AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006398.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006398.01.T01 MTR_2g007450 41.457 357 192 7 13 362 14 360 1.12e-77 246
MsG0280006398.01.T01 MTR_3g026920 44.910 334 147 8 14 336 18 325 1.25e-71 229
MsG0280006398.01.T01 MTR_4g098590 39.185 319 156 8 17 328 1 288 1.19e-56 189
MsG0280006398.01.T01 MTR_2g007550 36.119 335 125 8 7 337 6 255 5.98e-50 171
MsG0280006398.01.T01 MTR_5g083890 37.651 332 169 11 15 335 6 310 9.20e-50 175
MsG0280006398.01.T01 MTR_1g053025 35.938 320 168 8 15 325 2 293 2.56e-49 171
MsG0280006398.01.T01 MTR_2g007500 35.758 330 159 8 8 328 4 289 1.55e-47 164
MsG0280006398.01.T01 MTR_1g107385 36.923 325 168 9 15 330 32 328 5.06e-47 166
MsG0280006398.01.T01 MTR_3g107160 34.911 338 163 13 15 339 10 303 3.74e-43 154
MsG0280006398.01.T01 MTR_3g107120 37.427 342 146 15 10 328 4 300 3.20e-42 152
MsG0280006398.01.T01 MTR_3g107100 35.826 321 154 11 15 325 11 289 1.39e-40 148
MsG0280006398.01.T01 MTR_2g007400 35.838 346 167 17 15 340 12 322 1.71e-40 148
MsG0280006398.01.T01 MTR_7g075820 35.119 336 170 13 15 336 6 307 3.62e-40 147
MsG0280006398.01.T01 MTR_2g005990 33.851 322 174 10 14 328 5 294 9.65e-39 143
MsG0280006398.01.T01 MTR_7g083740 31.169 385 169 14 8 369 2 313 2.30e-35 133
MsG0280006398.01.T01 MTR_2g007530 44.693 179 76 5 14 175 18 190 4.15e-35 132
MsG0280006398.01.T01 MTR_2g007530 50.633 79 28 2 250 328 194 261 1.49e-12 68.6
MsG0280006398.01.T01 MTR_2g008320 32.927 328 163 9 15 329 52 335 9.06e-35 133
MsG0280006398.01.T01 MTR_2g008310 32.615 325 164 8 15 329 2 281 1.58e-34 131
MsG0280006398.01.T01 MTR_2g007360 34.139 331 137 13 14 332 11 272 4.04e-33 127
MsG0280006398.01.T01 MTR_7g007340 32.641 337 148 10 1 332 1 263 1.27e-31 123
MsG0280006398.01.T01 MTR_3g099830 32.919 322 147 10 14 327 11 271 1.54e-29 117
MsG0280006398.01.T01 MTR_7g007080 31.940 335 174 13 13 337 2 292 4.04e-25 105
MsG0280006398.01.T01 MTR_7g115270 29.358 327 181 9 15 325 12 304 3.46e-24 103
MsG0280006398.01.T01 MTR_8g085430 36.279 215 100 7 14 217 10 198 1.16e-23 100
MsG0280006398.01.T01 MTR_7g098510 29.310 348 178 12 1 330 1 298 1.52e-23 101
MsG0280006398.01.T01 MTR_5g073420 30.435 322 167 11 15 327 11 284 2.36e-23 100
MsG0280006398.01.T01 MTR_3g036250 30.882 340 145 13 14 330 4 276 8.23e-23 98.6
MsG0280006398.01.T01 MTR_7g098570 29.714 350 185 14 3 340 8 308 2.86e-22 98.6
MsG0280006398.01.T01 MTR_7g056433 31.385 325 164 12 15 325 12 291 1.00e-21 95.9
MsG0280006398.01.T01 MTR_1g041245 28.895 353 180 15 9 341 5 306 1.14e-21 95.9
MsG0280006398.01.T01 MTR_3g108150 32.399 321 162 13 15 325 13 288 1.41e-21 95.5
MsG0280006398.01.T01 MTR_3g105060 28.750 320 181 10 14 330 13 288 2.99e-21 94.4
MsG0280006398.01.T01 MTR_3g023630 29.969 327 171 12 14 330 7 285 9.51e-21 92.8
MsG0280006398.01.T01 MTR_7g114710 30.499 341 151 15 4 330 2 270 3.27e-20 91.3
MsG0280006398.01.T01 MTR_7g056447 35.407 209 107 7 9 215 3 185 5.45e-20 89.7
MsG0280006398.01.T01 MTR_5g082930 51.724 87 39 1 17 100 17 103 1.16e-19 86.7
MsG0280006398.01.T01 MTR_7g032380 34.783 207 107 7 14 217 10 191 1.60e-19 89.4
MsG0280006398.01.T01 MTR_5g058100 29.102 323 176 11 14 325 8 288 5.76e-19 87.8
MsG0280006398.01.T01 MTR_4g039440 30.183 328 166 14 14 325 33 313 1.17e-18 87.4
MsG0280006398.01.T01 MTR_6g045333 29.080 337 181 11 9 328 55 350 1.65e-18 87.0
MsG0280006398.01.T01 MTR_7g007370 36.757 185 93 7 149 330 88 251 1.67e-18 85.9
MsG0280006398.01.T01 MTR_7g056280 38.323 167 83 5 11 175 2 150 2.02e-18 87.4
MsG0280006398.01.T01 MTR_5g061680 28.571 322 155 13 15 327 11 266 2.79e-18 85.1
MsG0280006398.01.T01 MTR_7g098480 29.942 344 169 15 1 325 1 291 4.50e-18 85.9
MsG0280006398.01.T01 MTR_3g040700 29.179 329 165 12 14 330 42 314 4.75e-18 85.5
MsG0280006398.01.T01 MTR_3g467400 31.474 251 133 11 14 247 2 230 6.33e-18 84.7
MsG0280006398.01.T01 MTR_7g055943 29.080 337 166 13 10 325 35 319 8.72e-18 84.7
MsG0280006398.01.T01 MTR_3g107140 36.066 183 83 7 46 217 23 182 1.43e-17 80.9
MsG0280006398.01.T01 MTR_7g032370 28.896 308 149 12 30 325 5 254 2.09e-17 82.8
MsG0280006398.01.T01 MTR_6g044560 33.708 267 147 11 7 253 170 426 2.96e-17 83.6
MsG0280006398.01.T01 MTR_1g085120 29.448 326 173 10 15 325 92 375 3.57e-17 83.2
MsG0280006398.01.T01 MTR_1g085120 29.755 326 172 11 15 325 179 462 4.40e-17 82.8
MsG0280006398.01.T01 MTR_7g026500 28.086 324 186 12 15 327 14 301 4.58e-17 82.4
MsG0280006398.01.T01 MTR_1g085120 29.448 326 173 10 15 325 167 450 4.79e-17 83.2
MsG0280006398.01.T01 MTR_8g062270 28.065 367 184 16 15 327 16 356 8.46e-17 82.0
MsG0280006398.01.T01 MTR_5g008950 27.988 343 160 13 17 337 1 278 8.97e-17 81.3
MsG0280006398.01.T01 MTR_4g032730 31.915 235 119 8 1 219 1 210 9.52e-17 82.0
MsG0280006398.01.T01 MTR_6g044572 31.045 335 158 13 15 325 2 287 1.08e-16 81.3
MsG0280006398.01.T01 MTR_5g058000 29.538 325 162 12 15 325 8 279 1.59e-16 80.5
MsG0280006398.01.T01 MTR_1089s0010 28.049 328 171 12 12 325 5 281 2.44e-16 80.1
MsG0280006398.01.T01 MTR_5g087940 31.760 233 108 9 15 232 26 222 2.73e-16 80.1
MsG0280006398.01.T01 MTR_8g058970 30.000 250 148 8 5 240 2 238 3.14e-16 80.5
MsG0280006398.01.T01 MTR_0492s0020 31.515 330 148 17 15 327 86 354 3.36e-16 80.1
MsG0280006398.01.T01 MTR_0543s0010 31.515 330 148 17 15 327 86 354 4.48e-16 79.7
