79054494 MsG0380016092.01.T01:CDS 30.0%
TCCTTTGCATTAGAAGATAA+TGG - Chr3:79059679-79059698 None:intergenic 30.0%
TGAATCATGATCAAACAATG+GGG - Chr3:79060157-79060176 None:intergenic 30.0%
TGACAATGGAACATCTAAAA+TGG - Chr3:79056563-79056582 None:intergenic 30.0%
TTAACTAGTTGATTACCTAC+AGG - Chr3:79058217-79058236 None:intergenic 30.0%
TTCACTTCTCTTTCATATCT+AGG - Chr3:79056258-79056277 None:intergenic 30.0%
TTCTGCAGAAAATTATGGTT+TGG + Chr3:79057542-79057561 MsG0380016092.01.T01:intron 30.0%
TTGGATAGTGAAATGGATAT+CGG - Chr3:79055388-79055407 None:intergenic 30.0%
TTTAATAATTTGGCGGAGTT+TGG + Chr3:79055910-79055929 MsG0380016092.01.T01:intron 30.0%
TTTATGCATTTGAAAGCCAA+AGG - Chr3:79057048-79057067 None:intergenic 30.0%
! AAGTATTTTCCTTTTTCTGC+AGG + Chr3:79056524-79056543 MsG0380016092.01.T01:intron 30.0%
! ATTTGTATGGACTGTCTTAA+CGG - Chr3:79055097-79055116 None:intergenic 30.0%
! CACTTCATTCTTGTTATACA+AGG - Chr3:79054974-79054993 None:intergenic 30.0%
! GAAACTTTTTGTCATGTGAT+TGG - Chr3:79054803-79054822 None:intergenic 30.0%
! GAATGGTTTTTCTTCAAGAA+TGG + Chr3:79055023-79055042 MsG0380016092.01.T01:CDS 30.0%
! GCAAGCAACAAAAAGTATAA+CGG - Chr3:79060260-79060279 None:intergenic 30.0%
! TGCTGCAACAAATTTCATTT+TGG - Chr3:79055551-79055570 None:intergenic 30.0%
! TTCTTGTTATACAAGGGTTT+CGG - Chr3:79054967-79054986 None:intergenic 30.0%
!! AAAAACCTGATCATTTTTCG+GGG - Chr3:79058747-79058766 None:intergenic 30.0%
!! AAGATAAGGTACTGGAAAAA+AGG - Chr3:79059438-79059457 None:intergenic 30.0%
!! AATAACATTTGAAGTGTCGT+CGG - Chr3:79053558-79053577 None:intergenic 30.0%
!! CTATCTACTTGGCTTTATTA+TGG + Chr3:79059761-79059780 MsG0380016092.01.T01:intron 30.0%
!! TAGTTCTTTTGCTGCTTATA+AGG + Chr3:79059010-79059029 MsG0380016092.01.T01:CDS 30.0%
!! TGGTATTGATTTCCGATTAT+TGG - Chr3:79059836-79059855 None:intergenic 30.0%
!!! AGAGAAGGTATTTTTGGTTT+TGG + Chr3:79058308-79058327 MsG0380016092.01.T01:intron 30.0%
!!! AGGTATTTTTGGTTTTGGAA+AGG + Chr3:79058313-79058332 MsG0380016092.01.T01:intron 30.0%
!!! CTTGTGTTTTTGTTTTATGC+AGG + Chr3:79060388-79060407 MsG0380016092.01.T01:intron 30.0%
!!! GGATGTCATTCTTTTTAAGT+TGG + Chr3:79056954-79056973 MsG0380016092.01.T01:intron 30.0%
!!! TGTAAGCATCTTTTAGTTTG+TGG + Chr3:79056933-79056952 MsG0380016092.01.T01:intron 30.0%
!!! TGTTTTTGTTTTATGCAGGT+TGG + Chr3:79060392-79060411 MsG0380016092.01.T01:intron 30.0%
!!! TTCTTTTGCCTAGTCTTAAT+TGG + Chr3:79055977-79055996 MsG0380016092.01.T01:intron 30.0%
!!! TTTGGTTTTGGAAAGGAAAT+TGG + Chr3:79058320-79058339 MsG0380016092.01.T01:intron 30.0%
AAACTACGCCAATTAAGACT+AGG - Chr3:79055988-79056007 None:intergenic 35.0%
AAATTACAGTCAGTACTGCT+CGG - Chr3:79055523-79055542 None:intergenic 35.0%
AAGCCACAAAAAAACCTCAA+GGG - Chr3:79056764-79056783 None:intergenic 35.0%
ACAAAGGAGAACAATAAGGT+GGG - Chr3:79059803-79059822 None:intergenic 35.0%
ACCTTATTGTTCTCCTTTGT+AGG + Chr3:79059803-79059822 MsG0380016092.01.T01:intron 35.0%
AGAAGAAAGGACGAAACAAA+AGG + Chr3:79058039-79058058 MsG0380016092.01.T01:intron 35.0%
AGCCATATCCAAATTTACAG+TGG - Chr3:79058642-79058661 None:intergenic 35.0%
AGCTCAAGAAAATAAGCTCA+GGG - Chr3:79056999-79057018 None:intergenic 35.0%
AGGACCATACAAACCATATA+TGG + Chr3:79060441-79060460 MsG0380016092.01.T01:CDS 35.0%
AGGTATCTAGCAATCAGAAT+AGG + Chr3:79059710-79059729 MsG0380016092.01.T01:intron 35.0%
ATATCTGCCATTAGGAATTC+GGG - Chr3:79058975-79058994 None:intergenic 35.0%
ATGGAACATATAGAGCTCAT+TGG + Chr3:79056892-79056911 MsG0380016092.01.T01:CDS 35.0%
ATGTAAGAACGATGGATGAT+TGG + Chr3:79057833-79057852 MsG0380016092.01.T01:intron 35.0%
ATGTGTTTCTTTGCTAGAGA+TGG - Chr3:79058112-79058131 None:intergenic 35.0%
ATGTTCAACCTACCAACTAA+AGG - Chr3:79054268-79054287 None:intergenic 35.0%
ATTAAATTCCAAACTGCCAG+TGG + Chr3:79054568-79054587 MsG0380016092.01.T01:CDS 35.0%
ATTTCCAATATCTCTACCTC+TGG + Chr3:79055189-79055208 MsG0380016092.01.T01:CDS 35.0%
ATTTGAGAAAACCATCCAAC+AGG - Chr3:79056822-79056841 None:intergenic 35.0%
CAAAGATACACACACACATA+AGG - Chr3:79059914-79059933 None:intergenic 35.0%
CAAGTGTATAGTAACTAGCT+AGG - Chr3:79059411-79059430 None:intergenic 35.0%
CAATGTAATTACCGTAGATC+CGG - Chr3:79060205-79060224 None:intergenic 35.0%
CAGGCTGCTTATTATTTGTA+TGG - Chr3:79055110-79055129 None:intergenic 35.0%
CATATCTGCCATTAGGAATT+CGG - Chr3:79058976-79058995 None:intergenic 35.0%
CCACTGCTTAACCTAATATA+AGG - Chr3:79057240-79057259 None:intergenic 35.0%
CCATATGTACAATTAGTCAC+AGG - Chr3:79058720-79058739 None:intergenic 35.0%
CCATCAAGAAAATTCTTGAG+GGG + Chr3:79056295-79056314 MsG0380016092.01.T01:intron 35.0%
CCTGTGACTAATTGTACATA+TGG + Chr3:79058717-79058736 MsG0380016092.01.T01:intron 35.0%
CCTTATATTAGGTTAAGCAG+TGG + Chr3:79057237-79057256 MsG0380016092.01.T01:intron 35.0%
CTATCTATTACCTGTAAACG+AGG - Chr3:79053983-79054002 None:intergenic 35.0%
GAGTATCAGAAGGAAATAAC+TGG + Chr3:79058879-79058898 MsG0380016092.01.T01:CDS 35.0%
GATATCCATTTCACTATCCA+AGG + Chr3:79055387-79055406 MsG0380016092.01.T01:CDS 35.0%
GATTTGGGAGATTTCTTTGA+TGG + Chr3:79054652-79054671 MsG0380016092.01.T01:CDS 35.0%
GCAGATAATAGAGAAACTCA+AGG + Chr3:79060659-79060678 MsG0380016092.01.T01:intron 35.0%
GCATAAGCAATCAATACTGA+GGG - Chr3:79057404-79057423 None:intergenic 35.0%