MsG0280006398.01.T01 MTR_5g045510 30.380 237 134 6 14 246 11 220 5.84e-16 79.0
MsG0280006398.01.T01 MTR_3g052940 30.597 268 121 12 15 249 28 263 8.00e-16 79.0
MsG0280006398.01.T01 MTR_3g052940 30.597 268 121 12 15 249 28 263 8.13e-16 79.0
MsG0280006398.01.T01 MTR_7g088260 27.190 331 169 10 15 327 91 367 8.99e-16 79.0
MsG0280006398.01.T01 MTR_3g052940 30.597 268 121 12 15 249 28 263 1.03e-15 79.0
MsG0280006398.01.T01 MTR_7g034090 36.145 166 77 4 15 175 4 145 1.59e-15 77.8
MsG0280006398.01.T01 MTR_7g056277 26.048 334 189 11 10 333 254 539 2.44e-15 77.8
MsG0280006398.01.T01 MTR_6g022360 28.402 338 147 14 14 325 42 310 3.62e-15 76.6
MsG0280006398.01.T01 MTR_8g058965 30.085 236 118 8 5 217 3 214 6.14e-15 76.3
MsG0280006398.01.T01 MTR_0009s0080 29.467 319 177 10 20 327 23 304 9.87e-15 75.5
MsG0280006398.01.T01 MTR_6g022500 27.134 328 174 9 15 325 101 380 9.92e-15 75.9
MsG0280006398.01.T01 MTR_2g047858 30.137 219 118 8 13 222 113 305 1.13e-14 75.9
MsG0280006398.01.T01 MTR_7g056287 26.727 333 178 12 15 333 3 283 1.59e-14 74.7
MsG0280006398.01.T01 MTR_7g033915 25.749 334 168 14 6 325 2 269 1.89e-14 74.3
MsG0280006398.01.T01 MTR_3g082890 29.275 345 186 13 1 325 81 387 2.21e-14 74.7
MsG0280006398.01.T01 MTR_3g082890 29.275 345 186 13 1 325 1 307 3.06e-14 74.3
MsG0280006398.01.T01 MTR_3g052990 28.625 269 128 10 15 249 28 266 4.69e-14 73.6
MsG0280006398.01.T01 MTR_7g060470 27.616 344 173 13 15 329 3 299 5.02e-14 73.2
MsG0280006398.01.T01 MTR_1g013580 29.167 216 122 7 15 222 19 211 5.85e-14 73.2
MsG0280006398.01.T01 MTR_4g080773 32.911 237 127 11 15 240 19 234 6.38e-14 73.2
MsG0280006398.01.T01 MTR_4g080773 32.911 237 127 11 15 240 19 234 6.46e-14 73.2
MsG0280006398.01.T01 MTR_3g071850 27.679 336 183 12 10 327 19 312 6.80e-14 73.6
MsG0280006398.01.T01 MTR_1g066830 27.139 339 196 11 14 341 7 305 8.04e-14 72.4
MsG0280006398.01.T01 MTR_7g056430 25.904 332 161 11 9 325 3 264 8.81e-14 73.6
MsG0280006398.01.T01 MTR_8g445780 30.734 218 127 8 5 219 3 199 1.01e-13 72.4
MsG0280006398.01.T01 MTR_6g040270 27.596 337 163 14 12 325 5 283 1.03e-13 72.4
MsG0280006398.01.T01 MTR_3g110010 34.722 216 108 9 7 217 2 189 1.04e-13 73.2
MsG0280006398.01.T01 MTR_7g056420 26.205 332 160 11 9 325 3 264 1.14e-13 73.2
MsG0280006398.01.T01 MTR_3g109982 34.722 216 108 9 7 217 2 189 1.21e-13 72.8
MsG0280006398.01.T01 MTR_3g108560 28.743 334 161 14 13 327 18 293 1.31e-13 71.2
MsG0280006398.01.T01 MTR_1g108820 27.507 349 171 17 14 334 7 301 1.63e-13 71.2
MsG0280006398.01.T01 MTR_1g021825 28.571 224 123 8 13 229 15 208 1.89e-13 71.6
MsG0280006398.01.T01 MTR_8g070950 31.330 233 112 11 1 219 1 199 2.03e-13 71.6
MsG0280006398.01.T01 MTR_5g073370 26.380 326 187 12 15 330 5 287 2.61e-13 70.9
MsG0280006398.01.T01 MTR_7g034110 23.497 366 183 12 14 365 10 292 2.69e-13 70.9
MsG0280006398.01.T01 MTR_8g467800 26.542 373 199 15 3 327 8 353 2.75e-13 71.2
MsG0280006398.01.T01 MTR_3g108560 28.657 335 162 14 12 327 17 293 2.85e-13 70.9
MsG0280006398.01.T01 MTR_1g021825 28.571 224 123 8 13 229 86 279 3.72e-13 70.9
MsG0280006398.01.T01 MTR_3g007830 28.897 263 141 12 5 252 2 233 4.40e-13 70.5
MsG0280006398.01.T01 MTR_8g468810 30.804 224 131 7 2 219 12 217 7.25e-13 69.3
MsG0280006398.01.T01 MTR_4g080590 29.630 216 122 7 15 227 23 211 8.72e-13 69.3
MsG0280006398.01.T01 MTR_8g468810 30.804 224 131 7 2 219 12 217 8.89e-13 69.3
MsG0280006398.01.T01 MTR_8g468810 30.804 224 131 7 2 219 12 217 8.91e-13 68.9
MsG0280006398.01.T01 MTR_8g468810 30.804 224 131 7 2 219 12 217 8.91e-13 69.7
MsG0280006398.01.T01 MTR_6g011460 29.412 238 141 5 14 247 45 259 9.27e-13 69.7
MsG0280006398.01.T01 MTR_8g468810 30.804 224 131 7 2 219 12 217 1.01e-12 69.3
MsG0280006398.01.T01 MTR_4g080590 29.630 216 122 7 15 227 23 211 1.20e-12 69.3
MsG0280006398.01.T01 MTR_4g134150 28.986 207 109 8 15 217 14 186 1.39e-12 67.0
MsG0280006398.01.T01 MTR_7g075800 27.139 339 197 15 15 331 9 319 1.86e-12 69.3
MsG0280006398.01.T01 MTR_3g023440 31.429 210 106 8 15 217 3 181 1.88e-12 68.6
MsG0280006398.01.T01 MTR_6g092430 27.149 221 132 7 8 221 3 201 1.89e-12 68.6
MsG0280006398.01.T01 MTR_7g021630 27.426 237 120 9 11 230 13 214 2.01e-12 68.2
MsG0280006398.01.T01 MTR_7g021630 27.426 237 120 9 11 230 13 214 2.38e-12 67.8
MsG0280006398.01.T01 MTR_4g047950 29.798 198 111 7 9 203 7 179 2.40e-12 68.2
MsG0280006398.01.T01 MTR_7g034115 27.446 368 194 17 14 361 10 324 2.45e-12 68.2
MsG0280006398.01.T01 MTR_3g008050 28.571 259 140 11 9 252 5 233 3.19e-12 67.8
MsG0280006398.01.T01 MTR_4g080787 30.290 241 132 10 15 242 19 236 5.05e-12 67.4
MsG0280006398.01.T01 MTR_3g019240 28.205 234 121 10 1 215 12 217 5.57e-12 67.0
MsG0280006398.01.T01 MTR_4g014260 29.560 159 86 4 15 173 26 158 5.59e-12 67.0
MsG0280006398.01.T01 MTR_5g007410 29.503 322 172 13 20 326 31 312 5.64e-12 67.4
MsG0280006398.01.T01 MTR_8g062310 31.801 261 119 14 1 242 1 221 5.91e-12 67.0
MsG0280006398.01.T01 MTR_4g014260 28.649 185 102 6 15 196 26 183 6.63e-12 67.0
MsG0280006398.01.T01 MTR_2g036470 26.420 352 198 12 3 337 2 309 6.67e-12 66.6
MsG0280006398.01.T01 MTR_3g019220 31.285 179 91 8 1 175 12 162 6.86e-12 67.4
MsG0280006398.01.T01 MTR_6g009020 25.714 385 223 18 14 367 15 367 8.05e-12 66.6
MsG0280006398.01.T01 MTR_7g080440 28.365 208 109 8 1 200 1 176 1.03e-11 65.9
MsG0280006398.01.T01 MTR_1g492880 37.273 110 60 4 12 118 3 106 1.10e-11 61.6
MsG0280006398.01.T01 MTR_2g099980 29.694 229 119 10 15 227 38 240 1.20e-11 66.2
MsG0280006398.01.T01 MTR_5g080710 25.070 359 200 11 8 325 26 356 1.72e-11 65.9
MsG0280006398.01.T01 MTR_3g007790 28.235 255 138 11 13 252 23 247 1.74e-11 65.5
MsG0280006398.01.T01 MTR_3g048290 30.918 207 122 5 15 219 23 210 1.81e-11 65.9
MsG0280006398.01.T01 MTR_1g014450 29.817 218 123 10 13 222 14 209 1.82e-11 65.5
MsG0280006398.01.T01 MTR_1g013840 29.208 202 124 8 13 211 54 239 2.62e-11 65.1
MsG0280006398.01.T01 MTR_8g468840 29.911 224 130 6 5 219 4 209 2.69e-11 65.1
MsG0280006398.01.T01 MTR_7g033945 29.592 196 106 8 6 195 2 171 2.72e-11 62.4
MsG0280006398.01.T01 MTR_5g066560 30.097 206 102 9 8 203 2 175 2.78e-11 64.7
MsG0280006398.01.T01 MTR_2g072530 23.014 365 229 12 1 327 1 351 2.98e-11 65.1
MsG0280006398.01.T01 MTR_8g017280 27.888 251 140 11 15 246 36 264 3.56e-11 64.7
MsG0280006398.01.T01 MTR_5g039950 25.798 376 184 15 15 347 23 346 3.65e-11 64.7
MsG0280006398.01.T01 MTR_8g066650 29.665 209 108 9 6 203 64 244 3.66e-11 64.7
MsG0280006398.01.T01 MTR_8g017280 27.888 251 140 11 15 246 36 264 4.87e-11 63.5
MsG0280006398.01.T01 MTR_4g057725 27.953 254 137 10 13 251 20 242 4.89e-11 64.3
MsG0280006398.01.T01 MTR_2g007100 59.091 44 18 0 15 58 2 45 5.20e-11 58.9
MsG0280006398.01.T01 MTR_7g033470 37.778 90 55 1 6 94 5 94 5.60e-11 60.5
MsG0280006398.01.T01 MTR_5g038430 23.864 264 152 9 15 270 96 318 5.82e-11 64.3
MsG0280006398.01.T01 MTR_4g050250 29.482 251 118 10 1 217 1 226 6.41e-11 63.9
MsG0280006398.01.T01 MTR_4g055990 29.796 245 111 10 15 219 9 232 6.81e-11 63.9
MsG0280006398.01.T01 MTR_4g055990 29.796 245 111 10 15 219 9 232 7.98e-11 63.9
MsG0280006398.01.T01 MTR_8g467800 27.642 246 146 9 3 243 8 226 8.72e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006398.01.T01 AT1G16930 29.508 244 134 7 1 233 1 217 2.92e-23 100
MsG0280006398.01.T01 AT1G16930 29.508 244 134 7 1 233 1 217 2.92e-23 100
MsG0280006398.01.T01 AT1G16930 29.508 244 134 7 1 233 1 217 2.92e-23 100
MsG0280006398.01.T01 AT1G60400 27.000 400 205 15 15 367 14 373 3.27e-22 97.4
MsG0280006398.01.T01 AT1G78750 32.328 232 119 9 1 219 1 207 4.52e-20 91.7
MsG0280006398.01.T01 AT1G78750 32.328 232 119 9 1 219 1 207 4.52e-20 91.7
MsG0280006398.01.T01 AT4G14103 33.180 217 113 6 15 224 8 199 7.15e-20 90.5
MsG0280006398.01.T01 AT4G14103 33.180 217 113 6 15 224 8 199 7.15e-20 90.5
MsG0280006398.01.T01 AT4G14103 33.180 217 113 6 15 224 8 199 8.12e-20 90.9
MsG0280006398.01.T01 AT4G14096 31.760 233 125 7 15 240 8 213 3.06e-19 89.4
MsG0280006398.01.T01 AT4G14096 31.760 233 125 7 15 240 8 213 3.06e-19 89.4
MsG0280006398.01.T01 AT1G51370 30.000 230 127 6 13 240 17 214 2.08e-18 85.9
MsG0280006398.01.T01 AT5G22730 29.386 228 134 7 15 240 28 230 2.28e-18 86.3
MsG0280006398.01.T01 AT5G22730 29.386 228 134 7 15 240 28 230 2.31e-18 86.7
MsG0280006398.01.T01 AT5G22730 29.386 228 134 7 15 240 28 230 2.31e-18 86.7
MsG0280006398.01.T01 AT1G69630 30.804 224 126 7 1 219 1 200 2.93e-18 86.3
MsG0280006398.01.T01 AT1G51370 30.000 230 127 6 13 240 17 214 3.46e-18 85.9
MsG0280006398.01.T01 AT1G51370 30.000 230 127 6 13 240 17 214 4.57e-18 85.9
MsG0280006398.01.T01 AT5G22670 31.667 240 132 8 7 243 3 213 6.76e-18 85.1
MsG0280006398.01.T01 AT3G59190 30.556 252 133 10 8 246 5 227 1.49e-17 84.0
MsG0280006398.01.T01 AT1G58310 29.528 254 128 7 12 240 5 232 2.63e-17 83.6
MsG0280006398.01.T01 AT3G59190 30.556 252 133 10 8 246 5 227 2.74e-17 83.6
MsG0280006398.01.T01 AT1G60410 28.270 237 138 9 7 233 2 216 4.83e-17 82.4
MsG0280006398.01.T01 AT1G55660 32.692 208 116 8 15 219 53 239 7.09e-17 81.6
MsG0280006398.01.T01 AT3G58860 25.344 363 199 13 12 327 4 341 8.40e-17 82.0
MsG0280006398.01.T01 AT1G78760 28.992 238 138 9 4 237 5 215 1.37e-16 81.3
MsG0280006398.01.T01 AT1G55660 32.692 208 116 8 15 219 53 239 1.43e-16 81.6
MsG0280006398.01.T01 AT3G58940 31.356 236 134 8 15 240 2 219 6.20e-16 79.7
MsG0280006398.01.T01 AT3G58940 31.356 236 134 8 15 240 2 219 6.20e-16 79.7
MsG0280006398.01.T01 AT4G13985 28.692 237 129 9 1 222 1 212 8.75e-16 79.0
MsG0280006398.01.T01 AT4G26340 27.324 355 202 13 15 338 2 331 1.73e-15 77.8
MsG0280006398.01.T01 AT5G22610 30.568 229 130 8 1 222 1 207 3.25e-15 77.4
MsG0280006398.01.T01 AT3G42770 30.734 218 107 6 20 221 4 193 3.53e-15 77.4
MsG0280006398.01.T01 AT5G22720 26.971 241 145 7 11 248 19 231 3.80e-15 77.0
MsG0280006398.01.T01 AT5G22610 30.568 229 130 8 1 222 1 207 3.84e-15 77.0
MsG0280006398.01.T01 AT3G58960 30.374 214 121 6 15 224 2 191 4.85e-15 76.6
MsG0280006398.01.T01 AT3G26922 31.628 215 115 8 15 227 14 198 7.76e-15 75.1
MsG0280006398.01.T01 AT3G26922 31.628 215 115 8 15 227 14 198 7.76e-15 75.1
MsG0280006398.01.T01 AT3G59150 31.174 247 131 11 1 238 1 217 1.13e-14 75.5
MsG0280006398.01.T01 AT5G53640 31.963 219 103 10 10 219 17 198 1.29e-14 72.8
MsG0280006398.01.T01 AT5G53635 28.696 230 129 9 17 240 2 202 1.57e-14 75.1
MsG0280006398.01.T01 AT5G38396 30.672 238 123 8 15 238 2 211 2.81e-14 74.3
MsG0280006398.01.T01 AT3G59200 28.936 235 133 5 15 240 7 216 3.11e-14 73.6
MsG0280006398.01.T01 AT1G55030 30.734 218 120 6 4 219 8 196 3.51e-14 73.9
MsG0280006398.01.T01 AT3G59200 28.936 235 133 5 15 240 7 216 3.67e-14 74.3