GCCATTATCTTCTAATGCAA+AGG + Chr3:79059675-79059694 MsG0380016092.01.T01:CDS 35.0%
GGAATTTCTTACTTGGAAAG+TGG - Chr3:79059880-79059899 None:intergenic 35.0%
GGACCATACAAACCATATAT+GGG + Chr3:79060442-79060461 MsG0380016092.01.T01:CDS 35.0%
GGCTAAGATATATAAGATGC+TGG + Chr3:79058935-79058954 MsG0380016092.01.T01:CDS 35.0%
GGGTCTTGAATCATTACAAA+TGG + Chr3:79056035-79056054 MsG0380016092.01.T01:CDS 35.0%
GGTTAGAATTTCAACTTGCA+CGG + Chr3:79056456-79056475 MsG0380016092.01.T01:intron 35.0%
GTAGAGATATTGGAAATTCG+AGG - Chr3:79055186-79055205 None:intergenic 35.0%
GTTAGAGCAAAGACGTTATT+AGG + Chr3:79053878-79053897 MsG0380016092.01.T01:CDS 35.0%
GTTGTGAATGAAAGTGATTG+TGG + Chr3:79054916-79054935 MsG0380016092.01.T01:CDS 35.0%
TAAAAATACTCATACCCCTC+TGG + Chr3:79054750-79054769 MsG0380016092.01.T01:CDS 35.0%
TAACTACGTGAATGTTGTCA+TGG - Chr3:79060803-79060822 None:intergenic 35.0%
TAAGCCACAAAAAAACCTCA+AGG - Chr3:79056765-79056784 None:intergenic 35.0%
TACAAAGGAGAACAATAAGG+TGG - Chr3:79059804-79059823 None:intergenic 35.0%
TAGCTCAAGAAAATAAGCTC+AGG - Chr3:79057000-79057019 None:intergenic 35.0%
TATTGGAAAATGGCCTACAA+AGG - Chr3:79059819-79059838 None:intergenic 35.0%
TCAAAATATAAGAGGTTCCC+TGG + Chr3:79056496-79056515 MsG0380016092.01.T01:intron 35.0%
TCAAAGAAATCTCCCAAATC+AGG - Chr3:79054652-79054671 None:intergenic 35.0%
TCAGACAAAAAGGTGATTGA+TGG - Chr3:79057370-79057389 None:intergenic 35.0%
TCGTTTCAAAGTCCTTTAGT+TGG + Chr3:79054025-79054044 MsG0380016092.01.T01:CDS 35.0%
TGAATGAGAATGATACCTTG+AGG - Chr3:79053674-79053693 None:intergenic 35.0%
TGATACCTTGAGGTTGAAAA+AGG - Chr3:79053664-79053683 None:intergenic 35.0%
TGCAAAGGAACAGTTTAAGT+AGG + Chr3:79059690-79059709 MsG0380016092.01.T01:intron 35.0%
TGGAACATATAGAGCTCATT+GGG + Chr3:79056893-79056912 MsG0380016092.01.T01:CDS 35.0%
TGGATAGTGAAATGGATATC+GGG - Chr3:79055387-79055406 None:intergenic 35.0%
TGTGTTTCTTTGCTAGAGAT+GGG - Chr3:79058111-79058130 None:intergenic 35.0%
TGTTGTAATATCAGAGAGGA+TGG + Chr3:79057266-79057285 MsG0380016092.01.T01:CDS 35.0%
TTAAATTCCAAACTGCCAGT+GGG + Chr3:79054569-79054588 MsG0380016092.01.T01:CDS 35.0%
TTCAAAGTCCTTTAGTTGGT+AGG + Chr3:79054257-79054276 MsG0380016092.01.T01:CDS 35.0%
TTCTTCAACGTACCAACTAA+AGG - Chr3:79054490-79054509 None:intergenic 35.0%
TTTATGATAGGTAGTCCTGT+AGG + Chr3:79058199-79058218 MsG0380016092.01.T01:intron 35.0%
TTTCCTTGCTTCTAGATACT+AGG - Chr3:79057572-79057591 None:intergenic 35.0%
! AAGAAGGCATAGTAACAATC+TGG + Chr3:79059251-79059270 MsG0380016092.01.T01:CDS 35.0%
! AAGTCTTGTGTTCAACAACT+TGG - Chr3:79058458-79058477 None:intergenic 35.0%
! AGATGCAACTTACTCTTTTG+AGG - Chr3:79055711-79055730 None:intergenic 35.0%
! ATTTTCTTGAGCTAATCGAC+AGG + Chr3:79057006-79057025 MsG0380016092.01.T01:intron 35.0%
! CAACCCATATATGGTTTGTA+TGG - Chr3:79060448-79060467 None:intergenic 35.0%
! CTGGCAGTTTGGAATTTAAT+TGG - Chr3:79054568-79054587 None:intergenic 35.0%
! GGAAATTCGAGGCTTTTTAA+AGG - Chr3:79055175-79055194 None:intergenic 35.0%
! GTATCAAAACTTGAGTTGCA+TGG + Chr3:79060600-79060619 MsG0380016092.01.T01:intron 35.0%
! TATTCATTGGGAAAAGCATG+AGG + Chr3:79057883-79057902 MsG0380016092.01.T01:intron 35.0%
! TATTGTTTCGGAGTATCAGA+AGG + Chr3:79058869-79058888 MsG0380016092.01.T01:CDS 35.0%
! TTAGTTGGTACGTTGAAGAA+TGG + Chr3:79054490-79054509 MsG0380016092.01.T01:CDS 35.0%
!! AAACTCAAGGAAAAGGTGTT+GGG + Chr3:79060672-79060691 MsG0380016092.01.T01:CDS 35.0%
!! ACTCAAGTTTTGATACAGCA+TGG - Chr3:79060596-79060615 None:intergenic 35.0%
!! CAAATGGATTGTATGGAAAC+TGG + Chr3:79056051-79056070 MsG0380016092.01.T01:CDS 35.0%
!! CAATGGATTTTTGTGACTGA+TGG + Chr3:79060066-79060085 MsG0380016092.01.T01:CDS 35.0%
!! CAATTTTTCAGCATTCTGAG+GGG - Chr3:79054389-79054408 None:intergenic 35.0%
!! GAATTTTCTTGATGGTAGAC+CGG - Chr3:79056290-79056309 None:intergenic 35.0%
!! GAGAAAGCTTTGAAAGATTC+TGG + Chr3:79059148-79059167 MsG0380016092.01.T01:CDS 35.0%
!! GCAATTTTTCAGCATTCTGA+GGG - Chr3:79054390-79054409 None:intergenic 35.0%
!! GCAGAAAATTATGGTTTGGT+AGG + Chr3:79057546-79057565 MsG0380016092.01.T01:intron 35.0%
!! GTAGGCCATTTTCCAATAAT+CGG + Chr3:79059821-79059840 MsG0380016092.01.T01:intron 35.0%
!! TAAAGGACTTTGAAATGACG+CGG - Chr3:79054473-79054492 None:intergenic 35.0%
!! TGCAATTTTTCAGCATTCTG+AGG - Chr3:79054391-79054410 None:intergenic 35.0%
!! TGTTATGATTTGATAGCGTC+AGG + Chr3:79059549-79059568 MsG0380016092.01.T01:intron 35.0%
!! TTAGTTGGTAGGTTGAACAT+GGG + Chr3:79054268-79054287 MsG0380016092.01.T01:CDS 35.0%
!! TTTAGTTGGTAGGTTGAACA+TGG + Chr3:79054267-79054286 MsG0380016092.01.T01:CDS 35.0%
!! TTTATAAGGTATTGGGTCGT+TGG + Chr3:79057775-79057794 MsG0380016092.01.T01:intron 35.0%
!! TTTTGTTTCGTCCTTTCTTC+TGG - Chr3:79058040-79058059 None:intergenic 35.0%
!!! GAGATCAGAGAAGGTATTTT+TGG + Chr3:79058302-79058321 MsG0380016092.01.T01:intron 35.0%
!!! TTGAGGTTTTTTTGTGGCTT+AGG + Chr3:79056764-79056783 MsG0380016092.01.T01:intron 35.0%
AAAACTTCGAGCAACCTGAT+AGG - Chr3:79058414-79058433 None:intergenic 40.0%
AAAGCCTAGATGGAGAAAAG+AGG + Chr3:79060711-79060730 MsG0380016092.01.T01:exon 40.0%
AAATTTGTGCAACCAGGTAG+TGG + Chr3:79054523-79054542 MsG0380016092.01.T01:CDS 40.0%
AAGATCGTACATGGAAGGAA+GGG - Chr3:79053618-79053637 None:intergenic 40.0%
AATAATAAGCAGCCTGCTAG+TGG + Chr3:79055114-79055133 MsG0380016092.01.T01:CDS 40.0%