MsG0280006398.01.T01 AT1G66300 27.982 218 125 6 13 228 27 214 5.41e-14 73.6
MsG0280006398.01.T01 AT4G22280 29.439 214 119 6 15 224 2 187 5.97e-14 73.2
MsG0280006398.01.T01 AT5G56410 29.317 249 148 8 23 259 11 243 6.52e-14 73.6
MsG0280006398.01.T01 AT4G22280 29.439 214 119 6 15 224 2 187 7.71e-14 72.4
MsG0280006398.01.T01 AT5G22660 29.907 214 120 6 10 221 8 193 8.09e-14 72.0
MsG0280006398.01.T01 AT1G55030 31.132 212 115 6 10 219 4 186 1.03e-13 72.4
MsG0280006398.01.T01 AT5G22660 29.907 214 120 6 10 221 8 193 1.06e-13 72.4
MsG0280006398.01.T01 AT2G26030 29.384 211 120 6 14 221 3 187 1.09e-13 72.4
MsG0280006398.01.T01 AT2G26030 29.384 211 120 6 14 221 3 187 1.21e-13 72.4
MsG0280006398.01.T01 AT2G26030 29.384 211 120 6 14 221 3 187 1.21e-13 72.4
MsG0280006398.01.T01 AT1G13780 31.019 216 111 10 15 217 10 200 1.36e-13 72.4
MsG0280006398.01.T01 AT5G56380 30.000 220 118 9 15 224 2 195 1.40e-13 72.0
MsG0280006398.01.T01 AT5G56380 30.000 220 118 9 15 224 2 195 1.40e-13 72.0
MsG0280006398.01.T01 AT3G50710 30.288 208 120 5 15 219 2 187 1.63e-13 72.0
MsG0280006398.01.T01 AT1G13780 31.019 216 111 10 15 217 10 200 1.70e-13 71.2
MsG0280006398.01.T01 AT4G13965 31.944 216 115 7 14 226 9 195 2.15e-13 71.6
MsG0280006398.01.T01 AT3G59160 30.579 242 126 8 5 222 3 226 2.44e-13 71.6
MsG0280006398.01.T01 AT4G13960 28.839 267 137 8 15 273 2 223 3.44e-13 71.2
MsG0280006398.01.T01 AT4G13960 28.839 267 137 8 15 273 2 223 3.44e-13 71.2
MsG0280006398.01.T01 AT1G80470 22.691 379 211 12 1 327 1 349 3.59e-13 70.9
MsG0280006398.01.T01 AT4G26350 30.622 209 114 7 15 219 2 183 3.67e-13 70.9
MsG0280006398.01.T01 AT5G41840 28.033 239 138 6 14 238 13 231 3.84e-13 71.2
MsG0280006398.01.T01 AT5G02930 27.966 236 120 7 14 240 27 221 5.08e-13 70.5
MsG0280006398.01.T01 AT5G18780 28.947 228 129 7 6 231 2 198 6.50e-13 70.1
MsG0280006398.01.T01 AT5G18780 28.947 228 129 7 6 231 2 198 6.50e-13 70.1
MsG0280006398.01.T01 AT5G38390 32.536 209 110 8 15 222 2 180 7.81e-13 70.1
MsG0280006398.01.T01 AT5G18780 28.947 228 129 7 6 231 2 198 8.34e-13 69.7
MsG0280006398.01.T01 AT5G18780 28.947 228 129 7 6 231 2 198 8.34e-13 69.7
MsG0280006398.01.T01 AT3G44060 31.416 226 124 9 20 238 4 205 9.14e-13 69.7
MsG0280006398.01.T01 AT5G38392 30.837 227 117 11 15 226 2 203 1.16e-12 67.0
MsG0280006398.01.T01 AT3G58930 28.000 250 148 8 15 254 2 229 1.41e-12 69.3
MsG0280006398.01.T01 AT3G58930 28.000 250 148 8 15 254 2 229 1.41e-12 69.3
MsG0280006398.01.T01 AT3G58930 28.000 250 148 8 15 254 2 229 1.41e-12 69.3
MsG0280006398.01.T01 AT5G38590 30.131 229 119 12 15 237 2 195 1.44e-12 68.2
MsG0280006398.01.T01 AT3G62430 29.907 214 114 10 15 219 2 188 1.50e-12 68.9
MsG0280006398.01.T01 AT5G02920 27.236 246 131 8 11 250 24 227 1.62e-12 67.4
MsG0280006398.01.T01 AT5G38590 30.131 229 119 12 15 237 2 195 2.16e-12 68.6
MsG0280006398.01.T01 AT1G64540 32.381 210 103 9 17 223 7 180 2.41e-12 68.6
MsG0280006398.01.T01 AT1G64540 32.381 210 103 9 17 223 7 180 2.41e-12 68.6
MsG0280006398.01.T01 AT1G78730 26.840 231 109 8 1 219 1 183 2.62e-12 68.2
MsG0280006398.01.T01 AT3G58920 26.190 252 127 10 15 241 2 219 3.37e-12 68.2
MsG0280006398.01.T01 AT4G15060 30.638 235 132 9 12 240 169 378 4.07e-12 67.8
MsG0280006398.01.T01 AT5G44940 25.210 357 209 12 13 360 3 310 4.24e-12 67.4
MsG0280006398.01.T01 AT4G10400 28.986 207 121 6 15 219 2 184 4.52e-12 67.4
MsG0280006398.01.T01 AT4G10400 28.986 207 121 6 15 219 2 184 4.52e-12 67.4
MsG0280006398.01.T01 AT4G10400 28.986 207 121 6 15 219 2 184 4.52e-12 67.4
MsG0280006398.01.T01 AT5G41830 29.224 219 130 6 15 224 13 215 8.25e-12 67.0
MsG0280006398.01.T01 AT3G59240 28.251 223 122 9 15 226 8 203 8.42e-12 67.0
MsG0280006398.01.T01 AT5G44960 28.638 213 124 8 13 221 3 191 1.32e-11 65.9
MsG0280006398.01.T01 AT3G03030 30.702 228 122 9 15 230 2 205 1.52e-11 65.5
MsG0280006398.01.T01 AT1G52650 29.464 224 125 8 15 230 2 200 1.52e-11 65.9
MsG0280006398.01.T01 AT3G03030 30.702 228 122 9 15 230 2 205 1.58e-11 65.9
MsG0280006398.01.T01 AT5G22700 30.698 215 111 8 14 222 42 224 1.73e-11 65.9
MsG0280006398.01.T01 AT4G15060 30.342 234 132 9 13 240 24 232 1.86e-11 65.5
MsG0280006398.01.T01 AT3G44810 30.252 238 126 10 17 243 9 217 2.36e-11 65.5
MsG0280006398.01.T01 AT5G22700 30.698 215 111 8 14 222 5 187 2.96e-11 65.1
MsG0280006398.01.T01 AT5G22700 30.698 215 111 8 14 222 5 187 2.96e-11 65.1
MsG0280006398.01.T01 AT5G22700 30.698 215 111 8 14 222 5 187 2.96e-11 65.1
MsG0280006398.01.T01 AT5G22700 30.698 215 111 8 14 222 5 187 2.96e-11 65.1
MsG0280006398.01.T01 AT4G09920 28.780 205 120 6 15 217 2 182 2.98e-11 63.9
MsG0280006398.01.T01 AT4G09920 28.780 205 120 6 15 217 2 182 2.98e-11 63.9
MsG0280006398.01.T01 AT4G09920 28.780 205 120 6 15 217 2 182 2.98e-11 63.9
MsG0280006398.01.T01 AT5G22700 30.698 215 111 8 14 222 42 224 3.32e-11 65.1
MsG0280006398.01.T01 AT2G29910 28.986 207 117 5 15 219 29 207 3.53e-11 64.7
MsG0280006398.01.T01 AT2G29910 28.986 207 117 5 15 219 5 183 4.58e-11 63.9
MsG0280006398.01.T01 AT2G29910 28.986 207 117 5 15 219 5 183 4.58e-11 63.9
MsG0280006398.01.T01 AT2G29910 28.986 207 117 5 15 219 5 183 4.74e-11 63.9
MsG0280006398.01.T01 AT2G29910 28.986 207 117 5 15 219 5 183 4.74e-11 63.9
MsG0280006398.01.T01 AT2G29910 28.986 207 117 5 15 219 5 183 4.74e-11 63.9
MsG0280006398.01.T01 AT2G29910 28.986 207 117 5 15 219 5 183 4.74e-11 63.9
MsG0280006398.01.T01 AT4G09920 28.780 205 120 6 15 217 2 182 5.78e-11 63.5
MsG0280006398.01.T01 AT4G09920 28.780 205 120 6 15 217 2 182 5.78e-11 63.5
MsG0280006398.01.T01 AT4G00320 29.224 219 130 8 15 224 13 215 9.06e-11 63.5

Find 72 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAGTTACGGTTAGGGTTT+TGG 0.239548 2:+1327593 None:intergenic
TTGATAGATTTGATGACTTT+GGG 0.259041 2:+1327235 None:intergenic
CCAAATTCATCCGACGAAAA+AGG 0.263436 2:+1327034 None:intergenic
ACTTCAAACTTTCAAATATC+AGG 0.263863 2:-1325903 MsG0280006398.01.T01:intron
GATGTTGTCGATTTCGATAT+TGG 0.280545 2:+1327405 None:intergenic
TTTGGGGAAACCGAACTTAT+AGG 0.290891 2:+1327252 None:intergenic
TTGAGTGATGTTGACTTTGA+TGG 0.303214 2:-1326986 MsG0280006398.01.T01:CDS
TATTTGAAAGTTTGAAGTTT+GGG 0.321648 2:+1325908 None:intergenic
ATATTTGAAAGTTTGAAGTT+TGG 0.346231 2:+1325907 None:intergenic
ATTGATAGATTTGATGACTT+TGG 0.348020 2:+1327234 None:intergenic
GCTTGTTCTAACAGCTTGTT+TGG 0.351755 2:+1327468 None:intergenic
GGGTAGTGTGTGAGGGGAGT+GGG 0.354272 2:+1327621 None:intergenic
CAAGCGTTCTTTCAAAGAAA+TGG 0.359121 2:-1327450 MsG0280006398.01.T01:CDS
AAAGTAGGAATTTCAACATA+TGG 0.361528 2:+1325998 None:intergenic
TCCATTGTACAGTTACGGTT+AGG 0.363575 2:+1327586 None:intergenic
TCTTCGTCTCAATCTCAATA+TGG 0.366013 2:-1327185 MsG0280006398.01.T01:CDS
TTGAACTGCAAAACCCTTGT+TGG 0.371584 2:-1327091 MsG0280006398.01.T01:CDS
AATGTCAGATCCTCAAGAAT+TGG 0.372085 2:+1326935 None:intergenic
AAATCGACAACATCTTTATC+TGG 0.374497 2:-1327396 MsG0280006398.01.T01:CDS
TTGGTAAAGTCAAAGAAATT+AGG 0.377895 2:-1325125 MsG0280006398.01.T01:CDS
ATGTTGTCGATTTCGATATT+GGG 0.379185 2:+1327406 None:intergenic
TGAATCTGTTATTTATTTGA+AGG 0.384074 2:+1327371 None:intergenic
GCTCCACCATACTGCTCATT+TGG 0.386637 2:-1325954 MsG0280006398.01.T01:CDS
CCATTGTACAGTTACGGTTA+GGG 0.408935 2:+1327587 None:intergenic
CAAAGAAATGGACCAATCTC+TGG 0.409610 2:-1327438 MsG0280006398.01.T01:CDS
TGGGTAGTGTGTGAGGGGAG+TGG 0.411403 2:+1327620 None:intergenic
TCTTCTCCATTGTACAGTTA+CGG 0.424838 2:+1327581 None:intergenic
TTATTTCAAATATGCTACTC+TGG 0.429035 2:-1326914 MsG0280006398.01.T01:CDS
GGATGTTGGGTAGTGTGTGA+GGG 0.435921 2:+1327614 None:intergenic
AAGTTTGAAGTTTGGGGCAG+TGG 0.438991 2:+1325915 None:intergenic
CAAACAATATGAGGCTCTGC+TGG 0.440720 2:-1325178 MsG0280006398.01.T01:CDS
CTAATAGCTCAAACAATATG+AGG 0.445958 2:-1325187 MsG0280006398.01.T01:intron
TGTGTTGATAATGTAGTGTT+TGG 0.451036 2:-1325144 MsG0280006398.01.T01:CDS
TGGATGTTGGGTAGTGTGTG+AGG 0.457029 2:+1327613 None:intergenic
TAGGTCAAATTATGAAAAGT+AGG 0.474008 2:+1325983 None:intergenic
GGGAACAGAGAGCCAGAGAT+TGG 0.494759 2:+1327426 None:intergenic
AGCGAACGTCGAGGGATAAA+CGG 0.498342 2:+1327293 None:intergenic
AACACGGCGGCGACGGAGAG+AGG 0.504173 2:-1327551 MsG0280006398.01.T01:CDS
ACGAAGAAACACGGCGGCGA+CGG 0.504484 2:-1327558 MsG0280006398.01.T01:CDS
TAACAGCTTGTTTGGTGGTG+AGG 0.508671 2:+1327476 None:intergenic
ATCTGGATGTCCAATTCTTG+AGG 0.515038 2:-1326945 MsG0280006398.01.T01:CDS
GAATTTCAACATATGGGCGC+AGG 0.515131 2:+1326005 None:intergenic
AAGTAGGAATTTCAACATAT+GGG 0.515162 2:+1325999 None:intergenic
GATCAATAGCAGAAGCAGTT+GGG 0.520362 2:+1325067 None:intergenic
GTACTACCAAATGAGCAGTA+TGG 0.522383 2:+1325948 None:intergenic
TATTTCAAATATGCTACTCT+GGG 0.522852 2:-1326913 MsG0280006398.01.T01:CDS
TGATCAATAGCAGAAGCAGT+TGG 0.545414 2:+1325066 None:intergenic
TGATAGATTTGATGACTTTG+GGG 0.549708 2:+1327236 None:intergenic
GATGTTGGGTAGTGTGTGAG+GGG 0.551532 2:+1327615 None:intergenic
TGTTCTAACAGCTTGTTTGG+TGG 0.556868 2:+1327471 None:intergenic
AATTTCAACATATGGGCGCA+GGG 0.563978 2:+1326006 None:intergenic
GAGAGGCTGACAGACTAAGC+AGG 0.583333 2:-1327534 MsG0280006398.01.T01:CDS
TGGTGAGGAAAGAGAGGATG+CGG 0.588500 2:+1327491 None:intergenic
GTTTGGTGGTGAGGAAAGAG+AGG 0.588574 2:+1327485 None:intergenic
TAAACGGTGGAAAGGAGTAC+CGG 0.605738 2:+1327309 None:intergenic
CCCTAACCGTAACTGTACAA+TGG 0.611777 2:-1327587 MsG0280006398.01.T01:exon
ATTTGAAAGTTTGAAGTTTG+GGG 0.622893 2:+1325909 None:intergenic
TCGAGGGATAAACGGTGGAA+AGG 0.624437 2:+1327301 None:intergenic
AGTATGGTGGAGCTTCAAGT+AGG 0.642266 2:+1325964 None:intergenic
GACAGAGATCTAAACCAACA+AGG 0.643252 2:+1327077 None:intergenic
CTACCAAATGAGCAGTATGG+TGG 0.648845 2:+1325951 None:intergenic
TTGATCTCTCGAGACAACGC+CGG 0.649423 2:-1327328 MsG0280006398.01.T01:CDS
CCGAACTTATAGGCAAAACG+AGG 0.649619 2:+1327262 None:intergenic
TGGAGAAGAACGAAGAAACA+CGG 0.654670 2:-1327567 MsG0280006398.01.T01:CDS
GCTAGCGTAGCGAACGTCGA+GGG 0.667444 2:+1327285 None:intergenic
ACAGAGATCTAAACCAACAA+GGG 0.669356 2:+1327078 None:intergenic
GGCTAGCGTAGCGAACGTCG+AGG 0.672833 2:+1327284 None:intergenic
ATTTCAACATATGGGCGCAG+GGG 0.691715 2:+1326007 None:intergenic
CGAACTTATAGGCAAAACGA+GGG 0.718499 2:+1327263 None:intergenic
GAACGTCGAGGGATAAACGG+TGG 0.718908 2:+1327296 None:intergenic
GTTGTCTCGAGAGATCAACA+TGG 0.797098 2:+1327333 None:intergenic
AGAAGAACGAAGAAACACGG+CGG 0.817928 2:-1327564 MsG0280006398.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTTAAGTTATTAAATGT+AGG + Chr2:1326480-1326499 None:intergenic 15.0%
!! AAGATAGTGATAAAAAAAAT+TGG - Chr2:1326933-1326952 MsG0280006398.01.T01:CDS 15.0%
!! AGATAGTGATAAAAAAAATT+GGG - Chr2:1326934-1326953 MsG0280006398.01.T01:CDS 15.0%