AATTCCTTGATGTGCATCCT+TGG - Chr3:79055407-79055426 None:intergenic 40.0%
AATTGCACATCTCTCTAGGT+GGG + Chr3:79056015-79056034 MsG0380016092.01.T01:intron 40.0%
ACACACACACATAAGGACTA+GGG - Chr3:79059907-79059926 None:intergenic 40.0%
ACTACACGCAACCTCATAAA+TGG - Chr3:79059196-79059215 None:intergenic 40.0%
ACTCTCACTTCTTTCAACAG+AGG - Chr3:79054731-79054750 None:intergenic 40.0%
ACTGTCTATTTGCCTGAAGA+TGG - Chr3:79059108-79059127 None:intergenic 40.0%
AGCCACAAAAAAACCTCAAG+GGG - Chr3:79056763-79056782 None:intergenic 40.0%
AGCTATTCCTTCGTAGTTAC+TGG - Chr3:79055760-79055779 None:intergenic 40.0%
AGTATCTCCAGTAACTACGA+AGG + Chr3:79055750-79055769 MsG0380016092.01.T01:intron 40.0%
ATAATAAGCAGCCTGCTAGT+GGG + Chr3:79055115-79055134 MsG0380016092.01.T01:CDS 40.0%
ATAGAAATAAGGCCCTACAC+CGG - Chr3:79057673-79057692 None:intergenic 40.0%
ATATTCCTTGTGCAGATCTG+GGG + Chr3:79056703-79056722 MsG0380016092.01.T01:intron 40.0%
ATCCATCTATTGACACAGCA+CGG + Chr3:79055668-79055687 MsG0380016092.01.T01:CDS 40.0%
ATGAAGGAGAAGATCGTACA+TGG - Chr3:79053627-79053646 None:intergenic 40.0%
ATGCATTTGAAAGCCAAAGG+TGG - Chr3:79057045-79057064 None:intergenic 40.0%
ATGGTTTCACATCCATCTTC+AGG + Chr3:79059093-79059112 MsG0380016092.01.T01:intron 40.0%
ATTGCAGGACTCATACCATT+TGG + Chr3:79059598-79059617 MsG0380016092.01.T01:CDS 40.0%
ATTGCCTCATTTGCAGCTTA+TGG + Chr3:79054204-79054223 MsG0380016092.01.T01:CDS 40.0%
ATTTGTTTCGAAGGCTGCAA+AGG - Chr3:79054832-79054851 None:intergenic 40.0%
CAACGACATAAGCCTAAAGA+AGG + Chr3:79059235-79059254 MsG0380016092.01.T01:CDS 40.0%
CAACTCTTCGAAAAAGCAAC+CGG + Chr3:79057651-79057670 MsG0380016092.01.T01:intron 40.0%
CAAGAAAATTCTTGAGGGGA+TGG + Chr3:79056299-79056318 MsG0380016092.01.T01:intron 40.0%
CAAGTCAGCAAAAGAAGCAA+TGG + Chr3:79060049-79060068 MsG0380016092.01.T01:CDS 40.0%
CAATAGGGAGCAAAAGCAAA+TGG - Chr3:79060282-79060301 None:intergenic 40.0%
CAGAGAGTCATCATTGAAGA+AGG - Chr3:79056329-79056348 None:intergenic 40.0%
CATAAAAGTAGCAAAGCTCC+TGG + Chr3:79054940-79054959 MsG0380016092.01.T01:CDS 40.0%
CATATTCCTTGTGCAGATCT+GGG + Chr3:79056702-79056721 MsG0380016092.01.T01:intron 40.0%
CATTACTATCAGAGCCATCA+TGG - Chr3:79055628-79055647 None:intergenic 40.0%
CGCATAAGCAATCAATACTG+AGG - Chr3:79057405-79057424 None:intergenic 40.0%
CGCCACTGTAAATTTGGATA+TGG + Chr3:79058637-79058656 MsG0380016092.01.T01:intron 40.0%
CGGAAATCAATACCATTGTC+AGG + Chr3:79059841-79059860 MsG0380016092.01.T01:CDS 40.0%
CGGTTTAGTACCTCAAACTT+TGG + Chr3:79057077-79057096 MsG0380016092.01.T01:CDS 40.0%
CTATCCATAAGCTGCAAATG+AGG - Chr3:79054211-79054230 None:intergenic 40.0%
CTTCAATTGCACATCTCTCT+AGG + Chr3:79056011-79056030 MsG0380016092.01.T01:intron 40.0%
GAGAAGTAACGCCATTTATG+AGG + Chr3:79059182-79059201 MsG0380016092.01.T01:CDS 40.0%
GAGAGTAAATTTGTGCAACC+AGG + Chr3:79054517-79054536 MsG0380016092.01.T01:CDS 40.0%
GAGGATGGAGAGTAAAATGA+TGG + Chr3:79057281-79057300 MsG0380016092.01.T01:CDS 40.0%
GATTCACGTGGAAAACCATT+GGG + Chr3:79055045-79055064 MsG0380016092.01.T01:CDS 40.0%
GCAAAAGAACTAAGTTGCTC+CGG - Chr3:79059002-79059021 None:intergenic 40.0%
GCCTACAAAGGAGAACAATA+AGG - Chr3:79059807-79059826 None:intergenic 40.0%
GGATTGCATGAAGAAACTGT+TGG + Chr3:79053899-79053918 MsG0380016092.01.T01:CDS 40.0%
GGCAAATAGACAGTCACAAA+TGG + Chr3:79059114-79059133 MsG0380016092.01.T01:intron 40.0%
GTAATTCCTGCCAAAGTTTG+AGG - Chr3:79057090-79057109 None:intergenic 40.0%
GTTCTTTACTGTCTTGTCCT+GGG + Chr3:79055484-79055503 MsG0380016092.01.T01:intron 40.0%
GTTTCTGCTATCCTTACAGA+TGG + Chr3:79058167-79058186 MsG0380016092.01.T01:intron 40.0%
TAATCGACAGGTAAAGTTGC+TGG + Chr3:79057018-79057037 MsG0380016092.01.T01:intron 40.0%
TACACACACACATAAGGACT+AGG - Chr3:79059908-79059927 None:intergenic 40.0%
TAGCATCAGCAACCCATATA+TGG - Chr3:79060457-79060476 None:intergenic 40.0%
TCAAATAAGCTTCGCAACGA+AGG + Chr3:79054859-79054878 MsG0380016092.01.T01:CDS 40.0%
TCATATTCCTTGTGCAGATC+TGG + Chr3:79056701-79056720 MsG0380016092.01.T01:intron 40.0%
TCCTCCATTAGAGCAAAAAG+TGG + Chr3:79055436-79055455 MsG0380016092.01.T01:CDS 40.0%
TCTGCACAAGGAATATGAGA+AGG - Chr3:79056699-79056718 None:intergenic 40.0%
TGACTGTAACCCATTCATGA+TGG - Chr3:79060094-79060113 None:intergenic 40.0%
TGCATCCTTGGATAGTGAAA+TGG - Chr3:79055395-79055414 None:intergenic 40.0%
TGCTTCTGGACTCAAAAGAA+AGG + Chr3:79055355-79055374 MsG0380016092.01.T01:CDS 40.0%
TGGTGATTGTAAAGCCTAGA+TGG + Chr3:79060701-79060720 MsG0380016092.01.T01:exon 40.0%
TGTTCCATTGTCAAAGCAAC+TGG + Chr3:79056570-79056589 MsG0380016092.01.T01:CDS 40.0%
TGTTCTTTACTGTCTTGTCC+TGG + Chr3:79055483-79055502 MsG0380016092.01.T01:intron 40.0%
TGTTTGTAGGACAGAAGCTT+CGG + Chr3:79056605-79056624 MsG0380016092.01.T01:CDS 40.0%
TTAGTACCTCAAACTTTGGC+AGG + Chr3:79057081-79057100 MsG0380016092.01.T01:CDS 40.0%
TTCGTAGTTACTGGAGATAC+TGG - Chr3:79055751-79055770 None:intergenic 40.0%
TTCTGTCGCCACTGTAAATT+TGG + Chr3:79058631-79058650 MsG0380016092.01.T01:intron 40.0%
TTGCCACCGGTAATTGTTAT+CGG - Chr3:79053528-79053547 None:intergenic 40.0%
TTGGGAGATTTCTTTGATGG+TGG + Chr3:79054655-79054674 MsG0380016092.01.T01:CDS 40.0%
TTTAGTTAGGGCATGTGAGA+TGG + Chr3:79058256-79058275 MsG0380016092.01.T01:intron 40.0%