!! CAATGTATATTATTCAATTA+AGG + Chr2:1326566-1326585 None:intergenic 15.0%
!! TCTTATAAATAAAGTGATAT+GGG - Chr2:1326312-1326331 MsG0280006398.01.T01:intron 15.0%
!!! AAGTTTTATCGTATTATTAT+TGG - Chr2:1326494-1326513 MsG0280006398.01.T01:intron 15.0%
!!! ATCTGTTATTGTTTTTTATA+GGG + Chr2:1326118-1326137 None:intergenic 15.0%
!!! TTTGTTATTGTTTTTTATAG+AGG - Chr2:1326406-1326425 MsG0280006398.01.T01:intron 15.0%
!! AGAAAGACATTAACAAATTA+GGG + Chr2:1326633-1326652 None:intergenic 20.0%
!! CATATGATTGATTACATTTA+AGG - Chr2:1326042-1326061 MsG0280006398.01.T01:intron 20.0%
!! GTCTTATAAATAAAGTGATA+TGG - Chr2:1326311-1326330 MsG0280006398.01.T01:intron 20.0%
!! TATTATGTGTACAATAAACA+GGG - Chr2:1326893-1326912 MsG0280006398.01.T01:CDS 20.0%
!! TTATTATGTGTACAATAAAC+AGG - Chr2:1326892-1326911 MsG0280006398.01.T01:CDS 20.0%
!!! AATTTTGCTTTGTTTTTATC+TGG - Chr2:1325718-1325737 MsG0280006398.01.T01:intron 20.0%
!!! ATATTTGAAAGTTTGAAGTT+TGG + Chr2:1326776-1326795 None:intergenic 20.0%
!!! GATCTGTTATTGTTTTTTAT+AGG + Chr2:1326119-1326138 None:intergenic 20.0%
!!! TATTTGAAAGTTTGAAGTTT+GGG + Chr2:1326775-1326794 None:intergenic 20.0%
!!! TCTGTTATTGTTTTTTATAG+GGG + Chr2:1326117-1326136 None:intergenic 20.0%
!!! TGAATCTGTTATTTATTTGA+AGG + Chr2:1325312-1325331 None:intergenic 20.0%
!!! TTAAGGATTAATTGCATTTT+TGG - Chr2:1326059-1326078 MsG0280006398.01.T01:intron 20.0%
!!! TTTTTATCACTATCTTTGTA+AGG + Chr2:1326929-1326948 None:intergenic 20.0%
! AAAGTAGGAATTTCAACATA+TGG + Chr2:1326685-1326704 None:intergenic 25.0%
! AAGTAGGAATTTCAACATAT+GGG + Chr2:1326684-1326703 None:intergenic 25.0%
! ACTTCAAACTTTCAAATATC+AGG - Chr2:1326777-1326796 MsG0280006398.01.T01:CDS 25.0%
! ATTATGTGTACAATAAACAG+GGG - Chr2:1326894-1326913 MsG0280006398.01.T01:CDS 25.0%
! CAGAAAGACATTAACAAATT+AGG + Chr2:1326634-1326653 None:intergenic 25.0%
! GTAAGATTGTAATGTTTAGA+GGG - Chr2:1326272-1326291 MsG0280006398.01.T01:intron 25.0%
! TAGGTCAAATTATGAAAAGT+AGG + Chr2:1326700-1326719 None:intergenic 25.0%
! TAGTGATAAAAAAAATTGGG+TGG - Chr2:1326937-1326956 MsG0280006398.01.T01:CDS 25.0%
! TATTTCAAATATGCTACTCT+GGG - Chr2:1325767-1325786 MsG0280006398.01.T01:intron 25.0%
! TTATTTCAAATATGCTACTC+TGG - Chr2:1325766-1325785 MsG0280006398.01.T01:intron 25.0%
! TTGGTAAAGTCAAAGAAATT+AGG - Chr2:1327555-1327574 MsG0280006398.01.T01:CDS 25.0%
!! ATAAGCTCAAGTTTTTAAAC+TGG + Chr2:1325804-1325823 None:intergenic 25.0%
!! ATTGATAGATTTGATGACTT+TGG + Chr2:1325449-1325468 None:intergenic 25.0%
!! ATTTGAAAGTTTGAAGTTTG+GGG + Chr2:1326774-1326793 None:intergenic 25.0%
!! TAAGCTCAAGTTTTTAAACT+GGG + Chr2:1325803-1325822 None:intergenic 25.0%
!! TAGGTTATCTTCTTTTCTAA+AGG - Chr2:1327574-1327593 MsG0280006398.01.T01:exon 25.0%
!! TGTGACTTTCTATTTTCTTT+GGG - Chr2:1326239-1326258 MsG0280006398.01.T01:intron 25.0%
!! TTGATAGATTTGATGACTTT+GGG + Chr2:1325448-1325467 None:intergenic 25.0%
!!! AATTTAAGAGTTTTGAGTGA+GGG + Chr2:1325676-1325695 None:intergenic 25.0%
!!! ATTCATCTTCTTTTTTCTCT+GGG - Chr2:1326599-1326618 MsG0280006398.01.T01:intron 25.0%
AAACAACAAACAGAACAGAA+AGG + Chr2:1326873-1326892 None:intergenic 30.0%
AAATCGACAACATCTTTATC+TGG - Chr2:1325284-1325303 MsG0280006398.01.T01:intron 30.0%
ACCTTAAAACTTGCACTATT+AGG - Chr2:1326993-1327012 MsG0280006398.01.T01:CDS 30.0%
ACTTTGTCAAAATTGGTATG+GGG + Chr2:1326175-1326194 None:intergenic 30.0%
AGAAAATAGAAAGTCACACA+TGG + Chr2:1326237-1326256 None:intergenic 30.0%
CGTAAGATTGTAATGTTTAG+AGG - Chr2:1326271-1326290 MsG0280006398.01.T01:intron 30.0%
CTAATAGCTCAAACAATATG+AGG - Chr2:1327493-1327512 MsG0280006398.01.T01:CDS 30.0%
GACTTTGTCAAAATTGGTAT+GGG + Chr2:1326176-1326195 None:intergenic 30.0%
TGACTTTGTCAAAATTGGTA+TGG + Chr2:1326177-1326196 None:intergenic 30.0%
TGTCTTTCTGTGTAATATAG+AGG - Chr2:1326644-1326663 MsG0280006398.01.T01:intron 30.0%
TTACAAACCATGAAAATCTC+CGG - Chr2:1327079-1327098 MsG0280006398.01.T01:CDS 30.0%
! ACCTAATAGTGCAAGTTTTA+AGG + Chr2:1326997-1327016 None:intergenic 30.0%
! GTATCATAATCTTGCGATTT+TGG + Chr2:1326109-1326090 None:intergenic 30.0%
! GTGACTTTCTATTTTCTTTG+GGG - Chr2:1326240-1326259 MsG0280006398.01.T01:intron 30.0%
! GTGTGACTTTCTATTTTCTT+TGG - Chr2:1326238-1326257 MsG0280006398.01.T01:intron 30.0%
! TGACTTTCTATTTTCTTTGG+GGG - Chr2:1326241-1326260 MsG0280006398.01.T01:intron 30.0%
! TGATAGATTTGATGACTTTG+GGG + Chr2:1325447-1325466 None:intergenic 30.0%
! TTGCAGTTCAAGATAGTTTT+AGG + Chr2:1325580-1325599 None:intergenic 30.0%
! TTTGCTAACATAAGTTGACT+TGG + Chr2:1327034-1327053 None:intergenic 30.0%
!! ATGTTGTCGATTTCGATATT+GGG + Chr2:1325277-1325296 None:intergenic 30.0%
!! TGTGTTGATAATGTAGTGTT+TGG - Chr2:1327536-1327555 MsG0280006398.01.T01:CDS 30.0%
!!! CAATTTAAGAGTTTTGAGTG+AGG + Chr2:1325677-1325696 None:intergenic 30.0%
!!! GATTCATCTTCTTTTTTCTC+TGG - Chr2:1326598-1326617 MsG0280006398.01.T01:intron 30.0%
!!! TTCATCTTCTTTTTTCTCTG+GGG - Chr2:1326600-1326619 MsG0280006398.01.T01:intron 30.0%
AATGTCAGATCCTCAAGAAT+TGG + Chr2:1325748-1325767 None:intergenic 35.0%
ACAGAGATCTAAACCAACAA+GGG + Chr2:1325605-1325624 None:intergenic 35.0%
CAAGCGTTCTTTCAAAGAAA+TGG - Chr2:1325230-1325249 MsG0280006398.01.T01:intron 35.0%
CGCAAGATTATGATACTTAG+AGG - Chr2:1326436-1326455 MsG0280006398.01.T01:intron 35.0%
CGCAAGATTATGATACTTAG+AGG + Chr2:1326455-1326436 None:intergenic 35.0%
CTACGACGAAATCAAAAACA+AGG - Chr2:1325945-1325964 MsG0280006398.01.T01:CDS 35.0%
TCCGACGAAAAAGGAAAATT+CGG + Chr2:1325640-1325659 None:intergenic 35.0%
TCTTCGTCTCAATCTCAATA+TGG - Chr2:1325495-1325514 MsG0280006398.01.T01:intron 35.0%
TCTTCTCCATTGTACAGTTA+CGG + Chr2:1325102-1325121 None:intergenic 35.0%
TGAGCTATTAGAACAATCTG+AGG + Chr2:1327484-1327503 None:intergenic 35.0%
TGCACTATTAGGTACTATGA+GGG - Chr2:1327004-1327023 MsG0280006398.01.T01:CDS 35.0%
TTGCACTATTAGGTACTATG+AGG - Chr2:1327003-1327022 MsG0280006398.01.T01:CDS 35.0%
! ACCAATACCTATCCATTTTC+TGG - Chr2:1327399-1327418 MsG0280006398.01.T01:CDS 35.0%
! CCAATACCTATCCATTTTCT+GGG - Chr2:1327400-1327419 MsG0280006398.01.T01:CDS 35.0%
! TGTAGGCTTAATTGCAGTTT+TGG + Chr2:1326463-1326482 None:intergenic 35.0%
!! GATGTTGTCGATTTCGATAT+TGG + Chr2:1325278-1325297 None:intergenic 35.0%
!! TGCGTTGACTTTGTCAAAAT+TGG + Chr2:1326182-1326201 None:intergenic 35.0%
!! TTGAGTGATGTTGACTTTGA+TGG - Chr2:1325694-1325713 MsG0280006398.01.T01:intron 35.0%
!!! TTCACTTTTTCCACTTTCAC+CGG + Chr2:1327101-1327120 None:intergenic 35.0%
AATTTCAACATATGGGCGCA+GGG + Chr2:1326677-1326696 None:intergenic 40.0%
ACATACAAGTGCCCAGAAAA+TGG + Chr2:1327414-1327433 None:intergenic 40.0%
AGACATTGTGGAACAGATTC+TGG + Chr2:1326965-1326984 None:intergenic 40.0%
AGGTGCGATAAAAGACATTG+TGG + Chr2:1326977-1326996 None:intergenic 40.0%
ATCTGGATGTCCAATTCTTG+AGG - Chr2:1325735-1325754 MsG0280006398.01.T01:intron 40.0%
ATGAAAATCTCCGGTGAAAG+TGG - Chr2:1327088-1327107 MsG0280006398.01.T01:CDS 40.0%
CAAAAGTTGACATGTTGCAG+AGG + Chr2:1327143-1327162 None:intergenic 40.0%
CAAAGAAATGGACCAATCTC+TGG - Chr2:1325242-1325261 MsG0280006398.01.T01:intron 40.0%
CACCTCACTTTAAGTGATGT+GGG + Chr2:1326214-1326233 None:intergenic 40.0%
CCAAATTCATCCGACGAAAA+AGG + Chr2:1325649-1325668 None:intergenic 40.0%
CCATTGTACAGTTACGGTTA+GGG + Chr2:1325096-1325115 None:intergenic 40.0%
CCCAGAAAATGGATAGGTAT+TGG + Chr2:1327403-1327422 None:intergenic 40.0%
CCGACGAAAAAGGAAAATTC+GGG + Chr2:1325639-1325658 None:intergenic 40.0%
CGAACTTATAGGCAAAACGA+GGG + Chr2:1325420-1325439 None:intergenic 40.0%
GAACCCAGTCAAAATTGGTT+CGG - Chr2:1326345-1326364 MsG0280006398.01.T01:intron 40.0%
GACAGAGATCTAAACCAACA+AGG + Chr2:1325606-1325625 None:intergenic 40.0%
GATCAATAGCAGAAGCAGTT+GGG + Chr2:1327616-1327635 None:intergenic 40.0%
GCAAAAGGGGTAAACTTAGA+GGG - Chr2:1326379-1326398 MsG0280006398.01.T01:intron 40.0%
GCAGGTAGCATAGAGAAATT+AGG + Chr2:1327189-1327208 None:intergenic 40.0%
GTACTACCAAATGAGCAGTA+TGG + Chr2:1326735-1326754 None:intergenic 40.0%
GTAGAAGCTAAAGAAACAGC+AGG + Chr2:1327207-1327226 None:intergenic 40.0%
TCAACATATCTGTGTCGTGT+CGG - Chr2:1326519-1326538 MsG0280006398.01.T01:intron 40.0%
TCCATTGTACAGTTACGGTT+AGG + Chr2:1325097-1325116 None:intergenic 40.0%
TGACAAAGTCAACGCATACT+TGG - Chr2:1326186-1326205 MsG0280006398.01.T01:intron 40.0%
TGATCAATAGCAGAAGCAGT+TGG + Chr2:1327617-1327636 None:intergenic 40.0%
TGCAAAAGGGGTAAACTTAG+AGG - Chr2:1326378-1326397 MsG0280006398.01.T01:intron 40.0%
TGGAGAAGAACGAAGAAACA+CGG - Chr2:1325113-1325132 MsG0280006398.01.T01:CDS 40.0%
TTGAACTGCAAAACCCTTGT+TGG - Chr2:1325589-1325608 MsG0280006398.01.T01:intron 40.0%
TTTGGGGAAACCGAACTTAT+AGG + Chr2:1325431-1325450 None:intergenic 40.0%
! AACCCAGTCAAAATTGGTTC+GGG - Chr2:1326346-1326365 MsG0280006398.01.T01:intron 40.0%
! ACTTTCACCGGAGATTTTCA+TGG + Chr2:1327089-1327108 None:intergenic 40.0%
! ATGCGGCAAAGAACGTTTTT+CGG + Chr2:1325175-1325194 None:intergenic 40.0%
! CCTCGTTTTGCCTATAAGTT+CGG - Chr2:1325418-1325437 MsG0280006398.01.T01:intron 40.0%
! GCTTGTTCTAACAGCTTGTT+TGG + Chr2:1325215-1325234 None:intergenic 40.0%
! GTTTACCCCTTTTGCACTTT+TGG + Chr2:1326374-1326393 None:intergenic 40.0%
! GTTTACGCCTTTTGCACTTT+TGG - Chr2:1326149-1326168 MsG0280006398.01.T01:intron 40.0%
! TACAGTTACGGTTAGGGTTT+TGG + Chr2:1325090-1325109 None:intergenic 40.0%
! TGTTCTAACAGCTTGTTTGG+TGG + Chr2:1325212-1325231 None:intergenic 40.0%
!! CCCGAATTTTCCTTTTTCGT+CGG - Chr2:1325636-1325655 MsG0280006398.01.T01:intron 40.0%
!! CCTTTTTCGTCGGATGAATT+TGG - Chr2:1325646-1325665 MsG0280006398.01.T01:intron 40.0%
AGAACCACCAAATCTAGCAG+TGG + Chr2:1327234-1327253 None:intergenic 45.0%
AGAAGAACGAAGAAACACGG+CGG - Chr2:1325116-1325135 MsG0280006398.01.T01:CDS 45.0%
ATTTCAACATATGGGCGCAG+GGG + Chr2:1326676-1326695 None:intergenic 45.0%
CAAACAATATGAGGCTCTGC+TGG - Chr2:1327502-1327521 MsG0280006398.01.T01:CDS 45.0%
CAACATATCTGTGTCGTGTC+GGG - Chr2:1326520-1326539 MsG0280006398.01.T01:intron 45.0%
CAAGTGCCCAGAAAATGGAT+AGG + Chr2:1327409-1327428 None:intergenic 45.0%
CAATAACAGATCAGCCGTCT+AGG - Chr2:1326127-1326146 MsG0280006398.01.T01:intron 45.0%
CACCCACATCACTTAAAGTG+AGG - Chr2:1326209-1326228 MsG0280006398.01.T01:intron 45.0%
CCCTAACCGTAACTGTACAA+TGG - Chr2:1325093-1325112 MsG0280006398.01.T01:CDS 45.0%
CCGAACTTATAGGCAAAACG+AGG + Chr2:1325421-1325440 None:intergenic 45.0%
CGTGTGAACCCAGTCAAAAT+TGG - Chr2:1326340-1326359 MsG0280006398.01.T01:intron 45.0%
CTACCAAATGAGCAGTATGG+TGG + Chr2:1326732-1326751 None:intergenic 45.0%
CTGACTATGAGCTGTTGTGA+AGG - Chr2:1327252-1327271 MsG0280006398.01.T01:CDS 45.0%
GAATTTCAACATATGGGCGC+AGG + Chr2:1326678-1326697 None:intergenic 45.0%
GCACCTCACTTTAAGTGATG+TGG + Chr2:1326215-1326234 None:intergenic 45.0%