TTTATGAGGTTGCGTGTAGT+TGG + Chr3:79059196-79059215 MsG0380016092.01.T01:CDS 40.0%
TTTGCAGCCTTCGAAACAAA+TGG + Chr3:79054831-79054850 MsG0380016092.01.T01:CDS 40.0%
TTTGTTTCGAAGGCTGCAAA+GGG - Chr3:79054831-79054850 None:intergenic 40.0%
! ACTGATGGATCCATCATGAA+TGG + Chr3:79060081-79060100 MsG0380016092.01.T01:CDS 40.0%
! AGAAGATAATGGCAACCACT+TGG - Chr3:79059668-79059687 None:intergenic 40.0%
! ATCCTCTAGTTTGCAAGTGA+AGG - Chr3:79059639-79059658 None:intergenic 40.0%
! ATGGACTGTCTTAACGGTAT+TGG - Chr3:79055091-79055110 None:intergenic 40.0%
! CCCCTCAAGAATTTTCTTGA+TGG - Chr3:79056298-79056317 None:intergenic 40.0%
! CCTTCTCTGATCTCTCTTTT+CGG - Chr3:79058296-79058315 None:intergenic 40.0%
! CTGATGGATCCATCATGAAT+GGG + Chr3:79060082-79060101 MsG0380016092.01.T01:CDS 40.0%
! CTTCTTGGTGATCCTGATTT+GGG + Chr3:79054637-79054656 MsG0380016092.01.T01:CDS 40.0%
! GAAACTCAAGGAAAAGGTGT+TGG + Chr3:79060671-79060690 MsG0380016092.01.T01:CDS 40.0%
! GATTTGGCTCAATTATCCTC+TGG + Chr3:79055332-79055351 MsG0380016092.01.T01:intron 40.0%
! GGCTCTGATAGTAATGGTAT+GGG + Chr3:79055632-79055651 MsG0380016092.01.T01:CDS 40.0%
! TCTTCAAGAATGGATTCACG+TGG + Chr3:79055033-79055052 MsG0380016092.01.T01:CDS 40.0%
! TGTCATTTGATGTACCAGAG+GGG - Chr3:79054767-79054786 None:intergenic 40.0%
! TTGAGGTTGAAAAAGGTGTG+AGG - Chr3:79053657-79053676 None:intergenic 40.0%
!! AGATTCGCTTTTCTCGTTTC+TGG + Chr3:79054678-79054697 MsG0380016092.01.T01:CDS 40.0%
!! AGTGTCATTTGATGTACCAG+AGG - Chr3:79054769-79054788 None:intergenic 40.0%
!! ATCATGAATGGGTTACAGTC+AGG + Chr3:79060093-79060112 MsG0380016092.01.T01:CDS 40.0%
!! ATTTGTTGTGCATGTGGGAA+AGG + Chr3:79060017-79060036 MsG0380016092.01.T01:CDS 40.0%
!! CATACCATTTGGCTCTGATT+CGG + Chr3:79059609-79059628 MsG0380016092.01.T01:CDS 40.0%
!! CATGATGGCTCTGATAGTAA+TGG + Chr3:79055626-79055645 MsG0380016092.01.T01:CDS 40.0%
!! CTTGATAGTGGTAGTGTTAG+TGG + Chr3:79054313-79054332 MsG0380016092.01.T01:CDS 40.0%
!! CTTTTCTCGTTTCTGGATCA+GGG + Chr3:79054685-79054704 MsG0380016092.01.T01:CDS 40.0%
!! GAAAAGGTGTTGGGTATAGT+TGG + Chr3:79060681-79060700 MsG0380016092.01.T01:CDS 40.0%
!! GTGTCATTTGATGTACCAGA+GGG - Chr3:79054768-79054787 None:intergenic 40.0%
!! GTTGCATTTGTTGTGCATGT+GGG + Chr3:79060012-79060031 MsG0380016092.01.T01:CDS 40.0%
!! TATGGCTTGCTGCATAATGA+AGG + Chr3:79058655-79058674 MsG0380016092.01.T01:intron 40.0%
!! TGGCTCTGATAGTAATGGTA+TGG + Chr3:79055631-79055650 MsG0380016092.01.T01:CDS 40.0%
!! TGTTGCATTTGTTGTGCATG+TGG + Chr3:79060011-79060030 MsG0380016092.01.T01:CDS 40.0%
!!! ACCACTTTTTGCTCTAATGG+AGG - Chr3:79055440-79055459 None:intergenic 40.0%
!!! CAGGAGCTTTGCTACTTTTA+TGG - Chr3:79054942-79054961 None:intergenic 40.0%
!!! CTGACCACTTTTTGCTCTAA+TGG - Chr3:79055443-79055462 None:intergenic 40.0%
!!! TCACACCTTTTTCAACCTCA+AGG + Chr3:79053656-79053675 MsG0380016092.01.T01:CDS 40.0%
AAAACCTCAAGGGGTGAAAC+TGG - Chr3:79056754-79056773 None:intergenic 45.0%
AAACTCACCTGCTTCTGTGT+TGG - Chr3:79059280-79059299 None:intergenic 45.0%
AACAGAGGAAGTGATTGTGC+TGG - Chr3:79054716-79054735 None:intergenic 45.0%
AACTCACCTGCTTCTGTGTT+GGG - Chr3:79059279-79059298 None:intergenic 45.0%
AAGCTTCGCAACGAAGGTAA+TGG + Chr3:79054865-79054884 MsG0380016092.01.T01:CDS 45.0%
AATAGATAACGACCTCCCAC+TGG - Chr3:79054587-79054606 None:intergenic 45.0%
ACACACACATAAGGACTAGG+GGG - Chr3:79059905-79059924 None:intergenic 45.0%
ACATCCGAATCAGAGCCAAA+TGG - Chr3:79059616-79059635 None:intergenic 45.0%
AGATCGTACATGGAAGGAAG+GGG - Chr3:79053617-79053636 None:intergenic 45.0%
AGATTGTTAAGCTGGTCCCA+AGG - Chr3:79058589-79058608 None:intergenic 45.0%
AGCTTCGCAACGAAGGTAAT+GGG + Chr3:79054866-79054885 MsG0380016092.01.T01:CDS 45.0%
AGGAGAAGATCGTACATGGA+AGG - Chr3:79053623-79053642 None:intergenic 45.0%
AGGCCTAGTATCTAGAAGCA+AGG + Chr3:79057566-79057585 MsG0380016092.01.T01:intron 45.0%
ATAGAGCTCATTGGGCAGAT+CGG + Chr3:79056901-79056920 MsG0380016092.01.T01:CDS 45.0%
ATGAGAGATGCTATCCAGCT+AGG + Chr3:79056080-79056099 MsG0380016092.01.T01:CDS 45.0%
ATGATTACGGCAACAGCGAA+GGG + Chr3:79058913-79058932 MsG0380016092.01.T01:CDS 45.0%
ATTACCTGATGTCACCTGTC+TGG - Chr3:79055588-79055607 None:intergenic 45.0%
ATTGCTAGCCCATCTTCTGA+CGG - Chr3:79060549-79060568 None:intergenic 45.0%
ATTTGGCGGAGTTTGGTACT+TGG + Chr3:79055917-79055936 MsG0380016092.01.T01:intron 45.0%
CAATGGGGAGCAAAAGCAAA+TGG - Chr3:79060142-79060161 None:intergenic 45.0%
CAATTATCCTCTGGTGCTTC+TGG + Chr3:79055341-79055360 MsG0380016092.01.T01:CDS 45.0%
CAATTGCACATCTCTCTAGG+TGG + Chr3:79056014-79056033 MsG0380016092.01.T01:intron 45.0%
CACACACACATAAGGACTAG+GGG - Chr3:79059906-79059925 None:intergenic 45.0%
CATTATCTGAGCCACAAACC+GGG + Chr3:79056390-79056409 MsG0380016092.01.T01:CDS 45.0%
CCACTACGACTACCAATATC+TGG - Chr3:79054088-79054107 None:intergenic 45.0%
CCGAAAAGAGAGATCAGAGA+AGG + Chr3:79058293-79058312 MsG0380016092.01.T01:intron 45.0%
CCTAATGGCAGATATGACTC+CGG + Chr3:79058980-79058999 MsG0380016092.01.T01:CDS 45.0%
CCTATCAACCATAACCTTGC+CGG + Chr3:79060183-79060202 MsG0380016092.01.T01:CDS 45.0%
CTAGAGGATCTACTACCAAG+TGG + Chr3:79059650-79059669 MsG0380016092.01.T01:CDS 45.0%
CTATCCAAGGATGCACATCA+AGG + Chr3:79055400-79055419 MsG0380016092.01.T01:CDS 45.0%
CTGATCATGTGCTTGACAGT+GGG + Chr3:79056366-79056385 MsG0380016092.01.T01:intron 45.0%
CTGTGACTGATCACCTTGTA+TGG + Chr3:79058819-79058838 MsG0380016092.01.T01:intron 45.0%
GAAGATCGTACATGGAAGGA+AGG - Chr3:79053619-79053638 None:intergenic 45.0%
GAATGATAAGAGGTCCTCTG+TGG + Chr3:79055882-79055901 MsG0380016092.01.T01:intron 45.0%
GACTGTATCAAACGTGCTTG+AGG + Chr3:79056120-79056139 MsG0380016092.01.T01:CDS 45.0%
GATGCAAGGACATGTCAGTT+AGG + Chr3:79055806-79055825 MsG0380016092.01.T01:intron 45.0%
GATTGGTATGACAACTGCCA+AGG + Chr3:79057850-79057869 MsG0380016092.01.T01:intron 45.0%
GCATTATCTGAGCCACAAAC+CGG + Chr3:79056389-79056408 MsG0380016092.01.T01:CDS 45.0%
GCTAGTGGGAAAAGGAGAAT+AGG + Chr3:79055129-79055148 MsG0380016092.01.T01:CDS 45.0%
GCTGCTGGAAGATTGTTTGT+AGG + Chr3:79056592-79056611 MsG0380016092.01.T01:CDS 45.0%
GGAAACCCCGAAAAATGATC+AGG + Chr3:79058739-79058758 MsG0380016092.01.T01:intron 45.0%
GGAGCGTACATATTCCATGA+TGG + Chr3:79055611-79055630 MsG0380016092.01.T01:CDS 45.0%
GGATGTGTATTCCTGTTGGA+TGG + Chr3:79056808-79056827 MsG0380016092.01.T01:intron 45.0%
GGATTCACGTGGAAAACCAT+TGG + Chr3:79055044-79055063 MsG0380016092.01.T01:CDS 45.0%
GGGAGGTCGTTATCTATTTC+TGG + Chr3:79054589-79054608 MsG0380016092.01.T01:CDS 45.0%
GTCACCAGAGGTAGAGATAT+TGG - Chr3:79055196-79055215 None:intergenic 45.0%
GTCCTTCACTTGCAAACTAG+AGG + Chr3:79059634-79059653 MsG0380016092.01.T01:CDS 45.0%
GTGTGGATGTGTATTCCTGT+TGG + Chr3:79056804-79056823 MsG0380016092.01.T01:intron 45.0%
GTGTGTGTGTATCTTTGTGC+TGG + Chr3:79059917-79059936 MsG0380016092.01.T01:intron 45.0%
GTTTCTTTGCTAGAGATGGG+AGG - Chr3:79058108-79058127 None:intergenic 45.0%
GTTTGTAGGACAGAAGCTTC+GGG + Chr3:79056606-79056625 MsG0380016092.01.T01:CDS 45.0%
TAAAGTTGCTGGTCCACCTT+TGG + Chr3:79057029-79057048 MsG0380016092.01.T01:CDS 45.0%
TAATTACCGTAGATCCGGCA+AGG - Chr3:79060200-79060219 None:intergenic 45.0%
TATGATTACGGCAACAGCGA+AGG + Chr3:79058912-79058931 MsG0380016092.01.T01:CDS 45.0%
TCAAGACGAACCTCGTTTAC+AGG + Chr3:79053970-79053989 MsG0380016092.01.T01:CDS 45.0%
TCGAAAAAGCAACCGGTGTA+GGG + Chr3:79057658-79057677 MsG0380016092.01.T01:intron 45.0%
TCTGATCATGTGCTTGACAG+TGG + Chr3:79056365-79056384 MsG0380016092.01.T01:intron 45.0%
TGATCATGTGCTTGACAGTG+GGG + Chr3:79056367-79056386 MsG0380016092.01.T01:intron 45.0%
TGATGGAGCTGCACAATCAA+AGG + Chr3:79057298-79057317 MsG0380016092.01.T01:CDS 45.0%
TGCAGAACCCGAATTCCTAA+TGG + Chr3:79058965-79058984 MsG0380016092.01.T01:CDS 45.0%
TGCTTGAGGAACTGAAGTAC+AGG + Chr3:79056134-79056153 MsG0380016092.01.T01:CDS 45.0%
TTATACAAGGGTTTCGGTCC+AGG - Chr3:79054961-79054980 None:intergenic 45.0%
TTCGAAAAAGCAACCGGTGT+AGG + Chr3:79057657-79057676 MsG0380016092.01.T01:intron 45.0%
TTCGAGCTTGGTATGCATCA+TGG + Chr3:79060568-79060587 MsG0380016092.01.T01:intron 45.0%
TTGAACATCTTGGTCACCAG+AGG - Chr3:79055208-79055227 None:intergenic 45.0%
TTGCTAGAGATGGGAGGAAA+TGG - Chr3:79058102-79058121 None:intergenic 45.0%
! AATTTTCCAGCACACCTAGC+TGG - Chr3:79056097-79056116 None:intergenic 45.0%
! AGGTTGAAAAAGGTGTGAGG+CGG - Chr3:79053654-79053673 None:intergenic 45.0%
! AGGTTTTTACAGTGCGTGTG+TGG + Chr3:79058759-79058778 MsG0380016092.01.T01:intron 45.0%
! ATTCTCCTTTTCCCACTAGC+AGG - Chr3:79055129-79055148 None:intergenic 45.0%
! ATTGGTAGTCGTAGTGGTGT+TGG + Chr3:79054091-79054110 MsG0380016092.01.T01:CDS 45.0%
! CCAGATATTGGTAGTCGTAG+TGG + Chr3:79054085-79054104 MsG0380016092.01.T01:CDS 45.0%
! GATACTGGAAGCACAAGTTC+AGG - Chr3:79055736-79055755 None:intergenic 45.0%
! GCTTCTTGGTGATCCTGATT+TGG + Chr3:79054636-79054655 MsG0380016092.01.T01:CDS 45.0%
! GGAGAAGCATATGCAATTGC+AGG + Chr3:79059583-79059602 MsG0380016092.01.T01:CDS 45.0%
! TCCTCCTCTTTTCTCCATCT+AGG - Chr3:79060718-79060737 None:intergenic 45.0%
! TGGTAGTGTTAGTGGTGCTA+AGG + Chr3:79054321-79054340 MsG0380016092.01.T01:CDS 45.0%
!! AGCTTTGAAAGATTCTGGCC+TGG + Chr3:79059153-79059172 MsG0380016092.01.T01:CDS 45.0%
!! GCAAGGTTATGGTTGATAGG+TGG - Chr3:79060183-79060202 None:intergenic 45.0%
!! GCTTTGAAAGATTCTGGCCT+GGG + Chr3:79059154-79059173 MsG0380016092.01.T01:CDS 45.0%
!! GCTTTTCTCGTTTCTGGATC+AGG + Chr3:79054684-79054703 MsG0380016092.01.T01:CDS 45.0%
!! TCGCTTTTCAAGACAGCTTC+TGG + Chr3:79053824-79053843 MsG0380016092.01.T01:CDS 45.0%
!! TTCTGAGGTGAGAACACTGT+GGG - Chr3:79060514-79060533 None:intergenic 45.0%
!! TTTCTGAGGTGAGAACACTG+TGG - Chr3:79060515-79060534 None:intergenic 45.0%
!! TTTTCTTGATGGTAGACCGG+TGG - Chr3:79056287-79056306 None:intergenic 45.0%
!!! ACTCTTTTGAGGCAAAACGC+AGG - Chr3:79055700-79055719 None:intergenic 45.0%
!!! CACCCCTTGAGGTTTTTTTG+TGG + Chr3:79056758-79056777 MsG0380016092.01.T01:intron 45.0%
!!! CTCTTTTGAGGCAAAACGCA+GGG - Chr3:79055699-79055718 None:intergenic 45.0%
AAAACCATTGGGCAGGGCAT+TGG + Chr3:79055056-79055075 MsG0380016092.01.T01:CDS 50.0%
AATAGAAGTAGGAGGGGGTG+AGG - Chr3:79053585-79053604 None:intergenic 50.0%
AATTCCAAACTGCCAGTGGG+AGG + Chr3:79054572-79054591 MsG0380016092.01.T01:CDS 50.0%
ACAAACCGGGAATCAGAGCA+GGG + Chr3:79056403-79056422 MsG0380016092.01.T01:CDS 50.0%
ACCAAAGTCAAAAGGGGAGC+AGG + Chr3:79057985-79058004 MsG0380016092.01.T01:intron 50.0%
ACGCCGATAACAATTACCGG+TGG + Chr3:79053522-79053541 MsG0380016092.01.T01:CDS 50.0%
ACGTGGAAAACCATTGGGCA+GGG + Chr3:79055050-79055069 MsG0380016092.01.T01:CDS 50.0%