GTTGTCTCGAGAGATCAACA+TGG + Chr2:1325350-1325369 None:intergenic 45.0%
TACCATGCCACTGCTAGATT+TGG - Chr2:1327224-1327243 MsG0280006398.01.T01:CDS 45.0%
TGACATGTTGCAGAGGCTTT+CGG + Chr2:1327136-1327155 None:intergenic 45.0%
! AAGTTTGAAGTTTGGGGCAG+TGG + Chr2:1326768-1326787 None:intergenic 45.0%
! AGTATGGTGGAGCTTCAAGT+AGG + Chr2:1326719-1326738 None:intergenic 45.0%
! GCAAAAGGCGTAAACCTAGA+CGG + Chr2:1326144-1326163 None:intergenic 45.0%
! TAAACGGTGGAAAGGAGTAC+CGG + Chr2:1325374-1325393 None:intergenic 45.0%
! TATGGGGCCAAAAGTGCAAA+AGG + Chr2:1326159-1326178 None:intergenic 45.0%
!! TAACAGCTTGTTTGGTGGTG+AGG + Chr2:1325207-1325226 None:intergenic 45.0%
!!! ACGGTTAGGGTTTTGGATGT+TGG + Chr2:1325083-1325102 None:intergenic 45.0%
!!! CACCCGAACCAATTTTGACT+GGG + Chr2:1326351-1326370 None:intergenic 45.0%
!!! CGGTTAGGGTTTTGGATGTT+GGG + Chr2:1325082-1325101 None:intergenic 45.0%
!! TTATTAAAAATAAAACATAA+AGG + Chr2:1326849-1326868 None:intergenic 5.0%
AGCGAACGTCGAGGGATAAA+CGG + Chr2:1325390-1325409 None:intergenic 50.0%
CACCAAATCTAGCAGTGGCA+TGG + Chr2:1327229-1327248 None:intergenic 50.0%
CATGCCACTGCTAGATTTGG+TGG - Chr2:1327227-1327246 MsG0280006398.01.T01:CDS 50.0%
GATGTTGGGTAGTGTGTGAG+GGG + Chr2:1325068-1325087 None:intergenic 50.0%
GCTCCACCATACTGCTCATT+TGG - Chr2:1326726-1326745 MsG0280006398.01.T01:intron 50.0%
GGATGTTGGGTAGTGTGTGA+GGG + Chr2:1325069-1325088 None:intergenic 50.0%
TCGAGGGATAAACGGTGGAA+AGG + Chr2:1325382-1325401 None:intergenic 50.0%
TGCAGAGGCTTTCGGACATT+CGG + Chr2:1327128-1327147 None:intergenic 50.0%
TGGATGTTGGGTAGTGTGTG+AGG + Chr2:1325070-1325089 None:intergenic 50.0%
TGGTGAGGAAAGAGAGGATG+CGG + Chr2:1325192-1325211 None:intergenic 50.0%
TTGATCTCTCGAGACAACGC+CGG - Chr2:1325352-1325371 MsG0280006398.01.T01:intron 50.0%
! CGGGTGCCAAAAGTGCAAAA+GGG - Chr2:1326365-1326384 MsG0280006398.01.T01:intron 50.0%
! GGGTGCCAAAAGTGCAAAAG+GGG - Chr2:1326366-1326385 MsG0280006398.01.T01:intron 50.0%
! TCGGGTGCCAAAAGTGCAAA+AGG - Chr2:1326364-1326383 MsG0280006398.01.T01:intron 50.0%
!! GCACCCGAACCAATTTTGAC+TGG + Chr2:1326352-1326371 None:intergenic 50.0%
!! GTTTGGTGGTGAGGAAAGAG+AGG + Chr2:1325198-1325217 None:intergenic 50.0%
GAACGTCGAGGGATAAACGG+TGG + Chr2:1325387-1325406 None:intergenic 55.0%
GAGAGGCTGACAGACTAAGC+AGG - Chr2:1325146-1325165 MsG0280006398.01.T01:CDS 55.0%
GGGAACAGAGAGCCAGAGAT+TGG + Chr2:1325257-1325276 None:intergenic 55.0%
ACGAAGAAACACGGCGGCGA+CGG - Chr2:1325122-1325141 MsG0280006398.01.T01:CDS 60.0%
GCTAGCGTAGCGAACGTCGA+GGG + Chr2:1325398-1325417 None:intergenic 60.0%
GGCTAGCGTAGCGAACGTCG+AGG + Chr2:1325399-1325418 None:intergenic 65.0%
AACACGGCGGCGACGGAGAG+AGG - Chr2:1325129-1325148 MsG0280006398.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 1325062 1327640 1325062 ID=MsG0280006398.01;Name=MsG0280006398.01
Chr2 mRNA 1325062 1327640 1325062 ID=MsG0280006398.01.T01;Parent=MsG0280006398.01;Name=MsG0280006398.01.T01;_AED=0.45;_eAED=0.46;_QI=50|0.5|0.66|1|0|0|3|0|376
Chr2 exon 1325062 1325202 1325062 ID=MsG0280006398.01.T01:exon:98;Parent=MsG0280006398.01.T01
Chr2 exon 1325904 1326038 1325904 ID=MsG0280006398.01.T01:exon:97;Parent=MsG0280006398.01.T01
Chr2 exon 1326736 1327640 1326736 ID=MsG0280006398.01.T01:exon:96;Parent=MsG0280006398.01.T01
Chr2 five_prime_UTR 1327591 1327640 1327591 ID=MsG0280006398.01.T01:five_prime_utr;Parent=MsG0280006398.01.T01
Chr2 CDS 1326736 1327590 1326736 ID=MsG0280006398.01.T01:cds;Parent=MsG0280006398.01.T01
Chr2 CDS 1325904 1326038 1325904 ID=MsG0280006398.01.T01:cds;Parent=MsG0280006398.01.T01
Chr2 CDS 1325062 1325202 1325062 ID=MsG0280006398.01.T01:cds;Parent=MsG0280006398.01.T01
Gene Sequence

>MsG0280006398.01.T01

ATGGAGAAGAACGAAGAAACACGGCGGCGACGGAGAGAGGCTGACAGACTAAGCAGGTTACCGAAAAACGTTCTTTGCCGCATCCTCTCTTTCCTCACCACCAAACAAGCTGTTAGAACAAGCGTTCTTTCAAAGAAATGGACCAATCTCTGGCTCTCTGTTCCCAATATCGAAATCGACAACATCTTTATCTGGAACCTTCAAATAAATAACAGATTCAACAACTTTCTCAATTCCATGTTGATCTCTCGAGACAACGCCGGTACTCCTTTCCACCGTTTATCCCTCGACGTTCGCTACGCTAGCCCTCGTTTTGCCTATAAGTTCGGTTTCCCCAAAGTCATCAAATCTATCAATTTTGCACTTAAACGCAATCTTGAATATCTTCGTCTCAATCTCAATATGGATGATTTTGATGACTTTGATAATGAGTACGATGTTAATGAACGCTTTTTATTCAAATTGCCTAAAACTATCTTGAACTGCAAAACCCTTGTTGGTTTAGATCTCTGTCACTACACTATCCCGAATTTTCCTTTTTCGTCGGATGAATTTGGATTTCCCTCACTCAAAACTCTTAAATTGAGTGATGTTGACTTTGATGGAAATTTTGCTTTGTTTTTATCTGGATGTCCAATTCTTGAGGATCTGACATTATTTCAAATATGCTACTCTGGGAATAATTATACCCAGTTTAAAAACTTGAGCTTATCGAAATTGATTAAAGCTGATATTGATGACTGTTCGTGTGACTCTTTTGCGCTGCATGCACTTTCTACTGCTGAGTCTCTGTGCTTAGATACATTCAAGAAGCACACACAAGAACGTGAAGTCTACGACGAAATCAAAAACAAGAGGCTTCATCCCCTGCGCCCATATGTTGAAATTCCTACTTTTCATAATTTGACCTACTTGAAGCTCCACCATACTGCTCATTTGGTAGTACAAATTCTTCACCACTGCCCCAAACTTCAAACTTTCAAATATCAGCTCAAACAATATGAGGCTCTGCTGGAAAAAAATCTTTGTGTTGATAATGTAGTGTTTGGTAAAGTCAAAGAAATTAGGTTATCTTCTTTTCTAAAGGATACTCTACATGCTTACCCAACTGCTTCTGCTATTGATCACTGA

Protein sequence

>MsG0280006398.01.T01

MEKNEETRRRRREADRLSRLPKNVLCRILSFLTTKQAVRTSVLSKKWTNLWLSVPNIEIDNIFIWNLQINNRFNNFLNSMLISRDNAGTPFHRLSLDVRYASPRFAYKFGFPKVIKSINFALKRNLEYLRLNLNMDDFDDFDNEYDVNERFLFKLPKTILNCKTLVGLDLCHYTIPNFPFSSDEFGFPSLKTLKLSDVDFDGNFALFLSGCPILEDLTLFQICYSGNNYTQFKNLSLSKLIKADIDDCSCDSFALHALSTAESLCLDTFKKHTQEREVYDEIKNKRLHPLRPYVEIPTFHNLTYLKLHHTAHLVVQILHHCPKLQTFKYQLKQYEALLEKNLCVDNVVFGKVKEIRLSSFLKDTLHAYPTASAIDH*