ATAGAAGTAGGAGGGGGTGA+GGG - Chr3:79053584-79053603 None:intergenic 50.0%
ATAGCGTCAGGAACTGTCAG+AGG + Chr3:79059561-79059580 MsG0380016092.01.T01:intron 50.0%
ATCTGGGGAGCAGGTTTATG+CGG + Chr3:79056718-79056737 MsG0380016092.01.T01:CDS 50.0%
ATGTCGCTCAGACCTGACAA+TGG - Chr3:79059856-79059875 None:intergenic 50.0%
CACACACATAAGGACTAGGG+GGG - Chr3:79059904-79059923 None:intergenic 50.0%
CAGGTGACATCAGGTAATGC+AGG + Chr3:79055590-79055609 MsG0380016092.01.T01:CDS 50.0%
CAGGTTTATGCGGCTGGAAT+GGG + Chr3:79056728-79056747 MsG0380016092.01.T01:CDS 50.0%
CCATAACCTTGCCGGATCTA+CGG + Chr3:79060191-79060210 MsG0380016092.01.T01:CDS 50.0%
CCGACGCCGATAACAATTAC+CGG + Chr3:79053519-79053538 MsG0380016092.01.T01:CDS 50.0%
CCGGAGTCATATCTGCCATT+AGG - Chr3:79058983-79059002 None:intergenic 50.0%
CCGGCAAGGTTATGGTTGAT+AGG - Chr3:79060186-79060205 None:intergenic 50.0%
CCGGTAATTGTTATCGGCGT+CGG - Chr3:79053522-79053541 None:intergenic 50.0%
CGGTAATTGTTATCGGCGTC+GGG - Chr3:79053521-79053540 None:intergenic 50.0%
CTCCGTGCTGTGTCAATAGA+TGG - Chr3:79055673-79055692 None:intergenic 50.0%
GAGAAGTGAATCATGGCCAC+CGG + Chr3:79056268-79056287 MsG0380016092.01.T01:intron 50.0%
GATGGCTATATAGGGCAACC+TGG + Chr3:79058563-79058582 MsG0380016092.01.T01:intron 50.0%
GCAAGGACATGTCAGTTAGG+TGG + Chr3:79055809-79055828 MsG0380016092.01.T01:intron 50.0%
GCCTAGATGGAGAAAAGAGG+AGG + Chr3:79060714-79060733 MsG0380016092.01.T01:exon 50.0%
GGGTGGGAATAGAAGTAGGA+GGG - Chr3:79053592-79053611 None:intergenic 50.0%
GGTAATTGTTATCGGCGTCG+GGG - Chr3:79053520-79053539 None:intergenic 50.0%
GGTGGGAATAGAAGTAGGAG+GGG - Chr3:79053591-79053610 None:intergenic 50.0%
GTACTGCTCGGTACCAAATG+AGG - Chr3:79055511-79055530 None:intergenic 50.0%
GTCACCTGTCTGGCTGTATT+GGG - Chr3:79055578-79055597 None:intergenic 50.0%
GTGGGAATAGAAGTAGGAGG+GGG - Chr3:79053590-79053609 None:intergenic 50.0%
TAGCGTCAGGAACTGTCAGA+GGG + Chr3:79059562-79059581 MsG0380016092.01.T01:intron 50.0%
TATATAGGGCAACCTGGCCT+TGG + Chr3:79058569-79058588 MsG0380016092.01.T01:intron 50.0%
TCTTGTCCTGGGACCTCATT+TGG + Chr3:79055495-79055514 MsG0380016092.01.T01:intron 50.0%
TGATTACGGCAACAGCGAAG+GGG + Chr3:79058914-79058933 MsG0380016092.01.T01:CDS 50.0%
TGTCACCTGTCTGGCTGTAT+TGG - Chr3:79055579-79055598 None:intergenic 50.0%
TTCTCCCAATACAGCCAGAC+AGG + Chr3:79055571-79055590 MsG0380016092.01.T01:CDS 50.0%
TTGTCAAAGCAACTGGCTGC+TGG + Chr3:79056577-79056596 MsG0380016092.01.T01:CDS 50.0%
! ATATAGGGCAACCTGGCCTT+GGG + Chr3:79058570-79058589 MsG0380016092.01.T01:intron 50.0%
! GCAGCCAGTTGCTTTGACAA+TGG - Chr3:79056577-79056596 None:intergenic 50.0%
! TCTGAGGTGAGAACACTGTG+GGG - Chr3:79060513-79060532 None:intergenic 50.0%
! TTTGTGCAACCAGGTAGTGG+TGG + Chr3:79054526-79054545 MsG0380016092.01.T01:CDS 50.0%
!! ACTTTGAAACGACGCAGCAC+TGG - Chr3:79054017-79054036 None:intergenic 50.0%
!! ATGGGCTAGCAATTCGAGCT+TGG + Chr3:79060556-79060575 MsG0380016092.01.T01:CDS 50.0%
!! TTGGTACTTGGAGGGCACTT+TGG + Chr3:79055929-79055948 MsG0380016092.01.T01:intron 50.0%
!! TTTGAGTCCAGAAGCACCAG+AGG - Chr3:79055351-79055370 None:intergenic 50.0%
!!! TCCTGCTCCCCTTTTGACTT+TGG - Chr3:79057989-79058008 None:intergenic 50.0%
AAACGCGCTAGGAGGCTTCT+TGG + Chr3:79054622-79054641 MsG0380016092.01.T01:CDS 55.0%
ACACATAAGGACTAGGGGGG+CGG - Chr3:79059901-79059920 None:intergenic 55.0%
ACAGCCAGACAGGTGACATC+AGG + Chr3:79055581-79055600 MsG0380016092.01.T01:CDS 55.0%
AGAAGCTTCGGGTAGTGTGC+TGG + Chr3:79056617-79056636 MsG0380016092.01.T01:intron 55.0%
AGCAGCCTGCTAGTGGGAAA+AGG + Chr3:79055121-79055140 MsG0380016092.01.T01:CDS 55.0%
ATGCGTTGAAACGCGCTAGG+AGG + Chr3:79054614-79054633 MsG0380016092.01.T01:CDS 55.0%
CACAAACCGGGAATCAGAGC+AGG + Chr3:79056402-79056421 MsG0380016092.01.T01:CDS 55.0%
CACGTGGAAAACCATTGGGC+AGG + Chr3:79055049-79055068 MsG0380016092.01.T01:CDS 55.0%
CCGTAGATCCGGCAAGGTTA+TGG - Chr3:79060194-79060213 None:intergenic 55.0%
CGTACATGGAAGGAAGGGGA+GGG - Chr3:79053613-79053632 None:intergenic 55.0%
CTGGAACCCAACACAGAAGC+AGG + Chr3:79059270-79059289 MsG0380016092.01.T01:CDS 55.0%
CTTGTATGGCGCTAGACGCT+CGG + Chr3:79058833-79058852 MsG0380016092.01.T01:intron 55.0%
GCAGGTTTATGCGGCTGGAA+TGG + Chr3:79056727-79056746 MsG0380016092.01.T01:CDS 55.0%
GCGTTACTTCTCTGTCTCCC+AGG - Chr3:79059174-79059193 None:intergenic 55.0%
GCTCATTGGGCAGATCGGTT+AGG + Chr3:79056906-79056925 MsG0380016092.01.T01:CDS 55.0%
GGAGGGGTGGGAATAGAAGT+AGG - Chr3:79053596-79053615 None:intergenic 55.0%
GGCGGAGTTTGGTACTTGGA+GGG + Chr3:79055921-79055940 MsG0380016092.01.T01:intron 55.0%
GGGGGGCGGAATTTCTTACT+TGG - Chr3:79059887-79059906 None:intergenic 55.0%
GGGGTGGGAATAGAAGTAGG+AGG - Chr3:79053593-79053612 None:intergenic 55.0%
GTACATGGAAGGAAGGGGAG+GGG - Chr3:79053612-79053631 None:intergenic 55.0%
GTGATGCGTTGAAACGCGCT+AGG + Chr3:79054611-79054630 MsG0380016092.01.T01:CDS 55.0%
GTTAGGGCATGTGAGATGGC+AGG + Chr3:79058260-79058279 MsG0380016092.01.T01:intron 55.0%
TCGGTACCAAATGAGGTCCC+AGG - Chr3:79055504-79055523 None:intergenic 55.0%
TCGTACATGGAAGGAAGGGG+AGG - Chr3:79053614-79053633 None:intergenic 55.0%
TGCCAGCTCCGTCAGAAGAT+GGG + Chr3:79060538-79060557 MsG0380016092.01.T01:CDS 55.0%
TGCTATCCAGCTAGGTGTGC+TGG + Chr3:79056088-79056107 MsG0380016092.01.T01:CDS 55.0%
TGGCGGAGTTTGGTACTTGG+AGG + Chr3:79055920-79055939 MsG0380016092.01.T01:intron 55.0%
TTAGCACCACCACCACTACC+TGG - Chr3:79054538-79054557 None:intergenic 55.0%
! AATTGTTATCGGCGTCGGGG+AGG - Chr3:79053517-79053536 None:intergenic 55.0%
! CTGCTCTGATTCCCGGTTTG+TGG - Chr3:79056404-79056423 None:intergenic 55.0%
!! CGTCGGAGTTGATTTGCCAC+CGG - Chr3:79053541-79053560 None:intergenic 55.0%
AACCGGGAATCAGAGCAGGG+AGG + Chr3:79056406-79056425 MsG0380016092.01.T01:CDS 60.0%
ACGACCTCCCACTGGCAGTT+TGG - Chr3:79054579-79054598 None:intergenic 60.0%
AGCCCATCTTCTGACGGAGC+TGG - Chr3:79060543-79060562 None:intergenic 60.0%
ATGGAAGGAAGGGGAGGGGT+GGG - Chr3:79053608-79053627 None:intergenic 60.0%
CGAGCGTCTAGCGCCATACA+AGG - Chr3:79058835-79058854 None:intergenic 60.0%
CGGAGCTGGCAGCATTTCTG+AGG - Chr3:79060529-79060548 None:intergenic 60.0%
CTGCCAGCTCCGTCAGAAGA+TGG + Chr3:79060537-79060556 MsG0380016092.01.T01:CDS 60.0%
CTGCTCCCCAGATCTGCACA+AGG - Chr3:79056711-79056730 None:intergenic 60.0%
CTTGTGCAGATCTGGGGAGC+AGG + Chr3:79056709-79056728 MsG0380016092.01.T01:intron 60.0%
GTTAAGCTGGTCCCAAGGCC+AGG - Chr3:79058584-79058603 None:intergenic 60.0%
TCCACCAATGCCCTGCCCAA+TGG - Chr3:79055063-79055082 None:intergenic 60.0%
TGCCTCCCTGCTCTGATTCC+CGG - Chr3:79056411-79056430 None:intergenic 60.0%
TGGGCCAGTTTCACCCCTTG+AGG + Chr3:79056747-79056766 MsG0380016092.01.T01:CDS 60.0%
! GGTGTGAGGCGGAAGCATGA+AGG - Chr3:79053643-79053662 None:intergenic 60.0%
! GTGCAACCAGGTAGTGGTGG+TGG + Chr3:79054529-79054548 MsG0380016092.01.T01:CDS 60.0%
!! ACCATTGGGCAGGGCATTGG+TGG + Chr3:79055059-79055078 MsG0380016092.01.T01:CDS 60.0%
CATGGAAGGAAGGGGAGGGG+TGG - Chr3:79053609-79053628 None:intergenic 65.0%
GAAGTAGGAGGGGGTGAGGG+TGG - Chr3:79053581-79053600 None:intergenic 65.0%
GGGGAGCAGGTTTATGCGGC+TGG + Chr3:79056722-79056741 MsG0380016092.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 79053497 79060926 79053497 ID=MsG0380016092.01;Name=MsG0380016092.01
Chr3 mRNA 79053497 79060926 79053497 ID=MsG0380016092.01.T01;Parent=MsG0380016092.01;Name=MsG0380016092.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0.76|0.72|1|1|1|18|207|1175
Chr3 exon 79053497 79053677 79053497 ID=MsG0380016092.01.T01:exon:17751;Parent=MsG0380016092.01.T01
Chr3 exon 79053783 79055240 79053783 ID=MsG0380016092.01.T01:exon:17752;Parent=MsG0380016092.01.T01
Chr3 exon 79055333 79055472 79055333 ID=MsG0380016092.01.T01:exon:17753;Parent=MsG0380016092.01.T01
Chr3 exon 79055569 79055717 79055569 ID=MsG0380016092.01.T01:exon:17754;Parent=MsG0380016092.01.T01
Chr3 exon 79056033 79056155 79056033 ID=MsG0380016092.01.T01:exon:17755;Parent=MsG0380016092.01.T01
Chr3 exon 79056385 79056456 79056385 ID=MsG0380016092.01.T01:exon:17756;Parent=MsG0380016092.01.T01
Chr3 exon 79056546 79056627 79056546 ID=MsG0380016092.01.T01:exon:17757;Parent=MsG0380016092.01.T01
Chr3 exon 79056718 79056768 79056718 ID=MsG0380016092.01.T01:exon:17758;Parent=MsG0380016092.01.T01
Chr3 exon 79056858 79056933 79056858 ID=MsG0380016092.01.T01:exon:17759;Parent=MsG0380016092.01.T01
Chr3 exon 79057028 79057139 79057028 ID=MsG0380016092.01.T01:exon:17760;Parent=MsG0380016092.01.T01
Chr3 exon 79057248 79057319 79057248 ID=MsG0380016092.01.T01:exon:17761;Parent=MsG0380016092.01.T01
Chr3 exon 79058848 79059043 79058848 ID=MsG0380016092.01.T01:exon:17762;Parent=MsG0380016092.01.T01
Chr3 exon 79059115 79059291 79059115 ID=MsG0380016092.01.T01:exon:17763;Parent=MsG0380016092.01.T01
Chr3 exon 79059571 79059707 79059571 ID=MsG0380016092.01.T01:exon:17764;Parent=MsG0380016092.01.T01
Chr3 exon 79059825 79059887 79059825 ID=MsG0380016092.01.T01:exon:17765;Parent=MsG0380016092.01.T01
Chr3 exon 79059999 79060212 79059999 ID=MsG0380016092.01.T01:exon:17766;Parent=MsG0380016092.01.T01
Chr3 exon 79060410 79060577 79060410 ID=MsG0380016092.01.T01:exon:17767;Parent=MsG0380016092.01.T01
Chr3 exon 79060663 79060926 79060663 ID=MsG0380016092.01.T01:exon:17768;Parent=MsG0380016092.01.T01
Chr3 CDS 79053497 79053677 79053497 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79053783 79055240 79053783 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79055333 79055472 79055333 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79055569 79055717 79055569 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79056033 79056155 79056033 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79056385 79056456 79056385 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79056546 79056627 79056546 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79056718 79056768 79056718 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79056858 79056933 79056858 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79057028 79057139 79057028 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79057248 79057319 79057248 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79058848 79059043 79058848 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79059115 79059291 79059115 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79059571 79059707 79059571 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79059825 79059887 79059825 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79059999 79060212 79059999 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79060410 79060577 79060410 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 CDS 79060663 79060719 79060663 ID=MsG0380016092.01.T01:cds;Parent=MsG0380016092.01.T01
Chr3 three_prime_UTR 79060720 79060926 79060720 ID=MsG0380016092.01.T01:three_prime_utr;Parent=MsG0380016092.01.T01
Gene Sequence

>MsG0380016092.01.T01

ATGTCAACATGGAAGATCCTCCCCGACGCCGATAACAATTACCGGTGGCAAATCAACTCCGACGACACTTCAAATGTTATTCCACCCTCACCCCCTCCTACTTCTATTCCCACCCCTCCCCTTCCTTCCATGTACGATCTTCTCCTTCATGCTTCCGCCTCACACCTTTTTCAACCTCAAGAGGAAGCAAATGCAATAGATGATAGTTTTGGCTTTGCGAATTCGCTTTTCAAGACAGCTTCTGGAAGAAAAGTTACTATTTCTTCTAACGGTCTTGTTAGAGCAAAGACGTTATTAGGATTGCATGAAGAAACTGTTGGTGCTAATATTCAAACACCTCAGAATGCTAAGAAATTTAAAGCTTTTCATCAAGACGAACCTCGTTTACAGGTAATAGATAGTTGTAAAAAGACCAGTGCTGCGTCGTTTCAAAGTCCTTTAGTTAGTAGATCCAAAAATGGTTTTCAGAATAAAATTGTGCAACCAGATATTGGTAGTCGTAGTGGTGTTGGTGCTAAGCAAGCTCTGATAAAATTTCAAACTGGTGTTAGTAATATTCAAGCCCCTCAGAATGCTAGTTTTTTTGATGCTTTTGATGAAGAATTGCCTCATTTGCAGCTTATGGATAGTTGTAAAAAGACGAGTGCTGCGTCGTTTCAAAGTCCTTTAGTTGGTAGGTTGAACATGGGTTCTGAGAATAAAGTTGTACAACTTGATAGTGGTAGTGTTAGTGGTGCTAAGGATGCACCAATTAAGTTCCAATCTGTTGTTAGTAATATTCAAACCCCTCAGAATGCTGAAAAATTGCATGCTTTTGATGAAGAATTGCCTCATTTGCAGCTTATGGATAGTTGTAAAATGATGAGTTCCGCGTCATTTCAAAGTCCTTTAGTTGGTACGTTGAAGAATGGTTTTGAGAGTAAATTTGTGCAACCAGGTAGTGGTGGTGGTGCTAAGCAAGCTCCAATTAAATTCCAAACTGCCAGTGGGAGGTCGTTATCTATTTCTGGTGATGCGTTGAAACGCGCTAGGAGGCTTCTTGGTGATCCTGATTTGGGAGATTTCTTTGATGGTGGAGATTCGCTTTTCTCGTTTCTGGATCAGGGACAAACCAGCACAATCACTTCCTCTGTTGAAAGAAGTGAGAGTAAAAATACTCATACCCCTCTGGTACATCAAATGACACTAGAGAATAATCCCAATCACATGACAAAAAGTTTCACATACCCTTTGCAGCCTTCGAAACAAATGGAATTTTCAAATAAGCTTCGCAACGAAGGTAATGGGAATAACTTAATCGTGAAATTCGATGATGTTGTGAATGAAAGTGATTGTGGCCATAAAAGTAGCAAAGCTCCTGGACCGAAACCCTTGTATAACAAGAATGAAGTGGCTGACACGACAATAAAAAGTTCTTCATTGAATGGTTTTTCTTCAAGAATGGATTCACGTGGAAAACCATTGGGCAGGGCATTGGTGGATATTTCCAATACCGTTAAGACAGTCCATACAAATAATAAGCAGCCTGCTAGTGGGAAAAGGAGAATAGGATTAAATGCAACTGTTTCTTCCTTTAAAAAGCCTCGAATTTCCAATATCTCTACCTCTGGTGACCAAGATGTTCAATATTTTTCTAATGATTTGGCTCAATTATCCTCTGGTGCTTCTGGACTCAAAAGAAAGGTTTCTACCCGATATCCATTTCACTATCCAAGGATGCACATCAAGGAATTTTTTGCTGTTCCTCCATTAGAGCAAAAAGTGGTCAGTGTAATCAGTCATTCTCCCAATACAGCCAGACAGGTGACATCAGGTAATGCAGGAGCGTACATATTCCATGATGGCTCTGATAGTAATGGTATGGGAGCAGAAGCTTTCATCCATCTATTGACACAGCACGGAGCTTCCCTGCGTTTTGCCTCAAAAGAGTGGGTCTTGAATCATTACAAATGGATTGTATGGAAACTGGCATGCTATGAGAGATGCTATCCAGCTAGGTGTGCTGGAAAATTTCTGACTGTATCAAACGTGCTTGAGGAACTGAAGTACAGTGGGGCATTATCTGAGCCACAAACCGGGAATCAGAGCAGGGAGGCATTAAAAGTTGAATTAACTGATGGATGGTATTCTATAAATGCCATTTTAGATGTTCCATTGTCAAAGCAACTGGCTGCTGGAAGATTGTTTGTAGGACAGAAGCTTCGGATCTGGGGAGCAGGTTTATGCGGCTGGAATGGGCCAGTTTCACCCCTTGAGGTGTCATCAACAGTTAGTTTACTTCTTCACATAAATGGAACATATAGAGCTCATTGGGCAGATCGGTTAGGACTTTGTAAAGTTGCTGGTCCACCTTTGGCTTTCAAATGCATAAAAAGAAATGGCGGTTTAGTACCTCAAACTTTGGCAGGAATTACCCGAATATATCCCATTCTTTACAAAGAAAGGTTAAGCAGTGGACAATCTGTTGTAATATCAGAGAGGATGGAGAGTAAAATGATGGAGCTGCACAATCAAAGACGCTCGGCTGTTGTAGATAATATTGTTTCGGAGTATCAGAAGGAAATAACTGGTTCGCATATTTATGATTACGGCAACAGCGAAGGGGCTAAGATATATAAGATGCTGGAGACAGCTGCAGAACCCGAATTCCTAATGGCAGATATGACTCCGGAGCAACTTAGTTCTTTTGCTGCTTATAAGGCCAAATTAAATGCAAATAGACAGTCACAAATGGAAAGTTCAATTGAGAAAGCTTTGAAAGATTCTGGCCTGGGAGACAGAGAAGTAACGCCATTTATGAGGTTGCGTGTAGTTGGATTAACTTATAAAACTCAACGACATAAGCCTAAAGAAGGCATAGTAACAATCTGGAACCCAACACAGAAGCAGGAACTGTCAGAGGGAGAAGCATATGCAATTGCAGGACTCATACCATTTGGCTCTGATTCGGATGTCCTTCACTTGCAAACTAGAGGATCTACTACCAAGTGGTTGCCATTATCTTCTAATGCAAAGGAACAGTTTAAGCCATTTTCCAATAATCGGAAATCAATACCATTGTCAGGTCTGAGCGACATCCCACTTTCCAACGAGTTCGATGTTGTTGCATTTGTTGTGCATGTGGGAAAGGTTTATACATCAAGTCAGCAAAAGAAGCAATGGATTTTTGTGACTGATGGATCCATCATGAATGGGTTACAGTCAGGAAAGTTTATCGACACATTGCTTGCCATTTGCTTTTGCTCCCCATTGTTTGATCATGATTCATTTCCACCTATCAACCATAACCTTGCCGGATCTACGGTTGGTTTCTGTAATCTTATAAAAAAAGAGAAGGACCATACAAACCATATATGGGTTGCTGATGCTAATGAAATTTCAACCTATTATTTGAAATTTGATTCCCCACAGTGTTCTCACCTCAGAAATGCTGCCAGCTCCGTCAGAAGATGGGCTAGCAATTCGAGCTTGATAATAGAGAAACTCAAGGAAAAGGTGTTGGGTATAGTTGGTGATTGTAAAGCCTAG
Protein sequence

>MsG0380016092.01.T01

MSTWKILPDADNNYRWQINSDDTSNVIPPSPPPTSIPTPPLPSMYDLLLHASASHLFQPQEEANAIDDSFGFANSLFKTASGRKVTISSNGLVRAKTLLGLHEETVGANIQTPQNAKKFKAFHQDEPRLQVIDSCKKTSAASFQSPLVSRSKNGFQNKIVQPDIGSRSGVGAKQALIKFQTGVSNIQAPQNASFFDAFDEELPHLQLMDSCKKTSAASFQSPLVGRLNMGSENKVVQLDSGSVSGAKDAPIKFQSVVSNIQTPQNAEKLHAFDEELPHLQLMDSCKMMSSASFQSPLVGTLKNGFESKFVQPGSGGGAKQAPIKFQTASGRSLSISGDALKRARRLLGDPDLGDFFDGGDSLFSFLDQGQTSTITSSVERSESKNTHTPLVHQMTLENNPNHMTKSFTYPLQPSKQMEFSNKLRNEGNGNNLIVKFDDVVNESDCGHKSSKAPGPKPLYNKNEVADTTIKSSSLNGFSSRMDSRGKPLGRALVDISNTVKTVHTNNKQPASGKRRIGLNATVSSFKKPRISNISTSGDQDVQYFSNDLAQLSSGASGLKRKVSTRYPFHYPRMHIKEFFAVPPLEQKVVSVISHSPNTARQVTSGNAGAYIFHDGSDSNGMGAEAFIHLLTQHGASLRFASKEWVLNHYKWIVWKLACYERCYPARCAGKFLTVSNVLEELKYSGALSEPQTGNQSREALKVELTDGWYSINAILDVPLSKQLAAGRLFVGQKLRIWGAGLCGWNGPVSPLEVSSTVSLLLHINGTYRAHWADRLGLCKVAGPPLAFKCIKRNGGLVPQTLAGITRIYPILYKERLSSGQSVVISERMESKMMELHNQRRSAVVDNIVSEYQKEITGSHIYDYGNSEGAKIYKMLETAAEPEFLMADMTPEQLSSFAAYKAKLNANRQSQMESSIEKALKDSGLGDREVTPFMRLRVVGLTYKTQRHKPKEGIVTIWNPTQKQELSEGEAYAIAGLIPFGSDSDVLHLQTRGSTTKWLPLSSNAKEQFKPFSNNRKSIPLSGLSDIPLSNEFDVVAFVVHVGKVYTSSQQKKQWIFVTDGSIMNGLQSGKFIDTLLAICFCSPLFDHDSFPPINHNLAGSTVGFCNLIKKEKDHTNHIWVADANEISTYYLKFDSPQCSHLRNAASSVRRWASNSSLIIEKLKEKVLGIVGDCKA*